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			label=tdna_vaf,
			pos="837,376",
			rects="807.5,366.5,866.5,385.5",
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		allele_specific_binding_thresholds	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 443.5 366.5 443.5 385.5 626.5 385.5 626.5 366.5 ",
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			fillcolor="#94DDF4",
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			label=allele_specific_binding_thresholds,
			pos="535,376",
			rects="443.5,366.5,626.5,385.5",
			width=2.5417];
		transcript_expression_file	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 3795 366.5 3795 385.5 3937 385.5 3937 366.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3866 373.5 0 126 26 -transcript_expression_file ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=transcript_expression_file,
			pos="3866,376",
			rects="3795,366.5,3937,385.5",
			width=1.9722];
		minimum_fold_change	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 871 366.5 871 385.5 999 385.5 999 366.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 935 373.5 0 112 19 -minimum_fold_change ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=minimum_fold_change,
			pos="935,376",
			rects="871,366.5,999,385.5",
			width=1.7778];
		tdna_cov	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1003.5 366.5 1003.5 385.5 1064.5 385.5 1064.5 366.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1034 373.5 0 45 8 -tdna_cov ",
			fillcolor="#94DDF4",
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			label=tdna_cov,
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			rects="1003.5,366.5,1064.5,385.5",
			width=0.84722];
		epitope_lengths	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1068.5 366.5 1068.5 385.5 1163.5 385.5 1163.5 366.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1116 373.5 0 79 15 -epitope_lengths ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=epitope_lengths,
			pos="1116,376",
			rects="1068.5,366.5,1163.5,385.5",
			width=1.3194];
	}
	pvacseq	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1602 88.5 1602 107.5 1680 107.5 1680 88.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1641 95.5 0 62 11 -run pVACseq ",
		height=0.27778,
		label="run pVACseq",
		pos="1641,98",
		rects="1602,88.5,1680,107.5",
		width=1.0833];
	trna_vaf -> pvacseq	[_draw_="c 7 -#000000 B 13 717.47 366.73 723.39 356.95 732 339.98 732 324 732 324 732 324 732 142 732 114.56 761.27 122.18 788 116 866.45 \
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 749 231.1 0 34 8 -trna_vaf ",
		label=trna_vaf,
		lp="749,233",
		pos="e,1602.3,98.833 717.47,366.73 723.39,356.95 732,339.98 732,324 732,324 732,324 732,142 732,114.56 761.27,122.18 788,116 866.45,97.854 \
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	phased_proximal_variants_vcf -> pvacseq	[_draw_="c 7 -#000000 B 10 1275.56 366.66 1293.61 358.79 1315 345.03 1315 324 1315 324 1315 324 1315 142 1315 114.24 1503.14 103.84 1593.56 \
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1376 231.1 0 122 28 -phased_proximal_variants_vcf ",
		label=phased_proximal_variants_vcf,
		lp="1376,233",
		pos="e,1602,100.14 1275.6,366.66 1293.6,358.79 1315,345.03 1315,324 1315,324 1315,324 1315,142 1315,114.24 1503.1,103.84 1593.6,100.45"];
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		fillcolor="#F3CEA1",
		height=0.27778,
		label="bam_readcount workflow",
		pos="3299,323",
		rects="3229,313.5,3369,332.5",
		width=1.9444];
	readcount_minimum_mapping_quality -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 4 3287.31 366.58 3289.27 359.45 3292.13 349.02 3294.53 340.27 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3296.84 341.12 3296.33 333.72 3292.11 339.83 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3337.5 343.6 0 87 19 -min_mapping_quality ",
		label=min_mapping_quality,
		lp="3337.5,345.5",
		pos="e,3296.7,332.26 3287.3,366.58 3289.3,359.45 3292.1,349.02 3294.5,340.27"];
	sample_name -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 7 2852.78 366.52 2861.05 363.33 2870.84 359.99 2880 358 2912.31 350.98 3108.83 336.86 3220.89 329.21 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3062.5 343.6 0 31 6 -sample ",
		label=sample,
		lp="3062.5,345.5",
		pos="e,3229.1,328.65 2852.8,366.52 2861,363.33 2870.8,359.99 2880,358 2912.3,350.98 3108.8,336.86 3220.9,329.21"];
	sample_name -> pvacseq	[_draw_="c 7 -#000000 B 19 2837.27 366.58 2846.42 347.21 2865.41 298.83 2844 268 2825.88 241.89 2795.94 268.52 2777 243 2768.64 231.74 2775 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1688.51 96.85 1681.49 99.25 1688.48 101.75 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2806 231.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="2806,233",
