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			label=allele_specific_binding_thresholds,
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			rects="743.5,366.5,926.5,385.5",
			width=2.5417];
		normal_sample_name	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 2773.5 366.5 2773.5 385.5 2898.5 385.5 2898.5 366.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2836 373.5 0 109 18 -normal_sample_name ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=normal_sample_name,
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			rects="2773.5,366.5,2898.5,385.5",
			width=1.7361];
		epitope_lengths	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 2902.5 366.5 2902.5 385.5 2997.5 385.5 2997.5 366.5 ",
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			label=epitope_lengths,
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			rects="2902.5,366.5,2997.5,385.5",
			width=1.3194];
		trna_vaf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 3001.5 366.5 3001.5 385.5 3058.5 385.5 3058.5 366.5 ",
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			fillcolor="#94DDF4",
			height=0.27778,
			label=trna_vaf,
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			rects="3001.5,366.5,3058.5,385.5",
			width=0.79167];
		expn_val	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 3062.5 366.5 3062.5 385.5 3123.5 385.5 3123.5 366.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3093 373.5 0 45 8 -expn_val ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=expn_val,
			pos="3093,376",
			rects="3062.5,366.5,3123.5,385.5",
			width=0.84722];
		net_chop_method	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 3128 366.5 3128 385.5 3232 385.5 3232 366.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3180 373.5 0 88 15 -net_chop_method ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=net_chop_method,
			pos="3180,376",
			rects="3128,366.5,3232,385.5",
			width=1.4444];
	}
	pvacseq	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2951 88.5 2951 107.5 3029 107.5 3029 88.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2990 95.5 0 62 11 -run pVACseq ",
		height=0.27778,
		label="run pVACseq",
		pos="2990,98",
		rects="2951,88.5,3029,107.5",
		width=1.0833];
	normal_cov -> pvacseq	[_draw_="c 7 -#000000 B 13 4333.26 366.77 4327.04 357.02 4318 340.09 4318 324 4318 324 4318 324 4318 142 4318 97.18 4162.7 119.23 4118 116 \
3902.87 100.45 3222.94 99.07 3037.25 98.99 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3037.3 96.54 3030.3 98.99 3037.3 101.44 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 4341.5 231.1 0 47 10 -normal_cov ",
		label=normal_cov,
		lp="4341.5,233",
		pos="e,3028.8,98.989 4333.3,366.77 4327,357.02 4318,340.09 4318,324 4318,324 4318,324 4318,142 4318,97.182 4162.7,119.23 4118,116 3902.9,\
100.45 3222.9,99.073 3037.3,98.992"];
	add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1410.5 223.5 1410.5 242.5 1553.5 242.5 1553.5 223.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1482 230.5 0 127 26 -add expression info to vcf ",
		height=0.27778,
		label="add expression info to vcf",
		pos="1482,233",
		rects="1410.5,223.5,1553.5,242.5",
		width=1.9861];
	gene_expression_file -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 10 990.82 366.57 992.01 358.88 994.91 347.72 1002 341 1112 236.69 1181.24 274.53 1331 251 1362.06 246.12 1371.82 \
246.68 1403.64 243.34 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1403.54 245.82 1410.24 242.63 1403.01 240.95 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1089.5 298.6 0 61 15 -expression_file ",
		label=expression_file,
		lp="1089.5,300.5",
		pos="e,1411.7,242.46 990.82,366.57 992.01,358.88 994.91,347.72 1002,341 1112,236.69 1181.2,274.53 1331,251 1362.1,246.12 1371.8,246.68 \
1403.6,243.34"];
	trna_cov -> pvacseq	[_draw_="c 7 -#000000 B 10 3261.35 366.62 3256.32 356.74 3249 339.68 3249 324 3249 324 3249 324 3249 142 3249 120.77 3111.81 107.66 3037.12 \
102.1 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3037.44 99.67 3030.28 101.6 3037.09 104.56 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3266.5 231.1 0 35 8 -trna_cov ",
		label=trna_cov,
		lp="3266.5,233",
		pos="e,3028.8,101.49 3261.4,366.62 3256.3,356.74 3249,339.68 3249,324 3249,324 3249,324 3249,142 3249,120.77 3111.8,107.66 3037.1,102.1"];
	exclude_nas -> pvacseq	[_draw_="c 7 -#000000 B 10 3331.47 366.5 3324.67 356.78 3315 340.12 3315 324 3315 324 3315 324 3315 142 3315 114.33 3127.44 103.88 3037.29 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3037.48 98.02 3030.39 100.21 3037.3 102.91 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3340.5 231.1 0 51 11 -exclude_nas ",
		label=exclude_nas,
		lp="3340.5,233",
		pos="e,3028.9,100.15 3331.5,366.5 3324.7,356.78 3315,340.12 3315,324 3315,324 3315,324 3315,142 3315,114.33 3127.4,103.88 3037.3,100.46"];
