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	strand -> stringtie	[_draw_="c 7 -#000000 B 13 302.82 268.66 307.78 265.33 313.9 261.84 320 260 369.25 245.11 549 277.45 549 226 549 226 549 226 549 134 549 \
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		label=read_group_id,
		lp="1379,247.5",
		pos="e,917.8,227.38 1414.7,268.57 1406.5,265.46 1396.9,262.17 1388,260 1331.4,246.23 1316.1,247.86 1258,243 1146.1,233.64 1018.5,229.43 \
926.07,227.54"];
	trimming_adapter_min_overlap -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 13 444.29 268.58 459.72 265.51 477.64 262.25 494 260 514.99 257.12 570.05 261.48 589 252 593.79 249.6 592.21 245.4 \
597 243 610.8 236.09 638.91 231.92 669.86 229.43 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 669.91 231.88 676.7 228.91 669.54 227 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 640 245.6 0 86 19 -adapter_min_overlap ",
		label=adapter_min_overlap,
		lp="640,247.5",
		pos="e,678.21,228.8 444.29,268.58 459.72,265.51 477.64,262.25 494,260 514.99,257.12 570.05,261.48 589,252 593.79,249.6 592.21,245.4 597,\
243 610.8,236.09 638.91,231.92 669.86,229.43"];
	trimming_adapter_trim_end -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 10 612.03 268.54 643.02 262.05 680.77 253.89 684 252 688.62 249.29 687.31 245.57 692 243 695.93 240.84 700.06 238.94 \
704.32 237.27 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 704.9 239.66 710.67 235 703.25 235.05 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 728 245.6 0 72 16 -adapter_trim_end ",
		label=adapter_trim_end,
		lp="728,247.5",
		pos="e,712.1,234.49 612.03,268.54 643.02,262.05 680.77,253.89 684,252 688.62,249.29 687.31,245.57 692,243 695.93,240.84 700.06,238.94 \
704.32,237.27"];
	refFlat -> generate_qc_metrics	[_draw_="c 7 -#000000 B 13 1716.53 268.73 1710.61 258.95 1702 241.98 1702 226 1702 226 1702 226 1702 134 1702 82.9 1640.67 114.64 1590 108 \
1506.12 97 1266.89 93 1143.95 91.64 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1144.2 89.2 1137.18 91.57 1144.15 94.1 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1715.5 178.1 0 27 7 -refFlat ",
		label=refFlat,
		lp="1715.5,180",
		pos="e,1135.7,91.553 1716.5,268.73 1710.6,258.95 1702,241.98 1702,226 1702,226 1702,226 1702,134 1702,82.899 1640.7,114.64 1590,108 1506.1,\
97.003 1266.9,93.002 1143.9,91.643"];
	transcript_to_gene	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 283.5 80.5 283.5 99.5 426.5 99.5 426.5 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 355 87.5 0 127 26 -Kallisto: TranscriptToGene ",
		height=0.27778,
		label="Kallisto: TranscriptToGene",
		pos="355,90",
		rects="283.5,80.5,426.5,99.5",
		width=1.9861];
	gene_transcript_lookup_table -> transcript_to_gene	[_draw_="c 7 -#000000 B 10 126.12 268.61 145.85 261.06 168 247.75 168 226 168 226 168 226 168 134 168 110.61 224.27 99.94 275.08 95.08 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 275.24 97.52 282 94.45 274.8 92.64 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 228.5 178.1 0 121 28 -gene_transcript_lookup_table ",
		label=gene_transcript_lookup_table,
		lp="228.5,180",
		pos="e,283.5,94.317 126.12,268.61 145.85,261.06 168,247.75 168,226 168,226 168,226 168,134 168,110.61 224.27,99.941 275.08,95.077"];
	sample_name -> stringtie	[_draw_="c 7 -#000000 B 10 1511.39 268.68 1498.8 259.82 1482 244.53 1482 226 1482 226 1482 226 1482 134 1482 125.84 979.69 100.09 835.98 \
92.89 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 836.46 90.46 829.34 92.55 836.21 95.35 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1511 178.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="1511,180",
		pos="e,827.83,92.479 1511.4,268.68 1498.8,259.82 1482,244.53 1482,226 1482,226 1482,226 1482,134 1482,125.84 979.69,100.09 835.98,92.887"];
	trimming_min_readlength -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 10 739.73 268.6 747.75 264.19 757.28 258.38 765 252 769.13 248.59 768.98 246.53 773 243 774.41 241.76 775.91 240.54 \
777.46 239.35 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 778.83 241.38 783.09 235.3 775.97 237.4 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 805 245.6 0 64 14 -min_readlength ",
		label=min_readlength,
		lp="805,247.5",
		pos="e,784.32,234.42 739.73,268.6 747.75,264.19 757.28,258.38 765,252 769.13,248.59 768.98,246.53 773,243 774.41,241.76 775.91,240.54 \
777.46,239.35"];
	reference_annotation -> stringtie	[_draw_="c 7 -#000000 B 13 1617.61 268.66 1603.9 259.99 1586 245.02 1586 226 1586 226 1586 226 1586 134 1586 101.39 1032.58 101.36 1000 100 \
