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		lp="1534.5,315",
		pos="e,1506.3,279.44 1508.7,358.82 1508.3,343.17 1507.2,308.71 1506.5,287.91"];
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		label=StringTie,
		pos="1922,135",
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	sample_name -> stringtie	[_draw_="c 7 -#000000 B 10 1948 358.7 1948 348.6 1948 331.05 1948 316 1948 316 1948 316 1948 179 1948 168.58 1942.34 158.52 1936.3 150.76 ",
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		lp="1977,247.5",
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	star_genome_dir -> star_align_fusion	[_draw_="c 7 -#000000 B 13 570.66 358.5 579.94 355.35 590.86 352.04 601 350 640.8 341.97 651.82 347.81 692 342 729.7 336.55 739.13 334.56 \
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325 824.98,312.3 880.69,293.82 914.59,282.1"];
	bam_to_cram	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 250 72.5 250 91.5 390 91.5 390 72.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 320 79.5 0 124 22 -BAM to CRAM conversion ",
		height=0.27778,
		label="BAM to CRAM conversion",
		pos="320,82",
		rects="250,72.5,390,91.5",
		width=1.9444];
	reference -> bam_to_cram	[_draw_="c 7 -#000000 B 10 201.99 358.54 225.07 346.07 265 323.43 265 316 265 316 265 316 265 134 265 117.03 279.25 104.13 293.24 95.54 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 294.26 97.78 299.14 92.2 291.84 93.52 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 285 223.1 0 40 9 -reference ",
		label=reference,
		lp="285,225",
		pos="e,300.45,91.449 201.99,358.54 225.07,346.07 265,323.43 265,316 265,316 265,316 265,134 265,117.03 279.25,104.13 293.24,95.542"];
	cgpbigwig_bamcoverage	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 730 125.5 730 144.5 930 144.5 930 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 830 132.5 0 184 34 -cgpBigWig Converting BAM to BigWig ",
		height=0.27778,
		label="cgpBigWig Converting BAM to BigWig",
		pos="830,135",
		rects="730,125.5,930,144.5",
		width=2.7778];
	reference -> cgpbigwig_bamcoverage	[_draw_="c 7 -#000000 B 10 201.4 358.6 207.64 355.49 215.01 352.2 222 350 242.21 343.64 248.52 347.45 269 342 480.31 285.73 723.93 182.48 \
803.43 147.75 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 804.22 150.08 809.65 145.03 802.25 145.59 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 587 245.6 0 40 9 -reference ",
		label=reference,
		lp="587,247.5",
		pos="e,811.03,144.42 201.4,358.6 207.64,355.49 215.01,352.2 222,350 242.21,343.64 248.52,347.45 269,342 480.31,285.73 723.93,182.48 803.43,\
147.75"];
	generate_qc_metrics	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1661 125.5 1661 144.5 1795 144.5 1795 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1728 132.5 0 118 23 -Picard: RNA Seq Metrics ",
		height=0.27778,
		label="Picard: RNA Seq Metrics",
		pos="1728,135",
		rects="1661,125.5,1795,144.5",
		width=1.8611];
	ribosomal_intervals -> generate_qc_metrics	[_draw_="c 7 -#000000 B 10 1787.22 358.7 1778.75 340.37 1757.26 295.29 1735 260 1732.63 256.24 1730.42 256.21 1729 252 1717.6 218.3 1721.46 \
175.87 1724.94 152.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1727.35 153.25 1726.08 145.95 1722.52 152.45 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1769 245.6 0 80 19 -ribosomal_intervals ",
		label=ribosomal_intervals,
		lp="1769,247.5",
		pos="e,1726.3,144.45 1787.2,358.7 1778.8,340.37 1757.3,295.29 1735,260 1732.6,256.24 1730.4,256.21 1729,252 1717.6,218.3 1721.5,175.87 \
1724.9,152.81"];
