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			label=trna_cov,
			pos="2090,376",
			rects="2060.5,366.5,2119.5,385.5",
			width=0.81944];
		phased_proximal_variants_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 2124 366.5 2124 385.5 2290 385.5 2290 366.5 ",
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			fillcolor="#94DDF4",
			height=0.27778,
			label=phased_proximal_variants_vcf,
			pos="2207,376",
			rects="2124,366.5,2290,385.5",
			width=2.3056];
		binding_threshold	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 458 366.5 458 385.5 562 385.5 562 366.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 510 373.5 0 88 17 -binding_threshold ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=binding_threshold,
			pos="510,376",
			rects="458,366.5,562,385.5",
			width=1.4444];
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			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1643 373.5 0 126 26 -transcript_expression_file ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=transcript_expression_file,
			pos="1643,376",
			rects="1572,366.5,1714,385.5",
			width=1.9722];
		detect_variants_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 744.5 366.5 744.5 385.5 857.5 385.5 857.5 366.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 801 373.5 0 97 19 -detect_variants_vcf ",
			fillcolor="#94DDF4",
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			label=detect_variants_vcf,
			pos="801,376",
			rects="744.5,366.5,857.5,385.5",
			width=1.5694];
		peptide_sequence_length	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 2294.5 366.5 2294.5 385.5 2435.5 385.5 2435.5 366.5 ",
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			fillcolor="#94DDF4",
			height=0.27778,
			label=peptide_sequence_length,
			pos="2365,376",
			rects="2294.5,366.5,2435.5,385.5",
			width=1.9583];
	}
	pvacseq	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2643 88.5 2643 107.5 2721 107.5 2721 88.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2682 95.5 0 62 11 -run pVACseq ",
		height=0.27778,
		label="run pVACseq",
		pos="2682,98",
		rects="2643,88.5,2721,107.5",
		width=1.0833];
	sample_name -> pvacseq	[_draw_="c 7 -#000000 B 16 1323.3 366.58 1331.47 363.48 1341.07 360.19 1350 358 1405.31 344.46 1604 380.95 1604 324 1604 324 1604 324 1604 \
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1633 231.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="1633,233",
		pos="e,2643.1,99.065 1323.3,366.58 1331.5,363.48 1341.1,360.19 1350,358 1405.3,344.46 1604,380.95 1604,324 1604,324 1604,324 1604,142 \
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	tumor_rna_bam_readcount	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 884 313.5 884 332.5 1024 332.5 1024 313.5 ",
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		fillcolor="#F3CEA1",
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		label="bam_readcount workflow",
		pos="954,323",
		rects="884,313.5,1024,332.5",
		width=1.9444];
	sample_name -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 13 1283.22 366.53 1274.95 363.34 1265.16 360 1256 358 1214.17 348.86 1200.75 363.13 1160 350 1152.6 347.62 1152.39 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1032.56 325 1025.43 327.04 1032.28 329.89 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1175.5 343.6 0 31 6 -sample ",
		label=sample,
		lp="1175.5,345.5",
		pos="e,1023.9,326.95 1283.2,366.53 1275,363.34 1265.2,360 1256,358 1214.2,348.86 1200.8,363.13 1160,350 1152.6,347.62 1152.4,343.41 1145,\
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	add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1096.5 223.5 1096.5 242.5 1239.5 242.5 1239.5 223.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1168 230.5 0 127 26 -add expression info to vcf ",
		height=0.27778,
		label="add expression info to vcf",
		pos="1168,233",
		rects="1096.5,223.5,1239.5,242.5",
		width=1.9861];
	sample_name -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 10 1297.57 366.68 1289.39 353.87 1273.83 328.33 1264 305 1257.34 289.19 1264.56 280.67 1253 268 1243.42 257.5 1230.16 \
250.18 1216.95 245.11 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1218.06 242.91 1210.64 242.88 1216.43 247.53 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1293 298.6 0 58 11 -sample_name ",
		label=sample_name,
		lp="1293,300.5",
		pos="e,1209.2,242.38 1297.6,366.68 1289.4,353.87 1273.8,328.33 1264,305 1257.3,289.19 1264.6,280.67 1253,268 1243.4,257.5 1230.2,250.18 \
1217,245.11"];
	add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1254.5 178.5 1254.5 197.5 1397.5 197.5 1397.5 178.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1326 185.5 0 127 26 -add expression info to vcf ",
		height=0.27778,
		label="add expression info to vcf",
		pos="1326,188",
