digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 323 402 323 402 0 ",
		bb="0,0,402,323",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
	];
	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 260 8 315 394 315 394 260 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 303 0 84 15 -Workflow Inputs ",
			bb="8,260,394,315",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,305.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		tumor_bam	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 312.5 268.5 312.5 287.5 385.5 287.5 385.5 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 349 275.5 0 57 9 -tumor_bam ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=tumor_bam,
			pos="349,278",
			rects="312.5,268.5,385.5,287.5",
			width=1.0139];
		normal_bam	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 230 268.5 230 287.5 308 287.5 308 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 269 275.5 0 62 10 -normal_bam ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=normal_bam,
			pos="269,278",
			rects="230,268.5,308,287.5",
			width=1.0833];
		reference	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 84.5 268.5 84.5 287.5 147.5 287.5 147.5 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 116 275.5 0 47 9 -reference ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=reference,
			pos="116,278",
			rects="84.5,268.5,147.5,287.5",
			width=0.875];
		docm_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16 268.5 16 287.5 80 287.5 80 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 48 275.5 0 48 8 -docm_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=docm_vcf,
			pos="48,278",
			rects="16,268.5,80,287.5",
			width=0.88889];
		interval_list	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 152 268.5 152 287.5 226 287.5 226 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 189 275.5 0 58 13 -interval_list ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=interval_list,
			pos="189,278",
			rects="152,268.5,226,287.5",
			width=1.0278];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 158 8 158 63 333 63 333 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 212 15 0 92 16 -Workflow Outputs ",
			bb="158,8,333,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="212,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		unfiltered_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 166.5 35.5 166.5 54.5 249.5 54.5 249.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 208 42.5 0 67 14 -unfiltered_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=unfiltered_vcf,
			pos="208,45",
			rects="166.5,35.5,249.5,54.5",
			width=1.1528];
		filtered_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 253.5 35.5 253.5 54.5 324.5 54.5 324.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 289 42.5 0 55 12 -filtered_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=filtered_vcf,
			pos="289,45",
			rects="253.5,35.5,324.5,54.5",
			width=0.98611];
	}
	docm_filter	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 255.5 170.5 255.5 189.5 324.5 189.5 324.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 290 177.5 0 53 11 -docm filter ",
		height=0.27778,
		label="docm filter",
		pos="290,180",
		rects="255.5,170.5,324.5,189.5",
		width=0.95833];
	tumor_bam -> docm_filter	[_draw_="c 7 -#000000 B 7 349.99 268.66 351.07 256.04 351.42 231.78 341 215 335.43 206.03 326.52 198.91 317.69 193.54 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 319 191.47 311.69 190.19 316.61 195.74 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 371 223.1 0 46 9 -tumor_bam ",
		label=tumor_bam,
		lp="371,225",
		pos="e,310.37,189.45 349.99,268.66 351.07,256.04 351.42,231.78 341,215 335.43,206.03 326.52,198.91 317.69,193.54"];
	GATK_haplotype_caller	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 132 215.5 132 234.5 282 234.5 282 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 207 222.5 0 134 26 -HaplotypeCaller (GATK 3.6) ",
		height=0.27778,
		label="HaplotypeCaller (GATK 3.6)",
		pos="207,225",
		rects="132,215.5,282,234.5",
		width=2.0833];
	tumor_bam -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 336.23 268.54 324.05 260.83 304.95 249.67 287 243 280.16 240.46 272.84 238.25 265.51 236.35 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 266.42 234.05 259.04 234.76 265.25 238.81 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 315.5 245.6 0 19 3 -bam ",
		label=bam,
		lp="315.5,247.5",
		pos="e,257.57,234.4 336.23,268.54 324.05,260.83 304.95,249.67 287,243 280.16,240.46 272.84,238.25 265.51,236.35"];
