digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 233 1259 233 1259 0 ",
		bb="0,0,1259,233",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
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		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
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	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 170 8 225 1251 225 1251 170 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 213 0 84 15 -Workflow Inputs ",
			bb="8,170,1251,225",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,215.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		downsample_strategy	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 554.5 178.5 554.5 197.5 679.5 197.5 679.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 617 185.5 0 109 19 -downsample_strategy ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=downsample_strategy,
			pos="617,188",
			rects="554.5,178.5,679.5,197.5",
			width=1.7361];
		max_alternate_alleles	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 794.5 178.5 794.5 197.5 919.5 197.5 919.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 857 185.5 0 109 21 -max_alternate_alleles ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=max_alternate_alleles,
			pos="857,188",
			rects="794.5,178.5,919.5,197.5",
			width=1.7361];
		intervals	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16.5 178.5 16.5 197.5 75.5 197.5 75.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 46 185.5 0 43 9 -intervals ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=intervals,
			pos="46,188",
			rects="16.5,178.5,75.5,197.5",
			width=0.81944];
		crams_to_downsample	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 354.5 178.5 354.5 197.5 483.5 197.5 483.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 419 185.5 0 113 19 -crams_to_downsample ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=crams_to_downsample,
			pos="419,188",
			rects="354.5,178.5,483.5,197.5",
			width=1.7917];
		emit_reference_confidence	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 79.5 178.5 79.5 197.5 228.5 197.5 228.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 154 185.5 0 133 25 -emit_reference_confidence ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=emit_reference_confidence,
			pos="154,188",
			rects="79.5,178.5,228.5,197.5",
			width=2.0694];
		read_filter	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 233 178.5 233 197.5 299 197.5 299 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 266 185.5 0 50 11 -read_filter ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=read_filter,
			pos="266,188",
			rects="233,178.5,299,197.5",
			width=0.91667];
		qc_minimum_base_quality	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1095 178.5 1095 197.5 1243 197.5 1243 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1169 185.5 0 132 23 -qc_minimum_base_quality ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=qc_minimum_base_quality,
			pos="1169,188",
			rects="1095,178.5,1243,197.5",
			width=2.0556];
		reference	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 487.5 178.5 487.5 197.5 550.5 197.5 550.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 519 185.5 0 47 9 -reference ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=reference,
			pos="519,188",
			rects="487.5,178.5,550.5,197.5",
			width=0.875];
		qc_minimum_mapping_quality	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 923.5 178.5 923.5 197.5 1090.5 197.5 1090.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1007 185.5 0 151 26 -qc_minimum_mapping_quality ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=qc_minimum_mapping_quality,
			pos="1007,188",
			rects="923.5,178.5,1090.5,197.5",
			width=2.3194];
		ploidy	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 303.5 178.5 303.5 197.5 350.5 197.5 350.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 327 185.5 0 31 6 -ploidy ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=ploidy,
			pos="327,188",
			rects="303.5,178.5,350.5,197.5",
			width=0.65278];
