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			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 59 320.5 0 70 11 -sample_name ",
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			rects="16,313.5,102,332.5",
			width=1.1944];
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	subgraph cluster_outputs {
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			lp="987,17.5",
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			fillcolor="#94DDF4",
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			pos="1222,45",
			rects="1179.5,35.5,1264.5,54.5",
			width=1.1806];
		cram	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1054.5 35.5 1054.5 54.5 1095.5 54.5 1095.5 35.5 ",
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			width=0.56944];
		cpgs	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1136.5 35.5 1136.5 54.5 1175.5 54.5 1175.5 35.5 ",
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			label=cpgs,
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			width=0.54167];
		gathered_directory	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 941.5 35.5 941.5 54.5 1050.5 54.5 1050.5 35.5 ",
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			width=1.5139];
		vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1100 35.5 1100 54.5 1132 54.5 1132 35.5 ",
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	bedgraph_to_bigwig	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1221 80.5 1221 99.5 1389 99.5 1389 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1305 87.5 0 152 29 -bedGraph to bigwig conversion ",
		height=0.27778,
		label="bedGraph to bigwig conversion",
		pos="1305,90",
		rects="1221,80.5,1389,99.5",
		width=2.3333];
	reference_sizes -> bedgraph_to_bigwig	[_draw_="c 7 -#000000 B 10 1342.45 319.82 1403.49 315.66 1503 303.85 1503 271 1503 271 1503 271 1503 134 1503 110.46 1448.88 99.78 1397.23 \
94.95 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1397.67 92.53 1390.48 94.36 1397.24 97.41 ",
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		label=reference_sizes,
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	bam_to_cram	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1020 170.5 1020 189.5 1160 189.5 1160 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1090 177.5 0 124 22 -BAM to CRAM conversion ",
		height=0.27778,
		label="BAM to CRAM conversion",
		pos="1090,180",
		rects="1020,170.5,1160,189.5",
		width=1.9444];
	reference_index -> bam_to_cram	[_draw_="c 7 -#000000 B 10 1193.52 313.89 1186.41 300.92 1172.19 274.68 1161 252 1152.99 235.77 1155.93 228.61 1144 215 1136.32 206.24 1125.83 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1117.6 191.38 1110.28 190.19 1115.26 195.68 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1181 245.6 0 40 9 -reference ",
		label=reference,
		lp="1181,247.5",
		pos="e,1108.9,189.46 1193.5,313.89 1186.4,300.92 1172.2,274.68 1161,252 1153,235.77 1155.9,228.61 1144,215 1136.3,206.24 1125.8,198.94 \
1116.1,193.37"];
	bisulfite_qc	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 935.5 125.5 935.5 144.5 1036.5 144.5 1036.5 125.5 ",
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		fillcolor="#F3CEA1",
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		label="Bisulfite QC tools",
		pos="986,135",
		rects="935.5,125.5,1036.5,144.5",
		width=1.4028];
	reference_index -> bisulfite_qc	[_draw_="c 7 -#000000 B 7 1173.74 313.54 1121.36 295.05 1001.54 251.34 991 235 974.83 209.93 978.27 173.42 982.17 152.46 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 984.54 153.09 983.57 145.74 979.74 152.1 ",
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		label=reference,
		lp="1011,225",
		pos="e,983.87,144.26 1173.7,313.54 1121.4,295.05 1001.5,251.34 991,235 974.83,209.93 978.27,173.42 982.17,152.46"];
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		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1206 177.5 0 67 14 -Biscuit pileup ",
		height=0.27778,
		label="Biscuit pileup",
		pos="1206,180",
		rects="1164.5,170.5,1247.5,189.5",