		pos="e,1680,99.239 2837.3,366.58 2846.4,347.21 2865.4,298.83 2844,268 2825.9,241.89 2795.9,268.52 2777,243 2768.6,231.74 2775,225.53 \
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	add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2855.5 178.5 2855.5 197.5 2998.5 197.5 2998.5 178.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2927 185.5 0 127 26 -add expression info to vcf ",
		height=0.27778,
		label="add expression info to vcf",
		pos="2927,188",
		rects="2855.5,178.5,2998.5,197.5",
		width=1.9861];
	sample_name -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 13 2833.45 366.89 2834.47 352.29 2837.66 320.76 2847 296 2852.14 282.38 2853.51 278.09 2864 268 2880.49 252.14 2894.39 \
260.61 2909 243 2917.86 232.32 2922.42 217.1 2924.73 205.54 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2927.13 206.02 2925.88 198.71 2922.3 205.2 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2893 276.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="2893,278",
		pos="e,2926.1,197.21 2833.5,366.89 2834.5,352.29 2837.7,320.76 2847,296 2852.1,282.38 2853.5,278.09 2864,268 2880.5,252.14 2894.4,260.61 \
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	add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 3077 268.5 3077 287.5 3321 287.5 3321 268.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3199 275.5 0 228 46 -Add snv and indel bam-readcount files to a vcf ",
		fillcolor="#F3CEA1",
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		label="Add snv and indel bam-readcount files to a vcf",
		pos="3199,278",
		rects="3077,268.5,3321,287.5",
		width=3.3889];
	sample_name -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 2841.32 366.57 2858.73 349.57 2901.01 311.48 2945 296 2969.99 287.2 3034.57 289.49 3072.5 287.92 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3072.25 290.38 3079.11 287.57 3071.99 285.49 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2938 321.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="2938,323",
		pos="e,3080.6,287.49 2841.3,366.57 2858.7,349.57 2901,311.48 2945,296 2970,287.2 3034.6,289.49 3072.5,287.92"];
	add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2939.5 223.5 2939.5 242.5 3082.5 242.5 3082.5 223.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3011 230.5 0 127 26 -add expression info to vcf ",
		height=0.27778,
		label="add expression info to vcf",
		pos="3011,233",
		rects="2939.5,223.5,3082.5,242.5",
		width=1.9861];
	sample_name -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 10 2814.54 366.6 2780.44 350.51 2712.04 315.19 2724 296 2738.92 272.04 2754.05 276.39 2781 268 2808.4 259.47 2876.33 \
249.93 2931.3 243.13 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2931.51 245.57 2938.16 242.29 2930.91 240.71 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2753 298.6 0 58 11 -sample_name ",
		label=sample_name,
		lp="2753,300.5",
		pos="e,2939.7,242.1 2814.5,366.6 2780.4,350.51 2712,315.19 2724,296 2738.9,272.04 2754,276.39 2781,268 2808.4,259.47 2876.3,249.93 2931.3,\
243.13"];
	top_score_metric -> pvacseq	[_draw_="c 7 -#000000 B 10 1870.81 366.69 1865.18 356.88 1857 339.87 1857 324 1857 324 1857 324 1857 142 1857 107.79 1751.44 100.39 1687.91 \
99.04 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1688.17 96.6 1681.13 98.92 1688.09 101.5 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1892 231.1 0 70 16 -top_score_metric ",
		label=top_score_metric,
		lp="1892,233",
		pos="e,1679.6,98.896 1870.8,366.69 1865.2,356.88 1857,339.87 1857,324 1857,324 1857,324 1857,142 1857,107.79 1751.4,100.39 1687.9,99.043"];
	detect_variants_vcf -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 7 3434.34 366.55 3421.32 358.85 3400.96 347.68 3382 341 3374.87 338.49 3367.25 336.3 3359.64 334.4 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3360.25 332.03 3352.87 332.81 3359.12 336.8 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3408.5 343.6 0 13 3 -vcf ",
		label=vcf,
		lp="3408.5,345.5",
		pos="e,3351.4,332.46 3434.3,366.55 3421.3,358.85 3401,347.68 3382,341 3374.9,338.49 3367.3,336.3 3359.6,334.4"];
	downstream_sequence_length -> pvacseq	[_draw_="c 7 -#000000 B 10 2400.03 366.53 2388.02 357.55 2372 342.18 2372 324 2372 324 2372 324 2372 142 2372 107.62 1849.77 100.64 1688.11 \
99.3 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1688.32 96.85 1681.3 99.25 1688.28 101.75 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2435 231.1 0 126 26 -downstream_sequence_length ",
		label=downstream_sequence_length,
		lp="2435,233",
		pos="e,1679.8,99.234 2400,366.53 2388,357.55 2372,342.18 2372,324 2372,324 2372,324 2372,142 2372,107.62 1849.8,100.64 1688.1,99.3"];
	expn_val -> pvacseq	[_draw_="c 7 -#000000 B 13 2643.17 366.53 2639.03 356.57 2633 339.43 2633 324 2633 324 2633 324 2633 142 2633 62.49 2535.23 122.62 2456 116 \