		rects="1254.5,178.5,1397.5,197.5",
		width=1.9861];
	sample_name -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 10 1309.53 366.5 1316.33 356.78 1326 340.12 1326 324 1326 324 1326 324 1326 232 1326 223.31 1326 213.63 1326 205.65 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1355 276.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="1355,278",
		pos="e,1326,197.24 1309.5,366.5 1316.3,356.78 1326,340.12 1326,324 1326,324 1326,324 1326,232 1326,223.31 1326,213.63 1326,205.65"];
	add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 1009 268.5 1009 287.5 1253 287.5 1253 268.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1131 275.5 0 228 46 -Add snv and indel bam-readcount files to a vcf ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="Add snv and indel bam-readcount files to a vcf",
		pos="1131,278",
		rects="1009,268.5,1253,287.5",
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	sample_name -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 10 1280.57 366.53 1250.67 355.16 1201.13 336.05 1198 333 1185.16 320.51 1195.2 308.11 1182 296 1180.19 294.34 1178.22 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1177.34 289.37 1170.02 288.17 1175 293.67 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1227 321.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="1227,323",
		pos="e,1168.7,287.45 1280.6,366.53 1250.7,355.16 1201.1,336.05 1198,333 1185.2,320.51 1195.2,308.11 1182,296 1180.2,294.34 1178.2,292.85 \
1176.1,291.5"];
	tdna_vaf -> pvacseq	[_draw_="c 7 -#000000 B 16 3761.98 366.5 3756.62 363.72 3750.58 360.67 3745 358 3711.25 341.87 3668 361.41 3668 324 3668 324 3668 324 3668 \
142 3668 75.97 3437.93 119.7 3372 116 3130.63 102.44 2841.17 99.69 2729.32 99.14 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2729.47 96.69 2722.45 99.11 2729.44 101.59 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3686 231.1 0 36 8 -tdna_vaf ",
		label=tdna_vaf,
		lp="3686,233",
		pos="e,2720.9,99.101 3762,366.5 3756.6,363.72 3750.6,360.67 3745,358 3711.2,341.87 3668,361.41 3668,324 3668,324 3668,324 3668,142 3668,\
75.969 3437.9,119.7 3372,116 3130.6,102.44 2841.2,99.694 2729.3,99.14"];
	add_vep_fields_to_table	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 721.5 35.5 721.5 54.5 878.5 54.5 878.5 35.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 800 42.5 0 141 28 -add VEP annotation to report ",
		height=0.27778,
		label="add VEP annotation to report",
		pos="800,45",
		rects="721.5,35.5,878.5,54.5",
		width=2.1806];
	vep_to_table_fields -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 10 102.96 366.57 122.85 359.06 145 345.8 145 324 145 324 145 324 145 97 145 68.83 535.3 53.76 713.33 48.35 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 713.21 50.81 720.13 48.15 713.06 45.91 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 166 208.6 0 42 10 -vep_fields ",
		label=vep_fields,
		lp="166,210.5",
		pos="e,721.64,48.102 102.96,366.57 122.85,359.06 145,345.8 145,324 145,324 145,324 145,97 145,68.825 535.3,53.759 713.33,48.352"];
	netmhc_stab -> pvacseq	[_draw_="c 7 -#000000 B 13 3835.05 366.68 3814.34 355.94 3782 337.08 3782 324 3782 324 3782 324 3782 142 3782 83.27 3577.63 119.49 3519 116 \
3218.68 98.13 2856.8 98.05 2729.26 98.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2729.34 96.22 2722.35 98.7 2729.37 101.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3808.5 231.1 0 53 11 -netmhc_stab ",
		label=netmhc_stab,
		lp="3808.5,233",
		pos="e,2720.8,98.71 3835.1,366.68 3814.3,355.94 3782,337.08 3782,324 3782,324 3782,324 3782,142 3782,83.271 3577.6,119.49 3519,116 3218.7,\
98.133 2856.8,98.045 2729.3,98.666"];
	net_chop_method -> pvacseq	[_draw_="c 7 -#000000 B 13 3929.46 366.53 3914.18 358.13 3895 343.67 3895 324 3895 324 3895 324 3895 142 3895 87.25 3704.65 119.37 3650 116 \
3467.79 104.75 2897.84 100.35 2729.36 99.28 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2729.47 96.83 2722.45 99.23 2729.44 101.73 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3931.5 231.1 0 73 15 -net_chop_method ",
		label=net_chop_method,
		lp="3931.5,233",
		pos="e,2720.9,99.225 3929.5,366.53 3914.2,358.13 3895,343.67 3895,324 3895,324 3895,324 3895,142 3895,87.25 3704.6,119.37 3650,116 3467.8,\
104.75 2897.8,100.35 2729.4,99.278"];
	top_score_metric -> pvacseq	[_draw_="c 7 -#000000 B 13 4042.78 366.79 4031.02 357.81 4015 342.23 4015 324 4015 324 4015 324 4015 142 4015 87.47 3825.43 119.32 3771 116 \
3563.73 103.37 2910.51 99.9 2729.12 99.17 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2729.37 96.72 2722.36 99.14 2729.35 101.62 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 4050 231.1 0 70 16 -top_score_metric ",
		label=top_score_metric,
		lp="4050,233",
		pos="e,2720.8,99.134 4042.8,366.79 4031,357.81 4015,342.23 4015,324 4015,324 4015,324 4015,142 4015,87.471 3825.4,119.32 3771,116 3563.7,\