	outsam_attrrg_line -> star_align_fusion	[_draw_="c 7 -#000000 B 13 300.09 358.56 310.66 355.24 323.31 351.81 335 350 368.83 344.77 610.35 352.28 643 342 671.45 333.04 671.08 315.52 \
699 305 745.24 287.58 799.35 278.93 845.12 274.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 845.3 277.15 852.06 274.09 844.87 272.26 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 737 313.1 0 76 18 -outsam_attrrg_line ",
		label=outsam_attrrg_line,
		lp="737,315",
		pos="e,853.56,273.96 300.09,358.56 310.66,355.24 323.31,351.81 335,350 368.83,344.77 610.35,352.28 643,342 671.45,333.04 671.08,315.52 \
699,305 745.24,287.58 799.35,278.93 845.12,274.7"];
	bam_to_trimmed_fastq	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 964.5 305.5 964.5 324.5 1093.5 324.5 1093.5 305.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1029 312.5 0 113 21 -bam to trimmed fastqs ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="bam to trimmed fastqs",
		pos="1029,315",
		rects="964.5,305.5,1093.5,324.5",
		width=1.7917];
	trimming_max_uncalled -> bam_to_trimmed_fastq	[_draw_="c 7 -#000000 B 7 1056.17 358.57 1047.4 354.85 1038.84 349.55 1033 342 1030.86 339.23 1029.64 335.8 1028.99 332.34 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1031.45 332.35 1028.43 325.57 1026.56 332.75 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1061.5 335.6 0 57 12 -max_uncalled ",
		label=max_uncalled,
		lp="1061.5,337.5",
		pos="e,1028.3,324.06 1056.2,358.57 1047.4,354.85 1038.8,349.55 1033,342 1030.9,339.23 1029.6,335.8 1029,332.34"];
	trimming_adapter_trim_end -> bam_to_trimmed_fastq	[_draw_="c 7 -#000000 B 13 1202.07 358.53 1188.57 355.6 1173.13 352.44 1159 350 1132.49 345.42 1123.9 352.18 1099 342 1092.83 339.48 1092.96 \
335.99 1087 333 1082.67 330.83 1078.02 328.89 1073.3 327.17 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1074.2 324.89 1066.78 324.96 1072.63 329.53 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1135 335.6 0 72 16 -adapter_trim_end ",
		label=adapter_trim_end,
		lp="1135,337.5",
		pos="e,1065.3,324.48 1202.1,358.53 1188.6,355.6 1173.1,352.44 1159,350 1132.5,345.42 1123.9,352.18 1099,342 1092.8,339.48 1093,335.99 \
1087,333 1082.7,330.83 1078,328.89 1073.3,327.17"];
	instrument_data_bams -> bam_to_trimmed_fastq	[_draw_="c 7 -#000000 B 13 697.46 358.58 709.19 355.62 722.65 352.43 735 350 758.81 345.31 765.03 345.74 789 342 813.47 338.18 819.43 336.14 \
844 333 881.02 328.28 922.38 324.35 956.58 321.46 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 956.38 323.94 963.16 320.92 955.98 319.06 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 853.5 335.6 0 19 3 -bam ",
		label=bam,
		lp="853.5,337.5",
		pos="e,964.67,320.79 697.46,358.58 709.19,355.62 722.65,352.43 735,350 758.81,345.31 765.03,345.74 789,342 813.47,338.18 819.43,336.14 \
844,333 881.02,328.28 922.38,324.35 956.58,321.46"];
	trimming_adapter_min_overlap -> bam_to_trimmed_fastq	[_draw_="c 7 -#000000 B 7 933.58 358.79 933.67 351.04 935.1 339.64 942 333 944.83 330.28 949.99 327.96 956.43 326.01 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 956.93 328.41 963.07 324.25 955.67 323.67 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 985 335.6 0 86 19 -adapter_min_overlap ",
		label=adapter_min_overlap,
		lp="985,337.5",
		pos="e,964.53,323.87 933.58,358.79 933.67,351.04 935.1,339.64 942,333 944.83,330.28 949.99,327.96 956.43,326.01"];
	star_fusion_detect	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 384 125.5 384 144.5 634 144.5 634 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 509 132.5 0 234 48 -STAR-Fusion identify candidate fusion transcript ",
		height=0.27778,
