digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 323 408 323 408 0 ",
		bb="0,0,408,323",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
	];
	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 260 8 315 400 315 400 260 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 303 0 84 15 -Workflow Inputs ",
			bb="8,260,400,315",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,305.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		docm_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 84 268.5 84 287.5 148 287.5 148 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 116 275.5 0 48 8 -docm_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=docm_vcf,
			pos="116,278",
			rects="84,268.5,148,287.5",
			width=0.88889];
		normal_cram	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 310.5 268.5 310.5 287.5 391.5 287.5 391.5 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 351 275.5 0 65 11 -normal_cram ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=normal_cram,
			pos="351,278",
			rects="310.5,268.5,391.5,287.5",
			width=1.125];
		tumor_cram	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 230 268.5 230 287.5 306 287.5 306 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 268 275.5 0 60 10 -tumor_cram ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=tumor_cram,
			pos="268,278",
			rects="230,268.5,306,287.5",
			width=1.0556];
		reference	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16.5 268.5 16.5 287.5 79.5 287.5 79.5 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 48 275.5 0 47 9 -reference ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=reference,
			pos="48,278",
			rects="16.5,268.5,79.5,287.5",
			width=0.875];
		interval_list	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 152 268.5 152 287.5 226 287.5 226 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 189 275.5 0 58 13 -interval_list ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=interval_list,
			pos="189,278",
			rects="152,268.5,226,287.5",
			width=1.0278];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 142 8 142 63 317 63 317 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 196 15 0 92 16 -Workflow Outputs ",
			bb="142,8,317,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="196,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		filtered_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 237.5 35.5 237.5 54.5 308.5 54.5 308.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 273 42.5 0 55 12 -filtered_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=filtered_vcf,
			pos="273,45",
			rects="237.5,35.5,308.5,54.5",
			width=0.98611];
		unfiltered_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 150.5 35.5 150.5 54.5 233.5 54.5 233.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 192 42.5 0 67 14 -unfiltered_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=unfiltered_vcf,
			pos="192,45",
			rects="150.5,35.5,233.5,54.5",
			width=1.1528];
	}
	GATK_haplotype_caller	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 116 215.5 116 234.5 266 234.5 266 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 191 222.5 0 134 26 -HaplotypeCaller (GATK 3.6) ",
		height=0.27778,
		label="HaplotypeCaller (GATK 3.6)",
		pos="191,225",
		rects="116,215.5,266,234.5",
		width=2.0833];
	docm_vcf -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 122.8 268.51 129.18 261 139.31 250.14 150 243 152.73 241.17 155.69 239.48 158.73 237.94 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 159.67 240.2 164.97 235.02 157.6 235.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 169.5 245.6 0 39 8 -docm_vcf ",
		label=docm_vcf,
		lp="169.5,247.5",
		pos="e,166.35,234.38 122.8,268.51 129.18,261 139.31,250.14 150,243 152.73,241.17 155.69,239.48 158.73,237.94"];
	docm_filter	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 239.5 170.5 239.5 189.5 308.5 189.5 308.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 274 177.5 0 53 11 -docm filter ",
		height=0.27778,
		label="docm filter",
		pos="274,180",
		rects="239.5,170.5,308.5,189.5",
		width=0.95833];
	normal_cram -> docm_filter	[_draw_="c 7 -#000000 B 7 350.05 268.56 349.01 261.46 346.94 251.2 343 243 332.89 221.98 312.13 204.9 296.02 194.03 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 297.47 192.06 290.26 190.31 294.81 196.17 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 364.5 223.1 0 53 11 -normal_cram ",
		label=normal_cram,
		lp="364.5,225",
		pos="e,288.99,189.48 350.05,268.56 349.01,261.46 346.94,251.2 343,243 332.89,221.98 312.13,204.9 296.02,194.03"];
