digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 368 1208 368 1208 0 ",
		bb="0,0,1208,368",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
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	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 305 8 360 1200 360 1200 305 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 348 0 84 15 -Workflow Inputs ",
			bb="8,305,1200,360",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,350.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		reference	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16.5 313.5 16.5 332.5 79.5 332.5 79.5 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 48 320.5 0 47 9 -reference ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=reference,
			pos="48,323",
			rects="16.5,313.5,79.5,332.5",
			width=0.875];
		normal_bam	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 948 313.5 948 332.5 1026 332.5 1026 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 987 320.5 0 62 10 -normal_bam ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=normal_bam,
			pos="987,323",
			rects="948,313.5,1026,332.5",
			width=1.0833];
		scatter_count	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1030.5 313.5 1030.5 332.5 1113.5 332.5 1113.5 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1072 320.5 0 67 13 -scatter_count ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=scatter_count,
			pos="1072,323",
			rects="1030.5,313.5,1113.5,332.5",
			width=1.1528];
		max_alt_allele_in_normal_fraction	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 83.5 313.5 83.5 332.5 268.5 332.5 268.5 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 176 320.5 0 169 33 -max_alt_allele_in_normal_fraction ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=max_alt_allele_in_normal_fraction,
			pos="176,323",
			rects="83.5,313.5,268.5,332.5",
			width=2.5694];
		tumor_bam	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 585.5 313.5 585.5 332.5 658.5 332.5 658.5 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 622 320.5 0 57 9 -tumor_bam ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=tumor_bam,
			pos="622,323",
			rects="585.5,313.5,658.5,332.5",
			width=1.0139];
		max_alt_alleles_in_normal_count	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 273 313.5 273 332.5 453 332.5 453 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 363 320.5 0 164 31 -max_alt_alleles_in_normal_count ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=max_alt_alleles_in_normal_count,
			pos="363,323",
			rects="273,313.5,453,332.5",
			width=2.5];
		panel_of_normals_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 457 313.5 457 332.5 581 332.5 581 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 519 320.5 0 108 20 -panel_of_normals_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=panel_of_normals_vcf,
			pos="519,323",
			rects="457,313.5,581,332.5",
			width=1.7222];
		cosmic_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 662.5 313.5 662.5 332.5 733.5 332.5 733.5 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 698 320.5 0 55 10 -cosmic_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=cosmic_vcf,
			pos="698,323",
			rects="662.5,313.5,733.5,332.5",
			width=0.98611];
		interval_list	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1118 313.5 1118 332.5 1192 332.5 1192 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1155 320.5 0 58 13 -interval_list ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=interval_list,
			pos="1155,323",
			rects="1118,313.5,1192,332.5",
			width=1.0278];
		dbsnp_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 738 313.5 738 332.5 804 332.5 804 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 771 320.5 0 50 9 -dbsnp_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=dbsnp_vcf,
			pos="771,323",
			rects="738,313.5,804,332.5",
			width=0.91667];
