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		label=adapter_trim_end,
		lp="873,247.5",
		pos="e,887.23,234.49 753.77,268.53 774.76,260.7 807.59,249.35 837,243 850.47,240.09 864.74,237.66 878.9,235.64"];
	ribosomal_intervals -> generate_qc_metrics	[_draw_="c 7 -#000000 B 10 1799.05 268.74 1790.77 259.23 1779 242.77 1779 226 1779 226 1779 226 1779 134 1779 100.92 1687.76 92.37 1618.98 \
90.62 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1619.28 88.18 1612.23 90.48 1619.17 93.08 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1819 178.1 0 80 19 -ribosomal_intervals ",
		label=ribosomal_intervals,
		lp="1819,180",
		pos="e,1610.7,90.443 1799.1,268.74 1790.8,259.23 1779,242.77 1779,226 1779,226 1779,226 1779,134 1779,100.92 1687.8,92.369 1619,90.623"];
	trimming_min_readlength -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 7 891.78 268.51 899.3 260.78 911.4 249.59 924 243 928.24 240.78 932.8 238.83 937.45 237.13 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 938.05 239.51 943.9 234.96 936.49 234.87 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 956 245.6 0 64 14 -min_readlength ",
		label=min_readlength,
		lp="956,247.5",
		pos="e,945.34,234.48 891.78,268.51 899.3,260.78 911.4,249.59 924,243 928.24,240.78 932.8,238.83 937.45,237.13"];
	read_group_id -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 10 1089.96 268.51 1083.19 263.7 1074.59 257.56 1067 252 1061.62 248.06 1061.01 245.88 1055 243 1050.13 240.67 1044.89 \
238.63 1039.58 236.86 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1040.63 234.62 1033.22 234.89 1039.18 239.3 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1096 245.6 0 58 13 -read_group_id ",
		label=read_group_id,
		lp="1096,247.5",
		pos="e,1031.8,234.44 1090,268.51 1083.2,263.7 1074.6,257.56 1067,252 1061.6,248.06 1061,245.88 1055,243 1050.1,240.67 1044.9,238.63 1039.6,\
236.86"];
	trimming_adapter_min_overlap -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 10 1183.56 268.5 1167.27 264.69 1149.43 259.34 1134 252 1127.98 249.13 1128.18 245.5 1122 243 1115.96 240.55 1109.66 \
238.44 1103.22 236.61 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1103.85 234.25 1096.46 234.83 1102.6 238.98 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1177 245.6 0 86 19 -adapter_min_overlap ",
		label=adapter_min_overlap,
		lp="1177,247.5",
		pos="e,1095,234.45 1183.6,268.5 1167.3,264.69 1149.4,259.34 1134,252 1128,249.13 1128.2,245.5 1122,243 1116,240.55 1109.7,238.44 1103.2,\
236.61"];
	transcript_to_gene	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 760.5 80.5 760.5 99.5 903.5 99.5 903.5 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 832 87.5 0 127 26 -Kallisto: TranscriptToGene ",
		height=0.27778,
		label="Kallisto: TranscriptToGene",
		pos="832,90",
		rects="760.5,80.5,903.5,99.5",
		width=1.9861];
	gene_transcript_lookup_table -> transcript_to_gene	[_draw_="c 7 -#000000 B 10 132.02 268.51 184.03 256.01 274 233.31 274 226 274 226 274 226 274 134 274 110.29 598.61 97.73 752.66 93.11 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 752.33 95.57 759.25 92.91 752.18 90.67 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 334.5 178.1 0 121 28 -gene_transcript_lookup_table ",
		label=gene_transcript_lookup_table,
		lp="334.5,180",
		pos="e,760.76,92.868 132.02,268.51 184.03,256.01 274,233.31 274,226 274,226 274,226 274,134 274,110.29 598.61,97.731 752.66,93.109"];
	reference_index -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 7 1000.85 268.62 997.72 263.95 994.13 257.9 992 252 990.94 249.08 990.17 245.87 989.6 242.74 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 992.04 242.51 988.67 235.9 987.18 243.17 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1025 245.6 0 66 15 -reference_index ",
		label=reference_index,
		lp="1025,247.5",
		pos="e,988.47,234.4 1000.8,268.62 997.72,263.95 994.13,257.9 992,252 990.94,249.08 990.17,245.87 989.6,242.74"];
