digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 233 469 233 469 0 ",
		bb="0,0,469,233",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
	];
	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 170 8 225 461 225 461 170 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 213 0 84 15 -Workflow Inputs ",
			bb="8,170,461,225",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,215.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		bams	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 158 178.5 158 197.5 202 197.5 202 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 180 185.5 0 28 4 -bams ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=bams,
			pos="180,188",
			rects="158,178.5,202,197.5",
			width=0.61111];
		readgroups	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 273.5 178.5 273.5 197.5 344.5 197.5 344.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 309 185.5 0 55 10 -readgroups ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=readgroups,
			pos="309,188",
			rects="273.5,178.5,344.5,197.5",
			width=0.98611];
		downsample_probability	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16.5 178.5 16.5 197.5 153.5 197.5 153.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 85 185.5 0 121 22 -downsample_probability ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=downsample_probability,
			pos="85,188",
			rects="16.5,178.5,153.5,197.5",
			width=1.9028];
		bqsr_known_sites	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 349 178.5 349 197.5 453 197.5 453 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 401 185.5 0 88 16 -bqsr_known_sites ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=bqsr_known_sites,
			pos="401,188",
			rects="349,178.5,453,197.5",
			width=1.4444];
		reference	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 206.5 178.5 206.5 197.5 269.5 197.5 269.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 238 185.5 0 47 9 -reference ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=reference,
			pos="238,188",
			rects="206.5,178.5,269.5,197.5",
			width=0.875];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 209 8 209 63 427 63 427 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 263 15 0 92 16 -Workflow Outputs ",
			bb="209,8,427,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="263,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		bam	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 217 35.5 217 54.5 255 54.5 255 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 236 42.5 0 22 3 -bam ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=bam,
			pos="236,45",
			rects="217,35.5,255,54.5",
			width=0.52778];
		mark_duplicates_metrics_file	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 259 35.5 259 54.5 419 54.5 419 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 339 42.5 0 144 28 -mark_duplicates_metrics_file ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=mark_duplicates_metrics_file,
			pos="339,45",
			rects="259,35.5,419,54.5",
			width=2.2222];
	}
	downsample	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 99.5 125.5 99.5 144.5 254.5 144.5 254.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 177 132.5 0 139 24 -downsample unaligned BAM ",
		height=0.27778,
		label="downsample unaligned BAM",
		pos="177,135",
		rects="99.5,125.5,254.5,144.5",
		width=2.1528];
	bams -> downsample	[_draw_="c 7 -#000000 B 4 179.5 178.58 179.09 171.52 178.48 161.24 177.97 152.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 180.43 152.62 177.58 145.78 175.54 152.91 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 187 155.6 0 18 3 -sam ",
		label=sam,
		lp="187,157.5",
		pos="e,177.49,144.26 179.5,178.58 179.09,171.52 178.48,161.24 177.97,152.55"];
	align_workflow	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 220 80.5 220 99.5 354 99.5 354 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 287 87.5 0 118 21 -Unaligned BAM to BQSR ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="Unaligned BAM to BQSR",
		pos="287,90",
		rects="220,80.5,354,99.5",
		width=1.8611];
	readgroups -> align_workflow	[_draw_="c 7 -#000000 B 7 309.09 178.81 309.03 166.8 308.16 143.77 303 125 301.3 118.83 298.56 112.4 295.82 106.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 298.04 105.76 292.63 100.69 293.69 108.03 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 330 133.1 0 48 10 -readgroups ",
		label=readgroups,
		lp="330,135",
		pos="e,291.93,99.351 309.09,178.81 309.03,166.8 308.16,143.77 303,125 301.3,118.83 298.56,112.4 295.82,106.81"];
	downsample_probability -> downsample	[_draw_="c 7 -#000000 B 7 95.19 178.65 104.59 171.23 119.14 160.44 133 153 136.51 151.11 140.28 149.33 144.08 147.68 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 144.91 149.99 150.45 145.06 143.05 145.46 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 155 155.6 0 44 11 -probability ",
		label=probability,
		lp="155,157.5",
		pos="e,151.85,144.48 95.188,178.65 104.59,171.23 119.14,160.44 133,153 136.51,151.11 140.28,149.33 144.08,147.68"];
	bqsr_known_sites -> align_workflow	[_draw_="c 7 -#000000 B 7 396.61 178.81 389.39 165.95 373.89 140.85 355 125 344.03 115.8 330.15 108.29 317.79 102.69 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 319.12 100.6 311.72 100.06 317.16 105.09 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 409.5 133.1 0 73 16 -bqsr_known_sites ",
		label=bqsr_known_sites,
		lp="409.5,135",
		pos="e,310.33,99.454 396.61,178.81 389.39,165.95 373.89,140.85 355,125 344.03,115.8 330.15,108.29 317.79,102.69"];
	reference -> downsample	[_draw_="c 7 -#000000 B 4 227.93 178.58 218.51 170.71 204.29 158.82 193.26 149.6 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 194.99 147.85 188.05 145.24 191.85 151.61 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 227 155.6 0 40 9 -reference ",
		label=reference,
		lp="227,157.5",
		pos="e,186.89,144.26 227.93,178.58 218.51,170.71 204.29,158.82 193.26,149.6"];
	reference -> align_workflow	[_draw_="c 7 -#000000 B 10 241.51 178.68 245.03 170.24 250.56 156.78 255 145 258.32 136.19 257.61 133.33 262 125 265.46 118.44 270.09 111.75 \
274.43 106.06 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 276.29 107.66 278.72 100.66 272.45 104.62 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 282 133.1 0 40 9 -reference ",
		label=reference,
		lp="282,135",
		pos="e,279.66,99.47 241.51,178.68 245.03,170.24 250.56,156.78 255,145 258.32,136.19 257.61,133.33 262,125 265.46,118.44 270.09,111.75 \
274.43,106.06"];
	downsample -> align_workflow	[_draw_="c 7 -#000000 B 7 194.89 125.59 206.5 120.27 222.01 113.4 236 108 241.21 105.99 246.76 103.99 252.22 102.11 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 252.82 104.49 258.67 99.93 251.25 99.85 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 247.5 110.6 0 23 4 -bams ",
		label=bams,
		lp="247.5,112.5",
		pos="e,260.1,99.445 194.89,125.59 206.5,120.27 222.01,113.4 236,108 241.21,105.99 246.76,103.99 252.22,102.11"];
	align_workflow -> bam	[_draw_="c 7 -#000000 B 4 277.17 80.71 270.11 74.76 260.44 66.61 252.25 59.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 253.89 57.88 246.96 55.24 250.73 61.63 ",
		pos="e,245.8,54.265 277.17,80.709 270.11,74.76 260.44,66.609 252.25,59.701"];
	align_workflow -> mark_duplicates_metrics_file	[_draw_="c 7 -#000000 B 4 297.27 80.5 304.4 74.62 314.04 66.64 322.26 59.84 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 323.75 61.79 327.58 55.44 320.63 58.02 ",
		pos="e,328.75,54.478 297.27,80.505 304.4,74.615 314.04,66.64 322.26,59.841"];
}