digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 458 522 458 522 0 ",
		bb="0,0,522,458",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
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	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 395 8 450 514 450 514 395 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 438 0 84 15 -Workflow Inputs ",
			bb="8,395,514,450",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,440.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		docm_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 98 403.5 98 422.5 162 422.5 162 403.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 130 410.5 0 48 8 -docm_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=docm_vcf,
			pos="130,413",
			rects="98,403.5,162,422.5",
			width=0.88889];
		reference	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 166.5 403.5 166.5 422.5 229.5 422.5 229.5 403.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 198 410.5 0 47 9 -reference ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=reference,
			pos="198,413",
			rects="166.5,403.5,229.5,422.5",
			width=0.875];
		interval_list	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 234 403.5 234 422.5 308 422.5 308 403.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 271 410.5 0 58 13 -interval_list ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=interval_list,
			pos="271,413",
			rects="234,403.5,308,422.5",
			width=1.0278];
		normal_bam	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16 403.5 16 422.5 94 422.5 94 403.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 55 410.5 0 62 10 -normal_bam ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=normal_bam,
			pos="55,413",
			rects="16,403.5,94,422.5",
			width=1.0833];
		filter_docm_variants	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 390 403.5 390 422.5 506 422.5 506 403.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 448 410.5 0 100 20 -filter_docm_variants ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=filter_docm_variants,
			pos="448,413",
			rects="390,403.5,506,422.5",
			width=1.6111];
		tumor_bam	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 312.5 403.5 312.5 422.5 385.5 422.5 385.5 403.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 349 410.5 0 57 9 -tumor_bam ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=tumor_bam,
			pos="349,413",
			rects="312.5,403.5,385.5,422.5",
			width=1.0139];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 262 8 262 63 388 63 388 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 316 15 0 92 16 -Workflow Outputs ",
			bb="262,8,388,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="316,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		docm_variants_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 270.5 35.5 270.5 54.5 379.5 54.5 379.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 325 42.5 0 93 17 -docm_variants_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=docm_variants_vcf,
			pos="325,45",
			rects="270.5,35.5,379.5,54.5",
			width=1.5139];
	}
	GATK_haplotype_caller	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 124 350.5 124 369.5 274 369.5 274 350.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 199 357.5 0 134 26 -HaplotypeCaller (GATK 3.6) ",
		height=0.27778,
		label="HaplotypeCaller (GATK 3.6)",
		pos="199,360",
		rects="124,350.5,274,369.5",
		width=2.0833];
	docm_vcf -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 135.09 403.74 140.11 396.17 148.41 385.1 158 378 160.43 376.2 163.09 374.55 165.84 373.05 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 166.68 375.36 171.89 370.08 164.52 370.96 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 177.5 380.6 0 39 8 -docm_vcf ",
		label=docm_vcf,
		lp="177.5,382.5",
		pos="e,173.25,369.41 135.09,403.74 140.11,396.17 148.41,385.1 158,378 160.43,376.2 163.09,374.55 165.84,373.05"];
	reference -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 4 198.17 403.58 198.3 396.52 198.51 386.24 198.68 377.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 201.12 377.82 198.81 370.78 196.22 377.73 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 218 380.6 0 40 9 -reference ",
		label=reference,
		lp="218,382.5",
		pos="e,198.84,369.26 198.17,403.58 198.3,396.52 198.51,386.24 198.68,377.55"];
	interval_list -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 264.69 403.51 258.74 395.99 249.24 385.14 239 378 236.44 376.21 233.65 374.56 230.79 373.04 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 231.85 370.83 224.48 370 229.73 375.25 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 272.5 380.6 0 47 13 -interval_list ",
		label=interval_list,
		lp="272.5,382.5",
		pos="e,223.12,369.35 264.69,403.51 258.74,395.99 249.24,385.14 239,378 236.44,376.21 233.65,374.56 230.79,373.04"];
	normal_bam -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 62.58 403.53 70.2 395.59 82.71 384.06 96 378 102.34 375.11 109.1 372.7 116.01 370.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 116.58 373.08 122.71 368.92 115.32 368.35 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 121.5 380.6 0 51 10 -normal_bam ",
		label=normal_bam,
		lp="121.5,382.5",
		pos="e,124.17,368.53 62.581,403.53 70.205,395.59 82.707,384.06 96,378 102.34,375.11 109.1,372.7 116.01,370.7"];
	docm_filter	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 222.5 170.5 222.5 189.5 427.5 189.5 427.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 325 177.5 0 189 38 -Filter variants from the DoCM detector ",
		height=0.27778,
		label="Filter variants from the DoCM detector",
		pos="325,180",
		rects="222.5,170.5,427.5,189.5",
		width=2.8472];
	normal_bam -> docm_filter	[_draw_="c 7 -#000000 B 10 57.89 403.81 61.15 393.84 66 376.4 66 361 66 361 66 361 66 224 66 207.98 144.11 196.59 214.53 189.57 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 214.4 192.05 221.13 188.93 213.92 187.17 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 91.5 290.6 0 51 10 -normal_bam ",
