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	reference_annotation -> stringtie	[_draw_="c 7 -#000000 B 16 108.57 268.58 118.9 265.83 130.44 262.77 141 260 247.14 232.14 272.48 219.98 380 198 461.9 181.26 483.03 180.27 \
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	strand -> stringtie	[_draw_="c 7 -#000000 B 13 1405.65 268.54 1401.15 265.64 1395.94 262.5 1391 260 1293.01 210.54 1266.82 199.18 1161 170 1116.69 157.78 1104.4 \
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	strand -> kallisto	[_draw_="c 7 -#000000 B 4 1416.33 268.6 1411.81 245.82 1399.24 182.55 1393.26 152.39 ",
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		label=strand,
		lp="1417.5,202.5",
		pos="e,1391.6,144.18 1416.3,268.6 1411.8,245.82 1399.2,182.55 1393.3,152.39"];
	strand -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 13 1407.61 268.64 1402.84 265.29 1396.93 261.81 1391 260 1337 243.49 1190.29 270.7 1137 252 1130.71 249.79 1131.24 \
245.36 1125 243 1108.63 236.81 1075.39 232.87 1039.93 230.37 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1040.52 227.95 1033.37 229.93 1040.19 232.84 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1150.5 245.6 0 27 6 -strand ",
		label=strand,
		lp="1150.5,247.5",
		pos="e,1031.9,229.82 1407.6,268.64 1402.8,265.29 1396.9,261.81 1391,260 1337,243.49 1190.3,270.7 1137,252 1130.7,249.79 1131.2,245.36 \
1125,243 1108.6,236.81 1075.4,232.87 1039.9,230.37"];
	strand -> generate_qc_metrics	[_draw_="c 7 -#000000 B 10 1425.57 268.86 1439.32 254.19 1469.54 222.58 1497 198 1511.84 184.71 1514.97 180.33 1532 170 1580.47 140.6 1641.81 \
115.96 1678.65 102.37 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1679.41 104.7 1685.14 100 1677.73 100.1 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1545.5 178.1 0 27 6 -strand ",
		label=strand,
		lp="1545.5,180",
		pos="e,1686.6,99.477 1425.6,268.86 1439.3,254.19 1469.5,222.58 1497,198 1511.8,184.71 1515,180.33 1532,170 1580.5,140.6 1641.8,115.96 \
1678.6,102.37"];
	trimming_adapter_min_overlap -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 13 1267.07 268.52 1251.35 265.33 1232.87 261.99 1216 260 1177.56 255.47 1078.43 265.08 1042 252 1035.73 249.75 1036.16 \
245.55 1030 243 1024.09 240.55 1017.88 238.44 1011.53 236.63 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1012.29 234.29 1004.9 234.87 1011.04 239.03 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1085 245.6 0 86 19 -adapter_min_overlap ",
		label=adapter_min_overlap,
		lp="1085,247.5",
		pos="e,1003.4,234.49 1267.1,268.52 1251.3,265.33 1232.9,261.99 1216,260 1177.6,255.47 1078.4,265.08 1042,252 1035.7,249.75 1036.2,245.55 \
1030,243 1024.1,240.55 1017.9,238.44 1011.5,236.63"];
	kallisto_index -> kallisto	[_draw_="c 7 -#000000 B 7 1489.75 268.78 1494.3 246.51 1505.36 185.66 1494 170 1487.19 160.61 1463.22 152.44 1440 146.47 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1440.71 144.12 1433.32 144.81 1439.53 148.87 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1525.5 200.6 0 55 14 -kallisto_index ",
		label=kallisto_index,
		lp="1525.5,202.5",
		pos="e,1431.9,144.45 1489.8,268.78 1494.3,246.51 1505.4,185.66 1494,170 1487.2,160.61 1463.2,152.44 1440,146.47"];
	refFlat -> generate_qc_metrics	[_draw_="c 7 -#000000 B 10 1838.95 268.71 1837.76 258.63 1836 241.1 1836 226 1836 226 1836 226 1836 134 1836 119.08 1803.77 108.23 1772.05 \
101.16 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1772.85 98.82 1765.49 99.76 1771.83 103.62 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1849.5 178.1 0 27 7 -refFlat ",
		label=refFlat,
		lp="1849.5,180",
		pos="e,1764,99.441 1838.9,268.71 1837.8,258.63 1836,241.1 1836,226 1836,226 1836,226 1836,134 1836,119.08 1803.8,108.23 1772,101.16"];
	reference_index -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 7 300.67 268.53 322.1 260.22 356.76 248.08 388 243 461.19 231.1 653.45 227.46 783.59 226.39 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 783.57 228.84 790.55 226.33 783.53 223.94 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 421 245.6 0 66 15 -reference_index ",
		label=reference_index,
		lp="421,247.5",