942.86 97.61 876.64 94.61 836.04 92.76 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 836.39 90.32 829.29 92.45 836.17 95.21 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1630.5 178.1 0 89 20 -reference_annotation ",
		label=reference_annotation,
		lp="1630.5,180",
		pos="e,827.77,92.376 1617.6,268.66 1603.9,259.99 1586,245.02 1586,226 1586,226 1586,226 1586,134 1586,101.39 1032.6,101.36 1000,100 942.86,\
97.607 876.64,94.615 836.04,92.755"];
	reference_index -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 7 846.07 268.51 845.69 261 844.02 250.14 838 243 836.78 241.55 835.4 240.21 833.93 238.99 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 835.35 237 828.17 235.16 832.64 241.08 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 876 245.6 0 66 15 -reference_index ",
		label=reference_index,
		lp="876,247.5",
		pos="e,826.91,234.33 846.07,268.51 845.69,261 844.02,250.14 838,243 836.78,241.55 835.4,240.21 833.93,238.99"];
	trimming_adapters -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 7 944.98 268.5 936.94 260.54 923.79 248.99 910 243 904.48 240.6 898.68 238.54 892.75 236.75 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 893.45 234.4 886.05 234.9 892.14 239.13 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 943.5 245.6 0 37 8 -adapters ",
		label=adapters,
		lp="943.5,247.5",
		pos="e,884.59,234.5 944.98,268.5 936.94,260.54 923.79,248.99 910,243 904.48,240.6 898.68,238.54 892.75,236.75"];
	merge	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 739 170.5 739 189.5 849 189.5 849 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 794 177.5 0 94 15 -Sambamba: merge ",
		height=0.27778,
		label="Sambamba: merge",
		pos="794,180",
		rects="739,170.5,849,189.5",
		width=1.5278];
	mark_dup	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 616 125.5 616 144.5 754 144.5 754 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 685 132.5 0 122 24 -Mark duplicates and Sort ",
		height=0.27778,
		label="Mark duplicates and Sort",
		pos="685,135",
		rects="616,125.5,754,144.5",
		width=1.9167];
	merge -> mark_dup	[_draw_="c 7 -#000000 B 7 783.05 170.69 775.09 164.99 763.85 157.65 753 153 747.54 150.66 741.69 148.59 735.8 146.78 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 736.63 144.47 729.22 144.89 735.27 149.18 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 778.5 155.6 0 19 3 -bam ",
		label=bam,
		lp="778.5,157.5",
		pos="e,727.77,144.47 783.05,170.69 775.09,164.99 763.85,157.65 753,153 747.54,150.66 741.69,148.59 735.8,146.78"];
	index_bam	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 758 125.5 758 144.5 850 144.5 850 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 804 132.5 0 76 14 -samtools index ",
		height=0.27778,
		label="samtools index",
		pos="804,135",
		rects="758,125.5,850,144.5",
		width=1.2778];
	merge -> index_bam	[_draw_="c 7 -#000000 B 4 795.93 170.71 797.15 165.47 798.76 158.53 800.22 152.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 802.54 153.11 801.73 145.74 797.76 152 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 808.5 155.6 0 19 3 -bam ",
		label=bam,
		lp="808.5,157.5",
		pos="e,802.08,144.27 795.93,170.71 797.15,165.47 798.76,158.53 800.22,152.24"];
	mark_dup -> final_bam	[_draw_="c 7 -#000000 B 4 685 125.56 685 111.14 685 81.48 685 62.73 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 687.45 62.8 685 55.8 682.55 62.8 ",
		pos="e,685,54.284 685,125.56 685,111.14 685,81.476 685,62.727"];
	mark_dup -> stringtie	[_draw_="c 7 -#000000 B 4 707.33 125.5 724.66 118.91 748.87 109.7 767.91 102.45 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 768.64 104.8 774.31 100.02 766.89 100.22 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 760.5 110.6 0 19 3 -bam ",
		label=bam,
		lp="760.5,112.5",
		pos="e,775.72,99.478 707.33,125.5 724.66,118.91 748.87,109.7 767.91,102.45"];
	transcript_to_gene -> gene_abundance	[_draw_="c 7 -#000000 B 4 355 80.71 355 75.59 355 68.85 355 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 357.45 62.78 355 55.78 352.55 62.78 ",
		pos="e,355,54.265 355,80.709 355,75.593 355,68.848 355,62.666"];
	stringtie -> stringtie_transcript_gtf	[_draw_="c 7 -#000000 B 4 795.69 80.71 794.23 75.47 792.29 68.53 790.53 62.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 792.95 61.81 788.71 55.72 788.24 63.12 ",
		pos="e,788.31,54.265 795.69,80.709 794.23,75.474 792.29,68.534 790.53,62.235"];