		label="STAR-Fusion identify candidate fusion transcript",
		pos="509,135",
		rects="384,125.5,634,144.5",
		width=3.4722];
	star_fusion_genome_dir -> star_fusion_detect	[_draw_="c 7 -#000000 B 7 90.24 358.78 112.83 333.61 184.99 256.8 260 215 323.18 179.8 404.27 157.8 456.44 146.21 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 456.76 148.65 463.07 144.76 455.71 143.86 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 263.5 245.6 0 97 22 -star_fusion_genome_dir ",
		label=star_fusion_genome_dir,
		lp="263.5,247.5",
		pos="e,464.55,144.44 90.241,358.78 112.83,333.61 184.99,256.8 260,215 323.18,179.8 404.27,157.8 456.44,146.21"];
	strand -> kallisto	[_draw_="c 7 -#000000 B 7 1707.28 358.64 1707.84 336.02 1708.11 274.36 1695 260 1672.65 235.53 1462.47 202.7 1362.44 188.29 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1363.04 185.9 1355.77 187.34 1362.35 190.75 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1715.5 268.1 0 27 6 -strand ",
		label=strand,
		lp="1715.5,270",
		pos="e,1354.3,187.12 1707.3,358.64 1707.8,336.02 1708.1,274.36 1695,260 1672.7,235.53 1462.5,202.7 1362.4,188.29"];
	strand -> stringtie	[_draw_="c 7 -#000000 B 10 1719.52 358.66 1724.26 355.71 1729.77 352.5 1735 350 1850.94 294.6 1933.13 357.14 2007 252 2033.69 214.02 1976.77 \
170.01 1943.61 148.77 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1945.06 146.79 1937.83 145.16 1942.47 150.95 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2024.5 245.6 0 27 6 -strand ",
		label=strand,
		lp="2024.5,247.5",
		pos="e,1936.5,144.36 1719.5,358.66 1724.3,355.71 1729.8,352.5 1735,350 1850.9,294.6 1933.1,357.14 2007,252 2033.7,214.02 1976.8,170.01 \
1943.6,148.77"];
	strand -> generate_qc_metrics	[_draw_="c 7 -#000000 B 16 1710.04 358.5 1715.36 343.1 1726.17 309.44 1730 280 1731.15 271.19 1735.58 266.92 1730 260 1719.43 246.91 1703.57 \
265.09 1693 252 1689.46 247.61 1661.57 208.18 1696 153 1696.76 151.79 1697.63 150.66 1698.59 149.61 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1699.92 151.69 1703.75 145.34 1696.8 147.91 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1706.5 245.6 0 27 6 -strand ",
		label=strand,
		lp="1706.5,247.5",
		pos="e,1704.9,144.37 1710,358.5 1715.4,343.1 1726.2,309.44 1730,280 1731.1,271.19 1735.6,266.92 1730,260 1719.4,246.91 1703.6,265.09 \
1693,252 1689.5,247.61 1661.6,208.18 1696,153 1696.8,151.79 1697.6,150.66 1698.6,149.61"];
	transcript_to_gene	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1082.5 125.5 1082.5 144.5 1225.5 144.5 1225.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1154 132.5 0 127 26 -Kallisto: TranscriptToGene ",
		height=0.27778,
		label="Kallisto: TranscriptToGene",
		pos="1154,135",
		rects="1082.5,125.5,1225.5,144.5",
		width=1.9861];
	gene_transcript_lookup_table -> transcript_to_gene	[_draw_="c 7 -#000000 B 7 439.03 358.54 520.2 330.09 791.86 236.01 1020 170 1049.75 161.39 1083.55 152.82 1109.77 146.44 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1110.3 148.83 1116.52 144.81 1109.14 144.07 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 841.5 245.6 0 121 28 -gene_transcript_lookup_table ",
		label=gene_transcript_lookup_table,
		lp="841.5,247.5",
		pos="e,1118,144.45 439.03,358.54 520.2,330.09 791.86,236.01 1020,170 1049.7,161.39 1083.6,152.82 1109.8,146.44"];
	gtf_file -> stringtie	[_draw_="c 7 -#000000 B 10 1593.37 358.67 1598.21 355.78 1603.78 352.61 1609 350 1709.46 299.71 1754.83 322.87 1842 252 1876.81 223.7 1902.8 \
176.42 1914.74 151.88 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1916.94 152.95 1917.73 145.58 1912.52 150.86 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1896.5 245.6 0 89 20 -reference_annotation ",
