digraph workflow {
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	subgraph cluster_outputs {
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			lp="238,17.5",
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			width=2.125];
		tag_directory	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 192.5 35.5 192.5 54.5 273.5 54.5 273.5 35.5 ",
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			pos="233,45",
			rects="192.5,35.5,273.5,54.5",
			width=1.125];
		bam	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 278 35.5 278 54.5 316 54.5 316 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 297 42.5 0 22 3 -bam ",
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			label=bam,
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			rects="278,35.5,316,54.5",
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		flagstats	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 849.5 35.5 849.5 54.5 908.5 54.5 908.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 879 42.5 0 43 9 -flagstats ",
			fillcolor="#94DDF4",
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			label=flagstats,
			pos="879,45",
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			width=0.81944];
		alignment_summary_metrics	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 913 35.5 913 54.5 1073 54.5 1073 35.5 ",
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		wgs_metrics	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1077 35.5 1077 54.5 1155 54.5 1155 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1116 42.5 0 62 11 -wgs_metrics ",
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			label=mark_duplicates_metrics,
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			rects="320,35.5,460,54.5",
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		per_base_hs_metrics	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1159.5 35.5 1159.5 54.5 1278.5 54.5 1278.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1219 42.5 0 103 19 -per_base_hs_metrics ",
			fillcolor="#94DDF4",
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			label=per_base_hs_metrics,
			pos="1219,45",
			rects="1159.5,35.5,1278.5,54.5",
			width=1.6528];
		per_target_coverage_metrics	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1282.5 35.5 1282.5 54.5 1441.5 54.5 1441.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1362 42.5 0 143 27 -per_target_coverage_metrics ",
			fillcolor="#94DDF4",
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			label=per_target_coverage_metrics,
			pos="1362,45",
			rects="1282.5,35.5,1441.5,54.5",
			width=2.2083];
		gc_bias_metrics_summary	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1445.5 35.5 1445.5 54.5 1592.5 54.5 1592.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1519 42.5 0 131 23 -gc_bias_metrics_summary ",
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			width=2.0417];
		insert_size_metrics	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1596.5 35.5 1596.5 54.5 1707.5 54.5 1707.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1652 42.5 0 95 19 -insert_size_metrics ",
			fillcolor="#94DDF4",
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			label=insert_size_metrics,
			pos="1652,45",
			rects="1596.5,35.5,1707.5,54.5",
			width=1.5417];
		bamcoverage_bigwig	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1711.5 35.5 1711.5 54.5 1832.5 54.5 1832.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1772 42.5 0 105 18 -bamcoverage_bigwig ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=bamcoverage_bigwig,
			pos="1772,45",
			rects="1711.5,35.5,1832.5,54.5",
			width=1.6806];
	}
	qc	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 1046 88.5 1046 107.5 1186 107.5 1186 88.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1116 95.5 0 124 21 -WGS QC workflow mouse ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="WGS QC workflow mouse",
		pos="1116,98",
		rects="1046,88.5,1186,107.5",
		width=1.9444];
