digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 233 563 233 563 0 ",
		bb="0,0,563,233",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
	];
	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 170 8 225 555 225 555 170 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 213 0 84 15 -Workflow Inputs ",
			bb="8,170,555,225",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,215.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		bams	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16 178.5 16 197.5 60 197.5 60 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 38 185.5 0 28 4 -bams ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=bams,
			pos="38,188",
			rects="16,178.5,60,197.5",
			width=0.61111];
		mills	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 272.5 178.5 272.5 197.5 313.5 197.5 313.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 293 185.5 0 25 5 -mills ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=mills,
			pos="293,188",
			rects="272.5,178.5,313.5,197.5",
			width=0.56944];
		dbsnp_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 318 178.5 318 197.5 384 197.5 384 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 351 185.5 0 50 9 -dbsnp_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=dbsnp_vcf,
			pos="351,188",
			rects="318,178.5,384,197.5",
			width=0.91667];
		reference	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 205.5 178.5 205.5 197.5 268.5 197.5 268.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 237 185.5 0 47 9 -reference ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=reference,
			pos="237,188",
			rects="205.5,178.5,268.5,197.5",
			width=0.875];
		known_indels	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 388.5 178.5 388.5 197.5 471.5 197.5 471.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 430 185.5 0 67 12 -known_indels ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=known_indels,
			pos="430,188",
			rects="388.5,178.5,471.5,197.5",
			width=1.1528];
		downsample_probability	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 64.5 178.5 64.5 197.5 201.5 197.5 201.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 133 185.5 0 121 22 -downsample_probability ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=downsample_probability,
			pos="133,188",
			rects="64.5,178.5,201.5,197.5",
			width=1.9028];
		readgroups	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 475.5 178.5 475.5 197.5 546.5 197.5 546.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 511 185.5 0 55 10 -readgroups ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=readgroups,
			pos="511,188",
			rects="475.5,178.5,546.5,197.5",
			width=0.98611];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 175 8 175 63 393 63 393 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 229 15 0 92 16 -Workflow Outputs ",
			bb="175,8,393,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="229,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		mark_duplicates_metrics_file	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 183 35.5 183 54.5 343 54.5 343 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 263 42.5 0 144 28 -mark_duplicates_metrics_file ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=mark_duplicates_metrics_file,
			pos="263,45",
			rects="183,35.5,343,54.5",
			width=2.2222];
		bam	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 347 35.5 347 54.5 385 54.5 385 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 366 42.5 0 22 3 -bam ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=bam,
			pos="366,45",
			rects="347,35.5,385,54.5",
			width=0.52778];
	}
	downsample	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 72.5 125.5 72.5 144.5 227.5 144.5 227.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 150 132.5 0 139 24 -downsample unaligned BAM ",
		height=0.27778,
		label="downsample unaligned BAM",
		pos="150,135",
		rects="72.5,125.5,227.5,144.5",
		width=2.1528];
	bams -> downsample	[_draw_="c 7 -#000000 B 7 49.86 178.52 54.2 175.62 59.21 172.48 64 170 81.03 161.18 100.89 153.19 117.24 147.17 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 117.78 149.58 123.52 144.9 116.11 144.98 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 109.5 155.6 0 19 3 -bam ",
		label=bam,
		lp="109.5,157.5",
		pos="e,124.95,144.38 49.862,178.52 54.196,175.62 59.211,172.48 64,170 81.031,161.18 100.89,153.19 117.24,147.17"];
