digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 413 808 413 808 0 ",
		bb="0,0,808,413",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
	];
	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 350 8 405 800 405 800 350 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 393 0 84 15 -Workflow Inputs ",
			bb="8,350,800,405",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,395.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		output_name	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16.5 358.5 16.5 377.5 97.5 377.5 97.5 358.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 57 365.5 0 65 11 -output_name ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=output_name,
			pos="57,368",
			rects="16.5,358.5,97.5,377.5",
			width=1.125];
		normal_bam	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 102 358.5 102 377.5 180 377.5 180 358.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 141 365.5 0 62 10 -normal_bam ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=normal_bam,
			pos="141,368",
			rects="102,358.5,180,377.5",
			width=1.0833];
		insert_size	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 184.5 358.5 184.5 377.5 253.5 377.5 253.5 358.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 219 365.5 0 53 11 -insert_size ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=insert_size,
			pos="219,368",
			rects="184.5,358.5,253.5,377.5",
			width=0.95833];
		tumor_sample_name	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 258 358.5 258 377.5 378 377.5 378 358.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 318 365.5 0 104 17 -tumor_sample_name ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=tumor_sample_name,
			pos="318,368",
			rects="258,358.5,378,377.5",
			width=1.6667];
		normal_sample_name	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 382.5 358.5 382.5 377.5 507.5 377.5 507.5 358.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 445 365.5 0 109 18 -normal_sample_name ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=normal_sample_name,
			pos="445,368",
			rects="382.5,358.5,507.5,377.5",
			width=1.7361];
		ref_name	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 728.5 358.5 728.5 377.5 791.5 377.5 791.5 358.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 760 365.5 0 47 8 -ref_name ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=ref_name,
			pos="760,368",
			rects="728.5,358.5,791.5,377.5",
			width=0.875];
		reference	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 584.5 358.5 584.5 377.5 647.5 377.5 647.5 358.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 616 365.5 0 47 9 -reference ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=reference,
			pos="616,368",
			rects="584.5,358.5,647.5,377.5",
			width=0.875];
		region_file	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 512 358.5 512 377.5 580 377.5 580 358.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 546 365.5 0 52 11 -region_file ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=region_file,
			pos="546,368",
			rects="512,358.5,580,377.5",
			width=0.94444];
		tumor_bam	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 651.5 358.5 651.5 377.5 724.5 377.5 724.5 358.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 688 365.5 0 57 9 -tumor_bam ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=tumor_bam,
			pos="688,368",
			rects="651.5,358.5,724.5,377.5",
			width=1.0139];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 553 8 553 63 673 63 673 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 607 15 0 92 16 -Workflow Outputs ",
			bb="553,8,673,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="607,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		pindel_region_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 561.5 35.5 561.5 54.5 664.5 54.5 664.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 613 42.5 0 87 17 -pindel_region_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=pindel_region_vcf,
			pos="613,45",
			rects="561.5,35.5,664.5,54.5",
			width=1.4306];
	}
	pindel2vcf	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 567 215.5 567 234.5 659 234.5 659 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 613 222.5 0 76 15 -pindel v0.2.5b8 ",
		height=0.27778,
		label="pindel v0.2.5b8",
		pos="613,225",
		rects="567,215.5,659,234.5",
		width=1.2778];
	output_name -> pindel2vcf	[_draw_="c 7 -#000000 B 10 78.43 358.55 85.59 355.78 93.62 352.71 101 350 179.64 321.12 198.03 309.48 279 288 376.31 262.18 492.35 243.23 \
558.87 233.46 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 559.06 235.91 565.64 232.48 558.36 231.06 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 306.5 290.6 0 55 11 -output_name ",
		label=output_name,
		lp="306.5,292.5",
		pos="e,567.13,232.26 78.43,358.55 85.588,355.78 93.62,352.71 101,350 179.64,321.12 198.03,309.48 279,288 376.31,262.18 492.35,243.23 \
558.87,233.46"];