		label=reference_annotation,
		lp="1896.5,247.5",
		pos="e,1918.4,144.21 1593.4,358.67 1598.2,355.78 1603.8,352.61 1609,350 1709.5,299.71 1754.8,322.87 1842,252 1876.8,223.7 1902.8,176.42 \
1914.7,151.88"];
	gtf_file -> strandedness_check	[_draw_="c 7 -#000000 B 7 1579.64 358.51 1578.7 345.68 1575.3 321.17 1563 305 1556 295.79 1545.72 288.58 1535.81 283.21 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1537.07 281.1 1529.72 280.14 1534.87 285.48 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1587 313.1 0 28 8 -gtf_file ",
		label=gtf_file,
		lp="1587,315",
		pos="e,1528.4,279.46 1579.6,358.51 1578.7,345.68 1575.3,321.17 1563,305 1556,295.79 1545.7,288.58 1535.8,283.21"];
	gtf_file -> star_align_fusion	[_draw_="c 7 -#000000 B 7 1568.11 358.57 1563.06 355.39 1556.96 352.04 1551 350 1380.31 291.53 1168.92 275.89 1046.55 271.98 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1046.85 269.53 1039.78 271.77 1046.7 274.43 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1476 313.1 0 28 8 -gtf_file ",
		label=gtf_file,
		lp="1476,315",
		pos="e,1038.3,271.72 1568.1,358.57 1563.1,355.39 1557,352.04 1551,350 1380.3,291.53 1168.9,275.89 1046.6,271.98"];
	refFlat -> generate_qc_metrics	[_draw_="c 7 -#000000 B 10 1864.05 358.69 1846.03 345.95 1814 322.41 1814 316 1814 316 1814 316 1814 179 1814 163.65 1802.9 153.78 1788.68 \
147.43 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1789.82 145.24 1782.41 144.97 1788.03 149.81 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1827.5 245.6 0 27 7 -refFlat ",
		label=refFlat,
		lp="1827.5,247.5",
		pos="e,1781,144.42 1864,358.69 1846,345.95 1814,322.41 1814,316 1814,316 1814,316 1814,179 1814,163.65 1802.9,153.78 1788.7,147.43"];
	trimming_min_readlength -> bam_to_trimmed_fastq	[_draw_="c 7 -#000000 B 13 1359.1 358.55 1345.86 355.37 1330.28 352.02 1316 350 1286.03 345.75 1208.43 352.41 1180 342 1173.74 339.71 1174.18 \
335.49 1168 333 1147.3 324.67 1123.58 320.13 1101.66 317.73 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1102.07 315.31 1094.87 317.06 1101.59 320.18 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1212 335.6 0 64 14 -min_readlength ",
		label=min_readlength,
		lp="1212,337.5",
		pos="e,1093.4,316.91 1359.1,358.55 1345.9,355.37 1330.3,352.02 1316,350 1286,345.75 1208.4,352.41 1180,342 1173.7,339.71 1174.2,335.49 \
1168,333 1147.3,324.67 1123.6,320.13 1101.7,317.73"];
	trimming_adapters -> bam_to_trimmed_fastq	[_draw_="c 7 -#000000 B 7 812.86 358.51 834.5 350.78 868.05 339.6 898 333 916.73 328.87 937.2 325.62 956.28 323.13 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 956.51 325.57 963.14 322.26 955.89 320.71 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 916.5 335.6 0 37 8 -adapters ",
		label=adapters,
		lp="916.5,337.5",
		pos="e,964.64,322.07 812.86,358.51 834.5,350.78 868.05,339.6 898,333 916.73,328.87 937.2,325.62 956.28,323.13"];
	cdna_fasta -> strandedness_check	[_draw_="c 7 -#000000 B 7 1640.39 358.52 1634.34 345.26 1620.93 319.63 1602 305 1588.29 294.41 1571.02 286.94 1554.91 281.76 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1555.98 279.53 1548.57 279.84 1554.56 284.22 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1643 313.1 0 46 10 -cdna_fasta ",
		label=cdna_fasta,
		lp="1643,315",
		pos="e,1547.1,279.4 1640.4,358.52 1634.3,345.26 1620.9,319.63 1602,305 1588.3,294.41 1571,286.94 1554.9,281.76"];
	kallisto -> transcript_abundance_tsv	[_draw_="c 7 -#000000 B 4 1319.55 170.82 1338.71 154.39 1382.04 117.25 1405.75 96.93 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1407.29 98.84 1411.01 92.42 1404.1 95.12 ",
