digraph workflow {
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	edge [arrowsize=0.7,
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		fontcolor=black,
		fontname=Helvetica,
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	subgraph cluster_inputs {
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			lp="58,260.5",
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		intervals	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16.5 223.5 16.5 242.5 75.5 242.5 75.5 223.5 ",
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			width=2.3194];
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			pos="571,233",
			rects="517.5,223.5,624.5,242.5",
			width=1.4861];
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			fillcolor="#94DDF4",
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			width=0.875];
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			width=1.7361];
		read_filter	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 825 223.5 825 242.5 891 242.5 891 223.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 858 230.5 0 50 11 -read_filter ",
			fillcolor="#94DDF4",
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			label=read_filter,
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			rects="825,223.5,891,242.5",
			width=0.91667];
		emit_reference_confidence	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 895.5 223.5 895.5 242.5 1044.5 242.5 1044.5 223.5 ",
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			fillcolor="#94DDF4",
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			rects="895.5,223.5,1044.5,242.5",
			width=2.0694];
		downsample_strategy	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1048.5 223.5 1048.5 242.5 1173.5 242.5 1173.5 223.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1111 230.5 0 109 19 -downsample_strategy ",
			fillcolor="#94DDF4",
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			pos="1111,233",
			rects="1048.5,223.5,1173.5,242.5",
			width=1.7361];
		crams_to_downsample	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1322.5 223.5 1322.5 242.5 1451.5 242.5 1451.5 223.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1387 230.5 0 113 19 -crams_to_downsample ",
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			rects="1322.5,223.5,1451.5,242.5",
			width=1.7917];
		variant_index_parameter	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1178 223.5 1178 242.5 1318 242.5 1318 223.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1248 230.5 0 124 23 -variant_index_parameter ",
			fillcolor="#94DDF4",
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			label=variant_index_parameter,
			pos="1248,233",
			rects="1178,223.5,1318,242.5",
			width=1.9444];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 1043 8 1043 63 1161 63 1161 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 1097 15 0 92 16 -Workflow Outputs ",
			bb="1043,8,1161,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="1097,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		result_directories	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1051.5 35.5 1051.5 54.5 1152.5 54.5 1152.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1102 42.5 0 85 18 -result_directories ",
			fillcolor="#94DDF4",
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			label=result_directories,
			pos="1102,45",
			rects="1051.5,35.5,1152.5,54.5",
			width=1.4028];
	}
	downsample_and_recall	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 666.5 170.5 666.5 189.5 849.5 189.5 849.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 758 177.5 0 167 30 -Downsample and HaplotypeCaller ",
		fillcolor="#F3CEA1",
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		label="Downsample and HaplotypeCaller",
		pos="758,180",
		rects="666.5,170.5,849.5,189.5",
		width=2.5417];
	intervals -> downsample_and_recall	[_draw_="c 7 -#000000 B 10 60.51 223.62 66.4 220.52 73.37 217.22 80 215 119.43 201.79 130.65 202.39 172 198 263.17 188.31 516.25 183.84 658.19 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 658.06 184.49 665.02 181.96 657.99 179.59 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 190 200.6 0 36 9 -intervals ",
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		lp="190,202.5",
