digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 323 408 323 408 0 ",
		bb="0,0,408,323",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
	];
	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 260 8 315 400 315 400 260 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 303 0 84 15 -Workflow Inputs ",
			bb="8,260,400,315",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,305.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		normal_cram	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 310.5 268.5 310.5 287.5 391.5 287.5 391.5 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 351 275.5 0 65 11 -normal_cram ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=normal_cram,
			pos="351,278",
			rects="310.5,268.5,391.5,287.5",
			width=1.125];
		tumor_cram	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 230 268.5 230 287.5 306 287.5 306 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 268 275.5 0 60 10 -tumor_cram ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=tumor_cram,
			pos="268,278",
			rects="230,268.5,306,287.5",
			width=1.0556];
		interval_list	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 84 268.5 84 287.5 158 287.5 158 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 121 275.5 0 58 13 -interval_list ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=interval_list,
			pos="121,278",
			rects="84,268.5,158,287.5",
			width=1.0278];
		docm_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16 268.5 16 287.5 80 287.5 80 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 48 275.5 0 48 8 -docm_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=docm_vcf,
			pos="48,278",
			rects="16,268.5,80,287.5",
			width=0.88889];
		reference	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 162.5 268.5 162.5 287.5 225.5 287.5 225.5 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 194 275.5 0 47 9 -reference ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=reference,
			pos="194,278",
			rects="162.5,268.5,225.5,287.5",
			width=0.875];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 145 8 145 63 320 63 320 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 199 15 0 92 16 -Workflow Outputs ",
			bb="145,8,320,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="199,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		unfiltered_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 153.5 35.5 153.5 54.5 236.5 54.5 236.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 195 42.5 0 67 14 -unfiltered_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=unfiltered_vcf,
			pos="195,45",
			rects="153.5,35.5,236.5,54.5",
			width=1.1528];
		filtered_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 240.5 35.5 240.5 54.5 311.5 54.5 311.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 276 42.5 0 55 12 -filtered_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=filtered_vcf,
			pos="276,45",
			rects="240.5,35.5,311.5,54.5",
			width=0.98611];
	}
	GATK_haplotype_caller	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 119 215.5 119 234.5 269 234.5 269 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 194 222.5 0 134 26 -HaplotypeCaller (GATK 3.6) ",
		height=0.27778,
		label="HaplotypeCaller (GATK 3.6)",
		pos="194,225",
		rects="119,215.5,269,234.5",
		width=2.0833];
	normal_cram -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 331.63 268.64 311.19 259.89 280.24 246.89 268 243 260.45 240.6 252.36 238.39 244.41 236.42 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 245.05 234.05 237.67 234.8 243.9 238.82 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 316.5 245.6 0 53 11 -normal_cram ",
		label=normal_cram,
		lp="316.5,247.5",
		pos="e,236.2,234.44 331.63,268.64 311.19,259.89 280.24,246.89 268,243 260.45,240.6 252.36,238.39 244.41,236.42"];
	docm_filter	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 242.5 170.5 242.5 189.5 311.5 189.5 311.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 277 177.5 0 53 11 -docm filter ",
		height=0.27778,
		label="docm filter",
		pos="277,180",
		rects="242.5,170.5,311.5,189.5",
		width=0.95833];
	normal_cram -> docm_filter	[_draw_="c 7 -#000000 B 10 349.95 268.6 348.86 261.53 346.76 251.28 343 243 336.69 229.07 333.73 225.9 323 215 315.35 207.23 305.8 199.86 \
297.38 193.99 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 298.78 191.98 291.61 190.09 296.04 196.04 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 364.5 223.1 0 53 11 -normal_cram ",
		label=normal_cram,
		lp="364.5,225",
		pos="e,290.36,189.24 349.95,268.6 348.86,261.53 346.76,251.28 343,243 336.69,229.07 333.73,225.9 323,215 315.35,207.23 305.8,199.86 297.38,\