	stringtie -> stringtie_gene_expression_tsv	[_draw_="c 7 -#000000 B 4 825.46 80.5 847.26 73.76 877.9 64.28 901.55 56.97 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 902.19 59.33 908.15 54.93 900.74 54.65 ",
		pos="e,909.6,54.478 825.46,80.505 847.26,73.761 877.9,64.284 901.55,56.967"];
	index_bam -> generate_qc_metrics	[_draw_="c 7 -#000000 B 7 810.94 125.61 816.49 119.55 824.83 111.8 834 108 861.96 96.41 936.11 92.54 993.71 91.33 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 993.62 93.79 1000.57 91.2 993.53 88.89 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 843.5 110.6 0 19 3 -bam ",
		label=bam,
		lp="843.5,112.5",
		pos="e,1002.1,91.174 810.94,125.61 816.49,119.55 824.83,111.8 834,108 861.96,96.406 936.11,92.535 993.71,91.333"];
	kallisto -> fusion_evidence	[_draw_="c 7 -#000000 B 4 457 125.56 457 111.14 457 81.48 457 62.73 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 459.45 62.8 457 55.8 454.55 62.8 ",
		pos="e,457,54.284 457,125.56 457,111.14 457,81.476 457,62.727"];
	kallisto -> transcript_abundance_h5	[_draw_="c 7 -#000000 B 4 468.7 125.56 490.07 110.15 535.55 77.34 560.93 59.04 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 562.04 61.25 566.29 55.17 559.18 57.28 ",
		pos="e,567.52,54.284 468.7,125.56 490.07,110.15 535.55,77.342 560.93,59.036"];
	kallisto -> transcript_abundance_tsv	[_draw_="c 7 -#000000 B 7 412.74 132.88 375.74 130.25 322.64 122.43 282 100 264.85 90.54 249.9 73.54 240.48 61.14 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 242.6 59.89 236.5 55.68 238.65 62.78 ",
		pos="e,235.6,54.459 412.74,132.88 375.74,130.25 322.64,122.43 282,100 264.85,90.537 249.9,73.542 240.48,61.139"];
	kallisto -> transcript_to_gene	[_draw_="c 7 -#000000 B 7 412.9 131.09 399.61 128.66 385.51 124.39 374 117 369.83 114.32 366.26 110.37 363.39 106.36 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 365.57 105.23 359.78 100.61 361.42 107.84 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 413.5 110.6 0 79 19 -transcript_table_h5 ",
		label=transcript_table_h5,
		lp="413.5,112.5",
		pos="e,358.97,99.324 412.9,131.09 399.61,128.66 385.51,124.39 374,117 369.83,114.32 366.26,110.37 363.39,106.36"];
	bam_to_trimmed_fastq_and_hisat_alignments -> merge	[_draw_="c 7 -#000000 B 4 797.23 215.71 796.75 210.59 796.13 203.85 795.55 197.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 798 197.52 794.91 190.77 793.12 197.97 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 807.5 200.6 0 23 4 -bams ",
		label=bams,
		lp="807.5,202.5",
		pos="e,794.77,189.27 797.23,215.71 796.75,210.59 796.13,203.85 795.55,197.67"];
	bam_to_trimmed_fastq_and_hisat_alignments -> kallisto	[_draw_="c 7 -#000000 B 13 731.52 215.53 697.36 210.14 655.38 201.9 619 190 599.35 183.57 596.33 177.33 577 170 551.48 160.32 544.26 160.44 \
518 153 510.7 150.93 502.9 148.74 495.4 146.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 496.28 144.35 488.88 144.83 494.96 149.07 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 632 178.1 0 26 6 -fastqs ",
		label=fastqs,
		lp="632,180",
		pos="e,487.42,144.42 731.52,215.53 697.36,210.14 655.38,201.9 619,190 599.35,183.57 596.33,177.33 577,170 551.48,160.32 544.26,160.44 \
518,153 510.7,150.93 502.9,148.74 495.4,146.65"];
	generate_qc_metrics -> chart	[_draw_="c 7 -#000000 B 4 1064.18 80.71 1061 75.24 1056.73 67.9 1052.94 61.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1055.2 60.39 1049.57 55.57 1050.97 62.86 ",
		pos="e,1048.8,54.265 1064.2,80.709 1061,75.236 1056.7,67.899 1052.9,61.381"];
	generate_qc_metrics -> metrics	[_draw_="c 7 -#000000 B 4 1074.01 80.71 1077.32 75.24 1081.76 67.9 1085.7 61.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1087.69 62.82 1089.22 55.56 1083.5 60.28 ",
		pos="e,1090,54.265 1074,80.709 1077.3,75.236 1081.8,67.899 1085.7,61.381"];
	default1	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 646.5 170.5 646.5 189.5 723.5 189.5 723.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 685 177.5 0 61 12 -\"coordinate\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"coordinate\"",
		pos="685,180",
		rects="646.5,170.5,723.5,189.5",
		width=1.0694];
	default1 -> mark_dup	[_draw_="c 7 -#000000 B 4 685 170.71 685 165.59 685 158.85 685 152.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 687.45 152.78 685 145.78 682.55 152.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 718.5 155.6 0 67 16 -input_sort_order ",
		label=input_sort_order,
		lp="718.5,157.5",
		pos="e,685,144.27 685,170.71 685,165.59 685,158.85 685,152.67"];
}