digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 458 522 458 522 0 ",
		bb="0,0,522,458",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
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	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
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	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
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	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 395 8 450 514 450 514 395 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 438 0 84 15 -Workflow Inputs ",
			bb="8,395,514,450",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,440.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		docm_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 218 403.5 218 422.5 282 422.5 282 403.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 250 410.5 0 48 8 -docm_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=docm_vcf,
			pos="250,413",
			rects="218,403.5,282,422.5",
			width=0.88889];
		filter_docm_variants	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16 403.5 16 422.5 132 422.5 132 403.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 74 410.5 0 100 20 -filter_docm_variants ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=filter_docm_variants,
			pos="74,413",
			rects="16,403.5,132,422.5",
			width=1.6111];
		tumor_bam	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 432.5 403.5 432.5 422.5 505.5 422.5 505.5 403.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 469 410.5 0 57 9 -tumor_bam ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=tumor_bam,
			pos="469,413",
			rects="432.5,403.5,505.5,422.5",
			width=1.0139];
		normal_bam	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 136 403.5 136 422.5 214 422.5 214 403.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 175 410.5 0 62 10 -normal_bam ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=normal_bam,
			pos="175,413",
			rects="136,403.5,214,422.5",
			width=1.0833];
		interval_list	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 354 403.5 354 422.5 428 422.5 428 403.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 391 410.5 0 58 13 -interval_list ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=interval_list,
			pos="391,413",
			rects="354,403.5,428,422.5",
			width=1.0278];
		reference	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 286.5 403.5 286.5 422.5 349.5 422.5 349.5 403.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 318 410.5 0 47 9 -reference ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=reference,
			pos="318,413",
			rects="286.5,403.5,349.5,422.5",
			width=0.875];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 175 8 175 63 301 63 301 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 229 15 0 92 16 -Workflow Outputs ",
			bb="175,8,301,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="229,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		docm_variants_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 183.5 35.5 183.5 54.5 292.5 54.5 292.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 238 42.5 0 93 17 -docm_variants_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=docm_variants_vcf,
			pos="238,45",
			rects="183.5,35.5,292.5,54.5",
			width=1.5139];
	}
	GATK_haplotype_caller	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 221 350.5 221 369.5 359 369.5 359 350.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 290 357.5 0 122 23 -HaplotypeCaller (GATK4) ",
		height=0.27778,
		label="HaplotypeCaller (GATK4)",
		pos="290,360",
		rects="221,350.5,359,369.5",
		width=1.9167];
	docm_vcf -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 250.39 403.64 251.13 396.21 253.21 385.41 259 378 260.02 376.69 261.17 375.48 262.41 374.34 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 263.81 376.36 267.98 370.23 260.89 372.42 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 278.5 380.6 0 39 8 -docm_vcf ",
		label=docm_vcf,
		lp="278.5,382.5",
		pos="e,269.2,369.33 250.39,403.64 251.13,396.21 253.21,385.41 259,378 260.02,376.69 261.17,375.48 262.41,374.34"];
	docm_filter	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 135.5 170.5 135.5 189.5 340.5 189.5 340.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 238 177.5 0 189 38 -Filter variants from the DoCM detector ",
		height=0.27778,
		label="Filter variants from the DoCM detector",
		pos="238,180",
		rects="135.5,170.5,340.5,189.5",
		width=2.8472];
	filter_docm_variants -> docm_filter	[_draw_="c 7 -#000000 B 10 75.84 403.74 77.91 393.7 81 376.19 81 361 81 361 81 361 81 224 81 207.64 113.09 197.29 148.26 190.85 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 148.31 193.33 154.79 189.72 147.47 188.5 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 122 290.6 0 82 20 -filter_docm_variants ",
		label=filter_docm_variants,
		lp="122,292.5",
		pos="e,156.28,189.46 75.839,403.74 77.913,393.7 81,376.19 81,361 81,361 81,361 81,224 81,207.64 113.09,197.29 148.26,190.85"];
	tumor_bam -> docm_filter	[_draw_="c 7 -#000000 B 10 468.47 403.7 467.88 393.61 467 376.06 467 361 467 361 467 361 467 224 467 197.54 407.18 186.89 348.68 182.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 349.1 180.38 341.95 182.37 348.78 185.27 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 490 290.6 0 46 9 -tumor_bam ",
		label=tumor_bam,
		lp="490,292.5",
		pos="e,340.44,182.27 468.47,403.7 467.88,393.61 467,376.06 467,361 467,361 467,361 467,224 467,197.54 407.18,186.89 348.68,182.81"];
	tumor_bam -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 456.79 403.57 444.7 395.66 425.39 384.16 407 378 394.35 373.77 380.57 370.59 367.07 368.2 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 367.51 365.79 360.2 367.06 366.7 370.62 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 435.5 380.6 0 19 3 -bam ",
		label=bam,
		lp="435.5,382.5",
		pos="e,358.71,366.81 456.79,403.57 444.7,395.66 425.39,384.16 407,378 394.35,373.77 380.57,370.59 367.07,368.2"];
