digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 323 407 323 407 0 ",
		bb="0,0,407,323",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
	];
	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 260 8 315 399 315 399 260 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 303 0 84 15 -Workflow Inputs ",
			bb="8,260,399,315",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,305.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		tumor_cram	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 315 268.5 315 287.5 391 287.5 391 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 353 275.5 0 60 10 -tumor_cram ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=tumor_cram,
			pos="353,278",
			rects="315,268.5,391,287.5",
			width=1.0556];
		interval_list	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 237 268.5 237 287.5 311 287.5 311 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 274 275.5 0 58 13 -interval_list ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=interval_list,
			pos="274,278",
			rects="237,268.5,311,287.5",
			width=1.0278];
		normal_cram	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16.5 268.5 16.5 287.5 97.5 287.5 97.5 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 57 275.5 0 65 11 -normal_cram ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=normal_cram,
			pos="57,278",
			rects="16.5,268.5,97.5,287.5",
			width=1.125];
		reference	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 101.5 268.5 101.5 287.5 164.5 287.5 164.5 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 133 275.5 0 47 9 -reference ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=reference,
			pos="133,278",
			rects="101.5,268.5,164.5,287.5",
			width=0.875];
		docm_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 169 268.5 169 287.5 233 287.5 233 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 201 275.5 0 48 8 -docm_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=docm_vcf,
			pos="201,278",
			rects="169,268.5,233,287.5",
			width=0.88889];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 118 8 118 63 293 63 293 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 172 15 0 92 16 -Workflow Outputs ",
			bb="118,8,293,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="172,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		filtered_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 213.5 35.5 213.5 54.5 284.5 54.5 284.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 249 42.5 0 55 12 -filtered_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=filtered_vcf,
			pos="249,45",
			rects="213.5,35.5,284.5,54.5",
			width=0.98611];
		unfiltered_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 126.5 35.5 126.5 54.5 209.5 54.5 209.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 168 42.5 0 67 14 -unfiltered_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=unfiltered_vcf,
			pos="168,45",
			rects="126.5,35.5,209.5,54.5",
			width=1.1528];
	}
	docm_filter	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 196.5 170.5 196.5 189.5 265.5 189.5 265.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 231 177.5 0 53 11 -docm filter ",
		height=0.27778,
		label="docm filter",
		pos="231,180",
		rects="196.5,170.5,265.5,189.5",
		width=0.95833];
	tumor_cram -> docm_filter	[_draw_="c 7 -#000000 B 7 351.19 268.63 349.23 261.19 345.48 250.39 339 243 318.38 219.49 286.58 202.75 262.82 192.64 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 263.9 190.44 256.5 190.04 262.04 194.97 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 355.5 223.1 0 49 10 -tumor_cram ",
		label=tumor_cram,
		lp="355.5,225",
		pos="e,255.1,189.47 351.19,268.63 349.23,261.19 345.48,250.39 339,243 318.38,219.49 286.58,202.75 262.82,192.64"];
	GATK_haplotype_caller	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 126 215.5 126 234.5 276 234.5 276 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 201 222.5 0 134 26 -HaplotypeCaller (GATK 3.6) ",
		height=0.27778,
		label="HaplotypeCaller (GATK 3.6)",
		pos="201,225",
		rects="126,215.5,276,234.5",
		width=2.0833];
	tumor_cram -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 342.72 268.61 332.52 260.74 316.1 249.25 300 243 293.31 240.41 286.22 238.21 279.03 236.34 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 280.04 234.07 272.66 234.8 278.89 238.83 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 327.5 245.6 0 21 4 -cram ",
		label=cram,
		lp="327.5,247.5",
		pos="e,271.19,234.45 342.72,268.61 332.52,260.74 316.1,249.25 300,243 293.31,240.41 286.22,238.21 279.03,236.34"];