	variants_to_table	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 388.5 88.5 388.5 107.5 529.5 107.5 529.5 88.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 459 95.5 0 125 25 -SelectVariants (GATK 3.6) ",
		height=0.27778,
		label="SelectVariants (GATK 3.6)",
		pos="459,98",
		rects="388.5,88.5,529.5,107.5",
		width=1.9583];
	variants_to_table_genotype_fields -> variants_to_table	[_draw_="c 7 -#000000 B 10 273.27 366.62 292.18 358.92 314 345.4 314 324 314 324 314 324 314 142 314 126.08 346.54 115.59 380.79 108.96 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 381.12 111.39 387.56 107.72 380.23 106.58 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 347 231.1 0 66 15 -genotype_fields ",
		label=genotype_fields,
		lp="347,233",
		pos="e,389.05,107.44 273.27,366.62 292.18,358.92 314,345.4 314,324 314,324 314,324 314,142 314,126.08 346.54,115.59 380.79,108.96"];
	maximum_transcript_support_level -> pvacseq	[_draw_="c 7 -#000000 B 10 3458.45 366.51 3443.7 358.01 3425 343.41 3425 324 3425 324 3425 324 3425 142 3425 103.4 3150.26 98.99 3037.46 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3037.5 96.36 3030.5 98.81 3037.5 101.26 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3496 231.1 0 142 32 -maximum_transcript_support_level ",
		label=maximum_transcript_support_level,
		lp="3496,233",
		pos="e,3029,98.806 3458.4,366.51 3443.7,358.01 3425,343.41 3425,324 3425,324 3425,324 3425,142 3425,103.4 3150.3,98.995 3037.5,98.812"];
	net_chop_threshold -> pvacseq	[_draw_="c 7 -#000000 B 10 3623.05 366.74 3614.77 357.23 3603 340.77 3603 324 3603 324 3603 324 3603 142 3603 113.66 3180.56 102.74 3037.05 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3037.37 97.4 3030.32 99.71 3037.27 102.3 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3643.5 231.1 0 81 18 -net_chop_threshold ",
		label=net_chop_threshold,
		lp="3643.5,233",
		pos="e,3028.8,99.684 3623.1,366.74 3614.8,357.23 3603,340.77 3603,324 3603,324 3603,324 3603,142 3603,113.66 3180.6,102.74 3037,99.847"];
	tumor_rna_bam_readcount	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 1158 313.5 1158 332.5 1298 332.5 1298 313.5 ",
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		fillcolor="#F3CEA1",
		height=0.27778,
		label="bam_readcount workflow",
		pos="1228,323",
		rects="1158,313.5,1298,332.5",
		width=1.9444];
	detect_variants_vcf -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 7 1128.62 366.64 1144.18 359.68 1166.98 349.57 1187 341 1191.16 339.22 1195.57 337.36 1199.9 335.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1200.6 337.91 1206.13 332.96 1198.72 333.39 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1193.5 343.6 0 13 3 -vcf ",
		label=vcf,
		lp="1193.5,345.5",
		pos="e,1207.5,332.38 1128.6,366.64 1144.2,359.68 1167,349.57 1187,341 1191.2,339.22 1195.6,337.36 1199.9,335.55"];
	phased_proximal_variants_vcf -> pvacseq	[_draw_="c 7 -#000000 B 10 3759.27 366.5 3746.14 357.71 3729 342.66 3729 324 3729 324 3729 324 3729 142 3729 107.22 3200.45 100.51 3037.35 \
99.27 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3037.48 96.82 3030.46 99.22 3037.45 101.72 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3790 231.1 0 122 28 -phased_proximal_variants_vcf ",
		label=phased_proximal_variants_vcf,
		lp="3790,233",
		pos="e,3029,99.21 3759.3,366.5 3746.1,357.71 3729,342.66 3729,324 3729,324 3729,324 3729,142 3729,107.22 3200.5,100.51 3037.3,99.271"];
	normal_vaf -> pvacseq	[_draw_="c 7 -#000000 B 10 3891.81 366.69 3886.18 356.88 3878 339.87 3878 324 3878 324 3878 324 3878 142 3878 99.51 3220.67 98.3 3037.11 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3037.23 96.34 3030.24 98.82 3037.25 101.24 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3901 231.1 0 46 10 -normal_vaf ",
		label=normal_vaf,
		lp="3901,233",
		pos="e,3028.7,98.82 3891.8,366.69 3886.2,356.88 3878,339.87 3878,324 3878,324 3878,324 3878,142 3878,99.506 3220.7,98.303 3037.1,98.795"];
	tdna_vaf -> pvacseq	[_draw_="c 7 -#000000 B 10 3962.08 366.66 3956.75 356.81 3949 339.77 3949 324 3949 324 3949 324 3949 142 3949 95.81 3229.74 97.37 3037.02 \
98.62 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3037.28 96.17 3030.3 98.67 3037.31 101.07 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3967 231.1 0 36 8 -tdna_vaf ",
		label=tdna_vaf,
		lp="3967,233",
		pos="e,3028.8,98.677 3962.1,366.66 3956.8,356.81 3949,339.77 3949,324 3949,324 3949,324 3949,142 3949,95.813 3229.7,97.374 3037,98.622"];
	rnaseq_bam -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 7 1205.13 366.71 1202.38 359.53 1199.83 349.06 1204 341 1204.5 340.03 1205.09 339.1 1205.74 338.22 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1207.41 340.01 1210.66 333.35 1203.96 336.53 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1213.5 343.6 0 19 3 -bam ",
		label=bam,
		lp="1213.5,345.5",