103.37 2910.5,99.897 2729.1,99.167"];
	readcount_minimum_mapping_quality -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 7 1122.53 366.57 1096.84 359.53 1059.09 349.33 1026 341 1017.23 338.79 1007.83 336.51 998.82 334.36 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 999.53 332.01 992.15 332.79 998.4 336.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1100.5 343.6 0 87 19 -min_mapping_quality ",
		label=min_mapping_quality,
		lp="1100.5,345.5",
		pos="e,990.68,332.44 1122.5,366.57 1096.8,359.53 1059.1,349.33 1026,341 1017.2,338.79 1007.8,336.51 998.82,334.36"];
	maximum_transcript_support_level -> pvacseq	[_draw_="c 7 -#000000 B 13 4181.56 366.6 4164 358.64 4143 344.77 4143 324 4143 324 4143 324 4143 142 4143 85.7 3947.2 119.29 3891 116 3658.83 \
102.42 2922.81 99.61 2729.1 99.1 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2729.34 96.65 2722.33 99.09 2729.33 101.55 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 4214 231.1 0 142 32 -maximum_transcript_support_level ",
		label=maximum_transcript_support_level,
		lp="4214,233",
		pos="e,2720.8,99.081 4181.6,366.6 4164,358.64 4143,344.77 4143,324 4143,324 4143,324 4143,142 4143,85.703 3947.2,119.29 3891,116 3658.8,\
102.42 2922.8,99.612 2729.1,99.103"];
	exclude_nas -> pvacseq	[_draw_="c 7 -#000000 B 10 4335.9 366.59 4328.51 356.95 4318 340.37 4318 324 4318 324 4318 324 4318 142 4318 101.16 2997.41 98.99 2729.19 \
98.98 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2729.34 96.53 2722.34 98.98 2729.34 101.43 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 4343.5 231.1 0 51 11 -exclude_nas ",
		label=exclude_nas,
		lp="4343.5,233",
		pos="e,2720.8,98.977 4335.9,366.59 4328.5,356.95 4318,340.37 4318,324 4318,324 4318,324 4318,142 4318,101.16 2997.4,98.995 2729.2,98.977"];
	net_chop_threshold -> pvacseq	[_draw_="c 7 -#000000 B 10 2505.13 366.56 2514.28 357.14 2527 340.99 2527 324 2527 324 2527 324 2527 142 2527 119.33 2589.37 108.11 2634.98 \
102.95 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2635.09 105.4 2641.78 102.21 2634.56 100.53 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2567.5 231.1 0 81 18 -net_chop_threshold ",
		label=net_chop_threshold,
		lp="2567.5,233",
		pos="e,2643.3,102.05 2505.1,366.56 2514.3,357.14 2527,340.99 2527,324 2527,324 2527,324 2527,142 2527,119.33 2589.4,108.11 2635,102.95"];
	gene_expression_file -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 7 1408.22 366.56 1402.97 341.89 1387.71 271.42 1384 268 1378.64 263.06 1302.02 251.82 1241.54 243.61 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1241.89 241.18 1234.62 242.67 1241.23 246.04 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1424.5 298.6 0 61 15 -expression_file ",
		label=expression_file,
		lp="1424.5,300.5",
		pos="e,1233.1,242.47 1408.2,366.56 1403,341.89 1387.7,271.42 1384,268 1378.6,263.06 1302,251.82 1241.5,243.61"];
	readcount_minimum_base_quality -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 4 954 366.58 954 359.52 954 349.24 954 340.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 956.45 340.78 954 333.78 951.55 340.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 989.5 343.6 0 71 16 -min_base_quality ",
		label=min_base_quality,
		lp="989.5,345.5",
		pos="e,954,332.26 954,366.58 954,359.52 954,349.24 954,340.55"];
	prediction_algorithms -> pvacseq	[_draw_="c 7 -#000000 B 10 2620.63 366.79 2623.59 356.8 2628 339.34 2628 324 2628 324 2628 324 2628 142 2628 128.3 2638.76 118.27 2650.68 \
111.35 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2651.75 113.56 2656.82 108.14 2649.48 109.21 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2672.5 231.1 0 89 21 -prediction_algorithms ",
		label=prediction_algorithms,
		lp="2672.5,233",
		pos="e,2658.2,107.44 2620.6,366.79 2623.6,356.8 2628,339.34 2628,324 2628,324 2628,324 2628,142 2628,128.3 2638.8,118.27 2650.7,111.35"];
	additional_report_columns -> pvacseq	[_draw_="c 7 -#000000 B 10 2751.26 366.77 2745.04 357.02 2736 340.09 2736 324 2736 324 2736 324 2736 142 2736 128.3 2725.24 118.27 2713.32 \
111.35 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2714.52 109.21 2707.18 108.14 2712.25 113.56 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2790.5 231.1 0 109 25 -additional_report_columns ",
		label=additional_report_columns,
		lp="2790.5,233",
		pos="e,2705.8,107.44 2751.3,366.77 2745,357.02 2736,340.09 2736,324 2736,324 2736,324 2736,142 2736,128.3 2725.2,118.27 2713.3,111.35"];
	epitope_lengths -> pvacseq	[_draw_="c 7 -#000000 B 10 2877.9 366.56 2873.46 356.62 2867 339.51 2867 324 2867 324 2867 324 2867 142 2867 113.69 2783.79 104.01 2728.98 \
100.71 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2729.42 98.28 2722.29 100.33 2729.14 103.17 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2900.5 231.1 0 67 15 -epitope_lengths ",
