digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 233 1260 233 1260 0 ",
		bb="0,0,1260,233",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
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		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
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	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
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	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 170 8 225 1252 225 1252 170 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 213 0 84 15 -Workflow Inputs ",
			bb="8,170,1252,225",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,215.5",
			lwidth=1.17,
			rank=same,
			style=dashed
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		qc_minimum_base_quality	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 188 178.5 188 197.5 336 197.5 336 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 262 185.5 0 132 23 -qc_minimum_base_quality ",
			fillcolor="#94DDF4",
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			label=qc_minimum_base_quality,
			pos="262,188",
			rects="188,178.5,336,197.5",
			width=2.0556];
		downsample_seed	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 340.5 178.5 340.5 197.5 447.5 197.5 447.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 394 185.5 0 91 15 -downsample_seed ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=downsample_seed,
			pos="394,188",
			rects="340.5,178.5,447.5,197.5",
			width=1.4861];
		read_filter	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1126 178.5 1126 197.5 1192 197.5 1192 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1159 185.5 0 50 11 -read_filter ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=read_filter,
			pos="1159,188",
			rects="1126,178.5,1192,197.5",
			width=0.91667];
		qc_minimum_mapping_quality	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16.5 178.5 16.5 197.5 183.5 197.5 183.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 100 185.5 0 151 26 -qc_minimum_mapping_quality ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=qc_minimum_mapping_quality,
			pos="100,188",
			rects="16.5,178.5,183.5,197.5",
			width=2.3194];
		reference	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 451.5 178.5 451.5 197.5 514.5 197.5 514.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 483 185.5 0 47 9 -reference ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=reference,
			pos="483,188",
			rects="451.5,178.5,514.5,197.5",
			width=0.875];
		downsample_strategy	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 518.5 178.5 518.5 197.5 643.5 197.5 643.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 581 185.5 0 109 19 -downsample_strategy ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=downsample_strategy,
			pos="581,188",
			rects="518.5,178.5,643.5,197.5",
			width=1.7361];
		ploidy	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1196.5 178.5 1196.5 197.5 1243.5 197.5 1243.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1220 185.5 0 31 6 -ploidy ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=ploidy,
			pos="1220,188",
			rects="1196.5,178.5,1243.5,197.5",
			width=0.65278];
		intervals	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 780.5 178.5 780.5 197.5 839.5 197.5 839.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 810 185.5 0 43 9 -intervals ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=intervals,
			pos="810,188",
			rects="780.5,178.5,839.5,197.5",
			width=0.81944];
		max_alternate_alleles	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 843.5 178.5 843.5 197.5 968.5 197.5 968.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 906 185.5 0 109 21 -max_alternate_alleles ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=max_alternate_alleles,
			pos="906,188",
			rects="843.5,178.5,968.5,197.5",
			width=1.7361];
		crams_to_downsample	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 647.5 178.5 647.5 197.5 776.5 197.5 776.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 712 185.5 0 113 19 -crams_to_downsample ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=crams_to_downsample,