		pos="e,1211.7,332.28 1205.1,366.71 1202.4,359.53 1199.8,349.06 1204,341 1204.5,340.03 1205.1,339.1 1205.7,338.22"];
	add_vep_fields_to_table	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 733.5 35.5 733.5 54.5 890.5 54.5 890.5 35.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 812 42.5 0 141 28 -add VEP annotation to report ",
		height=0.27778,
		label="add VEP annotation to report",
		pos="812,45",
		rects="733.5,35.5,890.5,54.5",
		width=2.1806];
	vep_to_table_fields -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 16 417.9 366.65 434 358.41 454 344.12 454 324 454 324 454 324 454 232 454 220.31 451.71 215.86 458 206 470.06 187.08 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 780.62 59.64 786.39 54.97 778.97 55.03 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 479 208.6 0 42 10 -vep_fields ",
		label=vep_fields,
		lp="479,210.5",
		pos="e,787.81,54.462 417.9,366.65 434,358.41 454,344.12 454,324 454,324 454,324 454,232 454,220.31 451.71,215.86 458,206 470.06,187.08 \
480.25,188.64 500,178 598.21,125.09 722.16,78.124 779.8,57.337"];
	n_threads -> pvacseq	[_draw_="c 7 -#000000 B 13 4027.53 366.73 4021.61 356.95 4013 339.98 4013 324 4013 324 4013 324 4013 142 4013 80.46 3938.21 122.39 3877 116 \
3711.92 98.76 3196.14 98.5 3037.14 98.85 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3037.46 96.4 3030.47 98.86 3037.47 101.3 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 4033.5 231.1 0 41 9 -n_threads ",
		label=n_threads,
		lp="4033.5,233",
		pos="e,3029,98.867 4027.5,366.73 4021.6,356.95 4013,339.98 4013,324 4013,324 4013,324 4013,142 4013,80.461 3938.2,122.39 3877,116 3711.9,\
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	add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 1360 268.5 1360 287.5 1604 287.5 1604 268.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1482 275.5 0 228 46 -Add snv and indel bam-readcount files to a vcf ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="Add snv and indel bam-readcount files to a vcf",
		pos="1482,278",
		rects="1360,268.5,1604,287.5",
		width=3.3889];
	sample_name -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 10 1590.52 366.56 1575.95 359.71 1557.5 348.61 1547 333 1537.66 319.11 1551.24 308.4 1540 296 1538.71 294.58 1537.31 \
293.27 1535.82 292.08 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1537.26 290.09 1530.06 288.31 1534.58 294.19 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1576 321.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="1576,323",
		pos="e,1528.8,287.48 1590.5,366.56 1576,359.71 1557.5,348.61 1547,333 1537.7,319.11 1551.2,308.4 1540,296 1538.7,294.58 1537.3,293.27 \
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	add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1589.5 178.5 1589.5 197.5 1732.5 197.5 1732.5 178.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1661 185.5 0 127 26 -add expression info to vcf ",
		height=0.27778,
		label="add expression info to vcf",
		pos="1661,188",
		rects="1589.5,178.5,1732.5,197.5",
		width=1.9861];
	sample_name -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 10 1628.59 366.5 1642.8 357.9 1661 343.15 1661 324 1661 324 1661 324 1661 232 1661 223.31 1661 213.63 1661 205.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1663.45 205.76 1661 198.76 1658.55 205.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1690 276.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="1690,278",
		pos="e,1661,197.24 1628.6,366.5 1642.8,357.9 1661,343.15 1661,324 1661,324 1661,324 1661,232 1661,223.31 1661,213.63 1661,205.65"];
	sample_name -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 13 1593.17 366.66 1584.73 363.32 1574.54 359.84 1565 358 1513.26 348.03 1377.7 367.51 1328 350 1321.71 347.79 1322.09 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1299.48 332.36 1292.08 332.85 1298.17 337.08 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1343.5 343.6 0 31 6 -sample ",
		label=sample,
		lp="1343.5,345.5",
		pos="e,1290.6,332.45 1593.2,366.66 1584.7,363.32 1574.5,359.84 1565,358 1513.3,348.03 1377.7,367.51 1328,350 1321.7,347.79 1322.1,343.7 \
1316,341 1310.5,338.57 1304.7,336.49 1298.8,334.71"];
	sample_name -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 13 1591.19 366.59 1583.11 363.56 1573.72 360.32 1565 358 1560.86 356.9 1263.76 308.28 1261 305 1240.83 281.01 1249.69 \
290.15 1304 268 1324.07 259.81 1374.12 250.59 1416.05 243.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1416.3 246.26 1422.82 242.73 1415.52 241.42 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1290 298.6 0 58 11 -sample_name ",
		label=sample_name,
		lp="1290,300.5",
		pos="e,1424.3,242.49 1591.2,366.59 1583.1,363.56 1573.7,360.32 1565,358 1560.9,356.9 1263.8,308.28 1261,305 1240.8,281.01 1249.7,290.15 \
