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			fillcolor="#94DDF4",
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			label=tdna_vaf,
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			rects="1655.5,366.5,1714.5,385.5",
			width=0.81944];
		minimum_fold_change	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1719 366.5 1719 385.5 1847 385.5 1847 366.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1783 373.5 0 112 19 -minimum_fold_change ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=minimum_fold_change,
			pos="1783,376",
			rects="1719,366.5,1847,385.5",
			width=1.7778];
		exclude_nas	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1851.5 366.5 1851.5 385.5 1928.5 385.5 1928.5 366.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1890 373.5 0 61 11 -exclude_nas ",
			fillcolor="#94DDF4",
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			label=exclude_nas,
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			rects="1851.5,366.5,1928.5,385.5",
			width=1.0694];
		normal_vaf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1933 366.5 1933 385.5 2005 385.5 2005 366.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1969 373.5 0 56 10 -normal_vaf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=normal_vaf,
			pos="1969,376",
			rects="1933,366.5,2005,385.5",
			width=1];
		normal_sample_name	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 2009.5 366.5 2009.5 385.5 2134.5 385.5 2134.5 366.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2072 373.5 0 109 18 -normal_sample_name ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=normal_sample_name,
			pos="2072,376",
			rects="2009.5,366.5,2134.5,385.5",
			width=1.7361];
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			fillcolor="#94DDF4",
			height=0.27778,
			label=top_score_metric,
			pos="2189,376",
			rects="2138.5,366.5,2239.5,385.5",
			width=1.4028];
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	tumor_rna_bam_readcount	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 3042 313.5 3042 332.5 3182 332.5 3182 313.5 ",
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		fillcolor="#F3CEA1",
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		label="bam_readcount workflow",
		pos="3112,323",
		rects="3042,313.5,3182,332.5",
		width=1.9444];
	detect_variants_vcf -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 7 2941.73 366.51 2951.66 363.73 2962.79 360.67 2973 358 3004.58 349.74 3040.37 341 3067.72 334.45 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3043.5 343.6 0 13 3 -vcf ",
		label=vcf,
		lp="3043.5,345.5",
		pos="e,3075.9,332.49 2941.7,366.51 2951.7,363.73 2962.8,360.67 2973,358 3004.6,349.74 3040.4,341 3067.7,334.45"];
	add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2768.5 223.5 2768.5 242.5 2911.5 242.5 2911.5 223.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2840 230.5 0 127 26 -add expression info to vcf ",
		height=0.27778,
		label="add expression info to vcf",
		pos="2840,233",
		rects="2768.5,223.5,2911.5,242.5",
		width=1.9861];
	expression_tool -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 13 3010.39 366.59 3000.83 358.7 2985.38 347.2 2970 341 2950.34 333.08 2942.65 340.94 2923 333 2902.54 324.74 2897.09 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2849.17 248.95 2844.04 243.59 2844.7 250.97 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2914 298.6 0 64 15 -expression_tool ",
		label=expression_tool,
		lp="2914,300.5",
		pos="e,2843.4,242.21 3010.4,366.59 3000.8,358.7 2985.4,347.2 2970,341 2950.3,333.08 2942.6,340.94 2923,333 2902.5,324.74 2897.1,321.1 \
2882,305 2866.5,288.42 2854.1,265.13 2846.9,249.81"];
	add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2768.5 178.5 2768.5 197.5 2911.5 197.5 2911.5 178.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2840 185.5 0 127 26 -add expression info to vcf ",
		height=0.27778,
		label="add expression info to vcf",
		pos="2840,188",
		rects="2768.5,178.5,2911.5,197.5",
		width=1.9861];
	expression_tool -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 16 3040.99 366.52 3050.06 363.24 3060.9 359.84 3071 358 3093.32 353.93 3257.27 364.15 3275 350 3284.35 342.54 3282 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2919.54 186.39 2912.53 188.8 2919.51 191.29 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3314 276.1 0 64 15 -expression_tool ",
		label=expression_tool,
		lp="3314,278",
		pos="e,2911,188.79 3041,366.52 3050.1,363.24 3060.9,359.84 3071,358 3093.3,353.93 3257.3,364.15 3275,350 3284.4,342.54 3282,335.97 3282,\
324 3282,324 3282,324 3282,232 3282,195.98 3046.4,189.63 2919.2,188.83"];
	pvacseq	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1447 88.5 1447 107.5 1525 107.5 1525 88.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1486 95.5 0 62 11 -run pVACseq ",