		pos="e,792.07,226.32 300.67,268.53 322.1,260.22 356.76,248.08 388,243 461.19,231.1 653.45,227.46 783.59,226.39"];
	sample_name -> stringtie	[_draw_="c 7 -#000000 B 7 205.81 268.59 213.89 265.56 223.28 262.32 232 260 485.31 192.72 799.22 152.75 906.77 140.26 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 906.88 142.71 913.55 139.48 906.32 137.85 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 544 200.6 0 58 11 -sample_name ",
		label=sample_name,
		lp="544,202.5",
		pos="e,915.05,139.3 205.81,268.59 213.89,265.56 223.28,262.32 232,260 485.31,192.72 799.22,152.75 906.77,140.26"];
	read_group_id -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 10 395.81 268.59 403.89 265.55 413.28 262.31 422 260 464.73 248.66 476.05 247.75 520 243 607.73 233.53 707.03 229.29 \
783.75 227.41 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 783.59 229.87 790.53 227.25 783.47 224.97 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 549 245.6 0 58 13 -read_group_id ",
		label=read_group_id,
		lp="549,247.5",
		pos="e,792.04,227.22 395.81,268.59 403.89,265.55 413.28,262.31 422,260 464.73,248.66 476.05,247.75 520,243 607.73,233.53 707.03,229.29 \
783.75,227.41"];
	read_group_fields -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 13 499.18 268.58 508.75 265.58 519.81 262.37 530 260 551.49 255.01 557.25 255.73 579 252 601.25 248.18 606.58 245.68 \
629 243 679.47 236.96 735.28 233.03 783.9 230.49 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 783.89 232.94 790.76 230.14 783.64 228.05 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 665.5 245.6 0 73 17 -read_group_fields ",
		label=read_group_fields,
		lp="665.5,247.5",
		pos="e,792.27,230.06 499.18,268.58 508.75,265.58 519.81,262.37 530,260 551.49,255.01 557.25,255.73 579,252 601.25,248.18 606.58,245.68 \
629,243 679.47,236.96 735.28,233.03 783.9,230.49"];
	trimming_adapter_trim_end -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 7 768.22 268.59 782.69 260.91 805.27 249.77 826 243 833.81 240.45 842.16 238.22 850.46 236.29 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 850.95 238.69 857.25 234.78 849.88 233.9 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 862 245.6 0 72 16 -adapter_trim_end ",
		label=adapter_trim_end,
		lp="862,247.5",
		pos="e,858.73,234.45 768.22,268.59 782.69,260.91 805.27,249.77 826,243 833.81,240.45 842.16,238.22 850.46,236.29"];
	stringtie -> stringtie_transcript_gtf	[_draw_="c 7 -#000000 B 4 934.36 125.56 915.08 110.28 874.24 77.9 851.04 59.51 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 852.64 57.65 845.63 55.22 849.6 61.49 ",
		pos="e,844.45,54.284 934.36,125.56 915.08,110.28 874.24,77.901 851.04,59.509"];
	stringtie -> stringtie_gene_expression_tsv	[_draw_="c 7 -#000000 B 4 948.84 125.56 955.48 110.94 969.25 80.66 977.74 61.96 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 979.94 63.05 980.61 55.66 975.48 61.02 ",
		pos="e,981.23,54.284 948.84,125.56 955.48,110.94 969.25,80.661 977.74,61.962"];
	kallisto -> fusion_evidence	[_draw_="c 7 -#000000 B 4 1391.82 125.56 1394.95 111.07 1401.4 81.21 1405.44 62.47 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1407.81 63.12 1406.89 55.76 1403.02 62.09 ",
		pos="e,1407.2,54.284 1391.8,125.56 1395,111.07 1401.4,81.205 1405.4,62.471"];
	kallisto -> transcript_abundance_h5	[_draw_="c 7 -#000000 B 4 1366.12 125.56 1321.04 109.63 1223.37 75.11 1172.8 57.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1173.65 54.94 1166.23 54.92 1172.01 59.56 ",
		pos="e,1164.8,54.412 1366.1,125.56 1321,109.63 1223.4,75.112 1172.8,57.237"];
	kallisto -> transcript_abundance_tsv	[_draw_="c 7 -#000000 B 4 1380.03 125.56 1362.04 110.35 1324.03 78.18 1302.25 59.75 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1303.87 57.91 1296.95 55.26 1300.71 61.65 ",
		pos="e,1295.8,54.284 1380,125.56 1362,110.35 1324,78.18 1302.2,59.747"];
	kallisto -> transcript_to_gene	[_draw_="c 7 -#000000 B 7 1417.32 125.54 1435.3 120.13 1459.43 113.18 1481 108 1491.15 105.56 1502.04 103.22 1512.55 101.1 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1513.01 103.51 1519.4 99.74 1512.06 98.7 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1520.5 110.6 0 79 19 -transcript_table_h5 ",