		pos="e,1412.2,91.438 1319.5,170.82 1338.7,154.39 1382,117.25 1405.8,96.928"];
	kallisto -> fusion_evidence	[_draw_="c 7 -#000000 B 4 1330.44 170.65 1372.46 153.49 1468.58 114.22 1516.6 94.6 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1517.48 96.89 1523.04 91.97 1515.63 92.35 ",
		pos="e,1524.4,91.4 1330.4,170.65 1372.5,153.49 1468.6,114.22 1516.6,94.6"];
	kallisto -> transcript_abundance_h5	[_draw_="c 7 -#000000 B 4 1307.19 170.82 1301.76 155.02 1289.75 120.09 1282.62 99.36 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1284.99 98.69 1280.39 92.87 1280.35 100.29 ",
		pos="e,1279.9,91.438 1307.2,170.82 1301.8,155.02 1289.7,120.09 1282.6,99.356"];
	kallisto -> transcript_to_gene	[_draw_="c 7 -#000000 B 7 1265.57 173.86 1248.3 171.22 1228.5 167.39 1211 162 1199.4 158.43 1187.09 153.03 1176.89 148.08 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1178.25 146.02 1170.9 145.09 1176.07 150.41 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1250.5 155.6 0 79 19 -transcript_table_h5 ",
		label=transcript_table_h5,
		lp="1250.5,157.5",
		pos="e,1169.5,144.41 1265.6,173.86 1248.3,171.22 1228.5,167.39 1211,162 1199.4,158.43 1187.1,153.03 1176.9,148.08"];
	stringtie -> stringtie_transcript_gtf	[_draw_="c 7 -#000000 B 4 1936.2 125.58 1949.89 117.46 1970.8 105.06 1986.53 95.73 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1987.7 97.88 1992.48 92.21 1985.21 93.67 ",
		pos="e,1993.8,91.434 1936.2,125.58 1949.9,117.46 1970.8,105.06 1986.5,95.734"];
	stringtie -> stringtie_gene_expression_tsv	[_draw_="c 7 -#000000 B 4 1911.27 125.58 1901.14 117.63 1885.79 105.59 1874 96.34 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1875.74 94.59 1868.72 92.2 1872.72 98.45 ",
		pos="e,1867.5,91.265 1911.3,125.58 1901.1,117.63 1885.8,105.59 1874,96.338"];
	strandedness_check -> strand_info	[_draw_="c 7 -#000000 B 10 1578.7 260.57 1616.13 254.13 1654 243.33 1654 226 1654 226 1654 226 1654 134 1654 121.31 1648.37 108.08 1642.94 \
98.28 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1645.2 97.29 1639.51 92.53 1640.99 99.8 ",
		pos="e,1638.7,91.233 1578.7,260.57 1616.1,254.13 1654,243.33 1654,226 1654,226 1654,226 1654,134 1654,121.31 1648.4,108.08 1642.9,98.284"];
	mark_dup	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1022 170.5 1022 189.5 1160 189.5 1160 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1091 177.5 0 122 24 -Mark duplicates and Sort ",
		height=0.27778,
		label="Mark duplicates and Sort",
		pos="1091,180",
		rects="1022,170.5,1160,189.5",
		width=1.9167];
	mark_dup -> stringtie	[_draw_="c 7 -#000000 B 13 1159.6 175.18 1191.36 173.47 1229.6 171.51 1264 170 1362.64 165.66 1387.37 166.47 1486 162 1624.29 155.73 1658.85 \
153.75 1797 145 1826.14 143.15 1859.07 140.77 1883.82 138.92 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1883.9 141.37 1890.7 138.4 1883.53 136.49 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1671.5 155.6 0 19 3 -bam ",
		label=bam,
		lp="1671.5,157.5",
		pos="e,1892.2,138.29 1159.6,175.18 1191.4,173.47 1229.6,171.51 1264,170 1362.6,165.66 1387.4,166.47 1486,162 1624.3,155.73 1658.8,153.75 \
1797,145 1826.1,143.15 1859.1,140.77 1883.8,138.92"];
	mark_dup -> cgpbigwig_bamcoverage	[_draw_="c 7 -#000000 B 4 1039.43 170.5 996.36 163.41 934.9 153.28 889.7 145.84 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 890.26 143.44 882.95 144.72 889.46 148.28 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 992.5 155.6 0 19 3 -bam ",
		label=bam,
		lp="992.5,157.5",