		height=0.27778,
		label="run pVACseq",
		pos="1486,98",
		rects="1447,88.5,1525,107.5",
		width=1.0833];
	net_chop_threshold -> pvacseq	[_draw_="c 7 -#000000 B 10 2284.61 366.66 2270.9 357.99 2253 343.02 2253 324 2253 324 2253 324 2253 142 2253 105.75 1699.59 100.06 1532.93 \
99.17 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1533.35 96.72 1526.34 99.13 1533.33 101.62 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2293.5 231.1 0 81 18 -net_chop_threshold ",
		label=net_chop_threshold,
		lp="2293.5,233",
		pos="e,1524.8,99.124 2284.6,366.66 2270.9,357.99 2253,343.02 2253,324 2253,324 2253,324 2253,142 2253,105.75 1699.6,100.06 1532.9,99.165"];
	fasta_size -> pvacseq	[_draw_="c 7 -#000000 B 10 2382.69 366.8 2372.36 357.59 2358 341.61 2358 324 2358 324 2358 324 2358 142 2358 100.34 1714.68 98.52 1533.17 \
98.84 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1533.39 96.39 1526.39 98.85 1533.4 101.29 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2379 231.1 0 42 10 -fasta_size ",
		label=fasta_size,
		lp="2379,233",
		pos="e,1524.9,98.855 2382.7,366.8 2372.4,357.59 2358,341.61 2358,324 2358,324 2358,324 2358,142 2358,100.34 1714.7,98.522 1533.2,98.839"];
	tdna_cov -> pvacseq	[_draw_="c 7 -#000000 B 10 2456.35 366.62 2451.32 356.74 2444 339.68 2444 324 2444 324 2444 324 2444 142 2444 95.86 1725.49 97.39 1532.97 \
98.62 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1533.24 96.17 1526.25 98.67 1533.27 101.07 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2462.5 231.1 0 37 8 -tdna_cov ",
		label=tdna_cov,
		lp="2462.5,233",
		pos="e,1524.7,98.679 2456.4,366.62 2451.3,356.74 2444,339.68 2444,324 2444,324 2444,324 2444,142 2444,95.861 1725.5,97.387 1533,98.624"];
	readcount_minimum_base_quality -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 7 3104.69 366.52 3096.21 362.76 3088.51 357.46 3083 350 3079.63 345.44 3081.58 341.07 3085.73 337.27 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3118.5 343.6 0 71 16 -min_base_quality ",
		label=min_base_quality,
		lp="3118.5,345.5",
		pos="e,3092.5,332.46 3104.7,366.52 3096.2,362.76 3088.5,357.46 3083,350 3079.6,345.44 3081.6,341.07 3085.7,337.27"];
	trna_vaf -> pvacseq	[_draw_="c 7 -#000000 B 13 52.95 366.74 61.23 357.23 73 340.77 73 324 73 324 73 324 73 142 73 115.76 100.48 122.09 126 116 191.05 100.47 \
1206.28 99.11 1438.81 99.01 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1438.55 101.46 1445.55 99 1438.55 96.56 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 90 231.1 0 34 8 -trna_vaf ",
		label=trna_vaf,
		lp="90,233",
		pos="e,1447.1,99.003 52.949,366.74 61.227,357.23 73,340.77 73,324 73,324 73,324 73,142 73,115.76 100.48,122.09 126,116 191.05,100.47 \
1206.3,99.114 1438.8,99.007"];
	variants_to_table	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3641.5 88.5 3641.5 107.5 3782.5 107.5 3782.5 88.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3712 95.5 0 125 25 -SelectVariants (GATK 3.6) ",
		height=0.27778,
		label="SelectVariants (GATK 3.6)",
		pos="3712,98",
		rects="3641.5,88.5,3782.5,107.5",
		width=1.9583];
	variants_to_table_fields -> variants_to_table	[_draw_="c 7 -#000000 B 10 3987.27 366.55 3949.54 355.03 3888 334.62 3888 324 3888 324 3888 324 3888 142 3888 120.45 3837.58 109.65 3790.71 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3791.05 101.84 3783.82 103.52 3790.52 106.71 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3899.5 231.1 0 23 6 -fields ",
		label=fields,
		lp="3899.5,233",
		pos="e,3782.3,103.35 3987.3,366.55 3949.5,355.03 3888,334.62 3888,324 3888,324 3888,324 3888,142 3888,120.45 3837.6,109.65 3790.7,104.27"];
	readcount_minimum_mapping_quality -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 13 3314.82 366.5 3296.73 363.51 3275.96 360.32 3257 358 3215.38 352.9 3202.18 364.94 3163 350 3156.77 347.63 3156.76 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3142.66 333.81 3135.27 333.11 3140.61 338.27 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3206.5 343.6 0 87 19 -min_mapping_quality ",
		label=min_mapping_quality,
		lp="3206.5,345.5",
		pos="e,3133.9,332.48 3314.8,366.5 3296.7,363.51 3276,360.32 3257,358 3215.4,352.9 3202.2,364.94 3163,350 3156.8,347.63 3156.8,344.35 \
3151,341 3148,339.24 3144.8,337.56 3141.5,335.97"];
	sample_name -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 13 2704.29 366.53 2712.64 363.26 2722.64 359.86 2732 358 2808.8 342.73 2830.01 357 2908 350 2937.93 347.32 2945.2 \
344.85 2975 341 2994.24 338.51 3015.01 335.9 3034.41 333.49 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3034.49 335.95 3041.14 332.66 3033.89 331.09 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2990.5 343.6 0 31 6 -sample ",
		label=sample,
		lp="2990.5,345.5",