		artifact_detection_mode	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 808 313.5 808 332.5 944 332.5 944 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 876 320.5 0 120 23 -artifact_detection_mode ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=artifact_detection_mode,
			pos="876,323",
			rects="808,313.5,944,332.5",
			width=1.8889];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 104 8 104 63 279 63 279 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 158 15 0 92 16 -Workflow Outputs ",
			bb="104,8,279,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="158,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		unfiltered_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 112.5 35.5 112.5 54.5 195.5 54.5 195.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 154 42.5 0 67 14 -unfiltered_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=unfiltered_vcf,
			pos="154,45",
			rects="112.5,35.5,195.5,54.5",
			width=1.1528];
		filtered_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 199.5 35.5 199.5 54.5 270.5 54.5 270.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 235 42.5 0 55 12 -filtered_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=filtered_vcf,
			pos="235,45",
			rects="199.5,35.5,270.5,54.5",
			width=0.98611];
	}
	filter	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 162.5 80.5 162.5 99.5 263.5 99.5 263.5 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 213 87.5 0 85 18 -fp_filter workflow ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="fp_filter workflow",
		pos="213,90",
		rects="162.5,80.5,263.5,99.5",
		width=1.4028];
	reference -> filter	[_draw_="c 7 -#000000 B 10 62.46 313.54 80.49 302.48 109 283.08 109 271 109 271 109 271 109 134 109 111.09 130.81 100.15 154.46 95.01 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 154.61 97.48 161.04 93.77 153.7 92.66 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 129 200.6 0 40 9 -reference ",
		label=reference,
		lp="129,202.5",
		pos="e,162.52,93.487 62.456,313.54 80.495,302.48 109,283.08 109,271 109,271 109,271 109,134 109,111.09 130.81,100.15 154.46,95.014"];
	mutect	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 571 215.5 571 234.5 683 234.5 683 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 627 222.5 0 96 18 -mutect2 (GATK 3.6) ",
		height=0.27778,
		label="mutect2 (GATK 3.6)",
		pos="627,225",
		rects="571,215.5,683,234.5",
		width=1.5556];
	reference -> mutect	[_draw_="c 7 -#000000 B 16 63.75 313.56 69.67 310.59 76.54 307.4 83 305 95.93 300.19 100.11 301.92 113 297 146.98 284.02 151.88 272.6 186 \
260 216.03 248.91 224.31 247.53 256 243 362.79 227.73 488.45 225.16 562.71 225.21 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 562.54 227.66 569.55 225.22 562.55 222.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 206 268.1 0 40 9 -reference ",
		label=reference,
		lp="206,270",
		pos="e,571.06,225.23 63.748,313.56 69.675,310.59 76.543,307.4 83,305 95.932,300.19 100.11,301.92 113,297 146.98,284.02 151.88,272.6 186,\
260 216.03,248.91 224.31,247.53 256,243 362.79,227.73 488.45,225.16 562.71,225.21"];
	normal_bam -> mutect	[_draw_="c 7 -#000000 B 7 981.54 313.83 971.81 300.04 950.03 272.44 924 260 884.15 240.96 766.02 232.21 691.31 228.48 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 691.49 226.04 684.38 228.15 691.25 230.93 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 977.5 268.1 0 51 10 -normal_bam ",
		label=normal_bam,
		lp="977.5,270",
		pos="e,682.87,228.07 981.54,313.83 971.81,300.04 950.03,272.44 924,260 884.15,240.96 766.02,232.21 691.31,228.48"];
	split_interval_list	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1021.5 260.5 1021.5 279.5 1122.5 279.5 1122.5 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1072 267.5 0 85 19 -split_interval_list ",
		height=0.27778,
		label=split_interval_list,
		pos="1072,270",
		rects="1021.5,260.5,1122.5,279.5",
		width=1.4028];