	interval_list -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 267.43 268.52 261.27 261.01 251.45 250.16 241 243 238.35 241.18 235.47 239.49 232.51 237.95 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 233.82 235.86 226.45 235.05 231.71 240.28 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 275.5 245.6 0 47 13 -interval_list ",
		label=interval_list,
		lp="275.5,247.5",
		pos="e,225.08,234.4 267.43,268.52 261.27,261.01 251.45,250.16 241,243 238.35,241.18 235.47,239.49 232.51,237.95"];
	normal_cram -> docm_filter	[_draw_="c 7 -#000000 B 7 56.29 268.86 55.62 255.62 56.39 229.42 71 215 87.31 198.9 146.64 189.59 188.27 184.9 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 188.4 187.35 195.1 184.16 187.87 182.48 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 97.5 223.1 0 53 11 -normal_cram ",
		label=normal_cram,
		lp="97.5,225",
		pos="e,196.6,184 56.292,268.86 55.622,255.62 56.395,229.42 71,215 87.306,198.9 146.64,189.59 188.27,184.9"];
	normal_cram -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 64.12 268.52 71.31 260.57 83.15 249.03 96 243 102.88 239.77 110.25 237.15 117.79 235.01 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 118.39 237.38 124.55 233.25 117.16 232.64 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 122.5 245.6 0 53 11 -normal_cram ",
		label=normal_cram,
		lp="122.5,247.5",
		pos="e,126.02,232.87 64.122,268.52 71.307,260.57 83.152,249.03 96,243 102.88,239.77 110.25,237.15 117.79,235.01"];
	reference -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 137.84 268.73 142.64 261.16 150.61 250.08 160 243 162.42 241.18 165.06 239.51 167.8 238 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 168.65 240.31 173.84 235.02 166.48 235.92 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 180 245.6 0 40 9 -reference ",
		label=reference,
		lp="180,247.5",
		pos="e,175.2,234.35 137.84,268.73 142.64,261.16 150.61,250.08 160,243 162.42,241.18 165.06,239.51 167.8,238"];
	docm_vcf -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 4 201 268.58 201 261.52 201 251.24 201 242.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 203.45 242.78 201 235.78 198.55 242.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 220.5 245.6 0 39 8 -docm_vcf ",
		label=docm_vcf,
		lp="220.5,247.5",
		pos="e,201,234.26 201,268.58 201,261.52 201,251.24 201,242.55"];
	bgzip	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 204.5 125.5 204.5 144.5 269.5 144.5 269.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 237 132.5 0 49 9 -bgzip VCF ",
		height=0.27778,
		label="bgzip VCF",
		pos="237,135",
		rects="204.5,125.5,269.5,144.5",
		width=0.90278];
	docm_filter -> bgzip	[_draw_="c 7 -#000000 B 4 232.16 170.71 232.87 165.59 233.81 158.85 234.67 152.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 237.1 153.04 235.64 145.76 232.24 152.36 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 240.5 155.6 0 13 4 -file ",
		label=file,
		lp="240.5,157.5",
		pos="e,235.85,144.27 232.16,170.71 232.87,165.59 233.81,158.85 234.67,152.67"];
	index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 217 80.5 217 99.5 279 99.5 279 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 248 87.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="248,90",
		rects="217,80.5,279,99.5",
		width=0.86111];
	index -> filtered_vcf	[_draw_="c 7 -#000000 B 4 248.19 80.71 248.31 75.59 248.47 68.85 248.61 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 251.06 62.83 248.77 55.78 246.16 62.72 ",
		pos="e,248.81,54.265 248.19,80.709 248.31,75.593 248.47,68.848 248.61,62.666"];
	GATK_haplotype_caller -> unfiltered_vcf	[_draw_="c 7 -#000000 B 10 196.57 215.69 192.47 207.22 187 193.56 187 181 187 181 187 181 187 89 187 79.33 182.93 69.4 178.56 61.52 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 180.75 60.4 175.01 55.7 176.56 62.95 ",
		pos="e,174.22,54.411 196.57,215.69 192.47,207.22 187,193.56 187,181 187,181 187,181 187,89 187,79.329 182.93,69.397 178.56,61.519"];
	GATK_haplotype_caller -> docm_filter	[_draw_="c 7 -#000000 B 4 206.78 215.71 210.69 210.12 215.94 202.58 220.57 195.96 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 222.37 197.65 224.37 190.51 218.35 194.85 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 238 200.6 0 40 8 -docm_out ",
		label=docm_out,
		lp="238,202.5",
		pos="e,225.23,189.27 206.78,215.71 210.69,210.12 215.94,202.58 220.57,195.96"];
	bgzip -> index	[_draw_="c 7 -#000000 B 4 239.12 125.71 240.46 120.47 242.24 113.53 243.85 107.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 246.15 108.12 245.51 100.73 241.4 106.91 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 249.5 110.6 0 13 3 -vcf ",
		label=vcf,
		lp="249.5,112.5",
		pos="e,245.89,99.265 239.12,125.71 240.46,120.47 242.24,113.53 243.85,107.24"];
}