		pos="e,3042.6,332.47 2704.3,366.53 2712.6,363.26 2722.6,359.86 2732,358 2808.8,342.73 2830,357 2908,350 2937.9,347.32 2945.2,344.85 2975,\
341 2994.2,338.51 3015,335.9 3034.4,333.49"];
	sample_name -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 7 2690.08 366.92 2699.84 351.81 2722.43 318.74 2747 296 2768.63 275.99 2797.32 257.9 2817.08 246.5 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2818.25 248.65 2823.13 243.07 2815.83 244.39 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2776 298.6 0 58 11 -sample_name ",
		label=sample_name,
		lp="2776,300.5",
		pos="e,2824.4,242.32 2690.1,366.92 2699.8,351.81 2722.4,318.74 2747,296 2768.6,275.99 2797.3,257.9 2817.1,246.5"];
	sample_name -> pvacseq	[_draw_="c 7 -#000000 B 13 2659.68 366.6 2641.43 358.77 2620 345.09 2620 324 2620 324 2620 324 2620 142 2620 86.59 2427.31 119.42 2372 116 \
2206.53 105.76 1691.72 100.71 1533.04 99.37 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1533.41 96.93 1526.39 99.32 1533.37 101.83 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2649 231.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="2649,233",
		pos="e,1524.9,99.304 2659.7,366.6 2641.4,358.77 2620,345.09 2620,324 2620,324 2620,324 2620,142 2620,86.587 2427.3,119.42 2372,116 2206.5,\
105.76 1691.7,100.71 1533,99.372"];
	add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 2882 268.5 2882 287.5 3126 287.5 3126 268.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3004 275.5 0 228 46 -Add snv and indel bam-readcount files to a vcf ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="Add snv and indel bam-readcount files to a vcf",
		pos="3004,278",
		rects="2882,268.5,3126,287.5",
		width=3.3889];
	sample_name -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 16 2704.8 366.62 2713.07 363.45 2722.87 360.09 2732 358 2738.53 356.5 2966.49 336.81 2972 333 2980.17 327.34 2976.19 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2998.7 295.79 2999.71 288.44 2994.34 293.56 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3011 321.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="3011,323",
		pos="e,3000.4,287.1 2704.8,366.62 2713.1,363.45 2722.9,360.09 2732,358 2738.5,356.5 2966.5,336.81 2972,333 2980.2,327.34 2976.2,321.06 \
2982,313 2984.9,308.92 2987,309.03 2990,305 2992.4,301.77 2994.7,298.07 2996.6,294.49"];
	sample_name -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 10 2685 366.7 2685 356.6 2685 339.05 2685 324 2685 324 2685 324 2685 232 2685 214.4 2722.57 203.71 2760.72 197.39 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2760.82 199.85 2767.36 196.34 2760.06 195.01 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2714 276.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="2714,278",
		pos="e,2768.9,196.1 2685,366.7 2685,356.6 2685,339.05 2685,324 2685,324 2685,324 2685,232 2685,214.4 2722.6,203.71 2760.7,197.39"];
	alleles -> pvacseq	[_draw_="c 7 -#000000 B 13 107.47 366.73 113.39 356.95 122 339.98 122 324 122 324 122 324 122 142 122 97.8 174.22 122.12 218 116 340.44 98.88 \
1224.24 98.71 1439.04 98.93 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1438.78 101.38 1445.78 98.94 1438.78 96.48 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 136 231.1 0 28 7 -alleles ",
		label=alleles,
		lp="136,233",
		pos="e,1447.3,98.941 107.47,366.73 113.39,356.95 122,339.98 122,324 122,324 122,324 122,142 122,97.796 174.22,122.12 218,116 340.44,98.877 \
1224.2,98.714 1439,98.932"];
	epitope_lengths -> pvacseq	[_draw_="c 7 -#000000 B 13 189.3 366.59 200.18 357.44 215 341.72 215 324 215 324 215 324 215 142 215 87.43 280.78 122.21 335 116 445.65 103.32 \
1236.38 99.83 1438.86 99.14 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1438.71 101.59 1445.71 99.12 1438.7 96.69 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 248.5 231.1 0 67 15 -epitope_lengths ",
		label=epitope_lengths,
		lp="248.5,233",
		pos="e,1447.2,99.115 189.3,366.59 200.18,357.44 215,341.72 215,324 215,324 215,324 215,142 215,87.429 280.78,122.21 335,116 445.65,103.32 \
1236.4,99.833 1438.9,99.143"];
	expn_val -> pvacseq	[_draw_="c 7 -#000000 B 13 276.22 366.57 296.05 355.71 327 336.72 327 324 327 324 327 324 327 142 327 114.16 356.84 122.12 384 116 436.07 \
104.26 1234.83 100.07 1438.85 99.19 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1438.76 101.64 1445.75 99.16 1438.74 96.74 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 345 231.1 0 36 8 -expn_val ",
		label=expn_val,
		lp="345,233",
		pos="e,1447.3,99.152 276.22,366.57 296.05,355.71 327,336.72 327,324 327,324 327,324 327,142 327,114.16 356.84,122.12 384,116 436.07,104.26 \
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	normal_cov -> pvacseq	[_draw_="c 7 -#000000 B 13 347.98 366.58 361.95 357.95 380 343.09 380 324 380 324 380 324 380 142 380 99.94 429.39 122.18 471 116 567.2 101.7 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1438.75 101.52 1445.74 99.05 1438.74 96.62 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 403.5 231.1 0 47 10 -normal_cov ",