		downsample_seed	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 683.5 178.5 683.5 197.5 790.5 197.5 790.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 737 185.5 0 91 15 -downsample_seed ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=downsample_seed,
			pos="737,188",
			rects="683.5,178.5,790.5,197.5",
			width=1.4861];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 538 8 538 63 680 63 680 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 592 15 0 92 16 -Workflow Outputs ",
			bb="538,8,680,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="592,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		gvcfs	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 546.5 35.5 546.5 54.5 589.5 54.5 589.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 568 42.5 0 27 5 -gvcfs ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=gvcfs,
			pos="568,45",
			rects="546.5,35.5,589.5,54.5",
			width=0.59722];
		wgs_metrics	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 594 35.5 594 54.5 672 54.5 672 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 633 42.5 0 62 11 -wgs_metrics ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=wgs_metrics,
			pos="633,45",
			rects="594,35.5,672,54.5",
			width=1.0833];
	}
	downsample	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 542.5 125.5 542.5 144.5 697.5 144.5 697.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 620 132.5 0 139 24 -downsample unaligned BAM ",
		height=0.27778,
		label="downsample unaligned BAM",
		pos="620,135",
		rects="542.5,125.5,697.5,144.5",
		width=2.1528];
	downsample_strategy -> downsample	[_draw_="c 7 -#000000 B 4 617.5 178.58 617.91 171.52 618.52 161.24 619.03 152.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 621.46 152.91 619.42 145.78 616.57 152.62 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 635 155.6 0 34 8 -strategy ",
		label=strategy,
		lp="635,157.5",
		pos="e,619.51,144.26 617.5,178.58 617.91,171.52 618.52,161.24 619.03,152.55"];
	haplotype_caller	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 331 80.5 331 99.5 563 99.5 563 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 447 87.5 0 216 43 -scatter GATK HaplotypeCaller over intervals ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="scatter GATK HaplotypeCaller over intervals",
		pos="447,90",
		rects="331,80.5,563,99.5",
		width=3.2222];
	max_alternate_alleles -> haplotype_caller	[_draw_="c 7 -#000000 B 10 846.4 178.58 829.69 165.63 795.85 140.7 764 125 742.95 114.62 737.02 112.56 714 108 686.86 102.62 627.15 98.57 \
571.07 95.77 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 571.45 93.33 564.33 95.44 571.21 98.23 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 843 133.1 0 90 21 -max_alternate_alleles ",
		label=max_alternate_alleles,
		lp="843,135",
		pos="e,562.82,95.365 846.4,178.58 829.69,165.63 795.85,140.7 764,125 742.95,114.62 737.02,112.56 714,108 686.86,102.62 627.15,98.566 \
571.07,95.769"];
	intervals -> haplotype_caller	[_draw_="c 7 -#000000 B 10 53.86 178.87 67.1 165.63 95.25 139.45 124 125 150.3 111.79 158.96 112.76 188 108 231.56 100.85 279.72 96.69 322.56 \
94.27 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 322.69 96.71 329.55 93.89 322.43 91.82 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 142 133.1 0 36 9 -intervals ",
		label=intervals,
		lp="142,135",
		pos="e,331.06,93.806 53.858,178.87 67.102,165.63 95.25,139.45 124,125 150.3,111.79 158.96,112.76 188,108 231.56,100.85 279.72,96.688 \
322.56,94.267"];
	crams_to_downsample -> haplotype_caller	[_draw_="c 7 -#000000 B 7 412.04 178.64 402.75 166.41 388.52 143.12 398 125 402.68 116.06 410.9 109 419.28 103.68 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 420.46 105.83 425.29 100.21 418.01 101.59 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 445.5 133.1 0 95 22 -contamination_fraction ",
		label=contamination_fraction,
		lp="445.5,135",
		pos="e,426.61,99.456 412.04,178.64 402.75,166.41 388.52,143.12 398,125 402.68,116.06 410.9,109 419.28,103.68"];