	picard_metric_accumulation_level -> qc	[_draw_="c 7 -#000000 B 7 1394.31 186.59 1379.67 172.95 1348.58 146.21 1317 133 1278.13 116.75 1231.96 108.26 1193.67 103.83 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1194.35 101.44 1187.13 103.11 1193.82 106.31 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1421 141.1 0 138 32 -picard_metric_accumulation_level ",
		label=picard_metric_accumulation_level,
		lp="1421,143",
		pos="e,1185.6,102.94 1394.3,186.59 1379.7,172.95 1348.6,146.21 1317,133 1278.1,116.75 1232,108.26 1193.7,103.83"];
	alignment	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 405.5 133.5 405.5 152.5 542.5 152.5 542.5 133.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 474 140.5 0 121 22 -Alignment without BQSR ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="Alignment without BQSR",
		pos="474,143",
		rects="405.5,133.5,542.5,152.5",
		width=1.9028];
	reference -> alignment	[_draw_="c 7 -#000000 B 7 626.2 186.63 614.52 178.76 595.84 167.29 578 161 569.26 157.92 559.9 155.39 550.52 153.32 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 551.12 150.94 543.77 151.92 550.12 155.74 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 617 163.6 0 40 9 -reference ",
		label=reference,
		lp="617,165.5",
		pos="e,542.28,151.61 626.2,186.63 614.52,178.76 595.84,167.29 578,161 569.26,157.92 559.9,155.39 550.52,153.32"];
	reference -> qc	[_draw_="c 7 -#000000 B 7 647.9 186.64 664.52 173.06 699.62 146.4 734 133 787.52 112.13 942.42 103.95 1037.74 100.83 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1037.77 103.28 1044.69 100.61 1037.61 98.38 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 754 141.1 0 40 9 -reference ",
		label=reference,
		lp="754,143",
		pos="e,1046.2,100.56 647.9,186.64 664.52,173.06 699.62,146.4 734,133 787.52,112.13 942.42,103.95 1037.7,100.83"];
	chipseq_sequence -> alignment	[_draw_="c 7 -#000000 B 4 474 186.58 474 179.52 474 169.24 474 160.55 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 495 163.6 0 42 9 -unaligned ",
		label=unaligned,
		lp="495,165.5",
		pos="e,474,152.26 474,186.58 474,179.52 474,169.24 474,160.55"];
	final_name -> alignment	[_draw_="c 7 -#000000 B 7 556.32 186.71 546.48 179.33 531.29 168.56 517 161 513.46 159.13 509.67 157.34 505.86 155.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 506.88 153.44 499.48 153.02 505 157.97 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 554 163.6 0 46 10 -final_name ",
		label=final_name,
		lp="554,165.5",
		pos="e,498.08,152.44 556.32,186.71 546.48,179.33 531.29,168.56 517,161 513.46,159.13 509.67,157.34 505.86,155.67"];
	per_target_intervals -> qc	[_draw_="c 7 -#000000 B 7 738.01 186.87 750.38 173.13 777.57 145.61 807 133 847.21 115.77 960.38 106.73 1038 102.41 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1037.97 104.87 1044.83 102.04 1037.7 99.98 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 848 141.1 0 82 20 -per_target_intervals ",
		label=per_target_intervals,
		lp="848,143",
		pos="e,1046.3,101.96 738.01,186.87 750.38,173.13 777.57,145.61 807,133 847.21,115.77 960.38,106.73 1038,102.41"];
	per_base_intervals -> qc	[_draw_="c 7 -#000000 B 7 854.23 186.58 866.48 172.91 892.73 146.14 921 133 957.36 116.1 1001.08 107.55 1037.9 103.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1037.94 105.7 1044.63 102.49 1037.4 100.83 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 959.5 141.1 0 77 18 -per_base_intervals ",
		label=per_base_intervals,
		lp="959.5,143",
		pos="e,1046.1,102.33 854.23,186.58 866.48,172.91 892.73,146.14 921,133 957.36,116.1 1001.1,107.55 1037.9,103.24"];
	minimum_base_quality -> qc	[_draw_="c 7 -#000000 B 7 975.72 186.54 983.5 173.32 1000.26 147.74 1021 133 1035.6 122.62 1053.7 115.11 1070.17 109.83 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1070.67 112.24 1076.65 107.85 1069.24 107.55 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1068 141.1 0 94 20 -minimum_base_quality ",
		label=minimum_base_quality,
		lp="1068,143",
		pos="e,1078.1,107.41 975.72,186.54 983.5,173.32 1000.3,147.74 1021,133 1035.6,122.62 1053.7,115.11 1070.2,109.83"];
	minimum_mapping_quality -> qc	[_draw_="c 7 -#000000 B 4 1116 186.82 1116 171.17 1116 136.71 1116 115.91 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1118.45 115.95 1116 108.95 1113.55 115.95 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1170.5 141.1 0 109 23 -minimum_mapping_quality ",