		pos="e,881.46,144.48 1039.4,170.5 996.36,163.41 934.9,153.28 889.7,145.84"];
	mark_dup -> generate_qc_metrics	[_draw_="c 7 -#000000 B 4 1159.78 174.36 1280.22 166.23 1528.36 149.48 1653.03 141.06 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1653.1 143.51 1659.92 140.6 1652.77 138.62 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1475.5 155.6 0 19 3 -bam ",
		label=bam,
		lp="1475.5,157.5",
		pos="e,1661.4,140.49 1159.8,174.36 1280.2,166.23 1528.4,149.48 1653,141.06"];
	index_bam	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 944 125.5 944 144.5 1036 144.5 1036 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 990 132.5 0 76 14 -samtools index ",
		height=0.27778,
		label="samtools index",
		pos="990,135",
		rects="944,125.5,1036,144.5",
		width=1.2778];
	mark_dup -> index_bam	[_draw_="c 7 -#000000 B 4 1071.05 170.5 1055.69 163.97 1034.3 154.86 1017.35 147.64 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1018.71 145.56 1011.31 145.07 1016.79 150.07 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1058.5 155.6 0 19 3 -bam ",
		label=bam,
		lp="1058.5,157.5",
		pos="e,1009.9,144.48 1071,170.5 1055.7,163.97 1034.3,154.86 1017.4,147.64"];
	index_cram	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 539.5 0.5 539.5 19.5 658.5 19.5 658.5 0.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 599 7.5 0 103 19 -samtools index cram ",
		height=0.27778,
		label="samtools index cram",
		pos="599,10",
		rects="539.5,0.5,658.5,19.5",
		width=1.6528];
	bam_to_cram -> index_cram	[_draw_="c 7 -#000000 B 7 334.85 72.57 350.02 64.33 374.46 52.02 397 45 440.74 31.37 491.62 22.85 531.37 17.74 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 531.53 20.19 538.17 16.89 530.93 15.33 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 472.5 30.6 0 21 4 -cram ",
		label=cram,
		lp="472.5,32.5",
		pos="e,539.68,16.707 334.85,72.572 350.02,64.33 374.46,52.024 397,45 440.74,31.37 491.62,22.848 531.37,17.744"];
	index_cram -> cram	[_draw_="c 7 -#000000 B 7 658.44 13.23 723.86 16.66 824.01 25.07 856 45 863.58 49.73 869.3 57.83 873.25 65.16 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 870.94 66 876.19 71.24 875.35 63.87 ",
		pos="e,876.85,72.606 658.44,13.235 723.86,16.664 824.01,25.069 856,45 863.58,49.725 869.3,57.834 873.25,65.16"];
	transcript_to_gene -> gene_abundance	[_draw_="c 7 -#000000 B 4 1154 125.58 1154 118.52 1154 108.24 1154 99.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1156.45 99.78 1154 92.78 1151.55 99.78 ",
		pos="e,1154,91.265 1154,125.58 1154,118.52 1154,108.24 1154,99.547"];
	cgpbigwig_bamcoverage -> bamcoverage_bigwig	[_draw_="c 7 -#000000 B 4 824.22 125.58 819.12 118.15 811.57 107.15 805.42 98.19 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 807.51 96.9 801.53 92.51 803.47 99.67 ",
		pos="e,800.67,91.265 824.22,125.58 819.12,118.15 811.57,107.15 805.42,98.188"];
	generate_qc_metrics -> metrics	[_draw_="c 7 -#000000 B 4 1723.21 125.58 1719.03 118.23 1712.86 107.37 1707.79 98.46 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1710.04 97.45 1704.45 92.58 1705.78 99.88 ",
		pos="e,1703.7,91.265 1723.2,125.58 1719,118.23 1712.9,107.37 1707.8,98.457"];
	generate_qc_metrics -> chart	[_draw_="c 7 -#000000 B 4 1731.63 125.58 1734.74 118.37 1739.3 107.81 1743.1 99 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1745.31 100.05 1745.84 92.65 1740.81 98.11 ",
		pos="e,1746.4,91.265 1731.6,125.58 1734.7,118.37 1739.3,107.81 1743.1,99"];
	sort_bam	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1066.5 215.5 1066.5 234.5 1149.5 234.5 1149.5 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1108 222.5 0 67 13 -samtools sort ",