		pos="e,666.54,181.94 60.508,223.62 66.397,220.52 73.367,217.22 80,215 119.43,201.79 130.65,202.39 172,198 263.17,188.31 516.25,183.84 \
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	variant_index_type -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 156.49 223.64 178.75 215.41 214.72 203.34 247 198 323.32 185.37 532.59 182.06 658.4 181.23 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 658.06 183.68 665.05 181.19 658.03 178.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 285 200.6 0 76 18 -variant_index_type ",
		label=variant_index_type,
		lp="285,202.5",
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	qc_minimum_base_quality -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 284.09 223.65 300.81 215.43 327.98 203.36 353 198 409.05 185.98 557.79 182.37 658.54 181.34 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 658.43 183.79 665.41 181.27 658.38 178.89 ",
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		label=qc_minimum_base_quality,
		lp="406.5,202.5",
		pos="e,666.92,181.26 284.09,223.65 300.81,215.43 327.98,203.36 353,198 409.05,185.98 557.79,182.37 658.54,181.34"];
	qc_minimum_mapping_quality -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 438.9 223.53 448.12 215.35 463.35 203.43 479 198 511.15 186.85 591.82 182.82 658.19 181.45 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 658.15 183.9 665.11 181.31 658.06 179 ",
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		label=qc_minimum_mapping_quality,
		lp="540.5,202.5",
		pos="e,666.62,181.29 438.9,223.53 448.12,215.35 463.35,203.43 479,198 511.15,186.85 591.82,182.82 658.19,181.45"];
	downsample_seed -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 580.4 223.75 590.11 215.73 606.04 203.94 622 198 633.53 193.71 645.94 190.46 658.41 188.01 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 658.68 190.45 665.12 186.78 657.8 185.63 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 660.5 200.6 0 77 15 -downsample_seed ",
		label=downsample_seed,
		lp="660.5,202.5",
		pos="e,666.61,186.51 580.4,223.75 590.11,215.73 606.04,203.94 622,198 633.53,193.71 645.94,190.46 658.41,188.01"];
	reference -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 672.83 223.62 684.19 216.37 701.35 205.86 717 198 720.6 196.19 724.44 194.42 728.26 192.73 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 729.16 195.01 734.64 190.02 727.24 190.5 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 737 200.6 0 40 9 -reference ",
		label=reference,
		lp="737,202.5",
		pos="e,736.03,189.42 672.83,223.62 684.19,216.37 701.35,205.86 717,198 720.6,196.19 724.44,194.42 728.26,192.73"];
	max_alternate_alleles -> downsample_and_recall	[_draw_="c 7 -#000000 B 4 758 223.58 758 216.52 758 206.24 758 197.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 760.45 197.78 758 190.78 755.55 197.78 ",
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		label=max_alternate_alleles,
		lp="803,202.5",
		pos="e,758,189.26 758,223.58 758,216.52 758,206.24 758,197.55"];
	read_filter -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 858.16 223.75 857.84 215.98 856.07 204.56 849 198 846.41 195.59 842.02 193.51 836.53 191.72 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 837.28 189.38 829.88 189.85 835.95 194.1 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 875 200.6 0 42 11 -read_filter ",
		label=read_filter,
		lp="875,202.5",
		pos="e,828.42,189.44 858.16,223.75 857.84,215.98 856.07,204.56 849,198 846.41,195.59 842.02,193.51 836.53,191.72"];
	emit_reference_confidence -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 955.43 223.54 941.07 215.61 918.24 204.08 897 198 884.42 194.4 870.98 191.56 857.61 189.32 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 858.09 186.92 850.79 188.24 857.32 191.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 975 200.6 0 112 25 -emit_reference_confidence ",
		label=emit_reference_confidence,
		lp="975,202.5",
		pos="e,849.3,188.01 955.43,223.54 941.07,215.61 918.24,204.08 897,198 884.42,194.4 870.98,191.56 857.61,189.32"];