		label=epitope_lengths,
		lp="2900.5,233",
		pos="e,2720.8,100.25 2877.9,366.56 2873.5,356.62 2867,339.51 2867,324 2867,324 2867,324 2867,142 2867,113.69 2783.8,104.01 2729,100.71"];
	expression_tool -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 7 1515.59 366.56 1505.16 350.84 1480.82 316.81 1453 296 1378.43 240.23 1341.4 252.57 1247.55 243.34 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1247.92 240.91 1240.7 242.63 1247.41 245.79 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1495 298.6 0 64 15 -expression_tool ",
		label=expression_tool,
		lp="1495,300.5",
		pos="e,1239.2,242.47 1515.6,366.56 1505.2,350.84 1480.8,316.81 1453,296 1378.4,240.23 1341.4,252.57 1247.5,243.34"];
	expression_tool -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 10 1524.15 366.84 1527.71 356.88 1533 339.46 1533 324 1533 324 1533 324 1533 232 1533 204.83 1463.78 194.71 1405.4 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1405.88 188.57 1398.75 190.6 1405.59 193.46 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1565 276.1 0 64 15 -expression_tool ",
		label=expression_tool,
		lp="1565,278",
		pos="e,1397.2,190.51 1524.2,366.84 1527.7,356.88 1533,339.46 1533,324 1533,324 1533,324 1533,232 1533,204.83 1463.8,194.71 1405.4,191"];
	downstream_sequence_length -> pvacseq	[_draw_="c 7 -#000000 B 10 2994.37 366.62 2977.53 358.51 2957 344.44 2957 324 2957 324 2957 324 2957 142 2957 119.21 2807.7 106.66 2729.12 \
101.63 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2729.47 99.2 2722.33 101.21 2729.16 104.09 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3020 231.1 0 126 26 -downstream_sequence_length ",
		label=downstream_sequence_length,
		lp="3020,233",
		pos="e,2720.8,101.11 2994.4,366.62 2977.5,358.51 2957,344.44 2957,324 2957,324 2957,324 2957,142 2957,119.21 2807.7,106.66 2729.1,101.63"];
	variants_to_table	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 542.5 88.5 542.5 107.5 683.5 107.5 683.5 88.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 613 95.5 0 125 25 -SelectVariants (GATK 3.6) ",
		height=0.27778,
		label="SelectVariants (GATK 3.6)",
		pos="613,98",
		rects="542.5,88.5,683.5,107.5",
		width=1.9583];
	variants_to_table_genotype_fields -> variants_to_table	[_draw_="c 7 -#000000 B 10 297.16 366.54 319.84 359.51 339 346.82 339 324 339 324 339 324 339 142 339 122.07 453.6 109.93 534.58 103.85 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 534.48 106.31 541.28 103.35 534.12 101.42 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 372 231.1 0 66 15 -genotype_fields ",
		label=genotype_fields,
		lp="372,233",
		pos="e,542.79,103.24 297.16,366.54 319.84,359.51 339,346.82 339,324 339,324 339,324 339,142 339,122.07 453.6,109.93 534.58,103.85"];
	fasta_size -> pvacseq	[_draw_="c 7 -#000000 B 10 3127.16 366.5 3118.31 357.04 3106 340.85 3106 324 3106 324 3106 324 3106 142 3106 104.46 2839.49 99.42 2729.06 \
98.94 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3127 231.1 0 42 10 -fasta_size ",
		label=fasta_size,
		lp="3127,233",
		pos="e,2720.8,98.909 3127.2,366.5 3118.3,357.04 3106,340.85 3106,324 3106,324 3106,324 3106,142 3106,104.46 2839.5,99.416 2729.1,98.938"];
	trna_vaf -> pvacseq	[_draw_="c 7 -#000000 B 13 3195.47 366.5 3188.67 356.78 3179 340.12 3179 324 3179 324 3179 324 3179 142 3179 90.9 3117.63 122.93 3067 116 \
2945.89 99.41 2801.54 97.84 2728.82 98.3 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3196 231.1 0 34 8 -trna_vaf ",
		label=trna_vaf,
		lp="3196,233",
		pos="e,2720.7,98.365 3195.5,366.5 3188.7,356.78 3179,340.12 3179,324 3179,324 3179,324 3179,142 3179,90.899 3117.6,122.93 3067,116 2945.9,\
99.412 2801.5,97.843 2728.8,98.304"];
	reference_fasta -> variants_to_table	[_draw_="c 7 -#000000 B 10 613 366.7 613 356.6 613 339.05 613 324 613 324 613 324 613 142 613 133.31 613 123.63 613 115.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 615.45 115.76 613 108.76 610.55 115.76 ",
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		label=reference,
		lp="633,233",
		pos="e,613,107.24 613,366.7 613,356.6 613,339.05 613,324 613,324 613,324 613,142 613,133.31 613,123.63 613,115.65"];
	reference_fasta -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 7 632.67 366.53 652.35 358.48 683.68 346.75 712 341 766.02 330.02 828.07 325.83 875.81 324.35 ",
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		label=reference_fasta,
		lp="744.5,345.5",
		pos="e,884.25,324.11 632.67,366.53 652.35,358.48 683.68,346.75 712,341 766.02,330.02 828.07,325.83 875.81,324.35"];
	tdna_cov -> pvacseq	[_draw_="c 7 -#000000 B 13 3258.99 366.81 3252.47 357.1 3243 340.2 3243 324 3243 324 3243 324 3243 142 3243 87.86 3177.7 122.84 3124 116 \
