digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 548 748 548 748 0 ",
		bb="0,0,748,548",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
	];
	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 485 8 540 740 540 740 485 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 528 0 84 15 -Workflow Inputs ",
			bb="8,485,740,540",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,530.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		insert_size	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 93.5 493.5 93.5 512.5 162.5 512.5 162.5 493.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 128 500.5 0 53 11 -insert_size ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=insert_size,
			pos="128,503",
			rects="93.5,493.5,162.5,512.5",
			width=0.95833];
		reference	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 668.5 493.5 668.5 512.5 731.5 512.5 731.5 493.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 700 500.5 0 47 9 -reference ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=reference,
			pos="700,503",
			rects="668.5,493.5,731.5,512.5",
			width=0.875];
		tumor_sample_name	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 415 493.5 415 512.5 535 512.5 535 493.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 475 500.5 0 104 17 -tumor_sample_name ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=tumor_sample_name,
			pos="475,503",
			rects="415,493.5,535,512.5",
			width=1.6667];
		tumor_bam	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16.5 493.5 16.5 512.5 89.5 512.5 89.5 493.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 53 500.5 0 57 9 -tumor_bam ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=tumor_bam,
			pos="53,503",
			rects="16.5,493.5,89.5,512.5",
			width=1.0139];
		normal_bam	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 167 493.5 167 512.5 245 512.5 245 493.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 206 500.5 0 62 10 -normal_bam ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=normal_bam,
			pos="206,503",
			rects="167,493.5,245,512.5",
			width=1.0833];
		scatter_count	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 327.5 493.5 327.5 512.5 410.5 512.5 410.5 493.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 369 500.5 0 67 13 -scatter_count ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=scatter_count,
			pos="369,503",
			rects="327.5,493.5,410.5,512.5",
			width=1.1528];
		normal_sample_name	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 539.5 493.5 539.5 512.5 664.5 512.5 664.5 493.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 602 500.5 0 109 18 -normal_sample_name ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=normal_sample_name,
			pos="602,503",
			rects="539.5,493.5,664.5,512.5",
			width=1.7361];
		interval_list	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 249 493.5 249 512.5 323 512.5 323 493.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 286 500.5 0 58 13 -interval_list ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=interval_list,
			pos="286,503",
			rects="249,493.5,323,512.5",
			width=1.0278];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 533 8 533 63 708 63 708 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 587 15 0 92 16 -Workflow Outputs ",
			bb="533,8,708,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="587,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		unfiltered_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 541.5 35.5 541.5 54.5 624.5 54.5 624.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 583 42.5 0 67 14 -unfiltered_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=unfiltered_vcf,
			pos="583,45",
			rects="541.5,35.5,624.5,54.5",
			width=1.1528];
		filtered_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 628.5 35.5 628.5 54.5 699.5 54.5 699.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 664 42.5 0 55 12 -filtered_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=filtered_vcf,
			pos="664,45",
			rects="628.5,35.5,699.5,54.5",
			width=0.98611];