	pindel_region	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 390 305.5 390 324.5 482 324.5 482 305.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 436 312.5 0 76 15 -pindel v0.2.5b8 ",
		height=0.27778,
		label="pindel v0.2.5b8",
		pos="436,315",
		rects="390,305.5,482,324.5",
		width=1.2778];
	normal_bam -> pindel_region	[_draw_="c 7 -#000000 B 7 154.76 358.63 168.84 350.52 191.62 338.66 213 333 243.7 324.88 326.24 320.19 381.82 317.87 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 381.75 320.33 388.64 317.59 381.55 315.43 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 238.5 335.6 0 51 10 -normal_bam ",
		label=normal_bam,
		lp="238.5,337.5",
		pos="e,390.15,317.53 154.76,358.63 168.84,350.52 191.62,338.66 213,333 243.7,324.88 326.24,320.19 381.82,317.87"];
	insert_size -> pindel_region	[_draw_="c 7 -#000000 B 7 233.13 358.5 247.07 350.54 269.25 338.99 290 333 319.66 324.43 353.89 320.16 381.75 318.05 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 381.86 320.5 388.67 317.56 381.52 315.61 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 312 335.6 0 44 11 -insert_size ",
		label=insert_size,
		lp="312,337.5",
		pos="e,390.18,317.46 233.13,358.5 247.07,350.54 269.25,338.99 290,333 319.66,324.43 353.89,320.16 381.75,318.05"];
	tumor_sample_name -> pindel_region	[_draw_="c 7 -#000000 B 7 322.6 358.57 327.37 350.66 335.6 339.15 346 333 356.89 326.56 369.7 322.48 382.2 319.91 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 382.39 322.37 388.85 318.71 381.52 317.55 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 388.5 335.6 0 85 17 -tumor_sample_name ",
		label=tumor_sample_name,
		lp="388.5,337.5",
		pos="e,390.33,318.44 322.6,358.57 327.37,350.66 335.6,339.15 346,333 356.89,326.56 369.7,322.48 382.2,319.91"];
	normal_sample_name -> pindel_region	[_draw_="c 7 -#000000 B 7 439.78 358.56 437.18 353.87 434.32 347.82 433 342 432.31 338.98 432.2 335.73 432.41 332.59 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 434.82 333.05 433.41 325.77 429.97 332.34 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 478 335.6 0 90 18 -normal_sample_name ",
		label=normal_sample_name,
		lp="478,337.5",
		pos="e,433.63,324.27 439.78,358.56 437.18,353.87 434.32,347.82 433,342 432.31,338.98 432.2,335.73 432.41,332.59"];
	ref_name -> pindel2vcf	[_draw_="c 7 -#000000 B 4 751.24 358.6 726.78 335.13 657.51 268.69 627.34 239.75 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 629.37 238.3 622.62 235.23 625.97 241.84 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 705.5 290.6 0 39 8 -ref_name ",
		label=ref_name,
		lp="705.5,292.5",
		pos="e,621.53,234.18 751.24,358.6 726.78,335.13 657.51,268.69 627.34,239.75"];
	reference -> pindel2vcf	[_draw_="c 7 -#000000 B 10 618.08 358.73 619.19 353.89 620.44 347.64 621 342 621.39 338.02 621.15 337 621 333 619.81 301.04 616.62 263.82 \
614.64 242.77 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 617.08 242.55 613.98 235.82 612.21 243.02 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 639 290.6 0 40 9 -reference ",
		label=reference,
		lp="639,292.5",
		pos="e,613.83,234.31 618.08,358.73 619.19,353.89 620.44,347.64 621,342 621.39,338.02 621.15,337 621,333 619.81,301.04 616.62,263.82 614.64,\
242.77"];
	reference -> pindel_region	[_draw_="c 7 -#000000 B 7 605.21 358.55 592.49 348.61 572.96 333.4 572 333 546.41 322.45 515.98 317.97 490.41 316.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 490.58 313.79 483.45 315.83 490.3 318.68 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 603 335.6 0 40 9 -reference ",
		label=reference,
		lp="603,337.5",
		pos="e,481.94,315.75 605.21,358.55 592.49,348.61 572.96,333.4 572,333 546.41,322.45 515.98,317.97 490.41,316.24"];
	region_file -> pindel_region	[_draw_="c 7 -#000000 B 7 541.86 358.6 537.53 350.72 529.95 339.22 520 333 510.95 327.34 500.38 323.52 489.85 320.95 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 490.67 318.62 483.31 319.54 489.64 323.41 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 550.5 335.6 0 43 11 -region_file ",
		label=region_file,
		lp="550.5,337.5",
		pos="e,481.83,319.22 541.86,358.6 537.53,350.72 529.95,339.22 520,333 510.95,327.34 500.38,323.52 489.85,320.95"];
	tumor_bam -> pindel_region	[_draw_="c 7 -#000000 B 7 675.89 358.66 663.47 350.59 643.29 338.74 624 333 580.2 319.96 528.33 316.09 490.18 315.26 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 490.32 312.81 483.28 315.14 490.24 317.71 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 669 335.6 0 46 9 -tumor_bam ",
		label=tumor_bam,
		lp="669,337.5",
		pos="e,481.77,315.12 675.89,358.66 663.47,350.59 643.29,338.74 624,333 580.2,319.96 528.33,316.09 490.18,315.26"];
	fix_vcf_header	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 571.5 170.5 571.5 189.5 654.5 189.5 654.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 613 177.5 0 67 14 -fix vcf header ",
		height=0.27778,
		label="fix vcf header",
		pos="613,180",
		rects="571.5,170.5,654.5,189.5",
		width=1.1528];