3048.85 106.42 2827.01 101.51 2729.21 99.76 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2729.26 97.31 2722.22 99.64 2729.17 102.21 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3261.5 231.1 0 37 8 -tdna_cov ",
		label=tdna_cov,
		lp="3261.5,233",
		pos="e,2720.7,99.611 3259,366.81 3252.5,357.1 3243,340.2 3243,324 3243,324 3243,324 3243,142 3243,87.863 3177.7,122.84 3124,116 3048.9,\
106.42 2827,101.51 2729.2,99.761"];
	minimum_fold_change -> pvacseq	[_draw_="c 7 -#000000 B 13 3352.39 366.66 3341.22 357.56 3326 341.89 3326 324 3326 324 3326 324 3326 142 3326 78.28 3248.35 122.87 3185 116 \
3018.17 97.9 2818.56 97.39 2729.25 98.26 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2729.44 95.81 2722.47 98.34 2729.49 100.71 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3372 231.1 0 92 19 -minimum_fold_change ",
		label=minimum_fold_change,
		lp="3372,233",
		pos="e,2721,98.353 3352.4,366.66 3341.2,357.56 3326,341.89 3326,324 3326,324 3326,324 3326,142 3326,78.277 3248.4,122.87 3185,116 3018.2,\
97.901 2818.6,97.39 2729.2,98.264"];
	normal_sample_name -> pvacseq	[_draw_="c 7 -#000000 B 10 3484.69 366.8 3474.36 357.59 3460 341.61 3460 324 3460 324 3460 324 3460 142 3460 105.21 2897.94 99.89 2729.28 \
99.13 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2729.37 96.68 2722.36 99.1 2729.35 101.58 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3505 231.1 0 90 18 -normal_sample_name ",
		label=normal_sample_name,
		lp="3505,233",
		pos="e,2720.8,99.093 3484.7,366.8 3474.4,357.59 3460,341.61 3460,324 3460,324 3460,324 3460,142 3460,105.21 2897.9,99.894 2729.3,99.129"];
	rnaseq_bam -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 7 720.54 366.66 728.01 363.56 736.8 360.26 745 358 787.52 346.28 836.08 338.08 875.69 332.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 875.89 335.12 882.5 331.76 875.24 330.26 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 827.5 343.6 0 19 3 -bam ",
		label=bam,
		lp="827.5,345.5",
		pos="e,884,331.56 720.54,366.66 728.01,363.56 736.8,360.26 745,358 787.52,346.28 836.08,338.08 875.69,332.67"];
	expn_val -> pvacseq	[_draw_="c 7 -#000000 B 13 1756.1 366.59 1763.49 356.95 1774 340.37 1774 324 1774 324 1774 324 1774 142 1774 106.72 1814.27 122.21 1849 116 \
1926.15 102.19 2469.79 99.58 2634.69 99.1 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2634.67 101.55 2641.66 99.08 2634.66 96.65 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1792 231.1 0 36 8 -expn_val ",
		label=expn_val,
		lp="1792,233",
		pos="e,2643.2,99.079 1756.1,366.59 1763.5,356.95 1774,340.37 1774,324 1774,324 1774,324 1774,142 1774,106.72 1814.3,122.21 1849,116 1926.2,\
102.19 2469.8,99.58 2634.7,99.103"];
	normal_vaf -> pvacseq	[_draw_="c 7 -#000000 B 13 1826.81 366.54 1833.91 356.87 1844 340.24 1844 324 1844 324 1844 324 1844 142 1844 109.64 1880.25 122.23 1912 \
116 1982.59 102.16 2478.54 99.57 2634.9 99.1 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2634.89 101.55 2641.88 99.08 2634.88 96.65 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1867 231.1 0 46 10 -normal_vaf ",
		label=normal_vaf,
		lp="1867,233",
		pos="e,2643.4,99.078 1826.8,366.54 1833.9,356.87 1844,340.24 1844,324 1844,324 1844,324 1844,142 1844,109.64 1880.2,122.23 1912,116 1982.6,\
102.16 2478.5,99.575 2634.9,99.103"];
	normal_cov -> pvacseq	[_draw_="c 7 -#000000 B 13 1900.15 366.84 1903.71 356.88 1909 339.46 1909 324 1909 324 1909 324 1909 142 1909 94.36 1965.79 122.42 2013 116 \
2133.39 99.62 2503.63 98.66 2635.09 98.85 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2634.88 101.3 2641.89 98.87 2634.89 96.4 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1932.5 231.1 0 47 10 -normal_cov ",
		label=normal_cov,
		lp="1932.5,233",
		pos="e,2643.4,98.869 1900.2,366.84 1903.7,356.88 1909,339.46 1909,324 1909,324 1909,324 1909,142 1909,94.355 1965.8,122.42 2013,116 2133.4,\
99.624 2503.6,98.659 2635.1,98.854"];
	n_threads -> pvacseq	[_draw_="c 7 -#000000 B 13 1981.31 366.8 1991.64 357.59 2006 341.61 2006 324 2006 324 2006 324 2006 142 2006 113.75 2036.46 122.29 2064 116 \
2119.03 103.44 2500.86 100.04 2635.3 99.23 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2634.91 101.68 2641.9 99.19 2634.88 96.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2026.5 231.1 0 41 9 -n_threads ",
		label=n_threads,
		lp="2026.5,233",
		pos="e,2643.4,99.183 1981.3,366.8 1991.6,357.59 2006,341.61 2006,324 2006,324 2006,324 2006,142 2006,113.75 2036.5,122.29 2064,116 2119,\
103.44 2500.9,100.04 2635.3,99.231"];
	alleles -> pvacseq	[_draw_="c 7 -#000000 B 13 2040.23 366.79 2048.81 357.33 2061 340.91 2061 324 2061 324 2061 324 2061 142 2061 98.65 2112.15 122.52 2155 116 \
2246.73 102.04 2523.64 99.53 2634.94 99.09 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2634.79 101.54 2641.78 99.06 2634.77 96.64 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2075 231.1 0 28 7 -alleles ",