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	sample_name -> pvacseq	[_draw_="c 7 -#000000 B 22 1633.76 366.6 1641.91 362.58 1650.7 357.08 1657 350 1674.23 330.64 1659.04 312.53 1679 296 1692.97 284.44 1702.49 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2942.65 101.54 2949.64 99.07 2942.64 96.64 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1846 231.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="1846,233",
		pos="e,2951.2,99.07 1633.8,366.6 1641.9,362.58 1650.7,357.08 1657,350 1674.2,330.64 1659,312.53 1679,296 1693,284.44 1702.5,295.5 1719,\
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	prediction_algorithms -> pvacseq	[_draw_="c 7 -#000000 B 13 4120.69 366.8 4110.36 357.59 4096 341.61 4096 324 4096 324 4096 324 4096 142 4096 74.78 4013.92 122.39 3947 116 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3037.3 96.42 3030.3 98.88 3037.31 101.32 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 4140.5 231.1 0 89 21 -prediction_algorithms ",
		label=prediction_algorithms,
		lp="4140.5,233",
		pos="e,3028.8,98.886 4120.7,366.8 4110.4,357.59 4096,341.61 4096,324 4096,324 4096,324 4096,142 4096,74.777 4013.9,122.39 3947,116 3767.3,\
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	top_score_metric -> pvacseq	[_draw_="c 7 -#000000 B 13 4239.34 366.69 4231.35 357.14 4220 340.63 4220 324 4220 324 4220 324 4220 142 4220 97.84 4067.04 119.26 4023 116 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3037.28 96.61 3030.28 99.04 3037.27 101.51 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 4255 231.1 0 70 16 -top_score_metric ",
		label=top_score_metric,
		lp="4255,233",
		pos="e,3028.8,99.042 4239.3,366.69 4231.4,357.14 4220,340.63 4220,324 4220,324 4220,324 4220,142 4220,97.843 4067,119.26 4023,116 3827.4,\
101.53 3212.3,99.377 3037,99.056"];
	transcript_expression_file -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 13 1828.82 366.65 1830.32 348.22 1832.32 302.96 1820 268 1811.93 245.1 1805.88 240.46 1789 223 1780.16 213.86 1777.72 \
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1855.5 276.1 0 61 15 -expression_file ",
		label=expression_file,
		lp="1855.5,278",
		pos="e,1732.3,195.84 1828.8,366.65 1830.3,348.22 1832.3,302.96 1820,268 1811.9,245.1 1805.9,240.46 1789,223 1780.2,213.86 1777.7,210.93 \
1766,206 1757.9,202.6 1749.2,199.87 1740.4,197.69"];
	downstream_sequence_length -> pvacseq	[_draw_="c 7 -#000000 B 10 1993.95 366.74 2002.23 357.23 2014 340.77 2014 324 2014 324 2014 324 2014 142 2014 94.94 2747.64 97.16 2942.79 \
98.58 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2942.61 101.03 2949.62 98.63 2942.64 96.13 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2077 231.1 0 126 26 -downstream_sequence_length ",
		label=downstream_sequence_length,
		lp="2077,233",
		pos="e,2951.1,98.645 1993.9,366.74 2002.2,357.23 2014,340.77 2014,324 2014,324 2014,324 2014,142 2014,94.944 2747.6,97.16 2942.8,98.582"];
	fasta_size -> pvacseq	[_draw_="c 7 -#000000 B 13 2121.4 366.68 2140.63 355.77 2171 336.55 2171 324 2171 324 2171 324 2171 142 2171 90.9 2232.3 122.43 2283 116 \
2411.1 99.76 2806.01 98.73 2942.79 98.88 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2192 231.1 0 42 10 -fasta_size ",
		label=fasta_size,
		lp="2192,233",
		pos="e,2951,98.891 2121.4,366.68 2140.6,355.77 2171,336.55 2171,324 2171,324 2171,324 2171,142 2171,90.899 2232.3,122.43 2283,116 2411.1,\
99.763 2806,98.732 2942.8,98.88"];
	additional_report_columns -> pvacseq	[_draw_="c 7 -#000000 B 10 2220.37 366.59 2225.11 356.68 2232 339.59 2232 324 2232 324 2232 324 2232 142 2232 106.21 2777.68 100.2 2943.06 \
99.2 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2942.61 101.65 2949.59 99.16 2942.58 96.75 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2286.5 231.1 0 109 25 -additional_report_columns ",
		label=additional_report_columns,
		lp="2286.5,233",
		pos="e,2951.1,99.151 2220.4,366.59 2225.1,356.68 2232,339.59 2232,324 2232,324 2232,324 2232,142 2232,106.21 2777.7,100.2 2943.1,99.198"];
	reference_fasta -> variants_to_table	[_draw_="c 7 -#000000 B 10 504 366.7 504 356.6 504 339.05 504 324 504 324 504 324 504 142 504 129.27 494.47 119.15 484.18 111.93 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 485.55 109.9 478.32 108.22 482.92 114.03 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 524 231.1 0 40 9 -reference ",
		label=reference,
		lp="524,233",
		pos="e,477.04,107.4 504,366.7 504,356.6 504,339.05 504,324 504,324 504,324 504,142 504,129.27 494.47,119.15 484.18,111.93"];
	reference_fasta -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 10 525.53 366.56 534.51 363.38 545.13 360.03 555 358 642.81 339.92 666.51 346.39 756 341 894.64 332.65 1056.46 327.9 \
1150.08 325.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1149.92 328.11 1156.86 325.49 1149.8 323.21 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 788.5 343.6 0 65 15 -reference_fasta ",
