digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 233 1259 233 1259 0 ",
		bb="0,0,1259,233",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
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	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
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	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 170 8 225 1251 225 1251 170 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 213 0 84 15 -Workflow Inputs ",
			bb="8,170,1251,225",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,215.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		reference	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 340.5 178.5 340.5 197.5 403.5 197.5 403.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 372 185.5 0 47 9 -reference ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=reference,
			pos="372,188",
			rects="340.5,178.5,403.5,197.5",
			width=0.875];
		qc_minimum_mapping_quality	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16.5 178.5 16.5 197.5 183.5 197.5 183.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 100 185.5 0 151 26 -qc_minimum_mapping_quality ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=qc_minimum_mapping_quality,
			pos="100,188",
			rects="16.5,178.5,183.5,197.5",
			width=2.3194];
		crams_to_downsample	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 407.5 178.5 407.5 197.5 536.5 197.5 536.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 472 185.5 0 113 19 -crams_to_downsample ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=crams_to_downsample,
			pos="472,188",
			rects="407.5,178.5,536.5,197.5",
			width=1.7917];
		downsample_seed	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 540.5 178.5 540.5 197.5 647.5 197.5 647.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 594 185.5 0 91 15 -downsample_seed ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=downsample_seed,
			pos="594,188",
			rects="540.5,178.5,647.5,197.5",
			width=1.4861];
		ploidy	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 780.5 178.5 780.5 197.5 827.5 197.5 827.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 804 185.5 0 31 6 -ploidy ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=ploidy,
			pos="804,188",
			rects="780.5,178.5,827.5,197.5",
			width=0.65278];
		emit_reference_confidence	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 831.5 178.5 831.5 197.5 980.5 197.5 980.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 906 185.5 0 133 25 -emit_reference_confidence ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=emit_reference_confidence,
			pos="906,188",
			rects="831.5,178.5,980.5,197.5",
			width=2.0694];
		downsample_strategy	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 651.5 178.5 651.5 197.5 776.5 197.5 776.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 714 185.5 0 109 19 -downsample_strategy ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=downsample_strategy,
			pos="714,188",
			rects="651.5,178.5,776.5,197.5",
			width=1.7361];
		qc_minimum_base_quality	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 188 178.5 188 197.5 336 197.5 336 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 262 185.5 0 132 23 -qc_minimum_base_quality ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=qc_minimum_base_quality,
			pos="262,188",
			rects="188,178.5,336,197.5",
			width=2.0556];
		max_alternate_alleles	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 984.5 178.5 984.5 197.5 1109.5 197.5 1109.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1047 185.5 0 109 21 -max_alternate_alleles ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=max_alternate_alleles,
			pos="1047,188",
			rects="984.5,178.5,1109.5,197.5",
			width=1.7361];
		intervals	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1113.5 178.5 1113.5 197.5 1172.5 197.5 1172.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1143 185.5 0 43 9 -intervals ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=intervals,
			pos="1143,188",
			rects="1113.5,178.5,1172.5,197.5",
			width=0.81944];
		read_filter	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1177 178.5 1177 197.5 1243 197.5 1243 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1210 185.5 0 50 11 -read_filter ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=read_filter,
