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		label=sample_name,
		lp="130,202.5",
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		label=ribosomal_intervals,
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		label=min_readlength,
		lp="757,247.5",
		pos="e,743.6,234.46 682.22,268.51 693.79,264.58 706.55,259.16 717,252 721.42,248.98 720.45,245.81 725,243 728.38,240.91 732.01,239.08 \
735.76,237.47"];
	strand -> stringtie	[_draw_="c 7 -#000000 B 7 256.1 268.91 257.77 254.32 259.98 222.83 252 198 246.25 180.13 233.8 162.55 224.12 150.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 226.18 149.34 219.79 145.58 222.44 152.51 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 267.5 200.6 0 27 6 -strand ",
		label=strand,
		lp="267.5,202.5",
		pos="e,218.81,144.43 256.1,268.91 257.77,254.32 259.98,222.83 252,198 246.25,180.13 233.8,162.55 224.12,150.7"];
	strand -> kallisto	[_draw_="c 7 -#000000 B 13 265.82 268.65 270.78 265.31 276.9 261.83 283 260 328.79 246.26 451.02 260.86 498 252 527.83 246.37 599.12 219.02 \
627 207 668.87 188.96 715.62 163.52 742.26 148.5 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 743.34 150.7 748.22 145.12 740.92 146.44 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 659.5 200.6 0 27 6 -strand ",
		label=strand,
		lp="659.5,202.5",
		pos="e,749.53,144.37 265.82,268.65 270.78,265.31 276.9,261.83 283,260 328.79,246.26 451.02,260.86 498,252 527.83,246.37 599.12,219.02 \
627,207 668.87,188.96 715.62,163.52 742.26,148.5"];
	strand -> generate_qc_metrics	[_draw_="c 7 -#000000 B 10 266.38 268.53 302.78 241.95 420.5 159.91 532 125 597.72 104.43 617.55 115.48 686 108 712.68 105.08 741.92 101.91 \
767.85 99.1 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 767.95 101.56 774.65 98.37 767.42 96.69 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 437.5 178.1 0 27 6 -strand ",
		label=strand,
		lp="437.5,180",
		pos="e,776.15,98.207 266.38,268.53 302.78,241.95 420.5,159.91 532,125 597.72,104.43 617.55,115.48 686,108 712.68,105.08 741.92,101.91 \
767.85,99.105"];
	strand -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 13 265.82 268.64 270.77 265.29 276.89 261.81 283 260 309.75 252.05 508.73 263.83 534 252 538.85 249.73 537.2 245.36 \
542 243 553.28 237.46 606.01 233.42 659.77 230.68 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 659.67 233.14 666.54 230.34 659.43 228.24 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 555.5 245.6 0 27 6 -strand ",
		label=strand,
		lp="555.5,247.5",
		pos="e,668.05,230.26 265.82,268.64 270.77,265.29 276.89,261.81 283,260 309.75,252.05 508.73,263.83 534,252 538.85,249.73 537.2,245.36 \
542,243 553.28,237.46 606.01,233.42 659.77,230.68"];
	read_group_fields -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 7 782.66 268.61 785.46 263.94 788.56 257.89 790 252 790.73 249.01 790.93 245.77 790.83 242.62 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 793.29 242.51 790.11 235.81 788.41 243.03 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 826.5 245.6 0 73 17 -read_group_fields ",
		label=read_group_fields,
		lp="826.5,247.5",
		pos="e,789.95,234.3 782.66,268.61 785.46,263.94 788.56,257.89 790,252 790.73,249.01 790.93,245.77 790.83,242.62"];
	transcript_to_gene	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 914.5 80.5 914.5 99.5 1057.5 99.5 1057.5 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 986 87.5 0 127 26 -Kallisto: TranscriptToGene ",
		height=0.27778,
		label="Kallisto: TranscriptToGene",
		pos="986,90",
		rects="914.5,80.5,1057.5,99.5",
		width=1.9861];
	gene_transcript_lookup_table -> transcript_to_gene	[_draw_="c 7 -#000000 B 13 1753.71 268.65 1734.15 261.07 1712 247.7 1712 226 1712 226 1712 226 1712 134 1712 87.65 1656.9 114.45 1611 108 \