		label=normal_cov,
		lp="403.5,233",
		pos="e,1447.3,99.05 347.98,366.58 361.95,357.95 380,343.09 380,324 380,324 380,324 380,142 380,99.937 429.39,122.18 471,116 567.2,101.7 \
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	peptide_sequence_length -> pvacseq	[_draw_="c 7 -#000000 B 13 451.1 366.59 458.49 356.95 469 340.37 469 324 469 324 469 324 469 142 469 62.49 566.76 122.6 646 116 801.86 103.03 \
1286.03 99.86 1439.11 99.17 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1438.93 101.62 1445.92 99.14 1438.91 96.72 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 522 231.1 0 106 23 -peptide_sequence_length ",
		label=peptide_sequence_length,
		lp="522,233",
		pos="e,1447.4,99.137 451.1,366.59 458.49,356.95 469,340.37 469,324 469,324 469,324 469,142 469,62.489 566.76,122.6 646,116 801.86,103.03 \
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	gene_expression_file -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 7 2793.11 366.51 2795.19 351.83 2800.26 320.88 2809 296 2814.82 279.42 2824.09 261.58 2830.98 249.32 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2839.5 298.6 0 61 15 -expression_file ",
		label=expression_file,
		lp="2839.5,300.5",
		pos="e,2835.1,242.13 2793.1,366.51 2795.2,351.83 2800.3,320.88 2809,296 2814.8,279.42 2824.1,261.58 2831,249.32"];
	transcript_expression_file -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 10 2562.9 366.56 2558.46 356.62 2552 339.51 2552 324 2552 324 2552 324 2552 232 2552 210.84 2675.18 198.97 2760.43 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2760.47 195.73 2767.3 192.83 2760.15 190.84 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2582.5 276.1 0 61 15 -expression_file ",
		label=expression_file,
		lp="2582.5,278",
		pos="e,2768.8,192.73 2562.9,366.56 2558.5,356.62 2552,339.51 2552,324 2552,324 2552,324 2552,232 2552,210.84 2675.2,198.97 2760.4,193.28"];
	reference_fasta -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 7 3691.41 366.64 3682.51 363.38 3671.89 359.96 3662 358 3573.97 340.52 3319.53 330.4 3189.9 326.24 ",
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		label=reference_fasta,
		lp="3638.5,345.5",
		pos="e,3181.5,325.97 3691.4,366.64 3682.5,363.38 3671.9,359.96 3662,358 3574,340.52 3319.5,330.4 3189.9,326.24"];
	reference_fasta -> variants_to_table	[_draw_="c 7 -#000000 B 10 3712 366.7 3712 356.6 3712 339.05 3712 324 3712 324 3712 324 3712 142 3712 133.31 3712 123.63 3712 115.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3714.45 115.76 3712 108.76 3709.55 115.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3732 231.1 0 40 9 -reference ",
		label=reference,
		lp="3732,233",
		pos="e,3712,107.24 3712,366.7 3712,356.6 3712,339.05 3712,324 3712,324 3712,324 3712,142 3712,133.31 3712,123.63 3712,115.65"];
	net_chop_method -> pvacseq	[_draw_="c 7 -#000000 B 10 579.23 366.79 587.81 357.33 600 340.91 600 324 600 324 600 324 600 142 600 99.62 1255.11 98.33 1438.69 98.8 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1438.55 101.25 1445.56 98.82 1438.57 96.35 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 636.5 231.1 0 73 15 -net_chop_method ",
		label=net_chop_method,
		lp="636.5,233",
		pos="e,1447.1,98.824 579.23,366.79 587.81,357.33 600,340.91 600,324 600,324 600,324 600,142 600,99.625 1255.1,98.331 1438.7,98.8"];
	prediction_algorithms -> pvacseq	[_draw_="c 7 -#000000 B 10 689 366.7 689 356.6 689 339.05 689 324 689 324 689 324 689 142 689 104.23 1267.32 99.61 1438.69 99.06 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1438.51 101.52 1445.51 99.04 1438.5 96.62 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 733.5 231.1 0 89 21 -prediction_algorithms ",
		label=prediction_algorithms,
		lp="733.5,233",
		pos="e,1447,99.041 689,366.7 689,356.6 689,339.05 689,324 689,324 689,324 689,142 689,104.23 1267.3,99.605 1438.7,99.065"];
	variants_to_table_genotype_fields -> variants_to_table	[_draw_="c 7 -#000000 B 10 4135.71 366.56 4097.89 357.9 4049 343.03 4049 324 4049 324 4049 324 4049 142 4049 116.08 3890.06 105.48 3790.49 \
101.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3790.84 98.95 3783.75 101.11 3790.64 103.84 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 4082 231.1 0 66 15 -genotype_fields ",
		label=genotype_fields,
		lp="4082,233",
		pos="e,3782.2,101.05 4135.7,366.56 4097.9,357.9 4049,343.03 4049,324 4049,324 4049,324 4049,142 4049,116.08 3890.1,105.48 3790.5,101.38"];
	rnaseq_bam -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 7 3490.39 366.55 3483.02 363.36 3474.25 360.02 3466 358 3462.67 357.18 3293.42 341.12 3190.18 331.37 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3387.5 343.6 0 19 3 -bam ",
