digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 413 807 413 807 0 ",
		bb="0,0,807,413",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
	];
	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 350 8 405 799 405 799 350 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 393 0 84 15 -Workflow Inputs ",
			bb="8,350,799,405",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,395.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		insert_size	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16.5 358.5 16.5 377.5 85.5 377.5 85.5 358.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 51 365.5 0 53 11 -insert_size ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=insert_size,
			pos="51,368",
			rects="16.5,358.5,85.5,377.5",
			width=0.95833];
		tumor_sample_name	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 90 358.5 90 377.5 210 377.5 210 358.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 150 365.5 0 104 17 -tumor_sample_name ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=tumor_sample_name,
			pos="150,368",
			rects="90,358.5,210,377.5",
			width=1.6667];
		normal_sample_name	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 214.5 358.5 214.5 377.5 339.5 377.5 339.5 358.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 277 365.5 0 109 18 -normal_sample_name ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=normal_sample_name,
			pos="277,368",
			rects="214.5,358.5,339.5,377.5",
			width=1.7361];
		reference	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 498.5 358.5 498.5 377.5 561.5 377.5 561.5 358.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 530 365.5 0 47 9 -reference ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=reference,
			pos="530,368",
			rects="498.5,358.5,561.5,377.5",
			width=0.875];
		output_name	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 642.5 358.5 642.5 377.5 723.5 377.5 723.5 358.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 683 365.5 0 65 11 -output_name ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=output_name,
			pos="683,368",
			rects="642.5,358.5,723.5,377.5",
			width=1.125];
		normal_bam	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 344 358.5 344 377.5 422 377.5 422 358.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 383 365.5 0 62 10 -normal_bam ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=normal_bam,
			pos="383,368",
			rects="344,358.5,422,377.5",
			width=1.0833];
		region_file	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 426 358.5 426 377.5 494 377.5 494 358.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 460 365.5 0 52 11 -region_file ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=region_file,
			pos="460,368",
			rects="426,358.5,494,377.5",
			width=0.94444];
		ref_name	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 727.5 358.5 727.5 377.5 790.5 377.5 790.5 358.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 759 365.5 0 47 8 -ref_name ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=ref_name,
			pos="759,368",
			rects="727.5,358.5,790.5,377.5",
			width=0.875];
		tumor_bam	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 565.5 358.5 565.5 377.5 638.5 377.5 638.5 358.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 602 365.5 0 57 9 -tumor_bam ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=tumor_bam,
			pos="602,368",
			rects="565.5,358.5,638.5,377.5",
			width=1.0139];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 557 8 557 63 677 63 677 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 611 15 0 92 16 -Workflow Outputs ",
			bb="557,8,677,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="611,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		pindel_region_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 565.5 35.5 565.5 54.5 668.5 54.5 668.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 617 42.5 0 87 17 -pindel_region_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=pindel_region_vcf,
			pos="617,45",
			rects="565.5,35.5,668.5,54.5",
			width=1.4306];
	}
	pindel_region	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 343 305.5 343 324.5 435 324.5 435 305.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 389 312.5 0 76 15 -pindel v0.2.5b8 ",
		height=0.27778,
		label="pindel v0.2.5b8",
		pos="389,315",
		rects="343,305.5,435,324.5",
		width=1.2778];
	insert_size -> pindel_region	[_draw_="c 7 -#000000 B 7 67.29 358.63 84.21 350.39 111.7 338.32 137 333 204.27 318.86 283.66 315.66 335.09 315.31 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 334.91 317.76 341.9 315.28 334.89 312.86 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 159 335.6 0 44 11 -insert_size ",
		label=insert_size,
		lp="159,337.5",
		pos="e,343.41,315.27 67.289,358.63 84.211,350.39 111.7,338.32 137,333 204.27,318.86 283.66,315.66 335.09,315.31"];