		label=reference_fasta,
		lp="788.5,345.5",
		pos="e,1158.4,325.45 525.53,366.56 534.51,363.38 545.13,360.03 555,358 642.81,339.92 666.51,346.39 756,341 894.64,332.65 1056.5,327.9 \
1150.1,325.65"];
	variants_to_table_fields -> variants_to_table	[_draw_="c 7 -#000000 B 10 109.87 366.51 128.51 358.74 150 345.2 150 324 150 324 150 324 150 142 150 118.76 288.91 107.35 380.45 102.36 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 380.51 104.81 387.37 101.99 380.25 99.92 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 161.5 231.1 0 23 6 -fields ",
		label=fields,
		lp="161.5,233",
		pos="e,388.88,101.91 109.87,366.51 128.51,358.74 150,345.2 150,324 150,324 150,324 150,142 150,118.76 288.91,107.35 380.45,102.36"];
	readcount_minimum_mapping_quality -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 7 1298.29 366.55 1268.47 361.51 1236.86 355.11 1232 350 1229.59 347.47 1228.26 344.12 1227.59 340.68 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1275.5 343.6 0 87 19 -min_mapping_quality ",
		label=min_mapping_quality,
		lp="1275.5,345.5",
		pos="e,1227,332.32 1298.3,366.55 1268.5,361.51 1236.9,355.11 1232,350 1229.6,347.47 1228.3,344.12 1227.6,340.68"];
	readcount_minimum_base_quality -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 7 689.83 366.51 706.66 363.43 726.18 360.18 744 358 886.44 340.56 1053.64 331.28 1149.56 327.01 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 951.5 343.6 0 71 16 -min_base_quality ",
		label=min_base_quality,
		lp="951.5,345.5",
		pos="e,1158.1,326.64 689.83,366.51 706.66,363.43 726.18,360.18 744,358 886.44,340.56 1053.6,331.28 1149.6,327.01"];
	peptide_sequence_length -> pvacseq	[_draw_="c 7 -#000000 B 10 2364.53 366.7 2365.12 356.61 2366 339.06 2366 324 2366 324 2366 324 2366 142 2366 113.09 2798.01 102.52 2943.11 \
99.78 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2942.97 102.24 2949.92 99.66 2942.88 97.34 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2419 231.1 0 106 23 -peptide_sequence_length ",
		label=peptide_sequence_length,
		lp="2419,233",
		pos="e,2951.4,99.63 2364.5,366.7 2365.1,356.61 2366,339.06 2366,324 2366,324 2366,324 2366,142 2366,113.09 2798,102.52 2943.1,99.785"];
	alleles -> pvacseq	[_draw_="c 7 -#000000 B 10 2477.25 366.56 2501.22 352.33 2547 325.01 2547 324 2547 324 2547 324 2547 142 2547 102.56 2828.7 98.68 2942.83 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2942.56 101.17 2949.56 98.73 2942.56 96.27 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2561 231.1 0 28 7 -alleles ",
		label=alleles,
		lp="2561,233",
		pos="e,2951.1,98.734 2477.2,366.56 2501.2,352.33 2547,325.01 2547,324 2547,324 2547,324 2547,142 2547,102.56 2828.7,98.68 2942.8,98.724"];
	tdna_cov -> pvacseq	[_draw_="c 7 -#000000 B 10 2539.42 366.62 2566.85 353.3 2617 328.35 2617 324 2617 324 2617 324 2617 142 2617 109.58 2842.28 101.58 2942.69 \
99.62 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2942.67 102.07 2949.62 99.5 2942.58 97.18 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2635.5 231.1 0 37 8 -tdna_cov ",
		label=tdna_cov,
		lp="2635.5,233",
		pos="e,2951.1,99.468 2539.4,366.62 2566.9,353.3 2617,328.35 2617,324 2617,324 2617,324 2617,142 2617,109.58 2842.3,101.58 2942.7,99.624"];
	netmhc_stab -> pvacseq	[_draw_="c 7 -#000000 B 10 2618.12 366.61 2642.41 356.27 2679 338.33 2679 324 2679 324 2679 324 2679 142 2679 115.69 2855.89 104.61 2942.86 \
100.75 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2942.84 103.2 2949.73 100.45 2942.63 98.31 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2705.5 231.1 0 53 11 -netmhc_stab ",
		label=netmhc_stab,
		lp="2705.5,233",
		pos="e,2951.2,100.39 2618.1,366.61 2642.4,356.27 2679,338.33 2679,324 2679,324 2679,324 2679,142 2679,115.69 2855.9,104.61 2942.9,100.75"];
	expression_tool -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 13 1709.03 366.71 1716.07 348.04 1734.82 301.68 1759 268 1768.16 255.24 1777.99 257.52 1784 243 1787.4 234.79 1789.38 \
230.07 1784 223 1776.19 212.73 1750.03 204.77 1723.83 199.14 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1724.56 196.79 1717.21 197.78 1723.57 201.59 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1791 276.1 0 64 15 -expression_tool ",
		label=expression_tool,
		lp="1791,278",
		pos="e,1715.7,197.47 1709,366.71 1716.1,348.04 1734.8,301.68 1759,268 1768.2,255.24 1778,257.52 1784,243 1787.4,234.79 1789.4,230.07 \
1784,223 1776.2,212.73 1750,204.77 1723.8,199.14"];
	expression_tool -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 7 1700.93 366.63 1687.99 346.05 1651.51 292.88 1606 268 1586.11 257.13 1562.5 249.53 1541.24 244.33 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1542.06 242 1534.69 242.79 1540.95 246.77 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1684 298.6 0 64 15 -expression_tool ",
		label=expression_tool,
		lp="1684,300.5",