		label=bam,
		lp="3387.5,345.5",
		pos="e,3181.9,330.59 3490.4,366.55 3483,363.36 3474.3,360.02 3466,358 3462.7,357.18 3293.4,341.12 3190.2,331.37"];
	n_threads -> pvacseq	[_draw_="c 7 -#000000 B 10 799.97 366.53 811.98 357.55 828 342.18 828 324 828 324 828 324 828 142 828 111.35 1288.67 101.89 1439.1 99.61 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1438.82 102.07 1445.78 99.51 1438.75 97.17 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 848.5 231.1 0 41 9 -n_threads ",
		label=n_threads,
		lp="848.5,233",
		pos="e,1447.3,99.492 799.97,366.53 811.98,357.55 828,342.18 828,324 828,324 828,324 828,142 828,111.35 1288.7,101.89 1439.1,99.613"];
	add_vep_fields_to_table	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3296.5 35.5 3296.5 54.5 3453.5 54.5 3453.5 35.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3375 42.5 0 141 28 -add VEP annotation to report ",
		height=0.27778,
		label="add VEP annotation to report",
		pos="3375,45",
		rects="3296.5,35.5,3453.5,54.5",
		width=2.1806];
	vep_to_table_fields -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 13 3578.83 366.55 3568.88 363.62 3557.48 360.46 3547 358 3516.46 350.84 3410 355.37 3410 324 3410 324 3410 324 3410 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3393.15 58.33 3386.4 55.25 3389.76 61.86 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3431 208.6 0 42 10 -vep_fields ",
		label=vep_fields,
		lp="3431,210.5",
		pos="e,3385.3,54.202 3578.8,366.55 3568.9,363.62 3557.5,360.46 3547,358 3516.5,350.84 3410,355.37 3410,324 3410,324 3410,324 3410,97 \
3410,82.691 3400.5,69.46 3391.4,60.062"];
	maximum_transcript_support_level -> pvacseq	[_draw_="c 7 -#000000 B 10 921.36 366.78 924.03 356.76 928 339.28 928 324 928 324 928 324 928 142 928 116.45 1304.72 103.86 1439.09 100.18 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1438.76 102.64 1445.69 100 1438.63 97.74 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 999 231.1 0 142 32 -maximum_transcript_support_level ",
		label=maximum_transcript_support_level,
		lp="999,233",
		pos="e,1447.2,99.958 921.36,366.78 924.03,356.76 928,339.28 928,324 928,324 928,324 928,142 928,116.45 1304.7,103.86 1439.1,100.18"];
	netmhc_stab -> pvacseq	[_draw_="c 7 -#000000 B 10 1078.58 366.58 1094.91 358.38 1115 344.18 1115 324 1115 324 1115 324 1115 142 1115 109.75 1339.07 101.66 1438.94 \
99.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1438.88 102.1 1445.83 99.52 1438.79 97.2 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1141.5 231.1 0 53 11 -netmhc_stab ",
		label=netmhc_stab,
		lp="1141.5,233",
		pos="e,1447.3,99.489 1078.6,366.58 1094.9,358.38 1115,344.18 1115,324 1115,324 1115,324 1115,142 1115,109.75 1339.1,101.66 1438.9,99.65"];
	trna_cov -> pvacseq	[_draw_="c 7 -#000000 B 13 1149.8 366.57 1171.12 355.88 1204 337.25 1204 324 1204 324 1204 324 1204 142 1204 107.98 1242.75 123.21 1276 116 \
1331.13 104.04 1396.05 100.32 1438.95 99.25 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1438.77 101.71 1445.72 99.11 1438.67 96.81 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1221.5 231.1 0 35 8 -trna_cov ",
		label=trna_cov,
		lp="1221.5,233",
		pos="e,1447.2,99.073 1149.8,366.57 1171.1,355.88 1204,337.25 1204,324 1204,324 1204,324 1204,142 1204,107.98 1242.8,123.21 1276,116 1331.1,\
104.04 1396,100.32 1439,99.253"];
	downstream_sequence_length -> pvacseq	[_draw_="c 7 -#000000 B 10 1252.92 366.66 1258.25 356.81 1266 339.77 1266 324 1266 324 1266 324 1266 142 1266 107.08 1374.09 99.99 1438.74 \
98.87 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1438.7 101.32 1445.66 98.77 1438.63 96.42 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1329 231.1 0 126 26 -downstream_sequence_length ",
		label=downstream_sequence_length,
		lp="1329,233",
		pos="e,1447.2,98.752 1252.9,366.66 1258.2,356.81 1266,339.77 1266,324 1266,324 1266,324 1266,142 1266,107.08 1374.1,99.989 1438.7,98.869"];
	phased_proximal_variants_vcf -> pvacseq	[_draw_="c 7 -#000000 B 10 1418.53 366.7 1419.12 356.61 1420 339.06 1420 324 1420 324 1420 324 1420 142 1420 127.23 1431.75 117.27 1445.33 \
110.69 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1446.16 113 1451.61 107.97 1444.21 108.5 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1481 231.1 0 122 28 -phased_proximal_variants_vcf ",
		label=phased_proximal_variants_vcf,
		lp="1481,233",
		pos="e,1453,107.37 1418.5,366.7 1419.1,356.61 1420,339.06 1420,324 1420,324 1420,324 1420,142 1420,127.23 1431.7,117.27 1445.3,110.69"];
	additional_report_columns -> pvacseq	[_draw_="c 7 -#000000 B 10 1570.9 366.59 1563.51 356.95 1553 340.37 1553 324 1553 324 1553 324 1553 142 1553 127.19 1541.26 117.24 1527.61 \