		width=1.1528];
	reference_index -> pileup	[_draw_="c 7 -#000000 B 4 1198.48 313.6 1199.77 290.82 1203.36 227.55 1205.07 197.39 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1207.5 197.82 1205.45 190.69 1202.61 197.54 ",
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		label=reference,
		lp="1222,247.5",
		pos="e,1205.5,189.18 1198.5,313.6 1199.8,290.82 1203.4,227.55 1205.1,197.39"];
	bam_to_trimmed_fastq_and_biscuit_alignments	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 613.5 260.5 613.5 279.5 856.5 279.5 856.5 260.5 ",
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		fillcolor="#F3CEA1",
		height=0.27778,
		label="bam to trimmed fastqs and biscuit alignments",
		pos="735,270",
		rects="613.5,260.5,856.5,279.5",
		width=3.375];
	reference_index -> bam_to_trimmed_fastq_and_biscuit_alignments	[_draw_="c 7 -#000000 B 13 1177.01 313.53 1167.93 310.25 1157.1 306.85 1147 305 1104.56 297.21 993.64 311.49 953 297 946.72 294.76 947.23 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 865.08 273.61 857.91 275.53 864.71 278.5 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 986 290.6 0 66 15 -reference_index ",
		label=reference_index,
		lp="986,292.5",
		pos="e,856.4,275.42 1177,313.53 1167.9,310.25 1157.1,306.85 1147,305 1104.6,297.21 993.64,311.49 953,297 946.72,294.76 947.23,290.37 \
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	vcf2bed	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1114 125.5 1114 144.5 1496 144.5 1496 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1305 132.5 0 366 77 -convert a biscuit pileup vcf to a bed and bedgraph file, via a wrapper script ",
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		label="convert a biscuit pileup vcf to a bed and bedgraph file, via a wrapper script",
		pos="1305,135",
		rects="1114,125.5,1496,144.5",
		width=5.3056];
	reference_index -> vcf2bed	[_draw_="c 7 -#000000 B 10 1223.32 313.6 1241.57 305.77 1263 292.09 1263 271 1263 271 1263 271 1263 179 1263 166.45 1272.27 156.2 1282.1 \
148.86 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1283.22 151.07 1287.63 145.11 1280.46 147.01 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1283 223.1 0 40 9 -reference ",
		label=reference,
		lp="1283,225",
		pos="e,1288.9,144.26 1223.3,313.6 1241.6,305.77 1263,292.09 1263,271 1263,271 1263,271 1263,179 1263,166.45 1272.3,156.2 1282.1,148.86"];
	trimming_adapters -> bam_to_trimmed_fastq_and_biscuit_alignments	[_draw_="c 7 -#000000 B 7 697.42 313.6 692.6 306.34 687.73 295.82 693 288 693.82 286.79 694.73 285.66 695.74 284.62 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 711.5 290.6 0 37 8 -adapters ",
		label=adapters,
		lp="711.5,292.5",
		pos="e,702.25,279.47 697.42,313.6 692.6,306.34 687.73,295.82 693,288 693.82,286.79 694.73,285.66 695.74,284.62"];
	trimming_max_uncalled -> bam_to_trimmed_fastq_and_biscuit_alignments	[_draw_="c 7 -#000000 B 7 796.53 313.56 771.26 307.23 741.03 299.28 739 297 736.67 294.39 735.38 291.02 734.71 287.57 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 737.16 287.55 734.21 280.75 732.28 287.91 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 767.5 290.6 0 57 12 -max_uncalled ",
		label=max_uncalled,
		lp="767.5,292.5",
		pos="e,734.1,279.24 796.53,313.56 771.26,307.23 741.03,299.28 739,297 736.67,294.39 735.38,291.02 734.71,287.57"];
	trimming_adapter_trim_end -> bam_to_trimmed_fastq_and_biscuit_alignments	[_draw_="c 7 -#000000 B 13 943.73 313.52 929.86 310.44 913.75 307.19 899 305 857.52 298.85 844.18 311.94 805 297 798.77 294.63 798.96 290.99 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 780.2 279.89 772.78 279.96 778.63 284.53 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 841 290.6 0 72 16 -adapter_trim_end ",
		label=adapter_trim_end,
		lp="841,292.5",
		pos="e,771.35,279.48 943.73,313.52 929.86,310.44 913.75,307.19 899,305 857.52,298.85 844.18,311.94 805,297 798.77,294.63 798.96,290.99 \