		label=transcript_table_h5,
		lp="1520.5,112.5",
		pos="e,1520.9,99.446 1417.3,125.54 1435.3,120.13 1459.4,113.18 1481,108 1491.2,105.56 1502,103.22 1512.6,101.1"];
	bam_to_trimmed_fastq_and_hisat_alignments -> kallisto	[_draw_="c 7 -#000000 B 7 925.38 215.5 945.62 203.11 985.64 180.44 1023 170 1080.7 153.87 1250.36 143.15 1337.31 138.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1337.34 141 1344.21 138.19 1337.09 136.11 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1036 178.1 0 26 6 -fastqs ",
		label=fastqs,
		lp="1036,180",
		pos="e,1345.7,138.11 925.38,215.5 945.62,203.11 985.64,180.44 1023,170 1080.7,153.87 1250.4,143.15 1337.3,138.55"];
	merge	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1051 170.5 1051 189.5 1161 189.5 1161 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1106 177.5 0 94 15 -Sambamba: merge ",
		height=0.27778,
		label="Sambamba: merge",
		pos="1106,180",
		rects="1051,170.5,1161,189.5",
		width=1.5278];
	bam_to_trimmed_fastq_and_hisat_alignments -> merge	[_draw_="c 7 -#000000 B 7 980.46 215.51 995.23 213.18 1010.71 210.35 1025 207 1041.87 203.05 1060.28 197.26 1075.28 192.15 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1075.99 194.5 1081.8 189.89 1074.39 189.87 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1067.5 200.6 0 23 4 -bams ",
		label=bams,
		lp="1067.5,202.5",
		pos="e,1083.2,189.4 980.46,215.51 995.23,213.18 1010.7,210.35 1025,207 1041.9,203.05 1060.3,197.26 1075.3,192.15"];
	generate_qc_metrics -> metrics	[_draw_="c 7 -#000000 B 4 1701.17 80.71 1694.11 74.76 1684.44 66.61 1676.25 59.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1677.89 57.88 1670.96 55.24 1674.73 61.63 ",
		pos="e,1669.8,54.265 1701.2,80.709 1694.1,74.76 1684.4,66.609 1676.2,59.701"];
	generate_qc_metrics -> chart	[_draw_="c 7 -#000000 B 4 1711 80.71 1711 75.59 1711 68.85 1711 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1713.45 62.78 1711 55.78 1708.55 62.78 ",
		pos="e,1711,54.265 1711,80.709 1711,75.593 1711,68.848 1711,62.666"];
	transcript_to_gene -> gene_abundance	[_draw_="c 7 -#000000 B 4 1570.31 80.71 1571.77 75.47 1573.71 68.53 1575.47 62.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1577.76 63.12 1577.29 55.72 1573.05 61.81 ",
		pos="e,1577.7,54.265 1570.3,80.709 1571.8,75.474 1573.7,68.534 1575.5,62.235"];
	index_bam	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1443 125.5 1443 144.5 1535 144.5 1535 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1489 132.5 0 76 14 -samtools index ",
		height=0.27778,
		label="samtools index",
		pos="1489,135",
		rects="1443,125.5,1535,144.5",
		width=1.2778];
	index_bam -> final_bam	[_draw_="c 7 -#000000 B 4 1489.48 125.56 1490.3 111.14 1491.98 81.48 1493.05 62.73 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1495.49 62.92 1493.44 55.79 1490.6 62.64 ",
		pos="e,1493.5,54.284 1489.5,125.56 1490.3,111.14 1492,81.476 1493,62.727"];
	index_bam -> generate_qc_metrics	[_draw_="c 7 -#000000 B 7 1514.63 125.57 1532.73 119.89 1557.63 112.62 1580 108 1581.61 107.67 1608.08 104.22 1636.81 100.51 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1636.82 102.98 1643.45 99.66 1636.2 98.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1589.5 110.6 0 19 3 -bam ",
		label=bam,
		lp="1589.5,112.5",
		pos="e,1645,99.465 1514.6,125.57 1532.7,119.89 1557.6,112.62 1580,108 1581.6,107.67 1608.1,104.22 1636.8,100.51"];
	merge -> stringtie	[_draw_="c 7 -#000000 B 4 1074.19 170.5 1047.92 163.49 1010.56 153.51 982.77 146.09 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 983.7 143.8 976.3 144.36 982.43 148.53 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1048.5 155.6 0 19 3 -bam ",
		label=bam,
		lp="1048.5,157.5",
		pos="e,974.84,143.97 1074.2,170.5 1047.9,163.49 1010.6,153.51 982.77,146.09"];
	merge -> index_bam	[_draw_="c 7 -#000000 B 4 1160.9 174.53 1224.94 169.05 1334.19 158.89 1434.93 145.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1434.99 147.7 1441.59 144.33 1434.32 142.85 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1382.5 155.6 0 19 3 -bam ",
		label=bam,
		lp="1382.5,157.5",
		pos="e,1443.1,144.12 1160.9,174.53 1224.9,169.05 1334.2,158.89 1434.9,145.24"];
}