110.69 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1528.68 108.48 1521.28 107.98 1526.75 112.98 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1607.5 231.1 0 109 25 -additional_report_columns ",
		label=additional_report_columns,
		lp="1607.5,233",
		pos="e,1519.9,107.38 1570.9,366.59 1563.5,356.95 1553,340.37 1553,324 1553,324 1553,324 1553,142 1553,127.19 1541.3,117.24 1527.6,110.69"];
	tdna_vaf -> pvacseq	[_draw_="c 7 -#000000 B 10 1682.37 366.79 1679.41 356.8 1675 339.34 1675 324 1675 324 1675 324 1675 142 1675 112.95 1589.05 103.53 1533.07 \
100.47 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1533.33 98.03 1526.21 100.12 1533.08 102.92 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1693 231.1 0 36 8 -tdna_vaf ",
		label=tdna_vaf,
		lp="1693,233",
		pos="e,1524.7,100.05 1682.4,366.79 1679.4,356.8 1675,339.34 1675,324 1675,324 1675,324 1675,142 1675,112.95 1589,103.53 1533.1,100.47"];
	minimum_fold_change -> pvacseq	[_draw_="c 7 -#000000 B 10 1773.57 366.62 1764.13 357.25 1751 341.14 1751 324 1751 324 1751 324 1751 142 1751 120.16 1608.96 107.25 1532.86 \
101.9 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1533.48 99.49 1526.33 101.45 1533.14 104.38 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1797 231.1 0 92 19 -minimum_fold_change ",
		label=minimum_fold_change,
		lp="1797,233",
		pos="e,1524.8,101.35 1773.6,366.62 1764.1,357.25 1751,341.14 1751,324 1751,324 1751,324 1751,142 1751,120.16 1609,107.25 1532.9,101.9"];
	exclude_nas -> pvacseq	[_draw_="c 7 -#000000 B 10 1884.81 366.69 1879.18 356.88 1871 339.87 1871 324 1871 324 1871 324 1871 142 1871 108.35 1635.72 101.03 1533.02 \
99.44 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1533.23 97 1526.19 99.34 1533.16 101.89 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1896.5 231.1 0 51 11 -exclude_nas ",
		label=exclude_nas,
		lp="1896.5,233",
		pos="e,1524.7,99.321 1884.8,366.69 1879.2,356.88 1871,339.87 1871,324 1871,324 1871,324 1871,142 1871,108.35 1635.7,101.03 1533,99.442"];
	normal_vaf -> pvacseq	[_draw_="c 7 -#000000 B 10 1963.81 366.69 1958.18 356.88 1950 339.87 1950 324 1950 324 1950 324 1950 142 1950 100.42 1650.81 97.89 1532.93 \
98.51 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1533.26 96.06 1526.28 98.55 1533.29 100.96 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1973 231.1 0 46 10 -normal_vaf ",
		label=normal_vaf,
		lp="1973,233",
		pos="e,1524.8,98.558 1963.8,366.69 1958.2,356.88 1950,339.87 1950,324 1950,324 1950,324 1950,142 1950,100.42 1650.8,97.892 1532.9,98.508"];
	normal_sample_name -> pvacseq	[_draw_="c 7 -#000000 B 13 2058.08 366.76 2045.19 357.95 2028 342.71 2028 324 2028 324 2028 324 2028 142 2028 91.33 1967.21 122.81 1917 116 \
1844.07 106.11 1629.03 101.39 1533.11 99.72 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1533.31 97.28 1526.27 99.61 1533.23 102.18 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2073 231.1 0 90 18 -normal_sample_name ",
		label=normal_sample_name,
		lp="2073,233",
		pos="e,1524.8,99.582 2058.1,366.76 2045.2,357.95 2028,342.71 2028,324 2028,324 2028,324 2028,142 2028,91.331 1967.2,122.81 1917,116 1844.1,\
106.11 1629,101.39 1533.1,99.725"];
	top_score_metric -> pvacseq	[_draw_="c 7 -#000000 B 10 2176.03 366.53 2164.02 357.55 2148 342.18 2148 324 2148 324 2148 324 2148 142 2148 111.16 1684.53 101.83 1533.18 \
99.6 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1533.49 97.15 1526.45 99.5 1533.42 102.05 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2183 231.1 0 70 16 -top_score_metric ",
		label=top_score_metric,
		lp="2183,233",
		pos="e,1524.9,99.48 2176,366.53 2164,357.55 2148,342.18 2148,324 2148,324 2148,324 2148,142 2148,111.16 1684.5,101.83 1533.2,99.598"];
	index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3321 133.5 3321 152.5 3383 152.5 3383 133.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3352 140.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="3352,143",
		rects="3321,133.5,3383,152.5",
		width=0.86111];
	index -> variants_to_table	[_draw_="c 7 -#000000 B 4 3382.69 138.33 3437.65 131.77 3554.46 117.82 3633.12 108.42 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3633.4 110.86 3640.06 107.59 3632.82 105.99 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3570.5 118.6 0 13 3 -vcf ",
		label=vcf,
		lp="3570.5,120.5",
		pos="e,3641.6,107.41 3382.7,138.33 3437.7,131.77 3554.5,117.82 3633.1,108.42"];
	index -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 4 3353.96 133.82 3357.73 118.09 3366.04 83.4 3371.01 62.63 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3373.38 63.29 3372.63 55.91 3368.61 62.15 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3370.5 96.1 0 13 3 -vcf ",
		label=vcf,
		lp="3370.5,98",
		pos="e,3373,54.438 3354,133.82 3357.7,118.09 3366,83.4 3371,62.635"];