	}
	pindel_cat	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 328 395.5 328 414.5 428 414.5 428 395.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 378 402.5 0 84 17 -Per-region pindel ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="Per-region pindel",
		pos="378,405",
		rects="328,395.5,428,414.5",
		width=1.3889];
	insert_size -> pindel_cat	[_draw_="c 7 -#000000 B 7 129.92 493.78 133.47 480.41 142.39 454.05 160 440 184.07 420.8 263.87 412.31 319.91 408.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 320 411.1 326.84 408.21 319.7 406.2 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 182 448.1 0 44 11 -insert_size ",
		label=insert_size,
		lp="182,450",
		pos="e,328.35,408.12 129.92,493.78 133.47,480.41 142.39,454.05 160,440 184.07,420.8 263.87,412.31 319.91,408.65"];
	somaticfilter	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 558.5 305.5 558.5 324.5 687.5 324.5 687.5 305.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 623 312.5 0 113 24 -pindel somatic filter v1 ",
		height=0.27778,
		label="pindel somatic filter v1",
		pos="623,315",
		rects="558.5,305.5,687.5,324.5",
		width=1.7917];
	reference -> somaticfilter	[_draw_="c 7 -#000000 B 13 684.61 493.66 670.9 484.99 653 470.02 653 451 653 451 653 451 653 359 653 347.03 652.74 342.89 646 333 645.3 331.97 \
644.52 330.99 643.68 330.04 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 645.43 328.33 638.61 325.42 642.13 331.95 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 673 403.1 0 40 9 -reference ",
		label=reference,
		lp="673,405",
		pos="e,637.49,324.4 684.61,493.66 670.9,484.99 653,470.02 653,451 653,451 653,451 653,359 653,347.03 652.74,342.89 646,333 645.3,331.97 \
644.52,330.99 643.68,330.04"];
	filter	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 572.5 80.5 572.5 99.5 673.5 99.5 673.5 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 623 87.5 0 85 18 -fp_filter workflow ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="fp_filter workflow",
		pos="623,90",
		rects="572.5,80.5,673.5,99.5",
		width=1.4028];
	reference -> filter	[_draw_="c 7 -#000000 B 10 700 493.7 700 483.6 700 466.05 700 451 700 451 700 451 700 134 700 118.74 688.34 108.85 674.09 102.46 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 675.27 100.29 667.86 99.98 673.46 104.84 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 720 290.6 0 40 9 -reference ",
		label=reference,
		lp="720,292.5",
		pos="e,666.45,99.421 700,493.7 700,483.6 700,466.05 700,451 700,451 700,451 700,134 700,118.74 688.34,108.85 674.09,102.46"];
	reference -> pindel_cat	[_draw_="c 7 -#000000 B 13 682.96 493.59 677.27 490.81 670.88 487.74 665 485 640.29 473.49 629.06 478.46 609 460 601.54 453.13 606.31 445.82 \
598 440 572.59 422.22 492.56 413.37 436.39 409.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 436.6 406.8 429.45 408.75 436.25 411.69 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 629 448.1 0 40 9 -reference ",
		label=reference,
		lp="629,450",
		pos="e,427.94,408.64 682.96,493.59 677.27,490.81 670.88,487.74 665,485 640.29,473.49 629.06,478.46 609,460 601.54,453.13 606.31,445.82 \
598,440 572.59,422.22 492.56,413.37 436.39,409.24"];
	tumor_sample_name -> pindel_cat	[_draw_="c 7 -#000000 B 10 458.64 493.54 445.94 486.22 428.74 474.53 418 460 407.64 445.99 415.87 436.63 405 423 403.99 421.73 402.86 420.53 \
401.64 419.4 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 403.33 417.61 396.3 415.26 400.33 421.48 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 460.5 448.1 0 85 17 -tumor_sample_name ",
		label=tumor_sample_name,
		lp="460.5,450",
		pos="e,395.1,414.33 458.64,493.54 445.94,486.22 428.74,474.53 418,460 407.64,445.99 415.87,436.63 405,423 403.99,421.73 402.86,420.53 \
401.64,419.4"];
	tumor_bam -> filter	[_draw_="c 7 -#000000 B 10 53.79 493.71 54.68 483.62 56 466.08 56 451 56 451 56 451 56 134 56 108.71 419.3 96.36 564.28 92.43 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 564.24 94.88 571.17 92.25 564.11 89.99 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 65.5 290.6 0 19 3 -bam ",