2305.3 103.41 1838.24 99.99 1688.04 99.21 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1688.39 96.76 1681.38 99.17 1688.36 101.66 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2651 231.1 0 36 8 -expn_val ",
		label=expn_val,
		lp="2651,233",
		pos="e,1679.9,99.166 2643.2,366.53 2639,356.57 2633,339.43 2633,324 2633,324 2633,324 2633,142 2633,62.489 2535.2,122.62 2456,116 2305.3,\
103.41 1838.2,99.993 1688,99.208"];
	expression_tool -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 10 2927 366.7 2927 356.6 2927 339.05 2927 324 2927 324 2927 324 2927 232 2927 223.31 2927 213.63 2927 205.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2929.45 205.76 2927 198.76 2924.55 205.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2959 276.1 0 64 15 -expression_tool ",
		label=expression_tool,
		lp="2959,278",
		pos="e,2927,197.24 2927,366.7 2927,356.6 2927,339.05 2927,324 2927,324 2927,324 2927,232 2927,223.31 2927,213.63 2927,205.65"];
	expression_tool -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 10 2929.09 366.7 2933.86 348.45 2945.97 305.67 2957 296 2968.68 285.77 2979.37 298.28 2991 288 3001.75 278.51 3006.73 \
262.7 3009.03 250.63 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3011.44 251.09 3010.09 243.8 3006.6 250.34 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2989 298.6 0 64 15 -expression_tool ",
		label=expression_tool,
		lp="2989,300.5",
		pos="e,3010.3,242.3 2929.1,366.7 2933.9,348.45 2946,305.67 2957,296 2968.7,285.77 2979.4,298.28 2991,288 3001.7,278.51 3006.7,262.7 3009,\
250.63"];
	maximum_transcript_support_level -> pvacseq	[_draw_="c 7 -#000000 B 10 1439.53 366.5 1446.33 356.78 1456 340.12 1456 324 1456 324 1456 324 1456 142 1456 113.69 1539.21 104.01 1594.02 \
100.71 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1593.86 103.17 1600.71 100.33 1593.58 98.28 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1527 231.1 0 142 32 -maximum_transcript_support_level ",
		label=maximum_transcript_support_level,
		lp="1527,233",
		pos="e,1602.2,100.25 1439.5,366.5 1446.3,356.78 1456,340.12 1456,324 1456,324 1456,324 1456,142 1456,113.69 1539.2,104.01 1594,100.71"];
	exclude_nas -> pvacseq	[_draw_="c 7 -#000000 B 10 1583.97 366.53 1595.98 357.55 1612 342.18 1612 324 1612 324 1612 324 1612 142 1612 131.17 1618.41 121.02 1625.2 \
113.3 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1626.71 115.26 1629.81 108.52 1623.18 111.86 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1637.5 231.1 0 51 11 -exclude_nas ",
		label=exclude_nas,
		lp="1637.5,233",
		pos="e,1630.9,107.44 1584,366.53 1596,357.55 1612,342.18 1612,324 1612,324 1612,324 1612,142 1612,131.17 1618.4,121.02 1625.2,113.3"];
	prediction_algorithms -> pvacseq	[_draw_="c 7 -#000000 B 10 1674.74 366.7 1674.44 356.6 1674 339.05 1674 324 1674 324 1674 324 1674 142 1674 130.6 1666.61 120.36 1658.83 \
112.74 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1660.89 111.3 1654.04 108.45 1657.62 114.95 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1718.5 231.1 0 89 21 -prediction_algorithms ",
		label=prediction_algorithms,
		lp="1718.5,233",
		pos="e,1652.9,107.44 1674.7,366.7 1674.4,356.6 1674,339.05 1674,324 1674,324 1674,324 1674,142 1674,130.6 1666.6,120.36 1658.8,112.74"];
	readcount_minimum_base_quality -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 10 3652.96 366.5 3628.65 361.82 3598.14 355.8 3571 350 3553.6 346.28 3549.59 343.66 3532 341 3480.75 333.26 3422.6 \
329.01 3377.22 326.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3377.52 324.26 3370.41 326.36 3377.28 329.16 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3606.5 343.6 0 71 16 -min_base_quality ",
		label=min_base_quality,
		lp="3606.5,345.5",
		pos="e,3368.9,326.29 3653,366.5 3628.7,361.82 3598.1,355.8 3571,350 3553.6,346.28 3549.6,343.66 3532,341 3480.7,333.26 3422.6,329.01 \
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	netmhc_stab -> pvacseq	[_draw_="c 7 -#000000 B 10 1779.42 366.73 1777.65 356.67 1775 339.16 1775 324 1775 324 1775 324 1775 142 1775 123.18 1726.48 111.44 1687.83 \
105.07 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1688.55 102.71 1681.25 104.03 1687.78 107.55 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1801.5 231.1 0 53 11 -netmhc_stab ",
		label=netmhc_stab,
		lp="1801.5,233",
		pos="e,1679.8,103.8 1779.4,366.73 1777.6,356.67 1775,339.16 1775,324 1775,324 1775,324 1775,142 1775,123.18 1726.5,111.44 1687.8,105.07"];
	gene_expression_file -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 4 3036.39 366.6 3032.03 343.82 3019.91 280.55 3014.14 250.39 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3016.57 250.08 3012.85 243.66 3011.76 251 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3054.5 298.6 0 61 15 -expression_file ",
		label=expression_file,
		lp="3054.5,300.5",
		pos="e,3012.6,242.18 3036.4,366.6 3032,343.82 3019.9,280.55 3014.1,250.39"];