		label=normal_bam,
		lp="91.5,292.5",
		pos="e,222.64,188.78 57.89,403.81 61.149,393.84 66,376.4 66,361 66,361 66,361 66,224 66,207.98 144.11,196.59 214.53,189.57"];
	filter_docm_variants -> docm_filter	[_draw_="c 7 -#000000 B 10 441.47 403.5 434.67 393.78 425 377.12 425 361 425 361 425 361 425 224 425 208.93 415.3 199.08 401.94 192.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 402.98 190.43 395.58 190.01 401.1 194.96 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 466 290.6 0 82 20 -filter_docm_variants ",
		label=filter_docm_variants,
		lp="466,292.5",
		pos="e,394.18,189.43 441.47,403.5 434.67,393.78 425,377.12 425,361 425,361 425,361 425,224 425,208.93 415.3,199.08 401.94,192.65"];
	tumor_bam -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 338.94 403.61 328.95 395.74 312.86 384.25 297 378 290.59 375.47 283.8 373.32 276.9 371.49 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 277.62 369.15 270.24 369.85 276.45 373.9 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 322.5 380.6 0 19 3 -bam ",
		label=bam,
		lp="322.5,382.5",
		pos="e,268.77,369.48 338.94,403.61 328.95,395.74 312.86,384.25 297,378 290.59,375.47 283.8,373.32 276.9,371.49"];
	tumor_bam -> docm_filter	[_draw_="c 7 -#000000 B 13 348.47 403.7 347.88 393.61 347 376.06 347 361 347 361 347 361 347 224 347 212.03 345.66 208.54 340 198 339.64 \
197.33 339.25 196.67 338.84 196.01 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 340.9 194.68 334.7 190.61 337.01 197.66 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 370 290.6 0 46 9 -tumor_bam ",
		label=tumor_bam,
		lp="370,292.5",
		pos="e,333.78,189.41 348.47,403.7 347.88,393.61 347,376.06 347,361 347,361 347,361 347,224 347,212.03 345.66,208.54 340,198 339.64,197.33 \
339.25,196.67 338.84,196.01"];
	bgzip	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 204.5 305.5 204.5 324.5 269.5 324.5 269.5 305.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 237 312.5 0 49 9 -bgzip VCF ",
		height=0.27778,
		label="bgzip VCF",
		pos="237,315",
		rects="204.5,305.5,269.5,324.5",
		width=0.90278];
	GATK_haplotype_caller -> bgzip	[_draw_="c 7 -#000000 B 4 206.33 350.71 211.37 345 218.21 337.26 224.15 330.54 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 225.89 332.27 228.69 325.4 222.22 329.02 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 227.5 335.6 0 13 4 -file ",
		label=file,
		lp="227.5,337.5",
		pos="e,229.7,324.27 206.33,350.71 211.37,345 218.21,337.26 224.15,330.54"];
	index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 210 260.5 210 279.5 272 279.5 272 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 241 267.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="241,270",
		rects="210,260.5,272,279.5",
		width=0.86111];
	bgzip -> index	[_draw_="c 7 -#000000 B 4 237.77 305.71 238.25 300.59 238.87 293.85 239.45 287.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 241.88 287.97 240.09 280.77 237 287.52 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 245.5 290.6 0 13 3 -vcf ",
		label=vcf,
		lp="245.5,292.5",
		pos="e,240.23,279.27 237.77,305.71 238.25,300.59 238.87,293.85 239.45,287.67"];
	decompose	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 206 215.5 206 234.5 310 234.5 310 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 258 222.5 0 88 16 -run vt decompose ",
		height=0.27778,
		label="run vt decompose",
		pos="258,225",
		rects="206,215.5,310,234.5",
		width=1.4444];
	decompose -> docm_filter	[_draw_="c 7 -#000000 B 7 257.82 215.71 258.14 210.02 259.52 202.69 264 198 265.46 196.47 267.05 195.07 268.74 193.8 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 269.74 196.06 274.38 190.27 267.15 191.91 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 303.5 200.6 0 79 17 -docm_raw_variants ",
		label=docm_raw_variants,
		lp="303.5,202.5",
		pos="e,275.66,189.47 257.82,215.71 258.14,210.02 259.52,202.69 264,198 265.46,196.47 267.05,195.07 268.74,193.8"];
	index -> decompose	[_draw_="c 7 -#000000 B 4 244.28 260.71 246.39 255.36 249.22 248.22 251.75 241.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 253.88 243.08 254.18 235.67 249.32 241.28 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 257.5 245.6 0 13 3 -vcf ",
		label=vcf,
		lp="257.5,247.5",
		pos="e,254.73,234.27 244.28,260.71 246.39,255.36 249.22,248.22 251.75,241.81"];
	bgzip2	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 292.5 125.5 292.5 144.5 357.5 144.5 357.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 325 132.5 0 49 9 -bgzip VCF ",
		height=0.27778,
		label="bgzip VCF",
		pos="325,135",
		rects="292.5,125.5,357.5,144.5",
		width=0.90278];
	index2	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 294 80.5 294 99.5 356 99.5 356 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 325 87.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="325,90",
		rects="294,80.5,356,99.5",
		width=0.86111];
	bgzip2 -> index2	[_draw_="c 7 -#000000 B 4 325 125.71 325 120.59 325 113.85 325 107.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 327.45 107.78 325 100.78 322.55 107.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 331.5 110.6 0 13 3 -vcf ",
		label=vcf,
		lp="331.5,112.5",
		pos="e,325,99.265 325,125.71 325,120.59 325,113.85 325,107.67"];
	index2 -> docm_variants_vcf	[_draw_="c 7 -#000000 B 4 325 80.71 325 75.59 325 68.85 325 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 327.45 62.78 325 55.78 322.55 62.78 ",
		pos="e,325,54.265 325,80.709 325,75.593 325,68.848 325,62.666"];
	docm_filter -> bgzip2	[_draw_="c 7 -#000000 B 4 325 170.71 325 165.59 325 158.85 325 152.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 327.45 152.78 325 145.78 322.55 152.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 331.5 155.6 0 13 4 -file ",
		label=file,
		lp="331.5,157.5",
		pos="e,325,144.27 325,170.71 325,165.59 325,158.85 325,152.67"];
}