			pos="1210,188",
			rects="1177,178.5,1243,197.5",
			width=0.91667];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 542 8 542 63 684 63 684 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 596 15 0 92 16 -Workflow Outputs ",
			bb="542,8,684,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="596,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		gvcfs	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 632.5 35.5 632.5 54.5 675.5 54.5 675.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 654 42.5 0 27 5 -gvcfs ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=gvcfs,
			pos="654,45",
			rects="632.5,35.5,675.5,54.5",
			width=0.59722];
		wgs_metrics	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 550 35.5 550 54.5 628 54.5 628 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 589 42.5 0 62 11 -wgs_metrics ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=wgs_metrics,
			pos="589,45",
			rects="550,35.5,628,54.5",
			width=1.0833];
	}
	downsample	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 571.5 125.5 571.5 144.5 726.5 144.5 726.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 649 132.5 0 139 24 -downsample unaligned BAM ",
		height=0.27778,
		label="downsample unaligned BAM",
		pos="649,135",
		rects="571.5,125.5,726.5,144.5",
		width=2.1528];
	reference -> downsample	[_draw_="c 7 -#000000 B 7 388.24 178.62 394.34 175.66 401.39 172.46 408 170 472.95 145.81 494.74 151.4 565.19 145.23 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 565.3 147.68 572.05 144.6 564.85 142.8 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 487 155.6 0 40 9 -reference ",
		label=reference,
		lp="487,157.5",
		pos="e,573.55,144.46 388.24,178.62 394.34,175.66 401.39,172.46 408,170 472.95,145.81 494.74,151.4 565.19,145.23"];
	collect_wgs_metrics	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 397.5 80.5 397.5 99.5 512.5 99.5 512.5 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 455 87.5 0 99 19 -collect WGS metrics ",
		height=0.27778,
		label="collect WGS metrics",
		pos="455,90",
		rects="397.5,80.5,512.5,99.5",
		width=1.5972];
	reference -> collect_wgs_metrics	[_draw_="c 7 -#000000 B 4 379.08 178.82 393.09 162.6 424.56 126.2 442.27 105.72 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 443.99 107.48 446.71 100.58 440.28 104.28 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 444 133.1 0 40 9 -reference ",
		label=reference,
		lp="444,135",
		pos="e,447.7,99.438 379.08,178.82 393.09,162.6 424.56,126.2 442.27,105.72"];
	haplotype_caller	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 609 80.5 609 99.5 841 99.5 841 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 725 87.5 0 216 43 -scatter GATK HaplotypeCaller over intervals ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="scatter GATK HaplotypeCaller over intervals",
		pos="725,90",
		rects="609,80.5,841,99.5",
		width=3.2222];
	reference -> haplotype_caller	[_draw_="c 7 -#000000 B 10 368.16 178.62 362.79 165.49 355.06 140.05 368 125 400.82 86.82 429.96 113.52 480 108 519.27 103.66 562.21 100.24 \
601.02 97.64 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 600.9 100.1 607.72 97.19 600.57 95.21 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 388 133.1 0 40 9 -reference ",
		label=reference,
		lp="388,135",
		pos="e,609.23,97.093 368.16,178.62 362.79,165.49 355.06,140.05 368,125 400.82,86.821 429.96,113.52 480,108 519.27,103.66 562.21,100.24 \
601.02,97.636"];
	qc_minimum_mapping_quality -> collect_wgs_metrics	[_draw_="c 7 -#000000 B 7 103.54 178.9 109.99 165.21 125.04 137.75 147 125 186.84 101.87 311.22 94.47 389.19 92.11 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 389.09 94.56 396.01 91.91 388.95 89.66 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 201.5 133.1 0 109 23 -minimum_mapping_quality ",
		label=minimum_mapping_quality,
		lp="201.5,135",
		pos="e,397.53,91.867 103.54,178.9 109.99,165.21 125.04,137.75 147,125 186.84,101.87 311.22,94.469 389.19,92.106"];
	crams_to_downsample -> downsample	[_draw_="c 7 -#000000 B 7 495.78 178.57 516.74 171.3 548.19 160.77 576 153 584.26 150.69 593.11 148.45 601.7 146.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 602.1 148.8 608.35 144.81 600.97 144.04 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 598 155.6 0 44 11 -probability ",