		label=minimum_mapping_quality,
		lp="1170.5,143",
		pos="e,1116,107.44 1116,186.82 1116,171.17 1116,136.71 1116,115.91"];
	summary_intervals -> qc	[_draw_="c 7 -#000000 B 7 1249.98 186.91 1247.89 173.72 1241.89 147.61 1226 133 1214.35 122.28 1199.38 114.94 1184.26 109.92 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1185.21 107.65 1177.8 107.94 1183.78 112.33 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1277.5 141.1 0 77 17 -summary_intervals ",
		label=summary_intervals,
		lp="1277.5,143",
		pos="e,1176.4,107.49 1250,186.91 1247.9,173.72 1241.9,147.61 1226,133 1214.3,122.28 1199.4,114.94 1184.3,109.92"];
	alignment -> bam	[_draw_="c 7 -#000000 B 7 455.46 133.68 425.98 120.21 366.98 92.15 320 63 318.15 61.85 316.27 60.6 314.41 59.32 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 315.85 57.34 308.74 55.22 312.97 61.3 ",
		pos="e,307.51,54.329 455.46,133.68 425.98,120.21 366.98,92.146 320,63 318.15,61.855 316.27,60.605 314.41,59.319"];
	alignment -> mark_duplicates_metrics	[_draw_="c 7 -#000000 B 4 466.84 133.82 452.65 117.6 420.8 81.2 402.88 60.72 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 404.83 59.23 398.38 55.58 401.15 62.46 ",
		pos="e,397.38,54.438 466.84,133.82 452.65,117.6 420.8,81.203 402.88,60.721"];
	bam_to_sam	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 199 88.5 199 107.5 333 107.5 333 88.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 266 95.5 0 118 21 -BAM to SAM conversion ",
		height=0.27778,
		label="BAM to SAM conversion",
		pos="266,98",
		rects="199,88.5,333,107.5",
		width=1.8611];
	alignment -> bam_to_sam	[_draw_="c 7 -#000000 B 7 417.72 133.54 402.51 131.03 386.09 128.11 371 125 349.11 120.49 324.88 114.56 305.22 109.49 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 305.95 107.15 298.56 107.77 304.72 111.9 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 380.5 118.6 0 19 3 -bam ",
		label=bam,
		lp="380.5,120.5",
		pos="e,297.1,107.39 417.72,133.54 402.51,131.03 386.09,128.11 371,125 349.11,120.49 324.88,114.56 305.22,109.49"];
	alignment -> qc	[_draw_="c 7 -#000000 B 7 516.93 133.52 549.04 127.54 594.09 119.93 634 116 775.96 102.02 942.43 99.12 1037.92 98.74 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1037.87 101.19 1044.86 98.72 1037.85 96.29 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 643.5 118.6 0 19 3 -bam ",
		label=bam,
		lp="643.5,120.5",
		pos="e,1046.4,98.713 516.93,133.52 549.04,127.54 594.09,119.93 634,116 775.96,102.02 942.43,99.117 1037.9,98.74"];
	homer_tag_directory	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 0 35.5 0 54.5 176 54.5 176 35.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 88 42.5 0 160 32 -Creating the homer tag directory ",
		height=0.27778,
		label="Creating the homer tag directory",
		pos="88,45",
		rects="0,35.5,176,54.5",
		width=2.4444];
	bam_to_sam -> homer_tag_directory	[_draw_="c 7 -#000000 B 4 236.61 88.58 206.2 79.87 158.62 66.23 125.52 56.75 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 126.3 54.42 118.89 54.85 124.95 59.13 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 212 73.6 0 18 3 -sam ",
		label=sam,
		lp="212,75.5",
		pos="e,117.44,54.434 236.61,88.578 206.2,79.867 158.62,66.235 125.52,56.75"];
	qc -> per_target_hs_metrics	[_draw_="c 7 -#000000 B 7 1185.97 95.71 1341.1 92.51 1709.92 83 1833 63 1842.76 61.41 1853.17 59.05 1862.78 56.59 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1863.37 58.97 1869.51 54.81 1862.12 54.23 ",
		pos="e,1871,54.42 1186,95.707 1341.1,92.51 1709.9,83.004 1833,63 1842.8,61.414 1853.2,59.054 1862.8,56.592"];
	qc -> summary_hs_metrics	[_draw_="c 7 -#000000 B 10 1185.63 95.85 1296.18 93.83 1518.6 88.99 1707 80 1820.46 74.59 1849.89 81.23 1962 63 1971.62 61.44 1981.88 59.08 \
1991.34 56.62 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1991.83 59.03 1997.95 54.84 1990.55 54.3 ",
		pos="e,1999.4,54.449 1185.6,95.849 1296.2,93.831 1518.6,88.986 1707,80 1820.5,74.588 1849.9,81.229 1962,63 1971.6,61.436 1981.9,59.083 \