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	read_group_id -> bam_to_trimmed_fastq_and_biscuit_alignments	[_draw_="c 7 -#000000 B 13 1083.71 313.54 1075.35 310.27 1065.36 306.87 1056 305 1018.91 297.6 921.59 309.8 886 297 879.73 294.74 880.18 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 855.93 279.29 848.54 279.87 854.68 284.03 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 915 290.6 0 58 13 -read_group_id ",
		label=read_group_id,
		lp="915,292.5",
		pos="e,847.08,279.48 1083.7,313.54 1075.4,310.27 1065.4,306.87 1056,305 1018.9,297.6 921.59,309.8 886,297 879.73,294.74 880.18,290.49 \
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	QCannotation -> bisulfite_qc	[_draw_="c 7 -#000000 B 10 171.85 313.55 198.21 303.45 237 286.05 237 271 237 271 237 271 237 179 237 144.48 750.79 137.64 927.3 136.31 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 927.2 138.77 934.18 136.26 927.16 133.87 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 265.5 223.1 0 57 12 -QCannotation ",
		label=QCannotation,
		lp="265.5,225",
		pos="e,935.69,136.25 171.85,313.55 198.21,303.45 237,286.05 237,271 237,271 237,271 237,179 237,144.48 750.79,137.64 927.3,136.31"];
	instrument_data_bams -> bam_to_trimmed_fastq_and_biscuit_alignments	[_draw_="c 7 -#000000 B 7 289.09 313.51 300.89 310.51 314.5 307.31 327 305 419.24 287.98 524.81 279.47 605.44 275.22 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 447.5 290.6 0 19 3 -bam ",
		label=bam,
		lp="447.5,292.5",
		pos="e,613.66,274.8 289.09,313.51 300.89,310.51 314.5,307.31 327,305 419.24,287.98 524.81,279.47 605.44,275.22"];
	trimming_adapter_min_overlap -> bam_to_trimmed_fastq_and_biscuit_alignments	[_draw_="c 7 -#000000 B 7 433.76 313.63 455.5 305.65 490.05 293.98 521 288 548.06 282.77 577.34 279.15 605.31 276.63 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 564 290.6 0 86 19 -adapter_min_overlap ",
		label=adapter_min_overlap,
		lp="564,292.5",
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	trimming_min_readlength -> bam_to_trimmed_fastq_and_biscuit_alignments	[_draw_="c 7 -#000000 B 7 583.03 313.55 593.01 305.62 609.09 294.1 625 288 631.76 285.41 638.89 283.21 646.15 281.35 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 657 290.6 0 64 14 -min_readlength ",
		label=min_readlength,
		lp="657,292.5",
		pos="e,654.06,279.46 583.03,313.55 593.01,305.62 609.09,294.1 625,288 631.76,285.41 638.89,283.21 646.15,281.35"];
	index_cram	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 989.5 80.5 989.5 99.5 1108.5 99.5 1108.5 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1049 87.5 0 103 19 -samtools index cram ",
		height=0.27778,
		label="samtools index cram",
		pos="1049,90",
		rects="989.5,80.5,1108.5,99.5",
		width=1.6528];
	bam_to_cram -> index_cram	[_draw_="c 7 -#000000 B 4 1086.07 170.56 1079.26 155.94 1065.15 125.66 1056.44 106.96 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1058.68 105.97 1053.5 100.66 1054.23 108.04 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1083.5 133.1 0 21 4 -cram ",
		label=cram,
		lp="1083.5,135",
		pos="e,1052.9,99.284 1086.1,170.56 1079.3,155.94 1065.1,125.66 1056.4,106.96"];
	bisulfite_qc -> gathered_directory	[_draw_="c 7 -#000000 B 7 986.08 125.55 986.28 114.89 986.92 96.02 989 80 989.75 74.2 990.94 67.9 992.13 62.32 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 994.45 63.17 993.6 55.8 989.67 62.09 ",
		pos="e,993.93,54.325 986.08,125.55 986.28,114.89 986.92,96.015 989,80 989.75,74.196 990.94,67.901 992.13,62.325"];
	merge	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1033 215.5 1033 234.5 1143 234.5 1143 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1088 222.5 0 94 15 -Sambamba: merge ",
		height=0.27778,
		label="Sambamba: merge",
		pos="1088,225",
		rects="1033,215.5,1143,234.5",
		width=1.5278];
	merge -> bam_to_cram	[_draw_="c 7 -#000000 B 4 1088.39 215.71 1088.62 210.59 1088.94 203.85 1089.22 197.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1091.67 197.88 1089.55 190.78 1086.77 197.66 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1098.5 200.6 0 19 3 -bam ",
		label=bam,
		lp="1098.5,202.5",