			pos="712,188",
			rects="647.5,178.5,776.5,197.5",
			width=1.7917];
		emit_reference_confidence	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 972.5 178.5 972.5 197.5 1121.5 197.5 1121.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1047 185.5 0 133 25 -emit_reference_confidence ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=emit_reference_confidence,
			pos="1047,188",
			rects="972.5,178.5,1121.5,197.5",
			width=2.0694];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 570 8 570 63 712 63 712 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 624 15 0 92 16 -Workflow Outputs ",
			bb="570,8,712,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="624,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		wgs_metrics	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 578 35.5 578 54.5 656 54.5 656 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 617 42.5 0 62 11 -wgs_metrics ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=wgs_metrics,
			pos="617,45",
			rects="578,35.5,656,54.5",
			width=1.0833];
		gvcfs	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 660.5 35.5 660.5 54.5 703.5 54.5 703.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 682 42.5 0 27 5 -gvcfs ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=gvcfs,
			pos="682,45",
			rects="660.5,35.5,703.5,54.5",
			width=0.59722];
	}
	collect_wgs_metrics	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 459.5 80.5 459.5 99.5 574.5 99.5 574.5 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 517 87.5 0 99 19 -collect WGS metrics ",
		height=0.27778,
		label="collect WGS metrics",
		pos="517,90",
		rects="459.5,80.5,574.5,99.5",
		width=1.5972];
	qc_minimum_base_quality -> collect_wgs_metrics	[_draw_="c 7 -#000000 B 7 272.35 178.58 289.38 165.18 324.81 139.07 359 125 388.29 112.95 422.47 104.91 451.54 99.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 451.62 102.17 458.1 98.56 450.78 97.34 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 406 133.1 0 94 20 -minimum_base_quality ",
		label=minimum_base_quality,
		lp="406,135",
		pos="e,459.59,98.3 272.35,178.58 289.38,165.18 324.81,139.07 359,125 388.29,112.95 422.47,104.91 451.54,99.697"];
	downsample	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 550.5 125.5 550.5 144.5 705.5 144.5 705.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 628 132.5 0 139 24 -downsample unaligned BAM ",
		height=0.27778,
		label="downsample unaligned BAM",
		pos="628,135",
		rects="550.5,125.5,705.5,144.5",
		width=2.1528];
	downsample_seed -> downsample	[_draw_="c 7 -#000000 B 7 408.69 178.61 423.44 170.61 447.06 158.93 469 153 500.15 144.58 510.78 148.07 543.4 145.29 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 543.45 147.75 550.18 144.64 542.98 142.87 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 497 155.6 0 56 11 -random_seed ",
		label=random_seed,
		lp="497,157.5",
		pos="e,551.69,144.5 408.69,178.61 423.44,170.61 447.06,158.93 469,153 500.15,144.58 510.78,148.07 543.4,145.29"];
	haplotype_caller	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 651 80.5 651 99.5 883 99.5 883 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 767 87.5 0 216 43 -scatter GATK HaplotypeCaller over intervals ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="scatter GATK HaplotypeCaller over intervals",
		pos="767,90",
		rects="651,80.5,883,99.5",
		width=3.2222];
	read_filter -> haplotype_caller	[_draw_="c 7 -#000000 B 7 1155.38 178.82 1148.78 165.02 1133.39 137.39 1111 125 1074.06 104.57 973.85 96.33 891.06 93.04 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 891.19 90.6 884.1 92.78 891.01 95.49 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1155 133.1 0 42 11 -read_filter ",
		label=read_filter,
		lp="1155,135",
		pos="e,882.59,92.724 1155.4,178.82 1148.8,165.02 1133.4,137.39 1111,125 1074.1,104.57 973.85,96.325 891.06,93.044"];
	qc_minimum_mapping_quality -> collect_wgs_metrics	[_draw_="c 7 -#000000 B 7 111.28 178.66 130.58 164.87 171.69 137.59 211 125 291.14 99.33 388.44 92.37 451.48 90.82 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 451.3 93.28 458.25 90.68 451.2 88.38 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 265.5 133.1 0 109 23 -minimum_mapping_quality ",