1991.3,56.622"];
	qc -> gc_bias_metrics_chart	[_draw_="c 7 -#000000 B 10 1185.87 96.12 1310.9 94.36 1581.15 89.71 1809 80 1933.56 74.69 1965.85 82.42 2089 63 2098.76 61.46 2109.18 59.12 \
2118.79 56.66 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2119.39 59.03 2125.52 54.87 2118.13 54.3 ",
		pos="e,2127,54.481 1185.9,96.12 1310.9,94.359 1581.1,89.709 1809,80 1933.6,74.693 1965.8,82.416 2089,63 2098.8,61.461 2109.2,59.116 2118.8,\
56.655"];
	qc -> gc_bias_metrics	[_draw_="c 7 -#000000 B 7 1046.18 95.18 918.94 91.44 654.14 81.65 564 63 556.85 61.52 549.3 59.39 542.24 57.15 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 543.08 54.84 535.66 54.96 541.53 59.49 ",
		pos="e,534.23,54.48 1046.2,95.175 918.94,91.438 654.14,81.654 564,63 556.85,61.52 549.3,59.395 542.24,57.146"];
	qc -> insert_size_histogram	[_draw_="c 7 -#000000 B 7 1046.12 95.21 961.69 92.16 815.57 84.1 692 63 682.44 61.37 672.23 59.04 662.77 56.62 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 663.55 54.29 656.15 54.88 662.3 59.03 ",
		pos="e,654.69,54.496 1046.1,95.206 961.69,92.164 815.57,84.095 692,63 682.44,61.368 672.23,59.037 662.77,56.623"];
	qc -> per_base_coverage_metrics	[_draw_="c 7 -#000000 B 10 1046.39 91.4 1015.03 88.55 977.58 84.69 944 80 901.95 74.13 891.67 71.14 850 63 839.1 60.87 827.4 58.48 816.37 \
56.17 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 816.93 53.79 809.58 54.75 815.92 58.58 ",
		pos="e,808.09,54.435 1046.4,91.401 1015,88.55 977.58,84.688 944,80 901.95,74.13 891.67,71.139 850,63 839.1,60.871 827.4,58.478 816.37,\
56.174"];
	qc -> flagstats	[_draw_="c 7 -#000000 B 7 1046.18 90.5 1006.45 85.53 956.15 77.05 913 63 909.05 61.71 904.99 60.03 901.11 58.23 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 902.2 56.04 894.84 55.11 900.02 60.42 ",
		pos="e,893.49,54.439 1046.2,90.505 1006.4,85.529 956.15,77.051 913,63 909.05,61.714 904.99,60.033 901.11,58.228"];
	qc -> alignment_summary_metrics	[_draw_="c 7 -#000000 B 4 1095.69 88.58 1075.3 80.13 1043.74 67.04 1020.99 57.61 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1022.14 55.43 1014.74 55.01 1020.27 59.96 ",
		pos="e,1013.3,54.434 1095.7,88.578 1075.3,80.126 1043.7,67.039 1021,57.605"];
	qc -> wgs_metrics	[_draw_="c 7 -#000000 B 4 1116 88.58 1116 81.52 1116 71.24 1116 62.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1118.45 62.78 1116 55.78 1113.55 62.78 ",
		pos="e,1116,54.265 1116,88.578 1116,81.523 1116,71.24 1116,62.547"];
	qc -> per_base_hs_metrics	[_draw_="c 7 -#000000 B 4 1133.01 88.58 1149.78 80.27 1175.59 67.49 1194.56 58.1 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1195.42 60.41 1200.61 55.11 1193.25 56.02 ",
		pos="e,1202,54.434 1133,88.578 1149.8,80.273 1175.6,67.495 1194.6,58.103"];
	qc -> per_target_coverage_metrics	[_draw_="c 7 -#000000 B 4 1156.9 88.52 1199.73 79.64 1267 65.7 1312.73 56.22 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1313.17 58.63 1319.52 54.81 1312.17 53.83 ",
		pos="e,1321,54.499 1156.9,88.521 1199.7,79.642 1267,65.695 1312.7,56.215"];
	qc -> gc_bias_metrics_summary	[_draw_="c 7 -#000000 B 7 1185.94 92.01 1252.16 86.75 1354.23 77.22 1442 63 1453.31 61.17 1465.45 58.72 1476.68 56.25 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1476.89 58.71 1483.19 54.79 1475.82 53.93 ",
		pos="e,1484.7,54.455 1185.9,92.013 1252.2,86.747 1354.2,77.219 1442,63 1453.3,61.168 1465.5,58.717 1476.7,56.247"];
	qc -> insert_size_metrics	[_draw_="c 7 -#000000 B 7 1185.68 96.58 1279.09 94.99 1449.75 88.45 1593 63 1601.5 61.49 1610.53 59.23 1618.9 56.85 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1619.54 59.22 1625.56 54.89 1618.15 54.52 ",
		pos="e,1627,54.457 1185.7,96.583 1279.1,94.991 1449.7,88.454 1593,63 1601.5,61.489 1610.5,59.233 1618.9,56.854"];
	qc -> bamcoverage_bigwig	[_draw_="c 7 -#000000 B 7 1185.78 95.02 1320.01 90.88 1609.57 80.23 1708 63 1717.28 61.38 1727.17 59.05 1736.34 56.64 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1736.94 59.01 1743.05 54.81 1735.65 54.29 ",
		pos="e,1744.5,54.417 1185.8,95.021 1320,90.879 1609.6,80.23 1708,63 1717.3,61.376 1727.2,59.051 1736.3,56.639"];
	homer_tag_directory -> tag_directory;
}