	reference_fasta -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 7 3532.3 366.54 3523.82 363.57 3514.04 360.39 3505 358 3463.28 346.98 3415.82 338.86 3376.98 333.32 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3377.6 330.93 3370.33 332.39 3376.92 335.79 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3498.5 343.6 0 65 15 -reference_fasta ",
		label=reference_fasta,
		lp="3498.5,345.5",
		pos="e,3368.8,332.18 3532.3,366.54 3523.8,363.57 3514,360.39 3505,358 3463.3,346.98 3415.8,338.86 3377,333.32"];
	variants_to_table	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3529.5 88.5 3529.5 107.5 3670.5 107.5 3670.5 88.5 ",
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		height=0.27778,
		label="SelectVariants (GATK 3.6)",
		pos="3600,98",
		rects="3529.5,88.5,3670.5,107.5",
		width=1.9583];
	reference_fasta -> variants_to_table	[_draw_="c 7 -#000000 B 16 3554.8 366.65 3555.04 359.23 3556.45 348.44 3562 341 3591.85 301 3631.85 328.51 3661 288 3681.14 260.01 3674 245.99 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3649.28 108.33 3641.87 107.98 3647.44 112.87 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3695 231.1 0 40 9 -reference ",
		label=reference,
		lp="3695,233",
		pos="e,3640.5,107.42 3554.8,366.65 3555,359.23 3556.4,348.44 3562,341 3591.9,301 3631.8,328.51 3661,288 3681.1,260.01 3674,245.99 3674,\
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	net_chop_method -> pvacseq	[_draw_="c 7 -#000000 B 10 1976.47 366.5 1969.67 356.78 1960 340.12 1960 324 1960 324 1960 324 1960 142 1960 114.9 1776.82 104.18 1688.08 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1688.4 98.14 1681.31 100.31 1688.21 103.03 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1996.5 231.1 0 73 15 -net_chop_method ",
		label=net_chop_method,
		lp="1996.5,233",
		pos="e,1679.8,100.25 1976.5,366.5 1969.7,356.78 1960,340.12 1960,324 1960,324 1960,324 1960,142 1960,114.9 1776.8,104.18 1688.1,100.58"];
	normal_vaf -> pvacseq	[_draw_="c 7 -#000000 B 10 2070.63 366.59 2065.89 356.68 2059 339.59 2059 324 2059 324 2059 324 2059 142 2059 105.07 1797.52 99.66 1688.18 \
99.01 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1688.47 96.56 1681.46 98.98 1688.45 101.46 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2082 231.1 0 46 10 -normal_vaf ",
		label=normal_vaf,
		lp="2082,233",
		pos="e,1679.9,98.969 2070.6,366.59 2065.9,356.68 2059,339.59 2059,324 2059,324 2059,324 2059,142 2059,105.07 1797.5,99.659 1688.2,99.01"];
	fasta_size -> pvacseq	[_draw_="c 7 -#000000 B 13 2142.81 366.69 2137.18 356.88 2129 339.87 2129 324 2129 324 2129 324 2129 142 2129 91.33 2068.19 122.95 2018 116 \
1900.13 99.68 1759.76 97.96 1688.14 98.34 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2150 231.1 0 42 10 -fasta_size ",
		label=fasta_size,
		lp="2150,233",
		pos="e,1679.7,98.394 2142.8,366.69 2137.2,356.88 2129,339.87 2129,324 2129,324 2129,324 2129,142 2129,91.331 2068.2,122.95 2018,116 1900.1,\
99.681 1759.8,97.961 1688.1,98.339"];
	peptide_sequence_length -> pvacseq	[_draw_="c 7 -#000000 B 13 2244.09 366.72 2232.62 357.68 2217 342.06 2217 324 2217 324 2217 324 2217 142 2217 77.84 2138.77 123.05 2075 116 \
1934.89 100.51 1767.98 98.58 1688.12 98.66 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1688.26 96.21 1681.26 98.68 1688.27 101.11 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2270 231.1 0 106 23 -peptide_sequence_length ",
		label=peptide_sequence_length,
		lp="2270,233",
		pos="e,1679.7,98.679 2244.1,366.72 2232.6,357.68 2217,342.06 2217,324 2217,324 2217,324 2217,142 2217,77.84 2138.8,123.05 2075,116 1934.9,\
100.51 1768,98.577 1688.1,98.662"];
	add_vep_fields_to_table	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3018.5 35.5 3018.5 54.5 3175.5 54.5 3175.5 35.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3097 42.5 0 141 28 -add VEP annotation to report ",
		height=0.27778,
		label="add VEP annotation to report",
		pos="3097,45",
		rects="3018.5,35.5,3175.5,54.5",
		width=2.1806];
	vep_to_table_fields -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 10 4293.29 366.61 4245.54 352.59 4155 325.79 4155 324 4155 324 4155 324 4155 97 4155 48.5 3436.41 45.3 3183.66 45.68 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 4176 208.6 0 42 10 -vep_fields ",
		label=vep_fields,
		lp="4176,210.5",
		pos="e,3175.2,45.692 4293.3,366.61 4245.5,352.59 4155,325.79 4155,324 4155,324 4155,324 4155,97 4155,48.503 3436.4,45.303 3183.7,45.677"];
	net_chop_threshold -> pvacseq	[_draw_="c 7 -#000000 B 10 2548.9 366.59 2541.51 356.95 2531 340.37 2531 324 2531 324 2531 324 2531 142 2531 99.41 1872.19 98.28 1688.21 \
98.79 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1688.32 96.34 1681.33 98.81 1688.34 101.24 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2571.5 231.1 0 81 18 -net_chop_threshold ",