	index -> pvacseq	[_draw_="c 7 -#000000 B 7 3321.14 140.67 3220.73 136.39 2894.24 122.84 2624 116 2200.89 105.29 1689.12 100.6 1533.27 99.35 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1533.35 96.91 1526.33 99.3 1533.31 101.81 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2922.5 118.6 0 37 9 -input_vcf ",
		label=input_vcf,
		lp="2922.5,120.5",
		pos="e,1524.8,99.288 3321.1,140.67 3220.7,136.39 2894.2,122.84 2624,116 2200.9,105.29 1689.1,100.6 1533.3,99.355"];
	tumor_rna_bam_readcount -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 3047.8 313.51 3030.76 310.74 3016.17 307.69 3013 305 3010.09 302.53 3008.12 299.07 3006.79 295.48 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3009.17 294.91 3005.06 288.73 3004.42 296.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3019.5 298.6 0 13 3 -vcf ",
		label=vcf,
		lp="3019.5,300.5",
		pos="e,3004.7,287.26 3047.8,313.51 3030.8,310.74 3016.2,307.69 3013,305 3010.1,302.53 3008.1,299.07 3006.8,295.48"];
	tumor_rna_bam_readcount -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 3057.85 313.52 3049.97 311.3 3042.12 308.51 3035 305 3033.12 304.07 3026.24 298.35 3019.45 292.51 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3021.41 290.97 3014.51 288.24 3018.2 294.67 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3084 298.6 0 98 21 -snv_bam_readcount_tsv ",
		label=snv_bam_readcount_tsv,
		lp="3084,300.5",
		pos="e,3013.4,287.25 3057.8,313.52 3050,311.3 3042.1,308.51 3035,305 3033.1,304.07 3026.2,298.35 3019.4,292.51"];
	tumor_rna_bam_readcount -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 3123.67 313.69 3129.68 308.4 3134.84 301.54 3130 296 3128.19 293.93 3125.53 292.1 3122.22 290.48 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3123.36 288.3 3115.95 288.02 3121.57 292.86 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3183 298.6 0 104 23 -indel_bam_readcount_tsv ",
		label=indel_bam_readcount_tsv,
		lp="3183,300.5",
		pos="e,3114.5,287.46 3123.7,313.69 3129.7,308.4 3134.8,301.54 3130,296 3128.2,293.93 3125.5,292.1 3122.2,290.48"];
	add_gene_expression_data_to_vcf -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 4 2840 223.71 2840 218.59 2840 211.85 2840 205.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2842.45 205.78 2840 198.78 2837.55 205.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2846.5 208.6 0 13 3 -vcf ",
		label=vcf,
		lp="2846.5,210.5",
		pos="e,2840,197.27 2840,223.71 2840,218.59 2840,211.85 2840,205.67"];
	variants_to_table -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 4 3655.97 88.52 3596.33 79.49 3502.07 65.23 3439.41 55.75 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3439.95 53.35 3432.66 54.73 3439.21 58.2 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3599.5 73.6 0 13 3 -tsv ",
		label=tsv,
		lp="3599.5,75.5",
		pos="e,3431.2,54.499 3656,88.521 3596.3,79.494 3502.1,65.231 3439.4,55.747"];
	add_vep_fields_to_table -> annotated_tsv;
	pvacseq -> mhc_i_filtered_epitopes	[_draw_="c 7 -#000000 B 4 1465.19 88.58 1444.31 80.13 1411.98 67.04 1388.67 57.61 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1389.65 55.36 1382.24 55 1387.81 59.9 ",
		pos="e,1380.8,54.434 1465.2,88.578 1444.3,80.126 1412,67.039 1388.7,57.605"];
	pvacseq -> mhc_i_all_epitopes	[_draw_="c 7 -#000000 B 4 1486 88.58 1486 81.52 1486 71.24 1486 62.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1488.45 62.78 1486 55.78 1483.55 62.78 ",
		pos="e,1486,54.265 1486,88.578 1486,81.523 1486,71.24 1486,62.547"];
	pvacseq -> combined_filtered_epitopes	[_draw_="c 7 -#000000 B 4 1508.29 88.58 1530.86 80.05 1565.91 66.81 1590.93 57.36 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1591.58 59.73 1597.26 54.97 1589.84 55.15 ",
		pos="e,1598.7,54.434 1508.3,88.578 1530.9,80.052 1565.9,66.81 1590.9,57.359"];
	pvacseq -> mhc_i_ranked_epitopes	[_draw_="c 7 -#000000 B 7 1524.86 91.75 1567.51 85.76 1637.91 75.2 1698 63 1707.44 61.08 1717.55 58.75 1727.03 56.44 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1727.5 58.85 1733.71 54.79 1726.32 54.09 ",
		pos="e,1735.2,54.423 1524.9,91.75 1567.5,85.76 1637.9,75.2 1698,63 1707.4,61.083 1717.6,58.752 1727,56.44"];
	pvacseq -> mhc_ii_filtered_epitopes	[_draw_="c 7 -#000000 B 7 1524.99 94.89 1589.44 91.02 1722.09 81.44 1833 63 1843.5 61.25 1854.74 58.86 1865.15 56.42 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1865.58 58.83 1871.81 54.81 1864.44 54.07 ",
		pos="e,1873.3,54.458 1525,94.891 1589.4,91.022 1722.1,81.442 1833,63 1843.5,61.255 1854.7,58.858 1865.1,56.415"];
	pvacseq -> combined_all_epitopes	[_draw_="c 7 -#000000 B 7 1524.86 96.67 1607.87 95.44 1808.41 89.7 1974 63 1984.04 61.38 1994.78 59.01 2004.68 56.54 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2005.13 58.96 2011.31 54.84 2003.92 54.21 ",
		pos="e,2012.8,54.467 1524.9,96.668 1607.9,95.439 1808.4,89.7 1974,63 1984,61.381 1994.8,59.006 2004.7,56.543"];