	normal_cram -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 331.88 268.61 311.69 259.83 281.13 246.8 269 243 261.16 240.54 252.78 238.31 244.51 236.34 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 245.16 233.97 237.79 234.79 244.06 238.75 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 316.5 245.6 0 53 11 -normal_cram ",
		label=normal_cram,
		lp="316.5,247.5",
		pos="e,236.32,234.44 331.88,268.61 311.69,259.83 281.13,246.8 269,243 261.16,240.54 252.78,238.31 244.51,236.34"];
	tumor_cram -> docm_filter	[_draw_="c 7 -#000000 B 4 268.51 268.82 269.49 253.17 271.64 218.71 272.94 197.91 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 275.39 198.09 273.38 190.95 270.5 197.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 295.5 223.1 0 49 10 -tumor_cram ",
		label=tumor_cram,
		lp="295.5,225",
		pos="e,273.47,189.44 268.51,268.82 269.49,253.17 271.64,218.71 272.94,197.91"];
	tumor_cram -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 262.24 268.68 256.59 261.06 247.34 249.96 237 243 234.14 241.07 231.03 239.33 227.83 237.76 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 229.03 235.61 221.64 235.03 227.05 240.1 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 257.5 245.6 0 21 4 -cram ",
		label=cram,
		lp="257.5,247.5",
		pos="e,220.25,234.41 262.24,268.68 256.59,261.06 247.34,249.96 237,243 234.14,241.07 231.03,239.33 227.83,237.76"];
	reference -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 57.4 268.62 66.76 260.75 81.89 249.26 97 243 103.17 240.45 109.72 238.27 116.38 236.43 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 116.6 238.9 122.77 234.78 115.38 234.15 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 117 245.6 0 40 9 -reference ",
		label=reference,
		lp="117,247.5",
		pos="e,124.24,234.41 57.4,268.62 66.763,260.75 81.886,249.26 97,243 103.17,240.45 109.72,238.27 116.38,236.43"];
	interval_list -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 4 189.33 268.58 189.61 261.52 190.01 251.24 190.35 242.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 192.79 242.87 190.62 235.78 187.89 242.68 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 213.5 245.6 0 47 13 -interval_list ",
		label=interval_list,
		lp="213.5,247.5",
		pos="e,190.68,234.26 189.33,268.58 189.61,261.52 190.01,251.24 190.35,242.55"];
	index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 243 80.5 243 99.5 305 99.5 305 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 274 87.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="274,90",
		rects="243,80.5,305,99.5",
		width=0.86111];
	index -> filtered_vcf	[_draw_="c 7 -#000000 B 4 273.81 80.71 273.69 75.59 273.53 68.85 273.39 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 275.84 62.72 273.23 55.78 270.94 62.83 ",
		pos="e,273.19,54.265 273.81,80.709 273.69,75.593 273.53,68.848 273.39,62.666"];
	bgzip	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 241.5 125.5 241.5 144.5 306.5 144.5 306.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 274 132.5 0 49 9 -bgzip VCF ",
		height=0.27778,
		label="bgzip VCF",
		pos="274,135",
		rects="241.5,125.5,306.5,144.5",
		width=0.90278];
	bgzip -> index	[_draw_="c 7 -#000000 B 4 274 125.71 274 120.59 274 113.85 274 107.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 276.45 107.78 274 100.78 271.55 107.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 280.5 110.6 0 13 3 -vcf ",
		label=vcf,
		lp="280.5,112.5",
		pos="e,274,99.265 274,125.71 274,120.59 274,113.85 274,107.67"];
	docm_filter -> bgzip	[_draw_="c 7 -#000000 B 4 274 170.71 274 165.59 274 158.85 274 152.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 276.45 152.78 274 145.78 271.55 152.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 280.5 155.6 0 13 4 -file ",
		label=file,
		lp="280.5,157.5",
		pos="e,274,144.27 274,170.71 274,165.59 274,158.85 274,152.67"];
	GATK_haplotype_caller -> unfiltered_vcf	[_draw_="c 7 -#000000 B 10 191.31 215.76 191.6 207.1 192 193.1 192 181 192 181 192 181 192 89 192 80.31 192 70.63 192 62.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 194.45 62.76 192 55.76 189.55 62.76 ",
		pos="e,192,54.243 191.31,215.76 191.6,207.1 192,193.1 192,181 192,181 192,181 192,89 192,80.308 192,70.627 192,62.655"];
	GATK_haplotype_caller -> docm_filter	[_draw_="c 7 -#000000 B 7 202.2 215.58 209.78 210.11 220.18 203.09 230 198 233.72 196.07 237.71 194.23 241.72 192.53 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 242.41 194.89 247.97 189.99 240.56 190.35 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 250 200.6 0 40 8 -docm_out ",
		label=docm_out,
		lp="250,202.5",
		pos="e,249.37,189.42 202.2,215.58 209.78,210.11 220.18,203.09 230,198 233.72,196.07 237.71,194.23 241.72,192.53"];
}