		label=alleles,
		lp="2075,233",
		pos="e,2643.3,99.058 2040.2,366.79 2048.8,357.33 2061,340.91 2061,324 2061,324 2061,324 2061,142 2061,98.654 2112.1,122.52 2155,116 2246.7,\
102.04 2523.6,99.528 2634.9,99.088"];
	variants_to_table_fields -> variants_to_table	[_draw_="c 7 -#000000 B 10 414.56 366.51 443.55 356.74 485 339.97 485 324 485 324 485 324 485 142 485 126.93 517.3 116.15 549.45 109.15 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 549.77 111.59 556.12 107.76 548.77 106.79 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 496.5 231.1 0 23 6 -fields ",
		label=fields,
		lp="496.5,233",
		pos="e,557.6,107.45 414.56,366.51 443.55,356.74 485,339.97 485,324 485,324 485,324 485,142 485,126.93 517.3,116.15 549.45,109.15"];
	trna_cov -> pvacseq	[_draw_="c 7 -#000000 B 13 2104.69 366.58 2123.03 355.55 2152 336.2 2152 324 2152 324 2152 324 2152 142 2152 95.22 2207.71 122.74 2254 116 \
2326.24 105.48 2539.39 101.1 2634.85 99.63 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2634.69 102.08 2641.65 99.52 2634.61 97.18 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2169.5 231.1 0 35 8 -trna_cov ",
		label=trna_cov,
		lp="2169.5,233",
		pos="e,2643.2,99.5 2104.7,366.58 2123,355.55 2152,336.2 2152,324 2152,324 2152,324 2152,142 2152,95.217 2207.7,122.74 2254,116 2326.2,\
105.48 2539.4,101.1 2634.8,99.625"];
	phased_proximal_variants_vcf -> pvacseq	[_draw_="c 7 -#000000 B 10 2214.1 366.59 2221.49 356.95 2232 340.37 2232 324 2232 324 2232 324 2232 142 2232 101.85 2519.52 98.41 2634.91 \
98.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2634.72 101.1 2641.73 98.67 2634.74 96.2 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2293 231.1 0 122 28 -phased_proximal_variants_vcf ",
		label=phased_proximal_variants_vcf,
		lp="2293,233",
		pos="e,2643.2,98.674 2214.1,366.59 2221.5,356.95 2232,340.37 2232,324 2232,324 2232,324 2232,142 2232,101.85 2519.5,98.413 2634.9,98.65"];
	transcript_expression_file -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 10 1650.38 366.64 1658.07 357.04 1669 340.5 1669 324 1669 324 1669 324 1669 232 1669 205.62 1507.23 195.19 1405.89 \
191.25 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1406.09 188.81 1399 190.99 1405.9 193.7 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1699.5 276.1 0 61 15 -expression_file ",
		label=expression_file,
		lp="1699.5,278",
		pos="e,1397.5,190.93 1650.4,366.64 1658.1,357.04 1669,340.5 1669,324 1669,324 1669,324 1669,232 1669,205.62 1507.2,195.19 1405.9,191.25"];
	detect_variants_vcf -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 4 826.26 366.58 852.07 357.98 892.26 344.58 920.66 335.11 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 921.4 337.45 927.26 332.91 919.85 332.8 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 906.5 343.6 0 13 3 -vcf ",
		label=vcf,
		lp="906.5,345.5",
		pos="e,928.7,332.43 826.26,366.58 852.07,357.98 892.26,344.58 920.66,335.11"];
	peptide_sequence_length -> pvacseq	[_draw_="c 7 -#000000 B 10 2371.53 366.5 2378.33 356.78 2388 340.12 2388 324 2388 324 2388 324 2388 142 2388 117.34 2551.97 105.53 2635 101.13 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2634.89 103.59 2641.75 100.78 2634.63 98.7 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2441 231.1 0 106 23 -peptide_sequence_length ",
		label=peptide_sequence_length,
		lp="2441,233",
		pos="e,2643.3,100.7 2371.5,366.5 2378.3,356.78 2388,340.12 2388,324 2388,324 2388,324 2388,142 2388,117.34 2552,105.53 2635,101.13"];
	variants_to_table -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 4 643.88 88.58 675.96 79.83 726.23 66.12 761.02 56.63 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 761.51 59.04 767.61 54.83 760.22 54.31 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 712.5 73.6 0 13 3 -tsv ",
		label=tsv,
		lp="712.5,75.5",
		pos="e,769.07,54.434 643.88,88.578 675.96,79.83 726.23,66.119 761.02,56.63"];
	pvacseq -> mhc_ii_all_epitopes	[_draw_="c 7 -#000000 B 4 2660.7 88.58 2639.22 80.09 2605.93 66.92 2582.04 57.48 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2583.15 55.29 2575.74 54.99 2581.35 59.84 ",
		pos="e,2574.3,54.434 2660.7,88.578 2639.2,80.089 2605.9,66.925 2582,57.482"];
	pvacseq -> mhc_ii_filtered_epitopes	[_draw_="c 7 -#000000 B 4 2682 88.58 2682 81.52 2682 71.24 2682 62.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2684.45 62.78 2682 55.78 2679.55 62.78 ",
		pos="e,2682,54.265 2682,88.578 2682,81.523 2682,71.24 2682,62.547"];
	pvacseq -> mhc_i_all_epitopes	[_draw_="c 7 -#000000 B 4 2702.97 88.58 2724.02 80.13 2756.61 67.04 2780.1 57.61 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2781.01 59.88 2786.59 55 2779.18 55.33 ",
		pos="e,2788,54.434 2703,88.578 2724,80.126 2756.6,67.039 2780.1,57.605"];