	crams_to_downsample -> downsample	[_draw_="c 7 -#000000 B 7 447.47 178.55 472.11 171.35 508.77 160.95 541 153 550.47 150.66 560.62 148.34 570.39 146.2 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 570.68 148.64 577 144.77 569.64 143.86 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 550 155.6 0 18 3 -sam ",
		label=sam,
		lp="550,157.5",
		pos="e,578.48,144.45 447.47,178.55 472.11,171.35 508.77,160.95 541,153 550.47,150.66 560.62,148.34 570.39,146.2"];
	crams_to_downsample -> downsample	[_draw_="c 7 -#000000 B 7 426.65 178.66 434.62 170.58 447.89 158.74 462 153 491.51 141 503.05 147.51 535.47 145.23 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 535.43 147.69 542.18 144.63 534.99 142.81 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 484 155.6 0 44 11 -probability ",
		label=probability,
		lp="484,157.5",
		pos="e,543.69,144.49 426.65,178.66 434.62,170.58 447.89,158.74 462,153 491.51,141 503.05,147.51 535.47,145.23"];
	emit_reference_confidence -> haplotype_caller	[_draw_="c 7 -#000000 B 7 154.03 178.64 154.58 165.06 157.79 138.41 174 125 196.89 106.06 262.01 97.5 322.91 93.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 322.73 96.17 329.57 93.31 322.44 91.27 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 230 133.1 0 112 25 -emit_reference_confidence ",
		label=emit_reference_confidence,
		lp="230,135",
		pos="e,331.08,93.217 154.03,178.64 154.58,165.06 157.79,138.41 174,125 196.89,106.06 262.01,97.496 322.91,93.7"];
	read_filter -> haplotype_caller	[_draw_="c 7 -#000000 B 7 269.11 178.72 274.62 165.27 287.36 138.8 307 125 322.6 114.04 341.32 106.59 359.92 101.54 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 360.51 103.92 366.69 99.82 359.31 99.17 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 328 133.1 0 42 11 -read_filter ",
		label=read_filter,
		lp="328,135",
		pos="e,368.16,99.449 269.11,178.72 274.62,165.27 287.36,138.8 307,125 322.6,114.04 341.32,106.59 359.92,101.54"];
	collect_wgs_metrics	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 649.5 80.5 649.5 99.5 764.5 99.5 764.5 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 707 87.5 0 99 19 -collect WGS metrics ",
		height=0.27778,
		label="collect WGS metrics",
		pos="707,90",
		rects="649.5,80.5,764.5,99.5",
		width=1.5972];
	qc_minimum_base_quality -> collect_wgs_metrics	[_draw_="c 7 -#000000 B 7 1157.63 178.6 1138.16 164.73 1096.69 137.33 1057 125 1005.59 109.03 858.88 98.92 772.59 94.19 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 772.81 91.74 765.69 93.81 772.55 96.64 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1150 133.1 0 94 20 -minimum_base_quality ",
		label=minimum_base_quality,
		lp="1150,135",
		pos="e,764.18,93.73 1157.6,178.6 1138.2,164.73 1096.7,137.33 1057,125 1005.6,109.03 858.88,98.925 772.59,94.186"];
	reference -> collect_wgs_metrics	[_draw_="c 7 -#000000 B 10 533.58 178.52 539.94 175.25 547.63 171.85 555 170 572.27 165.67 702.73 174.9 715 162 728.83 147.46 721.98 122.94 \
715.07 106.86 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 717.38 106 712.2 100.69 712.93 108.07 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 743 133.1 0 40 9 -reference ",
		label=reference,
		lp="743,135",
		pos="e,711.56,99.319 533.58,178.52 539.94,175.25 547.63,171.85 555,170 572.27,165.67 702.73,174.9 715,162 728.83,147.46 721.98,122.94 \
715.07,106.86"];
	reference -> haplotype_caller	[_draw_="c 7 -#000000 B 7 515.35 178.65 508.39 162.79 493.58 129.52 490 125 483.76 117.12 475.34 109.95 467.61 104.25 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 469.16 102.34 462.03 100.32 466.34 106.35 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 520 133.1 0 40 9 -reference ",
		label=reference,
		lp="520,135",
		pos="e,460.79,99.448 515.35,178.65 508.39,162.79 493.58,129.52 490,125 483.76,117.12 475.34,109.95 467.61,104.25"];
	reference -> downsample	[_draw_="c 7 -#000000 B 7 532.04 178.57 543.59 171.3 561.05 160.77 577 153 580.87 151.11 585.01 149.27 589.13 147.54 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 589.99 149.83 595.55 144.93 588.15 145.29 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 597 155.6 0 40 9 -reference ",
		label=reference,
		lp="597,157.5",