	scatter_count -> split_interval_list	[_draw_="c 7 -#000000 B 4 1072 313.58 1072 306.52 1072 296.24 1072 287.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1074.45 287.78 1072 280.78 1069.55 287.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1100 290.6 0 56 13 -scatter_count ",
		label=scatter_count,
		lp="1100,292.5",
		pos="e,1072,279.26 1072,313.58 1072,306.52 1072,296.24 1072,287.55"];
	max_alt_allele_in_normal_fraction -> mutect	[_draw_="c 7 -#000000 B 10 189.77 313.51 201.08 305.92 216.85 293.89 227 280 232.65 272.27 227.35 265.76 235 260 260.54 240.77 458.3 231.49 \
562.78 227.88 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 562.63 230.34 569.55 227.65 562.47 225.44 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 303.5 268.1 0 137 33 -max_alt_allele_in_normal_fraction ",
		label=max_alt_allele_in_normal_fraction,
		lp="303.5,270",
		pos="e,571.06,227.6 189.77,313.51 201.08,305.92 216.85,293.89 227,280 232.65,272.27 227.35,265.76 235,260 260.54,240.77 458.3,231.49 \
562.78,227.88"];
	tumor_bam -> filter	[_draw_="c 7 -#000000 B 16 602.23 313.58 575.32 302.08 530.12 282.56 527 280 518.62 273.11 522.33 265.55 513 260 455.33 225.71 213 293.09 \
213 226 213 226 213 226 213 134 213 125.31 213 115.63 213 107.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 215.45 107.76 213 100.76 210.55 107.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 222.5 200.6 0 19 3 -bam ",
		label=bam,
		lp="222.5,202.5",
		pos="e,213,99.243 602.23,313.58 575.32,302.08 530.12,282.56 527,280 518.62,273.11 522.33,265.55 513,260 455.33,225.71 213,293.09 213,\
226 213,226 213,226 213,134 213,125.31 213,115.63 213,107.65"];
	tumor_bam -> mutect	[_draw_="c 7 -#000000 B 4 622.43 313.82 623.24 298.17 625.04 263.71 626.12 242.91 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 628.56 243.07 626.48 235.95 623.67 242.81 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 648 268.1 0 46 9 -tumor_bam ",
		label=tumor_bam,
		lp="648,270",
		pos="e,626.56,234.44 622.43,313.82 623.24,298.17 625.04,263.71 626.12,242.91"];
	max_alt_alleles_in_normal_count -> mutect	[_draw_="c 7 -#000000 B 7 363.92 313.61 365.88 299.99 371.82 273.27 389 260 415.42 239.59 501.76 231.41 562.81 228.15 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 562.87 230.6 569.74 227.8 562.63 225.7 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 455.5 268.1 0 133 31 -max_alt_alleles_in_normal_count ",
		label=max_alt_alleles_in_normal_count,
		lp="455.5,270",
		pos="e,571.25,227.72 363.92,313.61 365.88,299.99 371.82,273.27 389,260 415.42,239.59 501.76,231.41 562.81,228.15"];
	panel_of_normals_vcf -> mutect	[_draw_="c 7 -#000000 B 7 518.83 313.65 519.02 300.57 521.29 275.18 535 260 544.54 249.44 557.66 242.15 571.01 237.12 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 571.61 239.5 577.43 234.91 570.02 234.87 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 579 268.1 0 88 20 -panel_of_normals_vcf ",
		label=panel_of_normals_vcf,
		lp="579,270",
		pos="e,578.86,234.41 518.83,313.65 519.02,300.57 521.29,275.18 535,260 544.54,249.44 557.66,242.15 571.01,237.12"];
	cosmic_vcf -> mutect	[_draw_="c 7 -#000000 B 7 696.01 313.66 692.68 301.04 685.03 276.78 672 260 665.62 251.78 656.78 244.53 648.63 238.86 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 650.46 237.13 643.27 235.31 647.76 241.22 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 705.5 268.1 0 45 10 -cosmic_vcf ",
		label=cosmic_vcf,
		lp="705.5,270",
		pos="e,642.01,234.48 696.01,313.66 692.68,301.04 685.03,276.78 672,260 665.62,251.78 656.78,244.53 648.63,238.86"];
	interval_list -> split_interval_list	[_draw_="c 7 -#000000 B 7 1150.57 313.5 1146.11 305.77 1138.54 294.58 1129 288 1126.13 286.02 1123.03 284.27 1119.8 282.72 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1120.9 280.52 1113.5 280.04 1118.98 285.03 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1161.5 290.6 0 47 13 -interval_list ",