	normal_bam -> docm_filter	[_draw_="c 7 -#000000 B 7 274.85 268.61 277.81 263.93 281.15 257.88 283 252 288.66 233.97 290.06 212.21 290.27 197.57 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 292.72 197.6 290.27 190.61 287.82 197.61 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 314.5 223.1 0 51 10 -normal_bam ",
		label=normal_bam,
		lp="314.5,225",
		pos="e,290.26,189.09 274.85,268.61 277.81,263.93 281.15,257.88 283,252 288.66,233.97 290.06,212.21 290.27,197.57"];
	normal_bam -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 256.79 268.53 250.2 263.84 242 257.79 235 252 230.57 248.34 225.94 244.18 221.74 240.27 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 223.46 238.53 216.69 235.5 220.1 242.09 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 260.5 245.6 0 51 10 -normal_bam ",
		label=normal_bam,
		lp="260.5,247.5",
		pos="e,215.6,234.46 256.79,268.53 250.2,263.84 242,257.79 235,252 230.57,248.34 225.94,244.18 221.74,240.27"];
	reference -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 118.72 268.7 121.72 260.88 127.3 249.44 136 243 138.62 241.06 141.43 239.34 144.36 237.82 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 145.14 240.15 150.5 235.03 143.11 235.69 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 156 245.6 0 40 9 -reference ",
		label=reference,
		lp="156,247.5",
		pos="e,151.88,234.41 118.72,268.7 121.72,260.88 127.3,249.44 136,243 138.62,241.06 141.43,239.34 144.36,237.82"];
	docm_vcf -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 55.05 268.77 62.4 260.77 74.7 248.99 88 243 99.24 237.94 111.63 234.31 124.03 231.72 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 124.28 234.16 130.69 230.44 123.36 229.35 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 107.5 245.6 0 39 8 -docm_vcf ",
		label=docm_vcf,
		lp="107.5,247.5",
		pos="e,132.18,230.16 55.047,268.77 62.403,260.77 74.704,248.99 88,243 99.239,237.94 111.63,234.31 124.03,231.72"];
	interval_list -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 183.12 268.76 178.8 261.61 174.41 251.15 179 243 179.61 241.92 180.32 240.89 181.11 239.93 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 182.56 241.92 186.11 235.4 179.27 238.29 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 202.5 245.6 0 47 13 -interval_list ",
		label=interval_list,
		lp="202.5,247.5",
		pos="e,187.23,234.39 183.12,268.76 178.8,261.61 174.41,251.15 179,243 179.61,241.92 180.32,240.89 181.11,239.93"];
	bgzip	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 257.5 125.5 257.5 144.5 322.5 144.5 322.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 290 132.5 0 49 9 -bgzip VCF ",
		height=0.27778,
		label="bgzip VCF",
		pos="290,135",
		rects="257.5,125.5,322.5,144.5",
		width=0.90278];
	docm_filter -> bgzip	[_draw_="c 7 -#000000 B 4 290 170.71 290 165.59 290 158.85 290 152.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 292.45 152.78 290 145.78 287.55 152.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 296.5 155.6 0 13 4 -file ",
		label=file,
		lp="296.5,157.5",
		pos="e,290,144.27 290,170.71 290,165.59 290,158.85 290,152.67"];
	index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 259 80.5 259 99.5 321 99.5 321 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 290 87.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="290,90",
		rects="259,80.5,321,99.5",
		width=0.86111];
	bgzip -> index	[_draw_="c 7 -#000000 B 4 290 125.71 290 120.59 290 113.85 290 107.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 292.45 107.78 290 100.78 287.55 107.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 296.5 110.6 0 13 3 -vcf ",
		label=vcf,
		lp="296.5,112.5",
		pos="e,290,99.265 290,125.71 290,120.59 290,113.85 290,107.67"];
	GATK_haplotype_caller -> unfiltered_vcf	[_draw_="c 7 -#000000 B 10 207.31 215.76 207.6 207.1 208 193.1 208 181 208 181 208 181 208 89 208 80.31 208 70.63 208 62.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 210.45 62.76 208 55.76 205.55 62.76 ",
		pos="e,208,54.243 207.31,215.76 207.6,207.1 208,193.1 208,181 208,181 208,181 208,89 208,80.308 208,70.627 208,62.655"];
	GATK_haplotype_caller -> docm_filter	[_draw_="c 7 -#000000 B 7 218.2 215.58 225.78 210.11 236.18 203.09 246 198 249.72 196.07 253.71 194.23 257.72 192.53 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 258.41 194.89 263.97 189.99 256.56 190.35 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 266 200.6 0 40 8 -docm_out ",
		label=docm_out,
		lp="266,202.5",
		pos="e,265.37,189.42 218.2,215.58 225.78,210.11 236.18,203.09 246,198 249.72,196.07 253.71,194.23 257.72,192.53"];
	index -> filtered_vcf	[_draw_="c 7 -#000000 B 4 289.81 80.71 289.69 75.59 289.53 68.85 289.39 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 291.84 62.72 289.23 55.78 286.94 62.83 ",
		pos="e,289.19,54.265 289.81,80.709 289.69,75.593 289.53,68.848 289.39,62.666"];
}