	pvacseq -> combined_filtered_epitopes	[_draw_="c 7 -#000000 B 7 2720.75 90.05 2757.63 83.36 2814.67 72.85 2864 63 2874.65 60.87 2886.08 58.5 2896.87 56.22 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2897.16 58.66 2903.5 54.81 2896.14 53.87 ",
		pos="e,2905,54.494 2720.8,90.047 2757.6,83.362 2814.7,72.848 2864,63 2874.7,60.874 2886.1,58.5 2896.9,56.217"];
	pvacseq -> combined_ranked_epitopes	[_draw_="c 7 -#000000 B 7 2720.96 94.5 2784.05 90.14 2912.37 79.94 3020 63 3031.6 61.17 3044.06 58.73 3055.57 56.26 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3055.97 58.68 3062.29 54.79 3054.92 53.89 ",
		pos="e,3063.8,54.463 2721,94.502 2784,90.138 2912.4,79.94 3020,63 3031.6,61.175 3044.1,58.726 3055.6,56.257"];
	pvacseq -> combined_all_epitopes	[_draw_="c 7 -#000000 B 7 2643.34 97.63 2547.96 98.57 2294.09 97.35 2086 63 2075.92 61.34 2065.14 58.97 2055.17 56.53 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2055.87 54.18 2048.48 54.85 2054.67 58.93 ",
		pos="e,2047,54.476 2643.3,97.631 2548,98.574 2294.1,97.352 2086,63 2075.9,61.336 2065.1,58.969 2055.2,56.529"];
	pvacseq -> mhc_ii_ranked_epitopes	[_draw_="c 7 -#000000 B 7 2643.13 96.42 2563.81 94.74 2377.83 88.2 2224 63 2213.54 61.29 2202.33 58.88 2191.99 56.41 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2192.76 54.08 2185.38 54.79 2191.59 58.84 ",
		pos="e,2183.9,54.433 2643.1,96.423 2563.8,94.738 2377.8,88.197 2224,63 2213.5,61.286 2202.3,58.878 2192,56.411"];
	pvacseq -> mhc_i_filtered_epitopes	[_draw_="c 7 -#000000 B 7 2643.36 94.51 2582.98 90.26 2462.76 80.34 2362 63 2351.85 61.25 2340.99 58.9 2330.9 56.51 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2331.48 54.13 2324.1 54.86 2330.32 58.89 ",
		pos="e,2322.6,54.498 2643.4,94.513 2583,90.264 2462.8,80.341 2362,63 2351.9,61.253 2341,58.903 2330.9,56.508"];
	pvacseq -> mhc_i_ranked_epitopes	[_draw_="c 7 -#000000 B 7 2643.25 90.53 2605.73 84.12 2547.3 73.72 2497 63 2487.63 61 2477.61 58.68 2468.16 56.41 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2468.88 54.06 2461.5 54.78 2467.72 58.82 ",
		pos="e,2460,54.427 2643.3,90.535 2605.7,84.12 2547.3,73.722 2497,63 2487.6,61.004 2477.6,58.681 2468.2,56.405"];
	add_vep_fields_to_table -> annotated_tsv;
	index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1168 133.5 1168 152.5 1230 152.5 1230 133.5 ",
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		height=0.27778,
		label="vcf index",
		pos="1199,143",
		rects="1168,133.5,1230,152.5",
		width=0.86111];
	index -> variants_to_table	[_draw_="c 7 -#000000 B 4 1168.32 139.75 1079.95 133.26 822.81 114.4 691.76 104.78 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 691.98 102.34 684.82 104.27 691.62 107.23 ",
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		label=vcf,
		lp="964.5,120.5",
		pos="e,683.31,104.16 1168.3,139.75 1079.9,133.26 822.81,114.4 691.76,104.78"];
	index -> pvacseq	[_draw_="c 7 -#000000 B 7 1229.65 139.23 1292.23 133.69 1439.26 121.36 1563 116 1978.31 98.03 2481.04 98.22 2634.97 98.77 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2634.8 101.22 2641.81 98.8 2634.82 96.32 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1581.5 118.6 0 37 9 -input_vcf ",
		label=input_vcf,
		lp="1581.5,120.5",
		pos="e,2643.3,98.802 1229.6,139.23 1292.2,133.69 1439.3,121.36 1563,116 1978.3,98.027 2481,98.222 2635,98.771"];
	index -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 4 1168.02 134.55 1097.39 117.55 924.28 75.9 843.21 56.4 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1058.5 96.1 0 13 3 -vcf ",
		label=vcf,
		lp="1058.5,98",
		pos="e,835.19,54.467 1168,134.55 1097.4,117.55 924.28,75.903 843.21,56.396"];
	tumor_rna_bam_readcount -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 919.78 313.61 908.81 309.35 901.08 303.47 908 296 908.48 295.48 955.28 291.87 1005.88 288.11 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1006.05 290.56 1012.85 287.59 1005.69 285.67 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 957 298.6 0 98 21 -snv_bam_readcount_tsv ",
		label=snv_bam_readcount_tsv,
		lp="957,300.5",
		pos="e,1014.4,287.48 919.78,313.61 908.81,309.35 901.08,303.47 908,296 908.48,295.48 955.28,291.87 1005.9,288.11"];
	tumor_rna_bam_readcount -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 10 983.13 313.56 989.83 311.16 996.8 308.3 1003 305 1008.89 301.87 1008.85 298.56 1015 296 1020.95 293.52 1027.19 \
291.4 1033.58 289.58 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1034.12 291.97 1040.26 287.82 1032.87 287.23 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1021.5 298.6 0 13 3 -vcf ",
		label=vcf,
		lp="1021.5,300.5",
		pos="e,1041.7,287.43 983.13,313.56 989.83,311.16 996.8,308.3 1003,305 1008.9,301.87 1008.8,298.56 1015,296 1020.9,293.52 1027.2,291.4 \
1033.6,289.58"];
	tumor_rna_bam_readcount -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 10 1005.89 313.52 1012.57 311.31 1019.13 308.52 1025 305 1029.59 302.25 1028.32 298.6 1033 296 1036.91 293.82 1041.04 \
