digraph workflow {
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		dpi=96,
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		height=0,
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		shape=record,
		style=filled,
		width=0
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	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
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	subgraph cluster_inputs {
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			lheight=0.15,
			lp="58,260.5",
			lwidth=1.17,
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		intervals	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16.5 223.5 16.5 242.5 75.5 242.5 75.5 223.5 ",
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			width=0.81944];
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			rects="476.5,223.5,643.5,242.5",
			width=2.3194];
		downsample_seed	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 647.5 223.5 647.5 242.5 754.5 242.5 754.5 223.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 701 230.5 0 91 15 -downsample_seed ",
			fillcolor="#94DDF4",
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			rects="647.5,223.5,754.5,242.5",
			width=1.4861];
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			fillcolor="#94DDF4",
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			label=reference,
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			width=0.875];
		variant_index_parameter	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 826 223.5 826 242.5 966 242.5 966 223.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 896 230.5 0 124 23 -variant_index_parameter ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=variant_index_parameter,
			pos="896,233",
			rects="826,223.5,966,242.5",
			width=1.9444];
		emit_reference_confidence	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 970.5 223.5 970.5 242.5 1119.5 242.5 1119.5 223.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1045 230.5 0 133 25 -emit_reference_confidence ",
			fillcolor="#94DDF4",
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			rects="970.5,223.5,1119.5,242.5",
			width=2.0694];
		read_filter	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1124 223.5 1124 242.5 1190 242.5 1190 223.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1157 230.5 0 50 11 -read_filter ",
			fillcolor="#94DDF4",
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			label=read_filter,
			pos="1157,233",
			rects="1124,223.5,1190,242.5",
			width=0.91667];
		crams_to_downsample	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1323.5 223.5 1323.5 242.5 1452.5 242.5 1452.5 223.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1388 230.5 0 113 19 -crams_to_downsample ",
			fillcolor="#94DDF4",
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			label=crams_to_downsample,
			pos="1388,233",
			rects="1323.5,223.5,1452.5,242.5",
			width=1.7917];
		max_alternate_alleles	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1194.5 223.5 1194.5 242.5 1319.5 242.5 1319.5 223.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1257 230.5 0 109 21 -max_alternate_alleles ",
			fillcolor="#94DDF4",
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			pos="1257,233",
			rects="1194.5,223.5,1319.5,242.5",
			width=1.7361];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 1059 8 1059 63 1177 63 1177 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 1113 15 0 92 16 -Workflow Outputs ",
			bb="1059,8,1177,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="1113,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		result_directories	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1067.5 35.5 1067.5 54.5 1168.5 54.5 1168.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1118 42.5 0 85 18 -result_directories ",
			fillcolor="#94DDF4",
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			label=result_directories,
			pos="1118,45",
			rects="1067.5,35.5,1168.5,54.5",
			width=1.4028];
	}
	downsample_and_recall	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 698.5 170.5 698.5 189.5 881.5 189.5 881.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 790 177.5 0 167 30 -Downsample and HaplotypeCaller ",
		fillcolor="#F3CEA1",
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		label="Downsample and HaplotypeCaller",
		pos="790,180",
		rects="698.5,170.5,881.5,189.5",
		width=2.5417];