		pos="e,596.95,144.36 532.04,178.57 543.59,171.3 561.05,160.77 577,153 580.87,151.11 585.01,149.27 589.13,147.54"];
	qc_minimum_mapping_quality -> collect_wgs_metrics	[_draw_="c 7 -#000000 B 7 996.43 178.52 979.06 165.02 942.89 138.78 908 125 864.67 107.88 812.76 99.38 772.54 95.16 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 772.86 92.73 765.65 94.47 772.37 97.6 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1001.5 133.1 0 109 23 -minimum_mapping_quality ",
		label=minimum_mapping_quality,
		lp="1001.5,135",
		pos="e,764.14,94.319 996.43,178.52 979.06,165.02 942.89,138.78 908,125 864.67,107.88 812.76,99.379 772.54,95.157"];
	ploidy -> haplotype_caller	[_draw_="c 7 -#000000 B 7 330.69 178.78 336.82 165.89 350.23 140.75 368 125 379.3 114.98 394.01 107.57 407.66 102.28 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 408.39 104.62 414.12 99.92 406.71 100.02 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 380.5 133.1 0 25 6 -ploidy ",
		label=ploidy,
		lp="380.5,135",
		pos="e,415.54,99.397 330.69,178.78 336.82,165.89 350.23,140.75 368,125 379.3,114.98 394.01,107.57 407.66,102.28"];
	downsample_seed -> downsample	[_draw_="c 7 -#000000 B 4 717.68 178.58 698.37 170.16 668.53 157.15 646.91 147.73 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 648.13 145.59 640.74 145.04 646.17 150.08 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 706 155.6 0 56 11 -random_seed ",
		label=random_seed,
		lp="706,157.5",
		pos="e,639.35,144.43 717.68,178.58 698.37,170.16 668.53,157.15 646.91,147.73"];
	collect_wgs_metrics -> wgs_metrics	[_draw_="c 7 -#000000 B 4 692.38 80.5 681.64 74.26 666.86 65.68 654.74 58.63 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 656.18 56.64 648.9 55.24 653.72 60.87 ",
		pos="e,647.59,54.478 692.38,80.505 681.64,74.262 666.86,65.676 654.74,58.631"];
	haplotype_caller -> gvcfs	[_draw_="c 7 -#000000 B 4 470.91 80.5 490.36 73.59 517.91 63.8 538.69 56.42 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 539.38 58.77 545.15 54.12 537.73 54.16 ",
		pos="e,546.58,53.613 470.91,80.505 490.36,73.59 517.91,63.802 538.69,56.415"];
	downsample -> collect_wgs_metrics	[_draw_="c 7 -#000000 B 7 621.14 125.54 622.36 119.78 624.87 112.42 630 108 633.66 104.85 637.77 102.25 642.13 100.1 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 642.81 102.48 648.3 97.49 640.9 97.97 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 659 110.6 0 58 11 -sample_name ",
		label=sample_name,
		lp="659,112.5",
		pos="e,649.69,96.901 621.14,125.54 622.36,119.78 624.87,112.42 630,108 633.66,104.85 637.77,102.25 642.13,100.1"];
	downsample -> collect_wgs_metrics	[_draw_="c 7 -#000000 B 7 666.57 125.58 673.03 123.35 679.37 120.54 685 117 689.49 114.17 693.53 110.14 696.89 106.08 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 698.71 107.74 700.95 100.67 694.79 104.8 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 703.5 110.6 0 19 3 -bam ",
		label=bam,
		lp="703.5,112.5",
		pos="e,701.86,99.459 666.57,125.58 673.03,123.35 679.37,120.54 685,117 689.49,114.17 693.53,110.14 696.89,106.08"];
	downsample -> haplotype_caller	[_draw_="c 7 -#000000 B 10 567.76 125.51 555 123.09 541.45 120.22 529 117 516.75 113.83 514.04 111.87 502 108 495.78 106 489.15 103.91 482.72 \
101.92 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 483.59 99.62 476.18 99.89 482.14 104.3 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 538.5 110.6 0 19 3 -bam ",
		label=bam,
		lp="538.5,112.5",
		pos="e,474.74,99.443 567.76,125.51 555,123.09 541.45,120.22 529,117 516.75,113.83 514.04,111.87 502,108 495.78,106 489.15,103.91 482.72,\
101.92"];
	downsample -> haplotype_caller	[_draw_="c 7 -#000000 B 10 593.18 125.55 585.06 122.91 576.14 119.92 568 117 557.67 113.29 555.57 110.95 545 108 535.58 105.37 525.53 103.07 \
515.59 101.08 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 516.11 98.69 508.77 99.78 515.19 103.5 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 595.5 110.6 0 55 13 -output_prefix ",
		label=output_prefix,
		lp="595.5,112.5",
		pos="e,507.29,99.491 593.18,125.55 585.06,122.91 576.14,119.92 568,117 557.67,113.29 555.57,110.95 545,108 535.58,105.37 525.53,103.07 \
515.59,101.08"];
}