		pos="e,1533.2,242.44 1700.9,366.63 1688,346.05 1651.5,292.88 1606,268 1586.1,257.13 1562.5,249.53 1541.2,244.33"];
	minimum_fold_change -> pvacseq	[_draw_="c 7 -#000000 B 10 2718.61 366.68 2731.2 357.82 2748 342.53 2748 324 2748 324 2748 324 2748 142 2748 122.42 2872.39 108.81 2942.81 \
102.68 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2942.84 105.13 2949.61 102.1 2942.43 100.25 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2794 231.1 0 92 19 -minimum_fold_change ",
		label=minimum_fold_change,
		lp="2794,233",
		pos="e,2951.1,101.97 2718.6,366.68 2731.2,357.82 2748,342.53 2748,324 2748,324 2748,324 2748,142 2748,122.42 2872.4,108.81 2942.8,102.68"];
	normal_sample_name -> pvacseq	[_draw_="c 7 -#000000 B 10 2840.37 366.59 2845.11 356.68 2852 339.59 2852 324 2852 324 2852 324 2852 142 2852 122.5 2902.88 110.82 2942.85 \
104.66 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2943.13 107.1 2949.69 103.65 2942.41 102.25 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2897 231.1 0 90 18 -normal_sample_name ",
		label=normal_sample_name,
		lp="2897,233",
		pos="e,2951.2,103.43 2840.4,366.59 2845.1,356.68 2852,339.59 2852,324 2852,324 2852,324 2852,142 2852,122.5 2902.9,110.82 2942.9,104.66"];
	epitope_lengths -> pvacseq	[_draw_="c 7 -#000000 B 10 2950.53 366.7 2951.12 356.61 2952 339.06 2952 324 2952 324 2952 324 2952 142 2952 130.09 2960.28 119.93 2969.12 \
112.48 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2970.58 114.45 2974.65 108.25 2967.6 110.55 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2985.5 231.1 0 67 15 -epitope_lengths ",
		label=epitope_lengths,
		lp="2985.5,233",
		pos="e,2975.9,107.33 2950.5,366.7 2951.1,356.61 2952,339.06 2952,324 2952,324 2952,324 2952,142 2952,130.09 2960.3,119.93 2969.1,112.48"];
	trna_vaf -> pvacseq	[_draw_="c 7 -#000000 B 10 3029.47 366.7 3028.88 356.61 3028 339.06 3028 324 3028 324 3028 324 3028 142 3028 130.09 3019.72 119.93 3010.88 \
112.48 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3012.4 110.55 3005.35 108.25 3009.42 114.45 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3045 231.1 0 34 8 -trna_vaf ",
		label=trna_vaf,
		lp="3045,233",
		pos="e,3004.1,107.33 3029.5,366.7 3028.9,356.61 3028,339.06 3028,324 3028,324 3028,324 3028,142 3028,130.09 3019.7,119.93 3010.9,112.48"];
	expn_val -> pvacseq	[_draw_="c 7 -#000000 B 10 3089.85 366.84 3086.29 356.88 3081 339.46 3081 324 3081 324 3081 324 3081 142 3081 120.13 3059.26 109.37 3037.03 \
104.08 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3037.69 101.72 3030.34 102.68 3036.69 106.51 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3099 231.1 0 36 8 -expn_val ",
		label=expn_val,
		lp="3099,233",
		pos="e,3028.9,102.37 3089.8,366.84 3086.3,356.88 3081,339.46 3081,324 3081,324 3081,324 3081,142 3081,120.13 3059.3,109.37 3037,104.08"];
	net_chop_method -> pvacseq	[_draw_="c 7 -#000000 B 10 3172.05 366.74 3163.77 357.23 3152 340.77 3152 324 3152 324 3152 324 3152 142 3152 118.05 3085.01 107.12 3037.19 \
102.37 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3037.51 99.94 3030.31 101.72 3037.05 104.82 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3188.5 231.1 0 73 15 -net_chop_method ",
		label=net_chop_method,
		lp="3188.5,233",
		pos="e,3028.8,101.58 3172.1,366.74 3163.8,357.23 3152,340.77 3152,324 3152,324 3152,324 3152,142 3152,118.05 3085,107.12 3037.2,102.37"];
	variants_to_table -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 7 474.83 88.6 486.86 82.63 504.03 74.98 520 71 587.78 54.11 666.85 48.15 725.59 46.25 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 725.31 48.71 732.23 46.05 725.16 43.81 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 526.5 73.6 0 13 3 -tsv ",
		label=tsv,
		lp="526.5,75.5",
		pos="e,733.75,46.006 474.83,88.601 486.86,82.626 504.03,74.98 520,71 587.78,54.113 666.85,48.149 725.59,46.248"];
	add_vep_fields_to_table -> annotated_tsv;
	add_tumor_rna_bam_readcount_to_vcf -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 4 1482 268.71 1482 263.59 1482 256.85 1482 250.67 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1488.5 253.6 0 13 3 -vcf ",
		label=vcf,
		lp="1488.5,255.5",
		pos="e,1482,242.27 1482,268.71 1482,263.59 1482,256.85 1482,250.67"];
	index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1566 133.5 1566 152.5 1628 152.5 1628 133.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1597 140.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="1597,143",
		rects="1566,133.5,1628,152.5",
		width=0.86111];
	index -> variants_to_table	[_draw_="c 7 -#000000 B 7 1566.11 141.11 1484.85 138.76 1258.44 132.05 1070 125 878.58 117.84 653.49 107.86 537.27 102.59 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 537.71 100.16 530.6 102.29 537.48 105.05 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1076.5 118.6 0 13 3 -vcf ",
		label=vcf,
		lp="1076.5,120.5",