	refFlat -> generate_qc_metrics	[_draw_="c 7 -#000000 B 10 1720.42 268.73 1718.65 258.67 1716 241.16 1716 226 1716 226 1716 226 1716 134 1716 112.66 1665.53 101.82 1619.27 \
96.37 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1619.73 93.95 1612.5 95.61 1619.18 98.82 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1729.5 178.1 0 27 7 -refFlat ",
		label=refFlat,
		lp="1729.5,180",
		pos="e,1611,95.444 1720.4,268.73 1718.6,258.67 1716,241.16 1716,226 1716,226 1716,226 1716,134 1716,112.66 1665.5,101.82 1619.3,96.369"];
	read_group_fields -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 13 1351.46 268.52 1341.82 265.37 1330.49 262.06 1320 260 1280.16 252.18 1266.92 266.51 1229 252 1222.77 249.62 1223.24 \
245.34 1217 243 1197.97 235.86 1157.78 231.72 1116.3 229.31 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1116.62 226.87 1109.5 228.93 1116.35 231.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1265.5 245.6 0 73 17 -read_group_fields ",
		label=read_group_fields,
		lp="1265.5,247.5",
		pos="e,1108,228.85 1351.5,268.52 1341.8,265.37 1330.5,262.06 1320,260 1280.2,252.18 1266.9,266.51 1229,252 1222.8,249.62 1223.2,245.34 \
1217,243 1198,235.86 1157.8,231.72 1116.3,229.31"];
	kallisto_index -> kallisto	[_draw_="c 7 -#000000 B 7 242.35 268.57 250.25 265.53 259.45 262.3 268 260 513.24 194.16 815.23 155.46 935.24 141.72 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 935.38 144.17 942.06 140.95 934.82 139.3 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 573.5 200.6 0 55 14 -kallisto_index ",
		label=kallisto_index,
		lp="573.5,202.5",
		pos="e,943.56,140.78 242.35,268.57 250.25,265.53 259.45,262.3 268,260 513.24,194.16 815.23,155.46 935.24,141.72"];
	merge	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1349 170.5 1349 189.5 1459 189.5 1459 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1404 177.5 0 94 15 -Sambamba: merge ",
		height=0.27778,
		label="Sambamba: merge",
		pos="1404,180",
		rects="1349,170.5,1459,189.5",
		width=1.5278];
	merge -> stringtie	[_draw_="c 7 -#000000 B 4 1427.71 170.5 1446.28 163.85 1472.28 154.53 1492.59 147.26 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1493.15 149.66 1498.92 144.99 1491.5 145.04 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1483.5 155.6 0 19 3 -bam ",
		label=bam,
		lp="1483.5,157.5",
		pos="e,1500.3,144.48 1427.7,170.5 1446.3,163.85 1472.3,154.53 1492.6,147.26"];
	index_bam	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1358 125.5 1358 144.5 1450 144.5 1450 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1404 132.5 0 76 14 -samtools index ",
		height=0.27778,
		label="samtools index",
		pos="1404,135",
		rects="1358,125.5,1450,144.5",
		width=1.2778];
	merge -> index_bam	[_draw_="c 7 -#000000 B 4 1404 170.71 1404 165.59 1404 158.85 1404 152.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1406.45 152.78 1404 145.78 1401.55 152.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1413.5 155.6 0 19 3 -bam ",
		label=bam,
		lp="1413.5,157.5",
		pos="e,1404,144.27 1404,170.71 1404,165.59 1404,158.85 1404,152.67"];
	transcript_to_gene -> gene_abundance	[_draw_="c 7 -#000000 B 4 832 80.71 832 75.59 832 68.85 832 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 834.45 62.78 832 55.78 829.55 62.78 ",
		pos="e,832,54.265 832,80.709 832,75.593 832,68.848 832,62.666"];
	generate_qc_metrics -> chart	[_draw_="c 7 -#000000 B 4 1546.12 80.71 1547.46 75.47 1549.24 68.53 1550.85 62.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1553.15 63.12 1552.51 55.73 1548.4 61.91 ",
		pos="e,1552.9,54.265 1546.1,80.709 1547.5,75.474 1549.2,68.534 1550.8,62.235"];
	generate_qc_metrics -> metrics	[_draw_="c 7 -#000000 B 4 1536.29 80.71 1530.86 74.88 1523.47 66.93 1517.13 60.12 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1519.28 58.83 1512.72 55.37 1515.69 62.17 ",