	intervals -> downsample_and_recall	[_draw_="c 7 -#000000 B 10 60.51 223.61 66.39 220.51 73.36 217.22 80 215 119.86 201.69 131.21 202.37 173 198 270.21 187.84 542.19 183.53 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 690.28 184.34 697.26 181.81 690.23 179.44 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 191 200.6 0 36 9 -intervals ",
		label=intervals,
		lp="191,202.5",
		pos="e,698.77,181.8 60.505,223.61 66.395,220.51 73.365,217.22 80,215 119.86,201.69 131.21,202.37 173,198 270.21,187.84 542.19,183.53 \
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	qc_minimum_base_quality -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 170.08 223.59 186.79 215.33 213.95 203.23 239 198 281.76 189.08 543.71 184.24 690.51 182.19 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 690.23 184.65 697.2 182.1 690.16 179.75 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 292.5 200.6 0 107 23 -qc_minimum_base_quality ",
		label=qc_minimum_base_quality,
		lp="292.5,202.5",
		pos="e,698.71,182.08 170.08,223.59 186.79,215.33 213.95,203.23 239,198 281.76,189.08 543.71,184.24 690.51,182.19"];
	downsample_strategy -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 310.08 223.63 325.77 215.41 351.3 203.34 375 198 432.79 184.99 587.34 181.68 690.65 180.97 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 690.43 183.43 697.41 180.93 690.4 178.53 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 420.5 200.6 0 91 19 -downsample_strategy ",
		label=downsample_strategy,
		lp="420.5,202.5",
		pos="e,698.93,180.92 310.08,223.63 325.77,215.41 351.3,203.34 375,198 432.79,184.99 587.34,181.68 690.65,180.97"];
	variant_index_type -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 431.77 223.55 446.87 215.39 471.27 203.48 494 198 530.08 189.3 619.42 185.01 690.58 182.92 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 690.28 185.38 697.21 182.73 690.14 180.48 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 532 200.6 0 76 18 -variant_index_type ",
		label=variant_index_type,
		lp="532,202.5",
		pos="e,698.72,182.69 431.77,223.55 446.87,215.39 471.27,203.48 494,198 530.08,189.3 619.42,185.01 690.58,182.92"];
	qc_minimum_mapping_quality -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 562.65 223.69 565.7 215.63 571.53 203.8 581 198 590.76 192.03 641.34 187.82 690.3 185.09 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 690.4 187.53 697.26 184.71 690.14 182.64 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 642.5 200.6 0 123 26 -qc_minimum_mapping_quality ",
		label=qc_minimum_mapping_quality,
		lp="642.5,202.5",
		pos="e,698.77,184.63 562.65,223.69 565.7,215.63 571.53,203.8 581,198 590.76,192.03 641.34,187.82 690.3,185.09"];
	downsample_seed -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 701.41 223.76 702.25 215.99 704.74 204.58 712 198 713.78 196.39 715.68 194.91 717.67 193.57 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 718.61 195.85 723.45 190.23 716.16 191.61 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 750.5 200.6 0 77 15 -downsample_seed ",
		label=downsample_seed,
		lp="750.5,202.5",
		pos="e,724.76,189.48 701.41,223.76 702.25,215.99 704.74,204.58 712,198 713.78,196.39 715.68,194.91 717.67,193.57"];
	reference -> downsample_and_recall	[_draw_="c 7 -#000000 B 4 790 223.58 790 216.52 790 206.24 790 197.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 792.45 197.78 790 190.78 787.55 197.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 810 200.6 0 40 9 -reference ",
		label=reference,
		lp="810,202.5",
		pos="e,790,189.26 790,223.58 790,216.52 790,206.24 790,197.55"];
	variant_index_parameter -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 880.7 223.5 867.65 216.38 848.3 206.09 831 198 827.17 196.21 823.1 194.41 819.07 192.68 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 820.23 190.51 812.83 190.05 818.34 195.03 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 899.5 200.6 0 101 23 -variant_index_parameter ",
		label=variant_index_parameter,
		lp="899.5,202.5",
		pos="e,811.44,189.47 880.7,223.5 867.65,216.38 848.3,206.09 831,198 827.17,196.21 823.1,194.41 819.07,192.68"];
	emit_reference_confidence -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 1025.97 223.57 1007.27 215.66 977.72 204.15 951 198 931.38 193.49 910.13 190.17 889.71 187.73 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 890.06 185.3 882.82 186.94 889.5 190.17 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1036 200.6 0 112 25 -emit_reference_confidence ",
		label=emit_reference_confidence,
		lp="1036,202.5",