1508.18 93.55 1209.98 91.21 1065.85 90.94 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1065.94 88.49 1058.94 90.93 1065.93 93.39 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1772.5 178.1 0 121 28 -gene_transcript_lookup_table ",
		label=gene_transcript_lookup_table,
		lp="1772.5,180",
		pos="e,1057.4,90.927 1753.7,268.65 1734.2,261.07 1712,247.7 1712,226 1712,226 1712,226 1712,134 1712,87.648 1656.9,114.45 1611,108 1508.2,\
93.555 1210,91.206 1065.9,90.941"];
	reference_index -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 7 878.3 268.7 876.25 260.89 872.04 249.45 864 243 861.84 241.27 859.53 239.7 857.12 238.29 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 858.33 236.15 850.97 235.18 856.11 240.52 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 904 245.6 0 66 15 -reference_index ",
		label=reference_index,
		lp="904,247.5",
		pos="e,849.62,234.5 878.3,268.7 876.25,260.89 872.04,249.45 864,243 861.84,241.27 859.53,239.7 857.12,238.29"];
	instrument_data_bams -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 7 985.12 268.73 973.94 260.71 955.72 248.9 938 243 930.09 240.36 921.82 238.12 913.41 236.21 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 914.16 233.87 906.8 234.8 913.13 238.66 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 967.5 245.6 0 19 3 -bam ",
		label=bam,
		lp="967.5,247.5",
		pos="e,905.32,234.48 985.12,268.73 973.94,260.71 955.72,248.9 938,243 930.09,240.36 921.82,238.12 913.41,236.21"];
	trimming_adapters -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 10 1092.21 268.51 1082.39 265.64 1071.25 262.52 1061 260 1024.44 251 1015.26 248.46 978 243 957.53 240 935.74 237.45 \
914.5 235.31 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 914.78 232.88 907.57 234.63 914.3 237.75 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1044.5 245.6 0 37 8 -adapters ",
		label=adapters,
		lp="1044.5,247.5",
		pos="e,906.07,234.48 1092.2,268.51 1082.4,265.64 1071.2,262.52 1061,260 1024.4,251 1015.3,248.46 978,243 957.53,240 935.74,237.45 914.5,\
235.31"];
	stringtie -> stringtie_gene_expression_tsv	[_draw_="c 7 -#000000 B 4 203.9 125.56 191.27 110.54 164.76 79.01 149.17 60.47 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 151.32 59.22 144.94 55.44 147.57 62.38 ",
		pos="e,143.97,54.284 203.9,125.56 191.27,110.54 164.76,79.013 149.17,60.472"];
	stringtie -> stringtie_transcript_gtf	[_draw_="c 7 -#000000 B 4 218.38 125.56 231.52 110.54 259.11 79.01 275.34 60.47 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 276.99 62.3 279.76 55.42 273.3 59.08 ",
		pos="e,280.75,54.284 218.38,125.56 231.52,110.54 259.11,79.013 275.34,60.472"];
	kallisto -> transcript_abundance_h5	[_draw_="c 7 -#000000 B 4 752.3 125.56 730.93 110.15 685.45 77.34 660.07 59.04 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 661.82 57.28 654.71 55.17 658.96 61.25 ",
		pos="e,653.48,54.284 752.3,125.56 730.93,110.15 685.45,77.342 660.07,59.036"];
	kallisto -> fusion_evidence	[_draw_="c 7 -#000000 B 4 764 125.56 764 111.14 764 81.48 764 62.73 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 766.45 62.8 764 55.8 761.55 62.8 ",
		pos="e,764,54.284 764,125.56 764,111.14 764,81.476 764,62.727"];
	kallisto -> transcript_abundance_tsv	[_draw_="c 7 -#000000 B 4 738.4 125.56 689.86 109.56 584.46 74.83 530.43 57.02 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 531.38 54.75 523.96 54.89 529.84 59.4 ",
		pos="e,522.52,54.412 738.4,125.56 689.86,109.56 584.46,74.827 530.43,57.017"];
	kallisto -> transcript_to_gene	[_draw_="c 7 -#000000 B 4 807.86 125.5 844.2 118.47 895.9 108.45 934.26 101.02 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 934.34 103.5 940.75 99.77 933.41 98.69 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 933.5 110.6 0 79 19 -transcript_table_h5 ",
		label=transcript_table_h5,
		lp="933.5,112.5",
		pos="e,942.23,99.478 807.86,125.5 844.2,118.47 895.9,108.45 934.26,101.02"];