		label=minimum_mapping_quality,
		lp="265.5,135",
		pos="e,459.76,90.645 111.28,178.66 130.58,164.87 171.69,137.59 211,125 291.14,99.327 388.44,92.372 451.48,90.822"];
	reference -> downsample	[_draw_="c 7 -#000000 B 7 496.22 178.55 508.82 170.85 528.55 159.69 547 153 553.94 150.48 561.37 148.29 568.79 146.4 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 569.13 148.84 575.36 144.81 567.98 144.07 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 567 155.6 0 40 9 -reference ",
		label=reference,
		lp="567,157.5",
		pos="e,576.83,144.46 496.22,178.55 508.82,170.85 528.55,159.69 547,153 553.94,150.48 561.37,148.29 568.79,146.4"];
	reference -> collect_wgs_metrics	[_draw_="c 7 -#000000 B 7 486 178.64 489.04 170.16 493.86 156.68 498 145 502.51 132.29 507.58 117.88 511.34 107.14 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 513.54 108.27 513.55 100.85 508.92 106.65 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 524 133.1 0 40 9 -reference ",
		label=reference,
		lp="524,135",
		pos="e,514.05,99.422 486,178.64 489.04,170.16 493.86,156.68 498,145 502.51,132.29 507.58,117.88 511.34,107.14"];
	reference -> haplotype_caller	[_draw_="c 7 -#000000 B 7 474.48 178.67 462.64 166.06 444.02 141.81 457 125 468.68 109.88 561.72 101.09 642.86 96.26 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 642.81 98.71 649.66 95.86 642.53 93.82 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 477 133.1 0 40 9 -reference ",
		label=reference,
		lp="477,135",
		pos="e,651.17,95.774 474.48,178.67 462.64,166.06 444.02,141.81 457,125 468.68,109.88 561.72,101.09 642.86,96.258"];
	downsample_strategy -> downsample	[_draw_="c 7 -#000000 B 7 582.43 178.54 584.09 171.05 587.47 160.21 594 153 595.26 151.61 596.66 150.32 598.15 149.12 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 599.42 151.22 603.89 145.3 596.7 147.14 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 611 155.6 0 34 8 -strategy ",
		label=strategy,
		lp="611,157.5",
		pos="e,605.15,144.46 582.43,178.54 584.09,171.05 587.47,160.21 594,153 595.26,151.61 596.66,150.32 598.15,149.12"];
	ploidy -> haplotype_caller	[_draw_="c 7 -#000000 B 7 1216.72 178.56 1210.94 164.88 1197.56 138.07 1177 125 1153.22 109.88 1002.97 100.48 891.21 95.5 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 891.5 93.06 884.4 95.2 891.29 97.95 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1209.5 133.1 0 25 6 -ploidy ",
		label=ploidy,
		lp="1209.5,135",
		pos="e,882.89,95.13 1216.7,178.56 1210.9,164.88 1197.6,138.07 1177,125 1153.2,109.88 1003,100.48 891.21,95.496"];
	intervals -> haplotype_caller	[_draw_="c 7 -#000000 B 7 812.37 178.86 815.49 166.5 819.64 142.59 811 125 806.76 116.38 799.17 109.32 791.47 103.91 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 792.95 101.95 785.74 100.23 790.31 106.07 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 833 133.1 0 36 9 -intervals ",
		label=intervals,
		lp="833,135",
		pos="e,784.46,99.415 812.37,178.86 815.49,166.5 819.64,142.59 811,125 806.76,116.38 799.17,109.32 791.47,103.91"];
	max_alternate_alleles -> haplotype_caller	[_draw_="c 7 -#000000 B 7 900.67 178.65 891.94 165.58 873.42 140.2 852 125 838.09 115.13 820.91 107.56 805.65 102.1 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 806.71 99.87 799.3 99.92 805.12 104.51 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 919 133.1 0 90 21 -max_alternate_alleles ",
		label=max_alternate_alleles,
		lp="919,135",
		pos="e,797.86,99.43 900.67,178.65 891.94,165.58 873.42,140.2 852,125 838.09,115.13 820.91,107.56 805.65,102.1"];
	crams_to_downsample -> downsample	[_draw_="c 7 -#000000 B 7 705.55 178.64 699.26 171 689.06 159.88 678 153 674.8 151.01 671.35 149.22 667.8 147.62 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 668.74 145.36 661.34 144.99 666.89 149.9 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 698 155.6 0 18 3 -sam ",
		label=sam,
		lp="698,157.5",
		pos="e,659.94,144.41 705.55,178.64 699.26,171 689.06,159.88 678,153 674.8,151.01 671.35,149.22 667.8,147.62"];