		pos="e,881.32,186.77 1026,223.57 1007.3,215.66 977.72,204.15 951,198 931.38,193.49 910.13,190.17 889.71,187.73"];
	read_filter -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 1144.93 223.53 1132.54 215.34 1112.39 203.41 1093 198 1056.05 187.69 963.07 183.6 889.78 182 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 889.96 179.56 882.91 181.86 889.86 184.46 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1136 200.6 0 42 11 -read_filter ",
		label=read_filter,
		lp="1136,202.5",
		pos="e,881.4,181.83 1144.9,223.53 1132.5,215.34 1112.4,203.41 1093,198 1056,187.69 963.07,183.6 889.78,182"];
	crams_to_downsample -> downsample_and_recall	[_draw_="c 7 -#000000 B 10 1354.17 223.55 1325.17 216.3 1288.05 207.02 1288 207 1281.6 204.1 1281.67 200.21 1275 198 1239.58 186.25 1020.9 \
182.62 889.58 181.5 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 889.98 179.05 882.96 181.45 889.94 183.95 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1335 200.6 0 94 19 -crams_to_downsample ",
		label=crams_to_downsample,
		lp="1335,202.5",
		pos="e,881.44,181.43 1354.2,223.55 1325.2,216.3 1288,207.02 1288,207 1281.6,204.1 1281.7,200.21 1275,198 1239.6,186.25 1020.9,182.62 \
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	gather_results	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1075 80.5 1075 99.5 1161 99.5 1161 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1118 87.5 0 70 14 -gather_results ",
		height=0.27778,
		label=gather_results,
		pos="1118,90",
		rects="1075,80.5,1161,99.5",
		width=1.1944];
	crams_to_downsample -> gather_results	[_draw_="c 7 -#000000 B 7 1387.83 223.77 1387.25 216.22 1385.28 205.16 1379 198 1324.4 135.77 1228.1 109.07 1168.98 98.11 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1169.7 95.75 1162.38 96.93 1168.84 100.57 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1349.5 155.6 0 25 6 -outdir ",
		label=outdir,
		lp="1349.5,157.5",
		pos="e,1160.9,96.666 1387.8,223.77 1387.3,216.22 1385.3,205.16 1379,198 1324.4,135.77 1228.1,109.07 1169,98.111"];
	max_alternate_alleles -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 1233.56 223.56 1206.75 213.97 1165.59 199.45 1158 198 1108.58 188.57 980.9 184.31 889.82 182.43 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 889.97 179.98 882.92 182.29 889.87 184.88 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1229 200.6 0 90 21 -max_alternate_alleles ",
		label=max_alternate_alleles,
		lp="1229,202.5",
		pos="e,881.41,182.26 1233.6,223.56 1206.8,213.97 1165.6,199.45 1158,198 1108.6,188.57 980.9,184.31 889.82,182.43"];
	join_results	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 813.5 125.5 813.5 144.5 886.5 144.5 886.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 850 132.5 0 57 12 -join_results ",
		height=0.27778,
		label=join_results,
		pos="850,135",
		rects="813.5,125.5,886.5,144.5",
		width=1.0139];
	downsample_and_recall -> join_results	[_draw_="c 7 -#000000 B 7 829.84 170.53 834.34 168.32 838.54 165.52 842 162 844.61 159.35 846.37 155.87 847.55 152.32 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 849.88 153.12 849.07 145.75 845.11 152.01 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 858 155.6 0 22 5 -gvcfs ",
		label=gvcfs,
		lp="858,157.5",
		pos="e,849.42,144.27 829.84,170.53 834.34,168.32 838.54,165.52 842,162 844.61,159.35 846.37,155.87 847.55,152.32"];
	downsample_and_recall -> join_results	[_draw_="c 7 -#000000 B 7 787.65 170.93 786.55 165.34 786.19 158.04 790 153 793.99 147.72 799.51 143.99 805.58 141.37 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 806.27 143.73 812.08 139.12 804.66 139.1 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 815.5 155.6 0 51 11 -wgs_metrics ",
		label=wgs_metrics,
		lp="815.5,157.5",
		pos="e,813.51,138.62 787.65,170.93 786.55,165.34 786.19,158.04 790,153 793.99,147.72 799.51,143.99 805.58,141.37"];
	gather_results -> result_directories	[_draw_="c 7 -#000000 B 4 1118 80.71 1118 75.59 1118 68.85 1118 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1120.45 62.78 1118 55.78 1115.55 62.78 ",
		pos="e,1118,54.265 1118,80.709 1118,75.593 1118,68.848 1118,62.666"];
	join_results -> gather_results	[_draw_="c 7 -#000000 B 4 886.42 128.16 933.02 120.68 1014 107.69 1066.79 99.22 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1066.99 101.67 1073.51 98.14 1066.21 96.83 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1017 110.6 0 18 5 -files ",
		label=files,
		lp="1017,112.5",
		pos="e,1075,97.898 886.42,128.16 933.02,120.68 1014,107.69 1066.8,99.217"];
}