		label=interval_list,
		lp="1161.5,292.5",
		pos="e,1112.1,279.45 1150.6,313.5 1146.1,305.77 1138.5,294.58 1129,288 1126.1,286.02 1123,284.27 1119.8,282.72"];
	dbsnp_vcf -> mutect	[_draw_="c 7 -#000000 B 7 767.62 313.9 761.71 300.72 748.27 274.61 729 260 714.94 249.34 697.35 241.92 680.76 236.79 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 681.58 234.48 674.17 234.88 680.21 239.19 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 768 268.1 0 42 9 -dbsnp_vcf ",
		label=dbsnp_vcf,
		lp="768,270",
		pos="e,672.72,234.46 767.62,313.9 761.71,300.72 748.27,274.61 729,260 714.94,249.34 697.35,241.92 680.76,236.79"];
	artifact_detection_mode -> mutect	[_draw_="c 7 -#000000 B 7 867.24 313.75 852.51 300.33 821.28 273.91 790 260 758.84 246.15 721.79 237.84 690.89 232.91 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 691.55 230.54 684.26 231.9 690.81 235.38 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 873 268.1 0 100 23 -artifact_detection_mode ",
		label=artifact_detection_mode,
		lp="873,270",
		pos="e,682.76,231.67 867.24,313.75 852.51,300.33 821.28,273.91 790,260 758.84,246.15 721.79,237.84 690.89,232.91"];
	filter -> unfiltered_vcf	[_draw_="c 7 -#000000 B 4 201.34 80.5 193.1 74.5 181.88 66.32 172.43 59.43 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 173.96 57.51 166.86 55.37 171.07 61.47 ",
		pos="e,165.63,54.478 201.34,80.505 193.1,74.497 181.88,66.32 172.43,59.435"];
	filter -> filtered_vcf	[_draw_="c 7 -#000000 B 4 217.24 80.71 219.98 75.36 223.63 68.22 226.91 61.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 229.07 62.96 230.08 55.61 224.71 60.73 ",
		pos="e,230.77,54.265 217.24,80.709 219.98,75.355 223.63,68.217 226.91,61.807"];
	split_interval_list -> mutect	[_draw_="c 7 -#000000 B 7 1041.51 260.61 1018.48 254.64 986 246.99 957 243 865.17 230.35 757.79 226.9 691.07 226.07 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 691.28 223.62 684.25 225.99 691.23 228.52 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1027.5 245.6 0 47 13 -interval_list ",
		label=interval_list,
		lp="1027.5,247.5",
		pos="e,682.74,225.98 1041.5,260.61 1018.5,254.64 986,246.99 957,243 865.17,230.35 757.79,226.9 691.07,226.07"];
	index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 314 125.5 314 144.5 376 144.5 376 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 345 132.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="345,135",
		rects="314,125.5,376,144.5",
		width=0.86111];
	index -> filter	[_draw_="c 7 -#000000 B 4 318.92 125.5 298.31 118.79 269.38 109.37 246.96 102.06 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 247.88 99.79 240.46 99.95 246.36 104.44 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 296.5 110.6 0 13 3 -vcf ",
		label=vcf,
		lp="296.5,112.5",
		pos="e,239.02,99.478 318.92,125.5 298.31,118.79 269.38,109.37 246.96,102.06"];
	merge	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 407 170.5 407 189.5 473 189.5 473 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 440 177.5 0 50 9 -vcf merge ",
		height=0.27778,
		label="vcf merge",
		pos="440,180",
		rects="407,170.5,473,189.5",
		width=0.91667];
	mutect -> merge	[_draw_="c 7 -#000000 B 4 590.05 215.5 558.56 208.26 513.34 197.86 480.79 190.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 481.65 188.06 474.28 188.88 480.55 192.84 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 558.5 200.6 0 17 4 -vcfs ",
		label=vcfs,
		lp="558.5,202.5",
		pos="e,472.8,188.54 590.05,215.5 558.56,208.26 513.34,197.86 480.79,190.38"];
	merge -> index	[_draw_="c 7 -#000000 B 4 421.23 170.5 406.92 164.03 387.03 155.02 371.16 147.84 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 372.5 145.76 365.11 145.1 370.48 150.22 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 407.5 155.6 0 13 3 -vcf ",
		label=vcf,
		lp="407.5,157.5",
		pos="e,363.73,144.48 421.23,170.5 406.92,164.03 387.03,155.02 371.16,147.84"];
}