	pvacseq -> mhc_ii_all_epitopes	[_draw_="c 7 -#000000 B 7 1524.74 96.1 1642.38 93.17 1994.3 82.94 2107 63 2115.73 61.46 2125 59.16 2133.59 56.76 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2134.08 59.16 2140.12 54.86 2132.71 54.46 ",
		pos="e,2141.6,54.434 1524.7,96.099 1642.4,93.171 1994.3,82.938 2107,63 2115.7,61.456 2125,59.162 2133.6,56.755"];
	pvacseq -> combined_ranked_epitopes	[_draw_="c 7 -#000000 B 7 1447.09 94.39 1385.05 89.92 1259.98 79.64 1155 63 1143.4 61.16 1130.95 58.71 1119.43 56.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1120.08 53.87 1112.72 54.77 1119.03 58.66 ",
		pos="e,1111.2,54.447 1447.1,94.392 1385,89.922 1260,79.636 1155,63 1143.4,61.162 1130.9,58.71 1119.4,56.24"];
	pvacseq -> mhc_ii_ranked_epitopes	[_draw_="c 7 -#000000 B 7 1447.05 90.85 1407.98 84.51 1346.13 74.03 1293 63 1283.5 61.03 1273.33 58.71 1263.74 56.44 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1264.35 54.07 1256.97 54.81 1263.2 58.83 ",
		pos="e,1255.5,54.461 1447.1,90.851 1408,84.514 1346.1,74.031 1293,63 1283.5,61.027 1273.3,58.714 1263.7,56.44"];
	add_tumor_rna_bam_readcount_to_vcf -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 4 2971.6 268.5 2945.43 261.64 2908.47 251.95 2880.37 244.59 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2881.19 242.27 2873.8 242.86 2879.95 247.01 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2942.5 253.6 0 13 3 -vcf ",
		label=vcf,
		lp="2942.5,255.5",
		pos="e,2872.3,242.48 2971.6,268.5 2945.4,261.64 2908.5,251.95 2880.4,244.59"];
	add_transcript_expression_data_to_vcf -> annotated_vcf	[_draw_="c 7 -#000000 B 10 2817.93 178.55 2779.18 163.99 2696.19 134.01 2624 116 2490.08 82.58 2451.41 98.39 2318 63 2312 61.41 2305.69 59.38 \
2299.7 57.28 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2300.65 55.02 2293.23 54.93 2298.97 59.62 ",
		pos="e,2291.8,54.416 2817.9,178.55 2779.2,163.99 2696.2,134.01 2624,116 2490.1,82.583 2451.4,98.388 2318,63 2312,61.409 2305.7,59.381 \
2299.7,57.284"];
	add_transcript_expression_data_to_vcf -> index	[_draw_="c 7 -#000000 B 4 2911.46 181 3021 171.8 3226.73 154.52 3312.69 147.3 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3312.84 149.75 3319.61 146.72 3312.43 144.87 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3147.5 163.6 0 13 3 -vcf ",
		label=vcf,
		lp="3147.5,165.5",
		pos="e,3321.1,146.59 2911.5,181 3021,171.8 3226.7,154.52 3312.7,147.3"];
	default1	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 3130 268.5 3130 287.5 3180 287.5 3180 268.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3155 275.5 0 34 6 -\"gene\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"gene\"",
		pos="3155,278",
		rects="3130,268.5,3180,287.5",
		width=0.69444];
	default1 -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 7 3130.08 268.95 3128.71 268.61 3127.34 268.29 3126 268 3125.36 267.86 3003.93 253.45 2919.53 243.43 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2919.96 241.02 2912.72 242.63 2919.39 245.88 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3076.5 253.6 0 41 9 -data_type ",
		label=data_type,
		lp="3076.5,255.5",
		pos="e,2911.2,242.45 3130.1,268.95 3128.7,268.61 3127.3,268.29 3126,268 3125.4,267.86 3003.9,253.45 2919.5,243.43"];
	default2	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 2924.5 313.5 2924.5 332.5 2971.5 332.5 2971.5 313.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2948 320.5 0 31 5 -\"RNA\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"RNA\"",
		pos="2948,323",
		rects="2924.5,313.5,2971.5,332.5",
		width=0.65278];
	default2 -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 2947.17 313.83 2947.05 308.19 2947.86 300.87 2952 296 2953.22 294.56 2954.57 293.24 2956.02 292.03 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2957.19 294.19 2961.64 288.25 2954.46 290.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2972.5 298.6 0 41 9 -data_type ",
		label=data_type,
		lp="2972.5,300.5",
		pos="e,2962.9,287.41 2947.2,313.83 2947.1,308.19 2947.9,300.87 2952,296 2953.2,294.56 2954.6,293.24 2956,292.03"];
	default3	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 2916 223.5 2916 242.5 2988 242.5 2988 223.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2952 230.5 0 56 12 -\"transcript\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"transcript\"",
		pos="2952,233",
		rects="2916,223.5,2988,242.5",
		width=1];
	default3 -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 4 2929.87 223.5 2912.69 216.91 2888.7 207.7 2869.82 200.45 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2870.91 198.24 2863.49 198.02 2869.15 202.82 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2926.5 208.6 0 41 9 -data_type ",
		label=data_type,
		lp="2926.5,210.5",
		pos="e,2862.1,197.48 2929.9,223.5 2912.7,216.91 2888.7,207.7 2869.8,200.45"];
}