	tumor_sample_name -> pindel_region	[_draw_="c 7 -#000000 B 7 159.36 358.63 169.04 350.53 184.94 338.66 201 333 224.86 324.58 288.32 320.14 334.93 317.93 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 335.04 320.38 341.92 317.61 334.81 315.48 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 243.5 335.6 0 85 17 -tumor_sample_name ",
		label=tumor_sample_name,
		lp="243.5,337.5",
		pos="e,343.43,317.55 159.36,358.63 169.04,350.53 184.94,338.66 201,333 224.86,324.58 288.32,320.14 334.93,317.93"];
	normal_sample_name -> pindel_region	[_draw_="c 7 -#000000 B 7 279.15 358.61 281.62 350.72 286.48 339.23 295 333 301.76 328.06 317.81 324.37 334.77 321.71 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 335.07 324.15 341.64 320.71 334.36 319.3 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 340 335.6 0 90 18 -normal_sample_name ",
		label=normal_sample_name,
		lp="340,337.5",
		pos="e,343.14,320.49 279.15,358.61 281.62,350.72 286.48,339.23 295,333 301.76,328.06 317.81,324.37 334.77,321.71"];
	pindel2vcf	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 571 215.5 571 234.5 663 234.5 663 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 617 222.5 0 76 15 -pindel v0.2.5b8 ",
		height=0.27778,
		label="pindel v0.2.5b8",
		pos="617,225",
		rects="571,215.5,663,234.5",
		width=1.2778];
	reference -> pindel2vcf	[_draw_="c 7 -#000000 B 4 535.18 358.6 549.42 335.53 589.29 270.9 607.6 241.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 609.57 242.71 611.16 235.47 605.4 240.14 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 598 290.6 0 40 9 -reference ",
		label=reference,
		lp="598,292.5",
		pos="e,611.95,234.18 535.18,358.6 549.42,335.53 589.29,270.9 607.6,241.24"];
	reference -> pindel_region	[_draw_="c 7 -#000000 B 7 522.64 358.54 515.23 350.6 503.06 339.08 490 333 475.45 326.23 458.6 322.12 442.89 319.63 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 443.57 317.26 436.29 318.69 442.87 322.11 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 523 335.6 0 40 9 -reference ",
		label=reference,
		lp="523,337.5",
		pos="e,434.79,318.48 522.64,358.54 515.23,350.6 503.06,339.08 490,333 475.45,326.23 458.6,322.12 442.89,319.63"];
	output_name -> pindel2vcf	[_draw_="c 7 -#000000 B 4 679.07 358.6 668.31 335.62 638.28 271.45 624.31 241.62 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 626.66 240.85 621.47 235.55 622.22 242.93 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 677.5 290.6 0 55 11 -output_name ",
		label=output_name,
		lp="677.5,292.5",
		pos="e,620.83,234.18 679.07,358.6 668.31,335.62 638.28,271.45 624.31,241.62"];
	normal_bam -> pindel_region	[_draw_="c 7 -#000000 B 4 383.99 358.58 384.82 351.52 386.03 341.24 387.05 332.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 389.47 333.01 387.85 325.77 384.6 332.43 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 411.5 335.6 0 51 10 -normal_bam ",
		label=normal_bam,
		lp="411.5,337.5",
		pos="e,388.03,324.26 383.99,358.58 384.82,351.52 386.03,341.24 387.05,332.55"];
	region_file -> pindel_region	[_draw_="c 7 -#000000 B 7 456.5 358.59 452.91 350.91 446.63 339.77 438 333 435.63 331.14 433.04 329.48 430.33 327.99 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 431.68 325.92 424.31 325.1 429.57 330.34 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 467.5 335.6 0 43 11 -region_file ",
		label=region_file,
		lp="467.5,337.5",
		pos="e,422.95,324.45 456.5,358.59 452.91,350.91 446.63,339.77 438,333 435.63,331.14 433.04,329.48 430.33,327.99"];
	ref_name -> pindel2vcf	[_draw_="c 7 -#000000 B 7 754.89 358.9 746.93 343.75 728.23 310.62 706 288 686.08 267.72 658.7 249.8 639.59 238.51 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 641.05 236.52 633.76 235.13 638.59 240.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 733.5 290.6 0 39 8 -ref_name ",
		label=ref_name,
		lp="733.5,292.5",
		pos="e,632.46,234.37 754.89,358.9 746.93,343.75 728.23,310.62 706,288 686.08,267.72 658.7,249.8 639.59,238.51"];
	tumor_bam -> pindel_region	[_draw_="c 7 -#000000 B 7 591.13 358.72 579.95 350.68 561.73 338.87 544 333 511.58 322.27 473.48 317.98 443.16 316.4 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 443.45 313.96 436.34 316.09 443.23 318.86 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 587 335.6 0 46 9 -tumor_bam ",
		label=tumor_bam,
		lp="587,337.5",
		pos="e,434.83,316.02 591.13,358.72 579.95,350.68 561.73,338.87 544,333 511.58,322.27 473.48,317.98 443.16,316.4"];
	fix_vcf_header	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 575.5 170.5 575.5 189.5 658.5 189.5 658.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 617 177.5 0 67 14 -fix vcf header ",
		height=0.27778,
		label="fix vcf header",
		pos="617,180",
		rects="575.5,170.5,658.5,189.5",
		width=1.1528];
	remove_end_tags	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 552.5 125.5 552.5 144.5 681.5 144.5 681.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 617 132.5 0 113 20 -remove END INFO tags ",