		label=net_chop_threshold,
		lp="2571.5,233",
		pos="e,1679.8,98.815 2548.9,366.59 2541.5,356.95 2531,340.37 2531,324 2531,324 2531,324 2531,142 2531,99.41 1872.2,98.276 1688.2,98.79"];
	variants_to_table_fields -> variants_to_table	[_draw_="c 7 -#000000 B 13 4162.24 366.53 4150.76 363.72 4137.84 360.64 4126 358 4089.04 349.75 3959 361.87 3959 324 3959 324 3959 324 3959 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3679.08 98.29 3672.01 100.52 3678.93 103.19 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3970.5 231.1 0 23 6 -fields ",
		label=fields,
		lp="3970.5,233",
		pos="e,3670.5,100.48 4162.2,366.53 4150.8,363.72 4137.8,360.64 4126,358 4089,349.75 3959,361.87 3959,324 3959,324 3959,324 3959,142 3959,\
114 3784.6,104.14 3678.9,100.74"];
	rnaseq_bam -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 7 3159.98 366.66 3167.19 363.77 3175.41 360.61 3183 358 3208.1 349.38 3236.71 340.98 3259.24 334.68 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3259.7 337.1 3265.79 332.87 3258.39 332.38 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3245.5 343.6 0 19 3 -bam ",
		label=bam,
		lp="3245.5,345.5",
		pos="e,3267.2,332.46 3160,366.66 3167.2,363.77 3175.4,360.61 3183,358 3208.1,349.38 3236.7,340.98 3259.2,334.68"];
	additional_report_columns -> pvacseq	[_draw_="c 7 -#000000 B 13 91.36 366.78 94.03 356.76 98 339.28 98 324 98 324 98 324 98 142 98 73.03 182.31 122.22 251 116 386.78 103.71 1365.87 \
99.87 1593.71 99.14 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1593.62 101.59 1600.61 99.12 1593.6 96.69 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 152.5 231.1 0 109 25 -additional_report_columns ",
		label=additional_report_columns,
		lp="152.5,233",
		pos="e,1602.1,99.113 91.365,366.78 94.031,356.76 98,339.28 98,324 98,324 98,324 98,142 98,73.025 182.31,122.22 251,116 386.78,103.71 \
1365.9,99.871 1593.7,99.139"];
	n_threads -> pvacseq	[_draw_="c 7 -#000000 B 13 213.73 366.5 226.86 357.71 244 342.66 244 324 244 324 244 324 244 142 244 115.36 272.07 122.09 298 116 362.26 \
100.91 1363.7 99.21 1594.02 99.02 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1593.69 101.47 1600.69 99.02 1593.69 96.57 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 264.5 231.1 0 41 9 -n_threads ",
		label=n_threads,
		lp="264.5,233",
		pos="e,1602.2,99.018 213.73,366.5 226.86,357.71 244,342.66 244,324 244,324 244,324 244,142 244,115.36 272.07,122.09 298,116 362.26,100.91 \
1363.7,99.214 1594,99.024"];
	normal_cov -> pvacseq	[_draw_="c 7 -#000000 B 13 279.81 366.54 286.91 356.87 297 340.24 297 324 297 324 297 324 297 142 297 61.17 396.42 122.38 477 116 699.48 \
98.38 1404.43 98.51 1593.79 98.88 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1593.63 101.33 1600.64 98.89 1593.64 96.43 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 320.5 231.1 0 47 10 -normal_cov ",
		label=normal_cov,
		lp="320.5,233",
		pos="e,1602.2,98.894 279.81,366.54 286.91,356.87 297,340.24 297,324 297,324 297,324 297,142 297,61.17 396.42,122.38 477,116 699.48,98.381 \
1404.4,98.51 1593.8,98.877"];
	normal_sample_name -> pvacseq	[_draw_="c 7 -#000000 B 13 422.53 366.58 444.85 359.54 467 346.81 467 324 467 324 467 324 467 142 467 95.42 628.54 119.3 675 116 856.72 103.08 \
1425.57 99.85 1593.73 99.16 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1593.63 101.61 1600.62 99.14 1593.61 96.71 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 512 231.1 0 90 18 -normal_sample_name ",
		label=normal_sample_name,
		lp="512,233",
		pos="e,1602.1,99.129 422.53,366.58 444.85,359.54 467,346.81 467,324 467,324 467,324 467,142 467,95.418 628.54,119.3 675,116 856.72,103.08 \
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	alleles -> pvacseq	[_draw_="c 7 -#000000 B 13 659.1 366.56 663.54 356.62 670 339.51 670 324 670 324 670 324 670 142 670 109.64 706.24 122.17 738 116 822.05 \
99.66 1420.11 98.83 1593.81 98.94 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1593.73 101.39 1600.73 98.94 1593.73 96.49 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 684 231.1 0 28 7 -alleles ",
		label=alleles,
		lp="684,233",
		pos="e,1602.2,98.941 659.1,366.56 663.54,356.62 670,339.51 670,324 670,324 670,324 670,142 670,109.64 706.24,122.17 738,116 822.05,99.659 \
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	variants_to_table_genotype_fields -> variants_to_table	[_draw_="c 7 -#000000 B 13 3986.01 366.56 3900.01 350.68 3720.9 315.48 3664 288 3624.08 268.72 3600 255.83 3600 211.5 3600 211.5 3600 211.5 \
3600 142 3600 133.31 3600 123.63 3600 115.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3602.45 115.76 3600 108.76 3597.55 115.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3638 231.1 0 66 15 -genotype_fields ",
		label=genotype_fields,
		lp="3638,233",