	normal_bam -> docm_filter	[_draw_="c 7 -#000000 B 10 175.53 403.7 176.12 393.61 177 376.06 177 361 177 361 177 361 177 224 177 209.7 188.33 199.74 201.23 193.04 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 202.24 195.27 207.56 190.09 200.18 190.82 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 202.5 290.6 0 51 10 -normal_bam ",
		label=normal_bam,
		lp="202.5,292.5",
		pos="e,208.93,189.45 175.53,403.7 176.12,393.61 177,376.06 177,361 177,361 177,361 177,224 177,209.7 188.33,199.74 201.23,193.04"];
	normal_bam -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 179.36 403.58 183.92 395.68 191.82 384.18 202 378 205.65 375.79 209.52 373.85 213.54 372.16 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 214.3 374.5 219.99 369.74 212.57 369.91 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 227.5 380.6 0 51 10 -normal_bam ",
		label=normal_bam,
		lp="227.5,382.5",
		pos="e,221.4,369.21 179.36,403.58 183.92,395.68 191.82,384.18 202,378 205.65,375.79 209.52,373.85 213.54,372.16"];
	interval_list -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 381.76 403.69 372.88 396.09 358.83 384.99 345 378 340.77 375.86 336.22 373.93 331.62 372.21 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 332.71 369.99 325.29 370 331.09 374.62 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 382.5 380.6 0 47 13 -interval_list ",
		label=interval_list,
		lp="382.5,382.5",
		pos="e,323.86,369.5 381.76,403.69 372.88,396.09 358.83,384.99 345,378 340.77,375.86 336.22,373.93 331.62,372.21"];
	reference -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 4 313.38 403.58 309.34 396.23 303.38 385.37 298.49 376.46 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 300.78 375.55 295.27 370.59 296.49 377.91 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 324 380.6 0 40 9 -reference ",
		label=reference,
		lp="324,382.5",
		pos="e,294.54,369.26 313.38,403.58 309.34,396.23 303.38,385.37 298.49,376.46"];
	bgzip	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 225.5 305.5 225.5 324.5 290.5 324.5 290.5 305.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 258 312.5 0 49 9 -bgzip VCF ",
		height=0.27778,
		label="bgzip VCF",
		pos="258,315",
		rects="225.5,305.5,290.5,324.5",
		width=0.90278];
	index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 223 260.5 223 279.5 285 279.5 285 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 254 267.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="254,270",
		rects="223,260.5,285,279.5",
		width=0.86111];
	bgzip -> index	[_draw_="c 7 -#000000 B 4 257.23 305.71 256.75 300.59 256.13 293.85 255.55 287.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 258 287.52 254.91 280.77 253.12 287.97 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 262.5 290.6 0 13 3 -vcf ",
		label=vcf,
		lp="262.5,292.5",
		pos="e,254.77,279.27 257.23,305.71 256.75,300.59 256.13,293.85 255.55,287.67"];
	bgzip2	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 205.5 125.5 205.5 144.5 270.5 144.5 270.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 238 132.5 0 49 9 -bgzip VCF ",
		height=0.27778,
		label="bgzip VCF",
		pos="238,135",
		rects="205.5,125.5,270.5,144.5",
		width=0.90278];
	index2	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 207 80.5 207 99.5 269 99.5 269 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 238 87.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="238,90",
		rects="207,80.5,269,99.5",
		width=0.86111];
	bgzip2 -> index2	[_draw_="c 7 -#000000 B 4 238 125.71 238 120.59 238 113.85 238 107.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 240.45 107.78 238 100.78 235.55 107.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 244.5 110.6 0 13 3 -vcf ",
		label=vcf,
		lp="244.5,112.5",
		pos="e,238,99.265 238,125.71 238,120.59 238,113.85 238,107.67"];
	index2 -> docm_variants_vcf	[_draw_="c 7 -#000000 B 4 238 80.71 238 75.59 238 68.85 238 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 240.45 62.78 238 55.78 235.55 62.78 ",
		pos="e,238,54.265 238,80.709 238,75.593 238,68.848 238,62.666"];
	docm_filter -> bgzip2	[_draw_="c 7 -#000000 B 4 238 170.71 238 165.59 238 158.85 238 152.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 240.45 152.78 238 145.78 235.55 152.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 244.5 155.6 0 13 4 -file ",
		label=file,
		lp="244.5,157.5",
		pos="e,238,144.27 238,170.71 238,165.59 238,158.85 238,152.67"];
	decompose	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 197 215.5 197 234.5 301 234.5 301 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 249 222.5 0 88 16 -run vt decompose ",
		height=0.27778,
		label="run vt decompose",
		pos="249,225",
		rects="197,215.5,301,234.5",
		width=1.4444];
	decompose -> docm_filter	[_draw_="c 7 -#000000 B 4 246.88 215.71 245.54 210.47 243.76 203.53 242.15 197.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 244.6 196.91 240.49 190.73 239.85 198.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 283.5 200.6 0 79 17 -docm_raw_variants ",
		label=docm_raw_variants,
		lp="283.5,202.5",
		pos="e,240.11,189.27 246.88,215.71 245.54,210.47 243.76,203.53 242.15,197.24"];
	GATK_haplotype_caller -> bgzip	[_draw_="c 7 -#000000 B 4 283.83 350.71 279.67 345.12 274.06 337.58 269.13 330.96 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 271.2 329.63 265.05 325.48 267.27 332.56 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 282.5 335.6 0 13 4 -file ",
		label=file,
		lp="282.5,337.5",
		pos="e,264.15,324.27 283.83,350.71 279.67,345.12 274.06,337.58 269.13,330.96"];
	index -> decompose	[_draw_="c 7 -#000000 B 4 253.04 260.71 252.44 255.59 251.66 248.85 250.94 242.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 253.38 242.44 250.14 235.77 248.51 243 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 257.5 245.6 0 13 3 -vcf ",
		label=vcf,
		lp="257.5,247.5",
		pos="e,249.96,234.27 253.04,260.71 252.44,255.59 251.66,248.85 250.94,242.67"];
}