		pos="e,529.09,102.22 1566.1,141.11 1484.9,138.76 1258.4,132.05 1070,125 878.58,117.84 653.49,107.86 537.27,102.59"];
	index -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 4 1566.23 138.24 1453.19 124.41 1058.72 76.17 889.77 55.51 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 890.15 53.09 882.91 54.67 889.56 57.95 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1314.5 96.1 0 13 3 -vcf ",
		label=vcf,
		lp="1314.5,98",
		pos="e,881.4,54.488 1566.2,138.24 1453.2,124.41 1058.7,76.172 889.77,55.51"];
	index -> pvacseq	[_draw_="c 7 -#000000 B 7 1627.93 136.32 1663.86 130.01 1724.99 120.16 1778 116 2010.43 97.75 2748.5 98.36 2942.77 98.85 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2942.55 101.3 2949.56 98.87 2942.56 96.4 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1796.5 118.6 0 37 9 -input_vcf ",
		label=input_vcf,
		lp="1796.5,120.5",
		pos="e,2951.1,98.872 1627.9,136.32 1663.9,130.01 1725,120.16 1778,116 2010.4,97.752 2748.5,98.357 2942.8,98.85"];
	add_transcript_expression_data_to_vcf -> annotated_vcf	[_draw_="c 7 -#000000 B 10 1675.32 178.71 1701.92 163.72 1761.13 132.14 1815 116 1965.71 70.84 2012.51 101.72 2165 63 2171.27 61.41 2177.87 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2184.53 59.56 2190.26 54.86 2182.85 54.96 ",
		pos="e,2191.7,54.338 1675.3,178.71 1701.9,163.72 1761.1,132.14 1815,116 1965.7,70.839 2012.5,101.72 2165,63 2171.3,61.408 2177.9,59.302 \
2184.1,57.117"];
	add_transcript_expression_data_to_vcf -> index	[_draw_="c 7 -#000000 B 4 1648.36 178.5 1639.24 172.38 1626.77 164 1616.39 157.03 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1618.05 155.19 1610.87 153.32 1615.32 159.26 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1640.5 163.6 0 13 3 -vcf ",
		label=vcf,
		lp="1640.5,165.5",
		pos="e,1609.6,152.48 1648.4,178.5 1639.2,172.38 1626.8,164 1616.4,157.03"];
	tumor_rna_bam_readcount -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 1230.45 313.71 1232.69 307.71 1236.64 299.98 1243 296 1252.55 290.03 1325.39 289.05 1354.85 287.9 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1249.5 298.6 0 13 3 -vcf ",
		label=vcf,
		lp="1249.5,300.5",
		pos="e,1363.3,287.48 1230.4,313.71 1232.7,307.71 1236.6,299.98 1243,296 1252.5,290.03 1325.4,289.05 1354.9,287.9"];
	tumor_rna_bam_readcount -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 10 1294.44 313.53 1303.23 311.31 1311.97 308.52 1320 305 1326.11 302.32 1325.8 298.46 1332 296 1339.24 293.12 1351.22 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1365.29 291.07 1371.89 287.68 1364.62 286.21 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1381 298.6 0 98 21 -snv_bam_readcount_tsv ",
		label=snv_bam_readcount_tsv,
		lp="1381,300.5",
		pos="e,1373.4,287.47 1294.4,313.53 1303.2,311.31 1312,308.52 1320,305 1326.1,302.32 1325.8,298.46 1332,296 1339.2,293.12 1351.2,290.66 \
1365.3,288.59"];
	tumor_rna_bam_readcount -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 10 1297.81 320.1 1345.49 318.03 1404.04 313.76 1427 305 1433.23 302.62 1433.18 299.25 1439 296 1442.41 294.09 1446.08 \
292.29 1449.79 290.64 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1450.48 293 1455.98 288.02 1448.58 288.49 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1491 298.6 0 104 23 -indel_bam_readcount_tsv ",
		label=indel_bam_readcount_tsv,
		lp="1491,300.5",
		pos="e,1457.4,287.43 1297.8,320.1 1345.5,318.03 1404,313.76 1427,305 1433.2,302.62 1433.2,299.25 1439,296 1442.4,294.09 1446.1,292.29 \
1449.8,290.64"];
	add_gene_expression_data_to_vcf -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 4 1517.36 223.5 1546.17 216.58 1586.96 206.79 1617.72 199.4 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1618 201.85 1624.24 197.83 1616.86 197.08 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1593.5 208.6 0 13 3 -vcf ",
		label=vcf,
		lp="1593.5,210.5",
		pos="e,1625.7,197.48 1517.4,223.5 1546.2,216.58 1587,206.79 1617.7,199.4"];
	pvacseq -> mhc_i_all_epitopes	[_draw_="c 7 -#000000 B 7 3028.87 95.93 3097.61 93.51 3244.92 85.88 3367 63 3375.41 61.42 3384.34 59.17 3392.65 56.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3393.22 59.19 3399.25 54.87 3391.84 54.49 ",
		pos="e,3400.7,54.438 3028.9,95.933 3097.6,93.506 3244.9,85.876 3367,63 3375.4,61.424 3384.3,59.166 3392.6,56.808"];
	pvacseq -> mhc_i_filtered_epitopes	[_draw_="c 7 -#000000 B 10 2951.19 96.25 2876.26 94.63 2706.5 90.09 2564 80 2489.58 74.73 2470.55 75.49 2397 63 2386.65 61.24 2375.56 58.84 \
2365.3 56.4 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2366.12 54.08 2358.74 54.8 2364.96 58.84 ",
		pos="e,2357.3,54.441 2951.2,96.251 2876.3,94.627 2706.5,90.086 2564,80 2489.6,74.732 2470.6,75.492 2397,63 2386.6,61.242 2375.6,58.841 \
2365.3,56.398"];