		height=0.27778,
		label="remove END INFO tags",
		pos="617,135",
		rects="552.5,125.5,681.5,144.5",
		width=1.7917];
	fix_vcf_header -> remove_end_tags	[_draw_="c 7 -#000000 B 4 617 170.71 617 165.59 617 158.85 617 152.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 619.45 152.78 617 145.78 614.55 152.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 623.5 155.6 0 13 3 -vcf ",
		label=vcf,
		lp="623.5,157.5",
		pos="e,617,144.27 617,170.71 617,165.59 617,158.85 617,152.67"];
	index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 586 80.5 586 99.5 648 99.5 648 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 617 87.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="617,90",
		rects="586,80.5,648,99.5",
		width=0.86111];
	remove_end_tags -> index	[_draw_="c 7 -#000000 B 4 617 125.71 617 120.59 617 113.85 617 107.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 619.45 107.78 617 100.78 614.55 107.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 623.5 110.6 0 13 3 -vcf ",
		label=vcf,
		lp="623.5,112.5",
		pos="e,617,99.265 617,125.71 617,120.59 617,113.85 617,107.67"];
	pindel2vcf -> fix_vcf_header	[_draw_="c 7 -#000000 B 4 617 215.71 617 210.59 617 203.85 617 197.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 619.45 197.78 617 190.78 614.55 197.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 623.5 200.6 0 13 3 -vcf ",
		label=vcf,
		lp="623.5,202.5",
		pos="e,617,189.27 617,215.71 617,210.59 617,203.85 617,197.67"];
	cat	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 405 260.5 405 279.5 437 279.5 437 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 421 267.5 0 16 3 -cat ",
		height=0.27778,
		label=cat,
		pos="421,270",
		rects="405,260.5,437,279.5",
		width=0.44444];
	cat -> pindel2vcf	[_draw_="c 7 -#000000 B 7 436.79 264.73 457.1 259.3 493.54 249.83 525 243 537.24 240.34 550.45 237.74 562.94 235.41 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 563.1 237.87 569.54 234.19 562.21 233.05 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 546.5 245.6 0 43 10 -pindel_out ",
		label=pindel_out,
		lp="546.5,247.5",
		pos="e,571.03,233.91 436.79,264.73 457.1,259.3 493.54,249.83 525,243 537.24,240.34 550.45,237.74 562.94,235.41"];
	index -> pindel_region_vcf	[_draw_="c 7 -#000000 B 4 617 80.71 617 75.59 617 68.85 617 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 619.45 62.78 617 55.78 614.55 62.78 ",
		pos="e,617,54.265 617,80.709 617,75.593 617,68.848 617,62.666"];
	pindel_region -> cat	[_draw_="c 7 -#000000 B 7 389.74 305.63 390.57 300.19 392.31 293.18 396 288 396.84 286.82 397.78 285.7 398.8 284.64 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 400.32 286.57 404.09 280.18 397.16 282.82 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 420 290.6 0 48 11 -pindel_outs ",
		label=pindel_outs,
		lp="420,292.5",
		pos="e,405.25,279.21 389.74,305.63 390.57,300.19 392.31,293.18 396,288 396.84,286.82 397.78,285.7 398.8,284.64"];
	pindel_region -> cat	[_draw_="c 7 -#000000 B 7 431.39 305.59 435.11 303.35 438.44 300.54 441 297 443.78 293.16 442.64 289.07 439.83 285.29 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 441.66 283.66 434.99 280.41 438.18 287.11 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 466 290.6 0 48 11 -pindel_outs ",
		label=pindel_outs,
		lp="466,292.5",
		pos="e,433.92,279.34 431.39,305.59 435.11,303.35 438.44,300.54 441,297 443.78,293.16 442.64,289.07 439.83,285.29"];
	pindel_region -> cat	[_draw_="c 7 -#000000 B 7 434.98 312.03 458.47 309.95 483.63 305.7 491 297 505.08 280.38 470.53 274.38 445.11 272.21 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 445.6 269.79 438.44 271.73 445.24 274.68 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 518 290.6 0 48 11 -pindel_outs ",
		label=pindel_outs,
		lp="518,292.5",
		pos="e,436.93,271.62 434.98,312.03 458.47,309.95 483.63,305.7 491,297 505.08,280.38 470.53,274.38 445.11,272.21"];
	pindel_region -> cat	[_draw_="c 7 -#000000 B 10 343.1 312.5 317.83 310.6 290 306.37 282 297 279.4 293.96 279.35 291 282 288 296.67 271.43 360.78 269.83 396.59 \
270.29 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 396.48 272.74 403.52 270.41 396.57 267.84 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 306 290.6 0 48 11 -pindel_outs ",
		label=pindel_outs,
		lp="306,292.5",
		pos="e,405.03,270.44 343.1,312.5 317.83,310.6 290,306.37 282,297 279.4,293.96 279.35,291 282,288 296.67,271.43 360.78,269.83 396.59,270.29"];
	pindel_region -> cat	[_draw_="c 7 -#000000 B 7 353.1 305.6 342.78 301.47 335.79 295.69 342 288 348.83 279.55 376.31 275.1 396.95 272.91 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 397.06 275.36 403.8 272.24 396.59 270.48 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 366 290.6 0 48 11 -pindel_outs ",
		label=pindel_outs,
		lp="366,292.5",
		pos="e,405.3,272.1 353.1,305.6 342.78,301.47 335.79,295.69 342,288 348.83,279.55 376.31,275.1 396.95,272.91"];
}