193.99"];
	tumor_cram -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 261.69 268.79 255.55 261.26 245.62 250.21 235 243 232.28 241.15 229.33 239.45 226.3 237.89 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 227.44 235.72 220.06 234.97 225.36 240.16 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 256.5 245.6 0 21 4 -cram ",
		label=cram,
		lp="256.5,247.5",
		pos="e,218.69,234.33 261.69,268.79 255.55,261.26 245.62,250.21 235,243 232.28,241.15 229.33,239.45 226.3,237.89"];
	tumor_cram -> docm_filter	[_draw_="c 7 -#000000 B 4 268.77 268.82 270.24 253.09 273.49 218.4 275.44 197.63 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 277.85 198.14 276.07 190.94 272.97 197.69 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 297.5 223.1 0 49 10 -tumor_cram ",
		label=tumor_cram,
		lp="297.5,225",
		pos="e,276.21,189.44 268.77,268.82 270.24,253.09 273.49,218.4 275.44,197.63"];
	interval_list -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 125.26 268.61 129.55 260.95 136.82 249.81 146 243 148.49 241.15 151.2 239.49 154.02 238 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 154.98 240.26 160.3 235.08 152.92 235.81 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 169.5 245.6 0 47 13 -interval_list ",
		label=interval_list,
		lp="169.5,247.5",
		pos="e,161.67,234.45 125.26,268.61 129.55,260.95 136.82,249.81 146,243 148.49,241.15 151.2,239.49 154.02,238"];
	docm_vcf -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 57.17 268.59 66.31 260.69 81.1 249.19 96 243 101.94 240.53 108.23 238.42 114.64 236.61 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 115.18 239 121.34 234.87 113.95 234.26 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 115.5 245.6 0 39 8 -docm_vcf ",
		label=docm_vcf,
		lp="115.5,247.5",
		pos="e,122.8,234.49 57.167,268.59 66.309,260.69 81.101,249.19 96,243 101.94,240.53 108.23,238.42 114.64,236.61"];
	reference -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 4 194 268.58 194 261.52 194 251.24 194 242.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 196.45 242.78 194 235.78 191.55 242.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 214 245.6 0 40 9 -reference ",
		label=reference,
		lp="214,247.5",
		pos="e,194,234.26 194,268.58 194,261.52 194,251.24 194,242.55"];
	index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 246 80.5 246 99.5 308 99.5 308 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 277 87.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="277,90",
		rects="246,80.5,308,99.5",
		width=0.86111];
	index -> filtered_vcf	[_draw_="c 7 -#000000 B 4 276.81 80.71 276.69 75.59 276.53 68.85 276.39 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 278.84 62.72 276.23 55.78 273.94 62.83 ",
		pos="e,276.19,54.265 276.81,80.709 276.69,75.593 276.53,68.848 276.39,62.666"];
	bgzip	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 244.5 125.5 244.5 144.5 309.5 144.5 309.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 277 132.5 0 49 9 -bgzip VCF ",
		height=0.27778,
		label="bgzip VCF",
		pos="277,135",
		rects="244.5,125.5,309.5,144.5",
		width=0.90278];
	bgzip -> index	[_draw_="c 7 -#000000 B 4 277 125.71 277 120.59 277 113.85 277 107.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 279.45 107.78 277 100.78 274.55 107.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 283.5 110.6 0 13 3 -vcf ",
		label=vcf,
		lp="283.5,112.5",
		pos="e,277,99.265 277,125.71 277,120.59 277,113.85 277,107.67"];
	GATK_haplotype_caller -> unfiltered_vcf	[_draw_="c 7 -#000000 B 10 194.31 215.76 194.6 207.1 195 193.1 195 181 195 181 195 181 195 89 195 80.31 195 70.63 195 62.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 197.45 62.76 195 55.76 192.55 62.76 ",
		pos="e,195,54.243 194.31,215.76 194.6,207.1 195,193.1 195,181 195,181 195,181 195,89 195,80.308 195,70.627 195,62.655"];
	GATK_haplotype_caller -> docm_filter	[_draw_="c 7 -#000000 B 7 205.2 215.58 212.78 210.11 223.18 203.09 233 198 236.72 196.07 240.71 194.23 244.72 192.53 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 245.41 194.89 250.97 189.99 243.56 190.35 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 253 200.6 0 40 8 -docm_out ",
		label=docm_out,
		lp="253,202.5",
		pos="e,252.37,189.42 205.2,215.58 212.78,210.11 223.18,203.09 233,198 236.72,196.07 240.71,194.23 244.72,192.53"];
	docm_filter -> bgzip	[_draw_="c 7 -#000000 B 4 277 170.71 277 165.59 277 158.85 277 152.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 279.45 152.78 277 145.78 274.55 152.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 283.5 155.6 0 13 4 -file ",
		label=file,
		lp="283.5,157.5",
		pos="e,277,144.27 277,170.71 277,165.59 277,158.85 277,152.67"];
}