	downsample_strategy -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 1095.81 223.58 1080.29 215.44 1055.24 203.54 1032 198 999.82 190.32 921.98 185.97 857.45 183.6 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 857.85 181.16 850.76 183.36 857.67 186.06 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1103.5 200.6 0 91 19 -downsample_strategy ",
		label=downsample_strategy,
		lp="1103.5,202.5",
		pos="e,849.25,183.31 1095.8,223.58 1080.3,215.44 1055.2,203.54 1032,198 999.82,190.32 921.98,185.97 857.45,183.6"];
	crams_to_downsample -> downsample_and_recall	[_draw_="c 7 -#000000 B 10 1353.17 223.55 1324.17 216.3 1287.05 207.02 1287 207 1280.6 204.1 1280.67 200.21 1274 198 1235.72 185.35 996.38 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 857.85 178.81 850.83 181.22 857.82 183.71 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1334 200.6 0 94 19 -crams_to_downsample ",
		label=crams_to_downsample,
		lp="1334,202.5",
		pos="e,849.32,181.21 1353.2,223.55 1324.2,216.3 1287,207.02 1287,207 1280.6,204.1 1280.7,200.21 1274,198 1235.7,185.35 996.38,182.08 \
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	gather_results	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1059 80.5 1059 99.5 1145 99.5 1145 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1102 87.5 0 70 14 -gather_results ",
		height=0.27778,
		label=gather_results,
		pos="1102,90",
		rects="1059,80.5,1145,99.5",
		width=1.1944];
	crams_to_downsample -> gather_results	[_draw_="c 7 -#000000 B 7 1386.86 223.74 1386.3 216.17 1384.35 205.1 1378 198 1319.22 132.3 1215.28 106.6 1153.1 96.8 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1153.77 94.42 1146.48 95.8 1153.04 99.27 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1345.5 155.6 0 25 6 -outdir ",
		label=outdir,
		lp="1345.5,157.5",
		pos="e,1145,95.573 1386.9,223.74 1386.3,216.17 1384.4,205.1 1378,198 1319.2,132.3 1215.3,106.6 1153.1,96.8"];
	variant_index_parameter -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 1223.6 223.52 1194.65 213.47 1150.24 198.05 1150 198 1096.12 187.71 954.88 183.64 857.53 182.04 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 857.68 179.59 850.64 181.93 857.6 184.49 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1223.5 200.6 0 101 23 -variant_index_parameter ",
		label=variant_index_parameter,
		lp="1223.5,202.5",
		pos="e,849.13,181.9 1223.6,223.52 1194.7,213.47 1150.2,198.05 1150,198 1096.1,187.71 954.88,183.64 857.53,182.04"];
	join_results	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 781.5 125.5 781.5 144.5 854.5 144.5 854.5 125.5 ",
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		height=0.27778,
		label=join_results,
		pos="818,135",
		rects="781.5,125.5,854.5,144.5",
		width=1.0139];
	downsample_and_recall -> join_results	[_draw_="c 7 -#000000 B 7 797.84 170.53 802.34 168.32 806.54 165.52 810 162 812.61 159.35 814.37 155.87 815.55 152.32 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 817.88 153.12 817.07 145.75 813.11 152.01 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 826 155.6 0 22 5 -gvcfs ",
		label=gvcfs,
		lp="826,157.5",
		pos="e,817.42,144.27 797.84,170.53 802.34,168.32 806.54,165.52 810,162 812.61,159.35 814.37,155.87 815.55,152.32"];
	downsample_and_recall -> join_results	[_draw_="c 7 -#000000 B 7 755.65 170.93 754.55 165.34 754.19 158.04 758 153 761.99 147.72 767.51 143.99 773.58 141.37 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 774.27 143.73 780.08 139.12 772.66 139.1 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 783.5 155.6 0 51 11 -wgs_metrics ",
		label=wgs_metrics,
		lp="783.5,157.5",
		pos="e,781.51,138.62 755.65,170.93 754.55,165.34 754.19,158.04 758,153 761.99,147.72 767.51,143.99 773.58,141.37"];
	join_results -> gather_results	[_draw_="c 7 -#000000 B 4 854.26 128.51 904.14 120.96 994.19 107.32 1050.89 98.74 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1050.96 101.21 1057.51 97.74 1050.22 96.36 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 994 110.6 0 18 5 -files ",
		label=files,
		lp="994,112.5",
		pos="e,1059,97.509 854.26,128.51 904.14,120.96 994.19,107.32 1050.9,98.738"];
	gather_results -> result_directories	[_draw_="c 7 -#000000 B 4 1102 80.71 1102 75.59 1102 68.85 1102 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1104.45 62.78 1102 55.78 1099.55 62.78 ",
		pos="e,1102,54.265 1102,80.709 1102,75.593 1102,68.848 1102,62.666"];
}