		pos="e,1089.6,189.27 1088.4,215.71 1088.6,210.59 1088.9,203.85 1089.2,197.67"];
	merge -> bisulfite_qc	[_draw_="c 7 -#000000 B 7 1041.76 215.5 1026.21 210.49 1010.03 202.55 999 190 998.68 189.63 993.56 168.11 989.84 152.35 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 992.3 152.08 988.31 145.83 987.53 153.2 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1008.5 178.1 0 19 3 -bam ",
		label=bam,
		lp="1008.5,180",
		pos="e,987.96,144.36 1041.8,215.5 1026.2,210.49 1010,202.55 999,190 998.68,189.63 993.56,168.11 989.84,152.35"];
	merge -> pileup	[_draw_="c 7 -#000000 B 4 1111.31 215.5 1129.49 208.88 1154.92 199.61 1174.85 192.35 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1175.58 194.69 1181.31 190 1173.9 190.09 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1166.5 200.6 0 19 3 -bam ",
		label=bam,
		lp="1166.5,202.5",
		pos="e,1182.7,189.48 1111.3,215.5 1129.5,208.88 1154.9,199.61 1174.8,192.35"];
	pileup -> vcf	[_draw_="c 7 -#000000 B 7 1171.14 170.54 1148.07 164.16 1120.86 154.85 1114 145 1105.03 132.12 1109.88 87.21 1113.39 62.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1115.81 62.97 1114.42 55.69 1110.96 62.25 ",
		pos="e,1114.6,54.192 1171.1,170.54 1148.1,164.16 1120.9,154.85 1114,145 1105,132.12 1109.9,87.215 1113.4,62.546"];
	pileup -> bisulfite_qc	[_draw_="c 7 -#000000 B 10 1164.83 170.62 1163.54 170.4 1162.26 170.2 1161 170 1129.62 165.1 1121.25 167.64 1090 162 1067.72 157.98 1043.14 \
151.91 1023.47 146.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1024.22 144.31 1016.82 144.84 1022.94 149.04 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1096.5 155.6 0 13 3 -vcf ",
		label=vcf,
		lp="1096.5,157.5",
		pos="e,1015.4,144.45 1164.8,170.62 1163.5,170.4 1162.3,170.2 1161,170 1129.6,165.1 1121.3,167.64 1090,162 1067.7,157.98 1043.1,151.91 \
1023.5,146.65"];
	pileup -> vcf2bed	[_draw_="c 7 -#000000 B 7 1217.03 170.55 1224.79 164.93 1235.6 157.75 1246 153 1250.77 150.82 1255.89 148.85 1261.05 147.09 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1261.77 149.43 1267.69 144.96 1260.28 144.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1252.5 155.6 0 13 3 -vcf ",
		label=vcf,
		lp="1252.5,157.5",
		pos="e,1269.1,144.5 1217,170.55 1224.8,164.93 1235.6,157.75 1246,153 1250.8,150.82 1255.9,148.85 1261,147.09"];
	index_cram -> cram	[_draw_="c 7 -#000000 B 4 1054.01 80.71 1057.32 75.24 1061.76 67.9 1065.7 61.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1067.69 62.82 1069.22 55.56 1063.5 60.28 ",
		pos="e,1070,54.265 1054,80.709 1057.3,75.236 1061.8,67.899 1065.7,61.381"];
	bam_to_trimmed_fastq_and_biscuit_alignments -> merge	[_draw_="c 7 -#000000 B 4 814.37 260.51 871.29 254.26 950.02 245.26 1024.91 235.4 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1024.96 237.86 1031.58 234.51 1024.32 233 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 974.5 245.6 0 23 4 -bams ",
		label=bams,
		lp="974.5,247.5",
		pos="e,1033.1,234.31 814.37,260.51 871.29,254.26 950.02,245.26 1024.9,235.4"];
	vcf2bed -> cpgs	[_draw_="c 7 -#000000 B 7 1277.18 125.63 1259.78 119.77 1237.29 111.03 1219 100 1200.3 88.73 1181.66 71.87 1169.56 60 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1171.62 58.59 1164.94 55.37 1168.15 62.05 ",
		pos="e,1163.9,54.297 1277.2,125.63 1259.8,119.77 1237.3,111.03 1219,100 1200.3,88.726 1181.7,71.871 1169.6,59.997"];
	vcf2bed -> bedgraph_to_bigwig	[_draw_="c 7 -#000000 B 4 1305 125.71 1305 120.59 1305 113.85 1305 107.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1307.45 107.78 1305 100.78 1302.55 107.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1325 110.6 0 40 8 -bedgraph ",
		label=bedgraph,
		lp="1325,112.5",
		pos="e,1305,99.265 1305,125.71 1305,120.59 1305,113.85 1305,107.67"];
	bedgraph_to_bigwig -> cpg_bedgraph	[_draw_="c 7 -#000000 B 4 1288.6 80.5 1276.32 74.14 1259.35 65.35 1245.61 58.23 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1247.05 56.22 1239.71 55.17 1244.8 60.57 ",
		pos="e,1238.4,54.478 1288.6,80.505 1276.3,74.144 1259.4,65.351 1245.6,58.233"];
}