		height=0.27778,
		label="samtools sort",
		pos="1108,225",
		rects="1066.5,215.5,1149.5,234.5",
		width=1.1528];
	sort_bam -> mark_dup	[_draw_="c 7 -#000000 B 4 1104.72 215.71 1102.61 210.36 1099.78 203.22 1097.25 196.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1099.68 196.28 1094.82 190.67 1095.12 198.08 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1110.5 200.6 0 19 3 -bam ",
		label=bam,
		lp="1110.5,202.5",
		pos="e,1094.3,189.27 1104.7,215.71 1102.6,210.36 1099.8,203.22 1097.2,196.81"];
	star_align_fusion -> star_fusion_log	[_draw_="c 7 -#000000 B 13 952.07 260.58 959.74 249.95 973.34 231.11 985 215 1004.97 187.42 1009.78 180.4 1030 153 1032.64 149.42 1033.99 \
148.96 1036 145 1043.46 130.32 1048.6 112.18 1051.63 99.32 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1053.94 100.21 1053.07 92.85 1049.16 99.15 ",
		pos="e,1053.4,91.373 952.07,260.58 959.74,249.95 973.34,231.11 985,215 1005,187.42 1009.8,180.4 1030,153 1032.6,149.42 1034,148.96 1036,\
145 1043.5,130.32 1048.6,112.18 1051.6,99.323"];
	star_align_fusion -> star_fusion_out	[_draw_="c 7 -#000000 B 7 925.16 260.51 884.41 243.21 792.69 200.74 730 145 714.76 131.45 701.39 112.11 693.05 98.64 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 695.23 97.52 689.52 92.78 691.03 100.04 ",
		pos="e,688.74,91.483 925.16,260.51 884.41,243.21 792.69,200.74 730,145 714.76,131.45 701.39,112.11 693.05,98.644"];
	star_align_fusion -> star_junction_out	[_draw_="c 7 -#000000 B 10 943.15 260.54 940.52 251.95 937 238.2 937 226 937 226 937 226 937 134 937 121.68 941.73 108.58 946.34 98.75 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 948.43 100.05 949.4 92.7 944.06 97.84 ",
		pos="e,950.08,91.344 943.15,260.54 940.52,251.95 937,238.2 937,226 937,226 937,226 937,134 937,121.68 941.73,108.58 946.34,98.75"];
	star_align_fusion -> sort_bam	[_draw_="c 7 -#000000 B 4 978.01 260.5 1003.86 253.64 1040.37 243.95 1068.12 236.59 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1068.46 239.03 1074.6 234.87 1067.2 234.29 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1062.5 245.6 0 43 9 -input_bam ",
		label=input_bam,
		lp="1062.5,247.5",
		pos="e,1076.1,234.48 978.01,260.5 1003.9,253.64 1040.4,243.95 1068.1,236.59"];
	star_align_fusion -> star_fusion_detect	[_draw_="c 7 -#000000 B 10 854 260.56 843.72 258.34 833.52 255.53 824 252 817.06 249.43 816.64 246.26 810 243 719.66 198.64 606.15 163.41 \
547.72 146.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 548.7 144.38 541.3 144.82 547.36 149.1 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 751 200.6 0 50 13 -junction_file ",
		label=junction_file,
		lp="751,202.5",
		pos="e,539.84,144.41 854,260.56 843.72,258.34 833.52,255.53 824,252 817.06,249.43 816.64,246.26 810,243 719.66,198.64 606.15,163.41 547.72,\
146.65"];
	bam_to_trimmed_fastq -> kallisto	[_draw_="c 7 -#000000 B 7 1093.23 310.27 1169.66 305.19 1288.79 294.98 1303 280 1323.95 257.91 1319.32 219.17 1314.44 197.27 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1316.88 196.95 1312.83 190.74 1312.12 198.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1331 245.6 0 26 6 -fastqs ",
		label=fastqs,
		lp="1331,247.5",
		pos="e,1312.5,189.27 1093.2,310.27 1169.7,305.19 1288.8,294.98 1303,280 1323.9,257.91 1319.3,219.17 1314.4,197.27"];
	bam_to_trimmed_fastq -> strandedness_check	[_draw_="c 7 -#000000 B 7 1093.34 311.54 1151.18 309 1238.4 304.36 1314 297 1357.26 292.79 1405.77 286.2 1443.21 280.71 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1443.44 283.16 1450.01 279.71 1442.73 278.31 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1402.5 290.6 0 29 6 -reads2 ",