	align_workflow	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 225 80.5 225 99.5 403 99.5 403 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 314 87.5 0 162 29 -Unaligned BAM to BQSR and VCF ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="Unaligned BAM to BQSR and VCF",
		pos="314,90",
		rects="225,80.5,403,99.5",
		width=2.4722];
	mills -> align_workflow	[_draw_="c 7 -#000000 B 4 294.79 178.82 298.23 163.09 305.82 128.4 310.36 107.63 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 312.73 108.28 311.83 100.92 307.94 107.23 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 315.5 133.1 0 19 5 -mills ",
		label=mills,
		lp="315.5,135",
		pos="e,312.15,99.438 294.79,178.82 298.23,163.09 305.82,128.4 310.36,107.63"];
	dbsnp_vcf -> align_workflow	[_draw_="c 7 -#000000 B 4 347.85 178.82 341.76 163.02 328.29 128.09 320.3 107.36 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 322.6 106.5 317.8 100.85 318.03 108.26 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 355 133.1 0 42 9 -dbsnp_vcf ",
		label=dbsnp_vcf,
		lp="355,135",
		pos="e,317.25,99.438 347.85,178.82 341.76,163.02 328.29,128.09 320.3,107.36"];
	reference -> align_workflow	[_draw_="c 7 -#000000 B 7 238.53 178.53 241.19 165.74 247.71 141.27 261 125 268.15 116.25 278.16 109.02 287.57 103.51 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 288.64 105.72 293.59 100.2 286.27 101.43 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 281 133.1 0 40 9 -reference ",
		label=reference,
		lp="281,135",
		pos="e,294.91,99.469 238.53,178.53 241.19,165.74 247.71,141.27 261,125 268.15,116.25 278.16,109.02 287.57,103.51"];
	reference -> downsample	[_draw_="c 7 -#000000 B 7 224.79 178.51 210.44 168.53 188.48 153.27 188 153 184.95 151.28 181.7 149.61 178.43 148.02 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 179.61 145.86 172.23 145.13 177.54 150.31 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 220 155.6 0 40 9 -reference ",
		label=reference,
		lp="220,157.5",
		pos="e,170.85,144.49 224.79,178.51 210.44,168.53 188.48,153.27 188,153 184.95,151.28 181.7,149.61 178.43,148.02"];
	known_indels -> align_workflow	[_draw_="c 7 -#000000 B 7 424.3 178.51 415.38 165.7 397.05 141.19 377 125 366.21 116.29 352.86 108.71 341.23 102.94 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 342.62 100.89 335.25 100.06 340.5 105.3 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 425 133.1 0 56 12 -known_indels ",
		label=known_indels,
		lp="425,135",
		pos="e,333.88,99.409 424.3,178.51 415.38,165.7 397.05,141.19 377,125 366.21,116.29 352.86,108.71 341.23,102.94"];
	downsample_probability -> downsample	[_draw_="c 7 -#000000 B 4 135.81 178.58 138.18 171.45 141.66 161.02 144.58 152.27 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 146.88 153.12 146.77 145.7 142.23 151.57 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 166 155.6 0 44 11 -probability ",
		label=probability,
		lp="166,157.5",
		pos="e,147.25,144.26 135.81,178.58 138.18,171.45 141.66,161.02 144.58,152.27"];
	readgroups -> align_workflow	[_draw_="c 7 -#000000 B 7 505.8 178.73 496.9 165.28 477.43 138.81 454 125 435.09 113.85 412.68 106.34 391.41 101.3 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 392.16 98.96 384.79 99.82 391.09 103.74 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 502 133.1 0 48 10 -readgroups ",
		label=readgroups,
		lp="502,135",
		pos="e,383.32,99.486 505.8,178.73 496.9,165.28 477.43,138.81 454,125 435.09,113.85 412.68,106.34 391.41,101.3"];
	align_workflow -> mark_duplicates_metrics_file	[_draw_="c 7 -#000000 B 4 304.17 80.71 297.11 74.76 287.44 66.61 279.25 59.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 280.89 57.88 273.96 55.24 277.73 61.63 ",
		pos="e,272.8,54.265 304.17,80.709 297.11,74.76 287.44,66.609 279.25,59.701"];
	align_workflow -> bam	[_draw_="c 7 -#000000 B 4 324.27 80.5 331.4 74.62 341.04 66.64 349.26 59.84 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 350.75 61.79 354.58 55.44 347.63 58.02 ",
		pos="e,355.75,54.478 324.27,80.505 331.4,74.615 341.04,66.64 349.26,59.841"];
	downsample -> align_workflow	[_draw_="c 7 -#000000 B 7 169.02 125.61 182.48 119.95 201.07 112.69 218 108 227.43 105.39 237.5 103.09 247.43 101.09 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 247.84 103.51 254.24 99.78 246.91 98.7 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 229.5 110.6 0 23 4 -bams ",
		label=bams,
		lp="229.5,112.5",
		pos="e,255.73,99.49 169.02,125.61 182.48,119.95 201.07,112.69 218,108 227.43,105.39 237.5,103.09 247.43,101.09"];
}