		pos="e,3600,107.24 3986,366.56 3900,350.68 3720.9,315.48 3664,288 3624.1,268.72 3600,255.83 3600,211.5 3600,211.5 3600,211.5 3600,142 \
3600,133.31 3600,123.63 3600,115.65"];
	trna_cov -> pvacseq	[_draw_="c 7 -#000000 B 13 776.63 366.79 779.59 356.8 784 339.34 784 324 784 324 784 324 784 142 784 103.77 828.28 122.26 866 116 937.49 \
104.13 1437.33 100.2 1594.09 99.25 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1593.67 101.7 1600.66 99.21 1593.64 96.8 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 801.5 231.1 0 35 8 -trna_cov ",
		label=trna_cov,
		lp="801.5,233",
		pos="e,1602.2,99.204 776.63,366.79 779.59,356.8 784,339.34 784,324 784,324 784,324 784,142 784,103.77 828.28,122.26 866,116 937.49,104.13 \
1437.3,100.2 1594.1,99.252"];
	tdna_vaf -> pvacseq	[_draw_="c 7 -#000000 B 13 844.95 366.74 853.23 357.23 865 340.77 865 324 865 324 865 324 865 142 865 82.64 937.01 122.58 996 116 1111.76 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1593.63 101.66 1600.62 99.17 1593.6 96.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 883 231.1 0 36 8 -tdna_vaf ",
		label=tdna_vaf,
		lp="883,233",
		pos="e,1602.1,99.16 844.95,366.74 853.23,357.23 865,340.77 865,324 865,324 865,324 865,142 865,82.642 937.01,122.58 996,116 1111.8,103.08 \
1465.1,99.933 1593.6,99.206"];
	transcript_expression_file -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 16 3834.1 366.55 3820.86 363.36 3805.28 360.02 3791 358 3760.58 353.7 3682.21 359.51 3653 350 3645.97 347.71 3645.82 \
343.87 3639 341 3506.19 284.98 3463.92 298.33 3323 268 3200.34 241.6 3055.63 213.5 2979.66 198.98 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2980.45 196.64 2973.12 197.73 2979.53 201.45 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3466.5 276.1 0 61 15 -expression_file ",
		label=expression_file,
		lp="3466.5,278",
		pos="e,2971.6,197.45 3834.1,366.55 3820.9,363.36 3805.3,360.02 3791,358 3760.6,353.7 3682.2,359.51 3653,350 3646,347.71 3645.8,343.87 \
3639,341 3506.2,284.98 3463.9,298.33 3323,268 3200.3,241.6 3055.6,213.5 2979.7,198.98"];
	minimum_fold_change -> pvacseq	[_draw_="c 7 -#000000 B 10 935.53 366.7 936.12 356.61 937 339.06 937 324 937 324 937 324 937 142 937 108.99 1436.53 101.08 1594.03 99.41 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1593.66 101.86 1600.63 99.34 1593.61 96.96 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 983 231.1 0 92 19 -minimum_fold_change ",
		label=minimum_fold_change,
		lp="983,233",
		pos="e,1602.1,99.324 935.53,366.7 936.12,356.61 937,339.06 937,324 937,324 937,324 937,142 937,108.99 1436.5,101.08 1594,99.408"];
	tdna_cov -> pvacseq	[_draw_="c 7 -#000000 B 13 1051.06 366.61 1077.91 353.26 1127 328.28 1127 324 1127 324 1127 324 1127 142 1127 91.33 1187.8 122.88 1238 116 \
1305.38 106.77 1502.51 101.76 1593.71 99.88 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1593.73 102.33 1600.68 99.74 1593.63 97.43 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1145.5 231.1 0 37 8 -tdna_cov ",
		label=tdna_cov,
		lp="1145.5,233",
		pos="e,1602.2,99.707 1051.1,366.61 1077.9,353.26 1127,328.28 1127,324 1127,324 1127,324 1127,142 1127,91.331 1187.8,122.88 1238,116 1305.4,\
106.77 1502.5,101.76 1593.7,99.88"];
	epitope_lengths -> pvacseq	[_draw_="c 7 -#000000 B 10 1137.42 366.52 1167.07 354.46 1217 332.84 1217 324 1217 324 1217 324 1217 142 1217 104.46 1483.51 99.42 1593.94 \
98.94 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1593.74 101.39 1600.74 98.91 1593.73 96.49 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1250.5 231.1 0 67 15 -epitope_lengths ",
		label=epitope_lengths,
		lp="1250.5,233",
		pos="e,1602.2,98.909 1137.4,366.52 1167.1,354.46 1217,332.84 1217,324 1217,324 1217,324 1217,142 1217,104.46 1483.5,99.416 1593.9,98.938"];
	add_vep_fields_to_table -> annotated_tsv;
	tumor_rna_bam_readcount -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 3298.6 313.53 3297.87 307.76 3295.94 300.4 3291 296 3288.23 293.53 3283.51 291.4 3277.64 289.57 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3278.49 287.26 3271.1 287.8 3277.21 291.99 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3302.5 298.6 0 13 3 -vcf ",
		label=vcf,
		lp="3302.5,300.5",
		pos="e,3269.6,287.41 3298.6,313.53 3297.9,307.76 3295.9,300.4 3291,296 3288.2,293.53 3283.5,291.4 3277.6,289.57"];
	tumor_rna_bam_readcount -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 3306.85 313.55 3310.97 308.08 3314.34 301.06 3310 296 3308.14 293.84 3305.26 291.95 3301.61 290.29 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3302.56 288.03 3295.14 287.92 3300.87 292.63 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3361 298.6 0 98 21 -snv_bam_readcount_tsv ",
		label=snv_bam_readcount_tsv,
		lp="3361,300.5",
		pos="e,3293.7,287.4 3306.8,313.55 3311,308.08 3314.3,301.06 3310,296 3308.1,293.84 3305.3,291.95 3301.6,290.29"];