		label=reads2,
		lp="1402.5,292.5",
		pos="e,1451.5,279.49 1093.3,311.54 1151.2,309 1238.4,304.36 1314,297 1357.3,292.79 1405.8,286.2 1443.2,280.71"];
	bam_to_trimmed_fastq -> strandedness_check	[_draw_="c 7 -#000000 B 7 1093.29 313.09 1187.25 311.43 1357.49 307.11 1418 297 1437.44 293.75 1458.65 287.57 1475.38 282.05 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1475.92 284.45 1481.77 279.89 1474.35 279.81 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1468.5 290.6 0 29 6 -reads1 ",
		label=reads1,
		lp="1468.5,292.5",
		pos="e,1483.2,279.41 1093.3,313.09 1187.2,311.43 1357.5,307.11 1418,297 1437.4,293.75 1458.7,287.57 1475.4,282.05"];
	bam_to_trimmed_fastq -> star_align_fusion	[_draw_="c 7 -#000000 B 4 1012.6 305.5 1000.32 299.14 983.35 290.35 969.61 283.23 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 971.05 281.22 963.71 280.17 968.8 285.57 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1007.5 290.6 0 27 6 -fastq2 ",
		label=fastq2,
		lp="1007.5,292.5",
		pos="e,962.36,279.48 1012.6,305.5 1000.3,299.14 983.35,290.35 969.61,283.23"];
	bam_to_trimmed_fastq -> star_align_fusion	[_draw_="c 7 -#000000 B 7 970.82 305.52 965.83 303.28 961.12 300.48 957 297 953.97 294.44 951.76 290.9 950.14 287.26 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 952.55 286.73 947.99 280.88 947.91 288.3 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 968 290.6 0 22 5 -fastq ",
		label=fastq,
		lp="968,292.5",
		pos="e,947.5,279.45 970.82,305.52 965.83,303.28 961.12,300.48 957,297 953.97,294.44 951.76,290.9 950.14,287.26"];
	index_bam -> bam_to_cram	[_draw_="c 7 -#000000 B 10 944.15 126.42 940.05 125.88 935.95 125.4 932 125 695.16 101.16 632.97 131.33 397 100 385.1 98.42 372.31 95.93 \
360.65 93.33 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 361.22 90.95 353.85 91.77 360.13 95.73 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 828.5 110.6 0 19 3 -bam ",
		label=bam,
		lp="828.5,112.5",
		pos="e,352.38,91.436 944.15,126.42 940.05,125.88 935.95,125.4 932,125 695.16,101.16 632.97,131.33 397,100 385.1,98.42 372.31,95.927 360.65,\
93.332"];
	star_fusion_detect -> star_fusion_predict	[_draw_="c 7 -#000000 B 4 501.07 125.58 493.87 117.93 483.1 106.48 474.54 97.39 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 476.4 95.79 469.82 92.37 472.83 99.14 ",
		pos="e,468.78,91.265 501.07,125.58 493.87,117.93 483.1,106.48 474.54,97.387"];
	star_fusion_detect -> star_fusion_abridge	[_draw_="c 7 -#000000 B 4 520.23 125.58 530.82 117.63 546.88 105.59 559.22 96.34 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 560.64 98.33 564.77 92.17 557.7 94.41 ",
		pos="e,565.98,91.265 520.23,125.58 530.82,117.63 546.88,105.59 559.22,96.338"];
	default1	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 985.5 215.5 985.5 234.5 1062.5 234.5 1062.5 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1024 222.5 0 61 12 -\"coordinate\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"coordinate\"",
		pos="1024,225",
		rects="985.5,215.5,1062.5,234.5",
		width=1.0694];
	default1 -> mark_dup	[_draw_="c 7 -#000000 B 7 1023.46 215.73 1023.54 210.06 1024.63 202.72 1029 198 1030.43 196.46 1031.98 195.05 1033.63 193.77 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1034.59 196.06 1039.16 190.22 1031.94 191.94 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1062.5 200.6 0 67 16 -input_sort_order ",
		label=input_sort_order,
		lp="1062.5,202.5",
		pos="e,1040.4,189.41 1023.5,215.73 1023.5,210.06 1024.6,202.72 1029,198 1030.4,196.46 1032,195.05 1033.6,193.77"];
}