	crams_to_downsample -> downsample	[_draw_="c 7 -#000000 B 7 672.8 178.57 655.87 174.15 638.64 168.34 633 162 630.66 159.37 629.27 155.99 628.48 152.54 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 630.93 152.39 627.69 145.72 626.06 152.95 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 655 155.6 0 44 11 -probability ",
		label=probability,
		lp="655,157.5",
		pos="e,627.51,144.22 672.8,178.57 655.87,174.15 638.64,168.34 633,162 630.66,159.37 629.27,155.99 628.48,152.54"];
	crams_to_downsample -> haplotype_caller	[_draw_="c 7 -#000000 B 7 710.16 178.72 707.85 166.18 705.25 142.02 715 125 720.23 115.86 729.04 108.74 737.94 103.44 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 739.04 105.63 744.02 100.13 736.7 101.32 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 762.5 133.1 0 95 22 -contamination_fraction ",
		label=contamination_fraction,
		lp="762.5,135",
		pos="e,745.35,99.406 710.16,178.72 707.85,166.18 705.25,142.02 715,125 720.23,115.86 729.04,108.74 737.94,103.44"];
	emit_reference_confidence -> haplotype_caller	[_draw_="c 7 -#000000 B 7 1038.79 178.59 1024.95 164.94 995.46 138.19 965 125 938.56 113.55 908.58 105.95 880.08 100.91 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 880.49 98.49 873.18 99.74 879.67 103.32 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1054 133.1 0 112 25 -emit_reference_confidence ",
		label=emit_reference_confidence,
		lp="1054,135",
		pos="e,871.69,99.486 1038.8,178.59 1024.9,164.94 995.46,138.19 965,125 938.56,113.55 908.58,105.95 880.08,100.91"];
	downsample -> collect_wgs_metrics	[_draw_="c 7 -#000000 B 7 556 125.57 545.03 123.28 535.78 120.45 531 117 527.5 114.47 524.78 110.79 522.72 106.98 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 525.02 106.14 519.96 100.73 520.54 108.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 560 110.6 0 58 11 -sample_name ",
		label=sample_name,
		lp="560,112.5",
		pos="e,519.34,99.341 556,125.57 545.03,123.28 535.78,120.45 531,117 527.5,114.47 524.78,110.79 522.72,106.98"];
	downsample -> collect_wgs_metrics	[_draw_="c 7 -#000000 B 7 614.93 125.78 603.19 118.41 587.56 108.66 586 108 580.45 105.67 574.51 103.6 568.52 101.8 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 569.23 99.45 561.83 99.9 567.89 104.16 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 609.5 110.6 0 19 3 -bam ",
		label=bam,
		lp="609.5,112.5",
		pos="e,560.37,99.484 614.93,125.78 603.19,118.41 587.56,108.66 586,108 580.45,105.67 574.51,103.6 568.52,101.8"];
	downsample -> haplotype_caller	[_draw_="c 7 -#000000 B 7 625.79 125.69 624.82 120 624.72 112.66 629 108 631.99 104.74 636.96 102.07 643.27 99.88 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 643.79 102.28 649.81 97.95 642.4 97.58 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 656.5 110.6 0 55 13 -output_prefix ",
		label=output_prefix,
		lp="656.5,112.5",
		pos="e,651.26,97.527 625.79,125.69 624.82,120 624.72,112.66 629,108 631.99,104.74 636.96,102.07 643.27,99.88"];
	downsample -> haplotype_caller	[_draw_="c 7 -#000000 B 10 660.36 125.51 667.35 123.16 674.56 120.33 681 117 686.92 113.94 686.95 110.81 693 108 698.06 105.65 703.47 103.61 \
708.98 101.85 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 709.61 104.22 715.63 99.88 708.22 99.52 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 702.5 110.6 0 19 3 -bam ",
		label=bam,
		lp="702.5,112.5",
		pos="e,717.08,99.455 660.36,125.51 667.35,123.16 674.56,120.33 681,117 686.92,113.94 686.95,110.81 693,108 698.06,105.65 703.47,103.61 \
708.98,101.85"];
	collect_wgs_metrics -> wgs_metrics	[_draw_="c 7 -#000000 B 4 536.76 80.5 551.82 74.03 572.76 65.02 589.47 57.84 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 590.43 60.09 595.89 55.08 588.5 55.59 ",
		pos="e,597.28,54.478 536.76,80.505 551.82,74.026 572.76,65.024 589.47,57.84"];
	haplotype_caller -> gvcfs	[_draw_="c 7 -#000000 B 4 750.21 80.5 737.63 74.14 720.25 65.35 706.18 58.23 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 707.46 56.13 700.11 55.16 705.25 60.51 ",
		pos="e,698.76,54.478 750.21,80.505 737.63,74.144 720.25,65.351 706.18,58.233"];
}