	tumor_rna_bam_readcount -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 3229.03 318.84 3209.66 316.41 3192.21 312.22 3186 305 3183.27 301.83 3183.67 297.99 3185.46 294.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3187.39 295.77 3189.3 288.6 3183.34 293.01 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3238 298.6 0 104 23 -indel_bam_readcount_tsv ",
		label=indel_bam_readcount_tsv,
		lp="3238,300.5",
		pos="e,3190.2,287.35 3229,318.84 3209.7,316.41 3192.2,312.22 3186,305 3183.3,301.83 3183.7,297.99 3185.5,294.24"];
	pvacseq -> combined_ranked_epitopes	[_draw_="c 7 -#000000 B 4 1666.6 88.58 1692.85 79.94 1733.8 66.47 1762.59 56.99 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1763.05 59.42 1768.93 54.91 1761.51 54.77 ",
		pos="e,1770.4,54.434 1666.6,88.578 1692.8,79.941 1733.8,66.465 1762.6,56.992"];
	pvacseq -> mhc_ii_all_epitopes	[_draw_="c 7 -#000000 B 7 1679.69 92.86 1725.8 87.57 1805.01 77.36 1872 63 1880.18 61.25 1888.88 59 1897.05 56.73 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1897.49 59.15 1903.55 54.87 1896.15 54.44 ",
		pos="e,1905,54.454 1679.7,92.863 1725.8,87.575 1805,77.356 1872,63 1880.2,61.247 1888.9,59.005 1897.1,56.727"];
	pvacseq -> mhc_i_all_epitopes	[_draw_="c 7 -#000000 B 7 1679.95 95.52 1744.64 92.55 1878.1 84.21 1989 63 1997.32 61.41 2006.17 59.17 2014.41 56.83 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2014.92 59.23 2020.95 54.91 2013.54 54.53 ",
		pos="e,2022.4,54.484 1680,95.521 1744.6,92.547 1878.1,84.209 1989,63 1997.3,61.408 2006.2,59.165 2014.4,56.83"];
	pvacseq -> mhc_i_filtered_epitopes	[_draw_="c 7 -#000000 B 7 1679.7 96.53 1759.55 95.05 1948.16 88.86 2104 63 2114.32 61.29 2125.37 58.88 2135.57 56.41 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2135.86 58.86 2142.07 54.8 2134.68 54.11 ",
		pos="e,2143.5,54.435 1679.7,96.534 1759.5,95.053 1948.2,88.862 2104,63 2114.3,61.288 2125.4,58.879 2135.6,56.413"];
	pvacseq -> mhc_ii_ranked_epitopes	[_draw_="c 7 -#000000 B 7 1679.88 97.42 1775.82 97.9 2031.22 95.72 2241 63 2251.57 61.35 2262.9 58.94 2273.32 56.45 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2273.78 58.86 2279.99 54.81 2272.61 54.1 ",
		pos="e,2281.5,54.449 1679.9,97.425 1775.8,97.904 2031.2,95.719 2241,63 2251.6,61.351 2262.9,58.94 2273.3,56.45"];
	pvacseq -> mhc_i_ranked_epitopes	[_draw_="c 7 -#000000 B 7 1602.18 95.03 1537.35 91.33 1403.11 81.96 1291 63 1280.88 61.29 1270.06 58.93 1260.03 56.51 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1260.67 54.15 1253.29 54.84 1259.49 58.9 ",
		pos="e,1251.8,54.481 1602.2,95.026 1537.4,91.329 1403.1,81.961 1291,63 1280.9,61.289 1270.1,58.929 1260,56.512"];
	pvacseq -> mhc_ii_filtered_epitopes	[_draw_="c 7 -#000000 B 7 1602.15 91.56 1559.88 85.44 1490.41 74.81 1431 63 1421.16 61.04 1410.62 58.7 1400.72 56.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1401.44 54.04 1394.06 54.8 1400.31 58.8 ",
		pos="e,1392.6,54.455 1602.1,91.557 1559.9,85.44 1490.4,74.807 1431,63 1421.2,61.044 1410.6,58.699 1400.7,56.384"];
	pvacseq -> combined_all_epitopes	[_draw_="c 7 -#000000 B 4 1617.06 88.58 1592.71 80.01 1554.84 66.7 1527.95 57.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1528.82 54.95 1521.41 54.94 1527.2 59.57 ",
		pos="e,1520,54.434 1617.1,88.578 1592.7,80.015 1554.8,66.695 1527.9,57.236"];
	pvacseq -> combined_filtered_epitopes	[_draw_="c 7 -#000000 B 4 1641 88.58 1641 81.52 1641 71.24 1641 62.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1643.45 62.78 1641 55.78 1638.55 62.78 ",
		pos="e,1641,54.265 1641,88.578 1641,81.523 1641,71.24 1641,62.547"];
	variants_to_table -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 4 3529.53 89.85 3438.89 80.67 3281.52 64.71 3183.66 54.79 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3183.98 52.36 3176.76 54.09 3183.48 57.23 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3428.5 73.6 0 13 3 -tsv ",
		label=tsv,
		lp="3428.5,75.5",
		pos="e,3175.3,53.935 3529.5,89.855 3438.9,80.665 3281.5,64.709 3183.7,54.787"];
	add_transcript_expression_data_to_vcf -> annotated_vcf	[_draw_="c 7 -#000000 B 10 2931.25 178.74 2940.31 159.84 2958.84 113.16 2935 88 2899.64 50.68 2523.38 73.24 2473 63 2466.42 61.66 2459.53 \
59.58 2453.11 57.33 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2454.13 55.09 2446.72 54.95 2452.43 59.69 ",
		pos="e,2445.3,54.426 2931.2,178.74 2940.3,159.84 2958.8,113.16 2935,88 2899.6,50.68 2523.4,73.242 2473,63 2466.4,61.663 2459.5,59.582 \
2453.1,57.329"];
	index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2873 133.5 2873 152.5 2935 152.5 2935 133.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2904 140.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="2904,143",
		rects="2873,133.5,2935,152.5",
		width=0.86111];