		label=bam,
		lp="65.5,292.5",
		pos="e,572.68,92.208 53.788,493.71 54.677,483.62 56,466.08 56,451 56,451 56,451 56,134 56,108.71 419.3,96.357 564.28,92.433"];
	tumor_bam -> pindel_cat	[_draw_="c 7 -#000000 B 7 56.34 493.67 62.23 480.14 75.75 453.55 96 440 131.5 416.26 248.06 409.08 319.73 406.92 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 319.8 409.37 326.73 406.72 319.66 404.47 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 119 448.1 0 46 9 -tumor_bam ",
		label=tumor_bam,
		lp="119,450",
		pos="e,328.24,406.68 56.344,493.67 62.225,480.14 75.748,453.55 96,440 131.5,416.26 248.06,409.08 319.73,406.92"];
	normal_bam -> pindel_cat	[_draw_="c 7 -#000000 B 7 204.48 493.51 202.64 480.23 201.29 454.58 215 440 229.27 424.83 279.1 415.97 319.95 411.11 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 320.07 413.57 326.75 410.34 319.52 408.7 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 240.5 448.1 0 51 10 -normal_bam ",
		label=normal_bam,
		lp="240.5,450",
		pos="e,328.25,410.17 204.48,493.51 202.64,480.23 201.29,454.58 215,440 229.27,424.83 279.1,415.97 319.95,411.11"];
	split_interval_list_to_bed	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 267.5 440.5 267.5 459.5 406.5 459.5 406.5 440.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 337 447.5 0 123 26 -split_interval_list_to_bed ",
		height=0.27778,
		label=split_interval_list_to_bed,
		pos="337,450",
		rects="267.5,440.5,406.5,459.5",
		width=1.9306];
	scatter_count -> split_interval_list_to_bed	[_draw_="c 7 -#000000 B 4 363.72 493.58 359.1 486.23 352.29 475.37 346.7 466.46 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 348.79 465.17 342.99 460.55 344.64 467.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 381 470.6 0 56 13 -scatter_count ",
		label=scatter_count,
		lp="381,472.5",
		pos="e,342.19,459.26 363.72,493.58 359.1,486.23 352.29,475.37 346.7,466.46"];
	normal_sample_name -> pindel_cat	[_draw_="c 7 -#000000 B 10 572.17 493.6 552.91 486.98 528.31 476.13 511 460 503.58 453.08 507.95 446.3 500 440 481.81 425.59 457.89 417.29 \
436.05 412.5 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 436.63 410.12 429.28 411.13 435.66 414.92 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 556 448.1 0 90 18 -normal_sample_name ",
		label=normal_sample_name,
		lp="556,450",
		pos="e,427.8,410.83 572.17,493.6 552.91,486.98 528.31,476.13 511,460 503.58,453.08 507.95,446.3 500,440 481.81,425.59 457.89,417.29 436.05,\
412.5"];
	interval_list -> split_interval_list_to_bed	[_draw_="c 7 -#000000 B 7 287.58 493.78 289.41 486.24 293.1 475.18 300 468 301.46 466.48 303.08 465.09 304.8 463.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 305.9 466.01 310.55 460.23 303.31 461.85 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 323.5 470.6 0 47 13 -interval_list ",
		label=interval_list,
		lp="323.5,472.5",
		pos="e,311.83,459.43 287.58,493.78 289.41,486.24 293.1,475.18 300,468 301.46,466.48 303.08,465.09 304.8,463.81"];
	bgzip	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 590.5 260.5 590.5 279.5 655.5 279.5 655.5 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 623 267.5 0 49 9 -bgzip VCF ",
		height=0.27778,
		label="bgzip VCF",
		pos="623,270",
		rects="590.5,260.5,655.5,279.5",
		width=0.90278];
	somaticfilter -> bgzip	[_draw_="c 7 -#000000 B 4 623 305.71 623 300.59 623 293.85 623 287.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 625.45 287.78 623 280.78 620.55 287.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 629.5 290.6 0 13 4 -file ",
		label=file,
		lp="629.5,292.5",
		pos="e,623,279.27 623,305.71 623,300.59 623,293.85 623,287.67"];
	split_interval_list_to_bed -> pindel_cat	[_draw_="c 7 -#000000 B 4 344.91 440.71 350.46 434.88 358.04 426.93 364.54 420.12 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 366.02 422.12 369.07 415.36 362.47 418.74 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 382.5 425.6 0 43 11 -region_file ",
		label=region_file,
		lp="382.5,427.5",
		pos="e,370.12,414.27 344.91,440.71 350.46,434.88 358.04,426.93 364.54,420.12"];