	transcript_to_gene -> gene_abundance	[_draw_="c 7 -#000000 B 4 982.53 80.71 980.29 75.36 977.3 68.22 974.62 61.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 977.01 61.17 972.04 55.66 972.49 63.06 ",
		pos="e,971.46,54.265 982.53,80.709 980.29,75.355 977.3,68.217 974.62,61.807"];
	merge	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 525 170.5 525 189.5 635 189.5 635 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 580 177.5 0 94 15 -Sambamba: merge ",
		height=0.27778,
		label="Sambamba: merge",
		pos="580,180",
		rects="525,170.5,635,189.5",
		width=1.5278];
	merge -> stringtie	[_draw_="c 7 -#000000 B 7 525.05 170.54 523.69 170.36 522.34 170.18 521 170 423.27 157.19 307.77 145.41 249.2 139.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 249.69 137.25 242.48 139.01 249.21 142.13 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 462.5 155.6 0 19 3 -bam ",
		label=bam,
		lp="462.5,157.5",
		pos="e,240.98,138.86 525.05,170.54 523.69,170.36 522.34,170.18 521,170 423.27,157.19 307.77,145.41 249.2,139.67"];
	index_bam	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 534 125.5 534 144.5 626 144.5 626 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 580 132.5 0 76 14 -samtools index ",
		height=0.27778,
		label="samtools index",
		pos="580,135",
		rects="534,125.5,626,144.5",
		width=1.2778];
	merge -> index_bam	[_draw_="c 7 -#000000 B 4 580 170.71 580 165.59 580 158.85 580 152.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 582.45 152.78 580 145.78 577.55 152.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 589.5 155.6 0 19 3 -bam ",
		label=bam,
		lp="589.5,157.5",
		pos="e,580,144.27 580,170.71 580,165.59 580,158.85 580,152.67"];
	generate_qc_metrics -> metrics	[_draw_="c 7 -#000000 B 4 843 80.71 843 75.59 843 68.85 843 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 845.45 62.78 843 55.78 840.55 62.78 ",
		pos="e,843,54.265 843,80.709 843,75.593 843,68.848 843,62.666"];
	generate_qc_metrics -> chart	[_draw_="c 7 -#000000 B 4 852.83 80.71 859.89 74.76 869.56 66.61 877.75 59.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 879.27 61.63 883.04 55.24 876.11 57.88 ",
		pos="e,884.2,54.265 852.83,80.709 859.89,74.76 869.56,66.609 877.75,59.701"];
	index_bam -> final_bam	[_draw_="c 7 -#000000 B 7 534.27 128.65 520.65 126.11 505.92 122.4 493 117 458.69 102.66 424.06 76.02 404.68 59.77 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 406.33 57.95 399.41 55.27 403.14 61.68 ",
		pos="e,398.26,54.292 534.27,128.65 520.65,126.11 505.92,122.4 493,117 458.69,102.66 424.06,76.025 404.68,59.77"];
	index_bam -> generate_qc_metrics	[_draw_="c 7 -#000000 B 4 625.81 126.51 669.41 119.38 735.25 108.62 783.01 100.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 783.41 103.23 789.92 99.68 782.61 98.39 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 744.5 110.6 0 19 3 -bam ",
		label=bam,
		lp="744.5,112.5",
		pos="e,791.41,99.435 625.81,126.51 669.41,119.38 735.25,108.62 783.01,100.81"];
	bam_to_trimmed_fastq_and_hisat_alignments -> kallisto	[_draw_="c 7 -#000000 B 4 785.7 215.56 781.75 201.07 773.6 171.21 768.49 152.47 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 770.86 151.85 766.66 145.74 766.14 153.14 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 791 178.1 0 26 6 -fastqs ",
		label=fastqs,
		lp="791,180",
		pos="e,766.26,144.28 785.7,215.56 781.75,201.07 773.6,171.21 768.49,152.47"];
	bam_to_trimmed_fastq_and_hisat_alignments -> merge	[_draw_="c 7 -#000000 B 7 668.05 218.68 642.12 216.17 618.91 212.46 607 207 601.28 204.37 596.02 200.02 591.7 195.62 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 593.59 194.05 587.1 190.46 589.93 197.31 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 618.5 200.6 0 23 4 -bams ",
		label=bams,
		lp="618.5,202.5",
		pos="e,586.09,189.33 668.05,218.68 642.12,216.17 618.91,212.46 607,207 601.28,204.37 596.02,200.02 591.7,195.62"];
}