	add_transcript_expression_data_to_vcf -> index	[_draw_="c 7 -#000000 B 4 2922.57 178.71 2919.64 173.24 2915.71 165.9 2912.23 159.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2914.6 158.62 2909.13 153.6 2910.28 160.93 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2923.5 163.6 0 13 3 -vcf ",
		label=vcf,
		lp="2923.5,165.5",
		pos="e,2908.4,152.27 2922.6,178.71 2919.6,173.24 2915.7,165.9 2912.2,159.38"];
	index -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 4 2920.79 133.65 2955.01 116.63 3032.94 77.87 3072.69 58.09 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3073.58 60.39 3078.76 55.07 3071.4 56 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3016.5 96.1 0 13 3 -vcf ",
		label=vcf,
		lp="3016.5,98",
		pos="e,3080.1,54.4 2920.8,133.65 2955,116.63 3032.9,77.866 3072.7,58.09"];
	index -> pvacseq	[_draw_="c 7 -#000000 B 7 2873.18 133.88 2848.04 127.67 2811.5 119.59 2779 116 2669.67 103.92 1889.52 99.99 1688.27 99.18 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1688.48 96.73 1681.47 99.15 1688.46 101.63 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2848.5 118.6 0 37 9 -input_vcf ",
		label=input_vcf,
		lp="2848.5,120.5",
		pos="e,1680,99.142 2873.2,133.88 2848,127.67 2811.5,119.59 2779,116 2669.7,103.92 1889.5,99.994 1688.3,99.175"];
	index -> variants_to_table	[_draw_="c 7 -#000000 B 4 2934.8 140.1 3037.18 133.77 3368.2 113.32 3521.16 103.87 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3521.3 106.32 3528.13 103.44 3521 101.43 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3320.5 118.6 0 13 3 -vcf ",
		label=vcf,
		lp="3320.5,120.5",
		pos="e,3529.6,103.35 2934.8,140.1 3037.2,133.77 3368.2,113.32 3521.2,103.87"];
	add_tumor_rna_bam_readcount_to_vcf -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 4 3161.86 268.5 3131.47 261.56 3088.39 251.7 3056.04 244.3 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3056.91 241.99 3049.54 242.82 3055.82 246.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3127.5 253.6 0 13 3 -vcf ",
		label=vcf,
		lp="3127.5,255.5",
		pos="e,3048.1,242.48 3161.9,268.5 3131.5,261.56 3088.4,251.7 3056,244.3"];
	add_gene_expression_data_to_vcf -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 4 2994.4 223.5 2981.98 217.14 2964.8 208.35 2950.9 201.23 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2952.26 199.18 2944.91 198.17 2950.02 203.54 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2982.5 208.6 0 13 3 -vcf ",
		label=vcf,
		lp="2982.5,210.5",
		pos="e,2943.6,197.48 2994.4,223.5 2982,217.14 2964.8,208.35 2950.9,201.23"];
	default1	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 2837 223.5 2837 242.5 2909 242.5 2909 223.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2873 230.5 0 56 12 -\"transcript\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"transcript\"",
		pos="2873,233",
		rects="2837,223.5,2909,242.5",
		width=1];
	default1 -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 7 2869.81 223.96 2868.18 218.39 2867.22 211.09 2871 206 2871.89 204.79 2872.87 203.67 2873.92 202.62 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2875.39 204.59 2879.42 198.36 2872.38 200.71 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2891.5 208.6 0 41 9 -data_type ",
		label=data_type,
		lp="2891.5,210.5",
		pos="e,2880.6,197.43 2869.8,223.96 2868.2,218.39 2867.2,211.09 2871,206 2871.9,204.79 2872.9,203.67 2873.9,202.62"];
	default2	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 3112.5 313.5 3112.5 332.5 3159.5 332.5 3159.5 313.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3136 320.5 0 31 5 -\"RNA\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"RNA\"",
		pos="3136,323",
		rects="3112.5,313.5,3159.5,332.5",
		width=0.65278];
	default2 -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 3135.12 313.78 3134.98 308.13 3135.78 300.8 3140 296 3141.26 294.57 3142.63 293.26 3144.09 292.05 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3145.29 294.19 3149.75 288.26 3142.57 290.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3160.5 298.6 0 41 9 -data_type ",
		label=data_type,
		lp="3160.5,300.5",
		pos="e,3151,287.42 3135.1,313.78 3135,308.13 3135.8,300.8 3140,296 3141.3,294.57 3142.6,293.26 3144.1,292.05"];
	default3	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 3023 268.5 3023 287.5 3073 287.5 3073 268.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3048 275.5 0 34 6 -\"gene\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"gene\"",
		pos="3048,278",
		rects="3023,268.5,3073,287.5",
		width=0.69444];
	default3 -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 4 3040.87 268.71 3035.95 263 3029.29 255.26 3023.51 248.54 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3025.52 247.12 3019.1 243.41 3021.81 250.32 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3052.5 253.6 0 41 9 -data_type ",
		label=data_type,
		lp="3052.5,255.5",
		pos="e,3018.1,242.27 3040.9,268.71 3036,263 3029.3,255.26 3023.5,248.54"];
}