	index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 592 215.5 592 234.5 654 234.5 654 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 623 222.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="623,225",
		rects="592,215.5,654,234.5",
		width=0.86111];
	remove_end_tags	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 558.5 170.5 558.5 189.5 687.5 189.5 687.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 623 177.5 0 113 20 -remove END INFO tags ",
		height=0.27778,
		label="remove END INFO tags",
		pos="623,180",
		rects="558.5,170.5,687.5,189.5",
		width=1.7917];
	index -> remove_end_tags	[_draw_="c 7 -#000000 B 4 623 215.71 623 210.59 623 203.85 623 197.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 625.45 197.78 623 190.78 620.55 197.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 629.5 200.6 0 13 3 -vcf ",
		label=vcf,
		lp="629.5,202.5",
		pos="e,623,189.27 623,215.71 623,210.59 623,203.85 623,197.67"];
	filter -> unfiltered_vcf	[_draw_="c 7 -#000000 B 4 615.29 80.71 609.86 74.88 602.47 66.93 596.13 60.12 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 598.28 58.83 591.72 55.37 594.69 62.17 ",
		pos="e,590.69,54.265 615.29,80.709 609.86,74.879 602.47,66.934 596.13,60.117"];
	filter -> filtered_vcf	[_draw_="c 7 -#000000 B 4 630.91 80.71 636.46 74.88 644.04 66.93 650.54 60.12 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 652.02 62.12 655.07 55.36 648.47 58.74 ",
		pos="e,656.12,54.265 630.91,80.709 636.46,74.879 644.04,66.934 650.54,60.117"];
	cat_all	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 444.5 350.5 444.5 369.5 493.5 369.5 493.5 350.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 469 357.5 0 33 7 -cat_all ",
		height=0.27778,
		label=cat_all,
		pos="469,360",
		rects="444.5,350.5,493.5,369.5",
		width=0.68056];
	pindel_cat -> cat_all	[_draw_="c 7 -#000000 B 4 395.98 395.5 409.56 389.09 428.39 380.19 443.53 373.04 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 444.41 375.33 449.69 370.12 442.31 370.9 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 470 380.6 0 78 18 -region_pindel_outs ",
		label=region_pindel_outs,
		lp="470,382.5",
		pos="e,451.06,369.48 395.98,395.5 409.56,389.09 428.39,380.19 443.53,373.04"];
	cat_all -> somaticfilter	[_draw_="c 7 -#000000 B 7 493.26 350.78 509.5 345.41 531.42 338.41 551 333 559.26 330.72 568.1 328.47 576.66 326.4 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 577.04 328.83 583.28 324.82 575.9 324.06 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 600 335.6 0 98 21 -pindel_output_summary ",
		label=pindel_output_summary,
		lp="600,337.5",
		pos="e,584.75,324.47 493.26,350.78 509.5,345.41 531.42,338.41 551,333 559.26,330.72 568.1,328.47 576.66,326.4"];
	bgzip -> index	[_draw_="c 7 -#000000 B 4 623 260.71 623 255.59 623 248.85 623 242.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 625.45 242.78 623 235.78 620.55 242.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 629.5 245.6 0 13 3 -vcf ",
		label=vcf,
		lp="629.5,247.5",
		pos="e,623,234.27 623,260.71 623,255.59 623,248.85 623,242.67"];
	reindex	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 592 125.5 592 144.5 654 144.5 654 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 623 132.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="623,135",
		rects="592,125.5,654,144.5",
		width=0.86111];
	reindex -> filter	[_draw_="c 7 -#000000 B 4 623 125.71 623 120.59 623 113.85 623 107.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 625.45 107.78 623 100.78 620.55 107.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 629.5 110.6 0 13 3 -vcf ",
		label=vcf,
		lp="629.5,112.5",
		pos="e,623,99.265 623,125.71 623,120.59 623,113.85 623,107.67"];
	remove_end_tags -> reindex	[_draw_="c 7 -#000000 B 4 623 170.71 623 165.59 623 158.85 623 152.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 625.45 152.78 623 145.78 620.55 152.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 629.5 155.6 0 13 3 -vcf ",
		label=vcf,
		lp="629.5,157.5",
		pos="e,623,144.27 623,170.71 623,165.59 623,158.85 623,152.67"];
}