	pvacseq -> mhc_ii_all_epitopes	[_draw_="c 7 -#000000 B 7 2951.08 97.06 2869.4 96.58 2674.38 92.15 2514 63 2505.23 61.41 2495.89 59.12 2487.23 56.73 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2488.04 54.41 2480.63 54.85 2486.69 59.12 ",
		pos="e,2479.2,54.435 2951.1,97.064 2869.4,96.578 2674.4,92.155 2514,63 2505.2,61.406 2495.9,59.116 2487.2,56.731"];
	pvacseq -> mhc_ii_filtered_epitopes	[_draw_="c 7 -#000000 B 7 2951.23 94.73 2888.46 90.69 2760.83 80.94 2654 63 2643.51 61.24 2632.26 58.84 2621.85 56.39 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2622.57 54.04 2615.19 54.79 2621.42 58.81 ",
		pos="e,2613.7,54.436 2951.2,94.733 2888.5,90.692 2760.8,80.937 2654,63 2643.5,61.238 2632.3,58.836 2621.9,56.392"];
	pvacseq -> mhc_i_ranked_epitopes	[_draw_="c 7 -#000000 B 7 2951.14 91.22 2910.73 85.01 2845.71 74.49 2790 63 2780.53 61.05 2770.39 58.72 2760.85 56.43 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2761.51 54.07 2754.13 54.79 2760.35 58.83 ",
		pos="e,2752.7,54.431 2951.1,91.217 2910.7,85.011 2845.7,74.485 2790,63 2780.5,61.047 2770.4,58.722 2760.9,56.429"];
	pvacseq -> combined_all_epitopes	[_draw_="c 7 -#000000 B 4 2967.54 88.58 2944.8 80.05 2909.49 66.81 2884.29 57.36 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2885.32 55.13 2877.91 54.97 2883.6 59.72 ",
		pos="e,2876.5,54.434 2967.5,88.578 2944.8,80.052 2909.5,66.81 2884.3,57.359"];
	pvacseq -> mhc_ii_ranked_epitopes	[_draw_="c 7 -#000000 B 4 2990 88.58 2990 81.52 2990 71.24 2990 62.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2992.45 62.78 2990 55.78 2987.55 62.78 ",
		pos="e,2990,54.265 2990,88.578 2990,81.523 2990,71.24 2990,62.547"];
	pvacseq -> combined_ranked_epitopes	[_draw_="c 7 -#000000 B 4 3014.11 88.58 3038.62 80.01 3076.75 66.7 3103.83 57.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3104.63 59.55 3110.43 54.93 3103.01 54.93 ",
		pos="e,3111.9,54.434 3014.1,88.578 3038.6,80.015 3076.8,66.695 3103.8,57.236"];
	pvacseq -> combined_filtered_epitopes	[_draw_="c 7 -#000000 B 7 3028.84 91.71 3073.06 85.52 3147.42 74.64 3211 63 3222.02 60.98 3233.84 58.6 3244.93 56.26 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3245.43 58.66 3251.76 54.8 3244.4 53.86 ",
		pos="e,3253.2,54.484 3028.8,91.705 3073.1,85.518 3147.4,74.636 3211,63 3222,60.983 3233.8,58.595 3244.9,56.256"];
	default1	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 1606.5 313.5 1606.5 332.5 1653.5 332.5 1653.5 313.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1630 320.5 0 31 5 -\"RNA\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"RNA\"",
		pos="1630,323",
		rects="1606.5,313.5,1653.5,332.5",
		width=0.65278];
	default1 -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 10 1606.73 314.23 1605.47 313.82 1604.22 313.4 1603 313 1579.91 305.38 1574.38 302.69 1551 296 1543.17 293.76 1534.79 \
291.54 1526.67 289.49 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1527.51 287.18 1520.13 287.86 1526.33 291.93 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1598.5 298.6 0 41 9 -data_type ",
		label=data_type,
		lp="1598.5,300.5",
		pos="e,1518.7,287.49 1606.7,314.23 1605.5,313.82 1604.2,313.4 1603,313 1579.9,305.38 1574.4,302.69 1551,296 1543.2,293.76 1534.8,291.54 \
1526.7,289.49"];
	default2	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 1334 223.5 1334 242.5 1406 242.5 1406 223.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1370 230.5 0 56 12 -\"transcript\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"transcript\"",
		pos="1370,233",
		rects="1334,223.5,1406,242.5",
		width=1];
	default2 -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 10 1405.74 223.85 1407.18 223.56 1408.6 223.27 1410 223 1455.54 214.13 1467.05 212.43 1513 206 1535.14 202.9 1559.21 \
199.96 1581.38 197.42 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1581.59 199.86 1588.27 196.63 1581.04 194.99 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1533.5 208.6 0 41 9 -data_type ",
		label=data_type,
		lp="1533.5,210.5",
		pos="e,1589.8,196.46 1405.7,223.85 1407.2,223.56 1408.6,223.27 1410,223 1455.5,214.13 1467.1,212.43 1513,206 1535.1,202.9 1559.2,199.96 \
1581.4,197.42"];
	default3	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 1306 268.5 1306 287.5 1356 287.5 1356 268.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1331 275.5 0 34 6 -\"gene\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"gene\"",
		pos="1331,278",
		rects="1306,268.5,1356,287.5",
		width=0.69444];
	default3 -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 7 1355.98 269.2 1357.34 268.79 1358.69 268.39 1360 268 1387.45 259.92 1418.53 251.26 1442.44 244.71 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1443.02 247.09 1449.13 242.88 1441.73 242.37 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1436.5 253.6 0 41 9 -data_type ",
		label=data_type,
		lp="1436.5,255.5",
		pos="e,1450.6,242.48 1356,269.2 1357.3,268.79 1358.7,268.39 1360,268 1387.5,259.92 1418.5,251.26 1442.4,244.71"];
}