	remove_end_tags	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 548.5 125.5 548.5 144.5 677.5 144.5 677.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 613 132.5 0 113 20 -remove END INFO tags ",
		height=0.27778,
		label="remove END INFO tags",
		pos="613,135",
		rects="548.5,125.5,677.5,144.5",
		width=1.7917];
	fix_vcf_header -> remove_end_tags	[_draw_="c 7 -#000000 B 4 613 170.71 613 165.59 613 158.85 613 152.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 615.45 152.78 613 145.78 610.55 152.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 619.5 155.6 0 13 3 -vcf ",
		label=vcf,
		lp="619.5,157.5",
		pos="e,613,144.27 613,170.71 613,165.59 613,158.85 613,152.67"];
	index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 582 80.5 582 99.5 644 99.5 644 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 613 87.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="613,90",
		rects="582,80.5,644,99.5",
		width=0.86111];
	remove_end_tags -> index	[_draw_="c 7 -#000000 B 4 613 125.71 613 120.59 613 113.85 613 107.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 615.45 107.78 613 100.78 610.55 107.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 619.5 110.6 0 13 3 -vcf ",
		label=vcf,
		lp="619.5,112.5",
		pos="e,613,99.265 613,125.71 613,120.59 613,113.85 613,107.67"];
	pindel2vcf -> fix_vcf_header	[_draw_="c 7 -#000000 B 4 613 215.71 613 210.59 613 203.85 613 197.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 615.45 197.78 613 190.78 610.55 197.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 619.5 200.6 0 13 3 -vcf ",
		label=vcf,
		lp="619.5,202.5",
		pos="e,613,189.27 613,215.71 613,210.59 613,203.85 613,197.67"];
	cat	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 455 260.5 455 279.5 487 279.5 487 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 471 267.5 0 16 3 -cat ",
		height=0.27778,
		label=cat,
		pos="471,270",
		rects="455,260.5,487,279.5",
		width=0.44444];
	cat -> pindel2vcf	[_draw_="c 7 -#000000 B 4 486.74 264.23 508.39 257.68 547.98 245.69 577.07 236.88 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 577.54 239.3 583.53 234.92 576.12 234.61 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 575.5 245.6 0 43 10 -pindel_out ",
		label=pindel_out,
		lp="575.5,247.5",
		pos="e,584.98,234.49 486.74,264.23 508.39,257.68 547.98,245.69 577.07,236.88"];
	pindel_region -> cat	[_draw_="c 7 -#000000 B 7 441.31 305.53 444.72 300.3 449.36 293.56 454 288 454.69 287.17 455.42 286.34 456.16 285.5 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 457.92 287.21 460.99 280.46 454.38 283.82 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 478 290.6 0 48 11 -pindel_outs ",
		label=pindel_outs,
		lp="478,292.5",
		pos="e,462.04,279.36 441.31,305.53 444.72,300.3 449.36,293.56 454,288 454.69,287.17 455.42,286.34 456.16,285.5"];
	pindel_region -> cat	[_draw_="c 7 -#000000 B 7 481.72 309.37 488.45 306.7 494.59 302.76 499 297 503.09 291.66 499.55 286.48 493.79 282.16 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 495.43 280.29 488.19 278.65 492.82 284.45 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 524 290.6 0 48 11 -pindel_outs ",
		label=pindel_outs,
		lp="524,292.5",
		pos="e,486.91,277.85 481.72,309.37 488.45,306.7 494.59,302.76 499,297 503.09,291.66 499.55,286.48 493.79,282.16"];
	pindel_region -> cat	[_draw_="c 7 -#000000 B 7 481.71 313.02 509.09 311.35 540.23 307.19 549 297 565.12 278.27 523.78 272.98 495.32 271.52 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 495.58 269.08 488.48 271.24 495.38 273.98 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 576 290.6 0 48 11 -pindel_outs ",
		label=pindel_outs,
		lp="576,292.5",
		pos="e,486.97,271.18 481.71,313.02 509.09,311.35 540.23,307.19 549,297 565.12,278.27 523.78,272.98 495.32,271.52"];
	pindel_region -> cat	[_draw_="c 7 -#000000 B 7 390.15 314.27 357.85 312.89 323.13 307.2 340 288 353.62 272.5 412.8 270.39 446.78 270.51 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 446.69 272.95 453.72 270.57 446.74 268.05 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 364 290.6 0 48 11 -pindel_outs ",
		label=pindel_outs,
		lp="364,292.5",
		pos="e,455.23,270.58 390.15,314.27 357.85,312.89 323.13,307.2 340,288 353.62,272.5 412.8,270.39 446.78,270.51"];
	pindel_region -> cat	[_draw_="c 7 -#000000 B 7 409.16 305.69 399.5 301.28 392.23 295.26 398 288 404.07 280.36 428.1 275.83 446.95 273.4 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 447 275.86 453.66 272.6 446.42 270.99 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 422 290.6 0 48 11 -pindel_outs ",
		label=pindel_outs,
		lp="422,292.5",
		pos="e,455.16,272.42 409.16,305.69 399.5,301.28 392.23,295.26 398,288 404.07,280.36 428.1,275.83 446.95,273.4"];
	index -> pindel_region_vcf	[_draw_="c 7 -#000000 B 4 613 80.71 613 75.59 613 68.85 613 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 615.45 62.78 613 55.78 610.55 62.78 ",
		pos="e,613,54.265 613,80.709 613,75.593 613,68.848 613,62.666"];
}