291.91 1045.3 290.23 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1045.88 292.63 1051.65 287.97 1044.24 288.01 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1085 298.6 0 104 23 -indel_bam_readcount_tsv ",
		label=indel_bam_readcount_tsv,
		lp="1085,300.5",
		pos="e,1053.1,287.46 1005.9,313.52 1012.6,311.31 1019.1,308.52 1025,305 1029.6,302.25 1028.3,298.6 1033,296 1036.9,293.82 1041,291.91 \
1045.3,290.23"];
	add_gene_expression_data_to_vcf -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 7 1198.8 223.54 1217.39 218.44 1241.55 211.83 1263 206 1270.71 203.91 1278.95 201.68 1286.84 199.54 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1287.01 202.04 1293.13 197.85 1285.73 197.31 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1269.5 208.6 0 13 3 -vcf ",
		label=vcf,
		lp="1269.5,210.5",
		pos="e,1294.6,197.45 1198.8,223.54 1217.4,218.44 1241.5,211.83 1263,206 1270.7,203.91 1278.9,201.68 1286.8,199.54"];
	add_transcript_expression_data_to_vcf -> annotated_vcf	[_draw_="c 7 -#000000 B 10 1333.55 178.66 1348.03 163.27 1381.43 130.67 1417 116 1599.51 40.75 1665.94 108.65 1858 63 1864.29 61.5 1870.9 \
59.44 1877.12 57.26 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1877.57 59.71 1883.3 55 1875.88 55.11 ",
		pos="e,1884.7,54.479 1333.5,178.66 1348,163.27 1381.4,130.67 1417,116 1599.5,40.749 1665.9,108.65 1858,63 1864.3,61.505 1870.9,59.439 \
1877.1,57.262"];
	add_transcript_expression_data_to_vcf -> index	[_draw_="c 7 -#000000 B 4 1300.91 178.5 1281.17 171.82 1253.49 162.45 1231.96 155.16 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1232.89 152.89 1225.47 152.96 1231.32 157.53 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1279.5 163.6 0 13 3 -vcf ",
		label=vcf,
		lp="1279.5,165.5",
		pos="e,1224,152.48 1300.9,178.5 1281.2,171.82 1253.5,162.45 1232,155.16"];
	add_tumor_rna_bam_readcount_to_vcf -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 4 1138.13 268.71 1143.05 263 1149.71 255.26 1155.49 248.54 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1157.19 250.32 1159.9 243.41 1153.48 247.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1158.5 253.6 0 13 3 -vcf ",
		label=vcf,
		lp="1158.5,255.5",
		pos="e,1160.9,242.27 1138.1,268.71 1143,263 1149.7,255.26 1155.5,248.54"];
	default1	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 955 268.5 955 287.5 1005 287.5 1005 268.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 980 275.5 0 34 6 -\"gene\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"gene\"",
		pos="980,278",
		rects="955,268.5,1005,287.5",
		width=0.69444];
	default1 -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 7 1004.95 269.1 1006.32 268.72 1007.67 268.35 1009 268 1044.1 258.82 1084.03 250.29 1115.09 244.07 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1115.33 246.52 1121.71 242.75 1114.37 241.71 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1098.5 253.6 0 41 9 -data_type ",
		label=data_type,
		lp="1098.5,255.5",
		pos="e,1123.2,242.46 1005,269.1 1006.3,268.72 1007.7,268.35 1009,268 1044.1,258.82 1084,250.29 1115.1,244.07"];
	default2	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 1244 223.5 1244 242.5 1316 242.5 1316 223.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1280 230.5 0 56 12 -\"transcript\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"transcript\"",
		pos="1280,233",
		rects="1244,223.5,1316,242.5",
		width=1];
	default2 -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 7 1278.09 223.5 1277.35 218.01 1277.41 210.99 1281 206 1281.87 204.79 1282.84 203.66 1283.89 202.62 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1285.36 204.58 1289.45 198.38 1282.39 200.68 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1301.5 208.6 0 41 9 -data_type ",
		label=data_type,
		lp="1301.5,210.5",
		pos="e,1290.6,197.47 1278.1,223.5 1277.4,218.01 1277.4,210.99 1281,206 1281.9,204.79 1282.8,203.66 1283.9,202.62"];
	default3	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 1122.5 313.5 1122.5 332.5 1169.5 332.5 1169.5 313.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1146 320.5 0 31 5 -\"RNA\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"RNA\"",
		pos="1146,323",
		rects="1122.5,313.5,1169.5,332.5",
		width=0.65278];
	default3 -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 1143.67 313.74 1142.17 308.6 1140.11 301.87 1138 296 1137.87 295.64 1137.74 295.28 1137.6 294.91 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1139.98 294.26 1135.13 288.65 1135.42 296.06 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1160.5 298.6 0 41 9 -data_type ",
		label=data_type,
		lp="1160.5,300.5",
		pos="e,1134.6,287.24 1143.7,313.74 1142.2,308.6 1140.1,301.87 1138,296 1137.9,295.64 1137.7,295.28 1137.6,294.91"];
}