		pos="e,1511.7,54.265 1536.3,80.709 1530.9,74.879 1523.5,66.934 1517.1,60.117"];
	bam_to_trimmed_fastq_and_hisat_alignments -> merge	[_draw_="c 7 -#000000 B 7 1107.68 222.26 1210.45 220.18 1345.78 215.8 1370 207 1377.23 204.37 1384.17 199.62 1389.87 194.89 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1391.22 196.97 1394.82 190.48 1387.96 193.31 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1396.5 200.6 0 23 4 -bams ",
		label=bams,
		lp="1396.5,202.5",
		pos="e,1395.9,189.48 1107.7,222.26 1210.4,220.18 1345.8,215.8 1370,207 1377.2,204.37 1384.2,199.62 1389.9,194.89"];
	bam_to_trimmed_fastq_and_hisat_alignments -> kallisto	[_draw_="c 7 -#000000 B 4 988 215.56 988 201.14 988 171.48 988 152.73 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 990.45 152.8 988 145.8 985.55 152.8 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1001 178.1 0 26 6 -fastqs ",
		label=fastqs,
		lp="1001,180",
		pos="e,988,144.28 988,215.56 988,201.14 988,171.48 988,152.73"];
	kallisto -> fusion_evidence	[_draw_="c 7 -#000000 B 4 982.82 125.56 973.77 110.81 954.93 80.11 943.49 61.46 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 945.62 60.26 939.87 55.57 941.45 62.82 ",
		pos="e,939.08,54.284 982.82,125.56 973.77,110.81 954.93,80.114 943.49,61.46"];
	kallisto -> transcript_abundance_tsv	[_draw_="c 7 -#000000 B 4 994.62 125.56 1006.29 110.67 1030.68 79.56 1045.27 60.96 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1047.18 62.5 1049.57 55.47 1043.32 59.47 ",
		pos="e,1050.5,54.284 994.62,125.56 1006.3,110.67 1030.7,79.565 1045.3,60.963"];
	kallisto -> transcript_abundance_h5	[_draw_="c 7 -#000000 B 4 1008.52 125.56 1047.03 109.73 1130.17 75.54 1173.86 57.57 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1174.6 59.92 1180.14 54.99 1172.74 55.38 ",
		pos="e,1181.5,54.412 1008.5,125.56 1047,109.73 1130.2,75.539 1173.9,57.57"];
	kallisto -> transcript_to_gene	[_draw_="c 7 -#000000 B 7 943.58 127.67 928.34 125 911.28 121.46 896 117 883 113.2 869.01 107.69 857.44 102.72 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 858.64 100.57 851.24 100.01 856.67 105.06 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 935.5 110.6 0 79 19 -transcript_table_h5 ",
		label=transcript_table_h5,
		lp="935.5,112.5",
		pos="e,849.86,99.398 943.58,127.67 928.34,125 911.28,121.46 896,117 883,113.2 869.01,107.69 857.44,102.72"];
	stringtie -> stringtie_gene_expression_tsv	[_draw_="c 7 -#000000 B 7 1553.73 126.47 1571.87 120.97 1594.97 112.32 1613 100 1628.41 89.47 1642.32 73.16 1651.35 61.22 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1653.26 62.76 1655.41 55.67 1649.3 59.87 ",
		pos="e,1656.3,54.444 1553.7,126.47 1571.9,120.97 1595,112.32 1613,100 1628.4,89.473 1642.3,73.165 1651.3,61.224"];
	stringtie -> stringtie_transcript_gtf	[_draw_="c 7 -#000000 B 7 1511.32 125.6 1501.31 118.88 1487.07 109.1 1475 100 1457.49 86.79 1438.14 70.78 1424.94 59.64 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1426.72 57.94 1419.8 55.28 1423.55 61.67 ",
		pos="e,1418.6,54.298 1511.3,125.6 1501.3,118.88 1487.1,109.1 1475,100 1457.5,86.791 1438.1,70.783 1424.9,59.64"];
	index_bam -> final_bam	[_draw_="c 7 -#000000 B 4 1394.8 125.56 1378.27 110.41 1343.41 78.46 1323.26 59.99 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1324.97 58.23 1318.15 55.31 1321.66 61.84 ",
		pos="e,1317,54.284 1394.8,125.56 1378.3,110.41 1343.4,78.458 1323.3,59.987"];
	index_bam -> generate_qc_metrics	[_draw_="c 7 -#000000 B 7 1414.21 125.67 1421.94 119.81 1433.04 112.28 1444 108 1451.89 104.92 1460.35 102.39 1468.89 100.32 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1469.31 102.74 1475.6 98.81 1468.23 97.96 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1453.5 110.6 0 19 3 -bam ",
		label=bam,
		lp="1453.5,112.5",
		pos="e,1477.1,98.479 1414.2,125.67 1421.9,119.81 1433,112.28 1444,108 1451.9,104.92 1460.4,102.39 1468.9,100.32"];
}