		label=probability,
		lp="598,157.5",
		pos="e,609.82,144.46 495.78,178.57 516.74,171.3 548.19,160.77 576,153 584.26,150.69 593.11,148.45 601.7,146.38"];
	crams_to_downsample -> downsample	[_draw_="c 7 -#000000 B 7 482.9 178.52 493.71 170.57 511.07 159.04 528 153 532.83 151.28 551.26 148.43 572.33 145.56 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 572.4 148.02 579.01 144.66 571.75 143.16 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 537 155.6 0 18 3 -sam ",
		label=sam,
		lp="537,157.5",
		pos="e,580.51,144.46 482.9,178.52 493.71,170.57 511.07,159.04 528,153 532.83,151.28 551.26,148.43 572.33,145.56"];
	crams_to_downsample -> haplotype_caller	[_draw_="c 7 -#000000 B 10 469.95 178.59 467.35 165.87 464.39 141.49 475 125 483.93 111.13 492.13 112.51 508 108 526.07 102.86 562.84 99.15 \
601.05 96.53 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 600.89 99 607.71 96.09 600.57 94.11 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 522.5 133.1 0 95 22 -contamination_fraction ",
		label=contamination_fraction,
		lp="522.5,135",
		pos="e,609.22,95.993 469.95,178.59 467.35,165.87 464.39,141.49 475,125 483.93,111.13 492.13,112.51 508,108 526.07,102.86 562.84,99.153 \
601.05,96.535"];
	downsample_seed -> downsample	[_draw_="c 7 -#000000 B 4 603.08 178.58 611.49 170.78 624.15 159.04 634.05 149.86 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 635.51 151.85 638.98 145.29 632.18 148.26 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 657 155.6 0 56 11 -random_seed ",
		label=random_seed,
		lp="657,157.5",
		pos="e,640.09,144.26 603.08,178.58 611.49,170.78 624.15,159.04 634.05,149.86"];
	ploidy -> haplotype_caller	[_draw_="c 7 -#000000 B 7 800.1 178.79 792.51 163.47 774.52 130.07 752 108 750.68 106.71 749.25 105.47 747.76 104.28 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 749.33 102.39 742.2 100.35 746.5 106.4 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 792.5 133.1 0 25 6 -ploidy ",
		label=ploidy,
		lp="792.5,135",
		pos="e,740.97,99.479 800.1,178.79 792.51,163.47 774.52,130.07 752,108 750.68,106.71 749.25,105.47 747.76,104.28"];
	emit_reference_confidence -> haplotype_caller	[_draw_="c 7 -#000000 B 7 893.74 178.52 875.24 165.92 838.86 141.95 806 125 789.73 116.61 770.9 108.61 755.49 102.48 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 756.6 100.28 749.19 100 754.81 104.84 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 896 133.1 0 112 25 -emit_reference_confidence ",
		label=emit_reference_confidence,
		lp="896,135",
		pos="e,747.78,99.451 893.74,178.52 875.24,165.92 838.86,141.95 806,125 789.73,116.61 770.9,108.61 755.49,102.48"];
	downsample_strategy -> downsample	[_draw_="c 7 -#000000 B 7 708.65 178.53 703.57 171.03 695.33 160.19 686 153 683.82 151.32 681.44 149.75 678.98 148.31 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 680.13 146.15 672.79 145.05 677.84 150.48 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 711 155.6 0 34 8 -strategy ",
		label=strategy,
		lp="711,157.5",
		pos="e,671.45,144.35 708.65,178.53 703.57,171.03 695.33,160.19 686,153 683.82,151.32 681.44,149.75 678.98,148.31"];
	qc_minimum_base_quality -> collect_wgs_metrics	[_draw_="c 7 -#000000 B 7 259.47 178.58 256.09 165.41 251.91 139.89 265 125 281.21 106.56 341.1 98.09 389.37 94.22 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 389.32 96.68 396.11 93.71 388.94 91.79 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 312 133.1 0 94 20 -minimum_base_quality ",
		label=minimum_base_quality,
		lp="312,135",
		pos="e,397.62,93.592 259.47,178.58 256.09,165.41 251.91,139.89 265,125 281.21,106.56 341.1,98.09 389.37,94.219"];
	max_alternate_alleles -> haplotype_caller	[_draw_="c 7 -#000000 B 7 1037.38 178.54 1021.19 164.84 986.96 138 953 125 920.39 112.52 883.52 104.59 849.08 99.57 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 849.62 97.17 842.35 98.63 848.94 102.03 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1036 133.1 0 90 21 -max_alternate_alleles ",
		label=max_alternate_alleles,
		lp="1036,135",
		pos="e,840.85,98.419 1037.4,178.54 1021.2,164.84 986.96,138 953,125 920.39,112.52 883.52,104.59 849.08,99.572"];
	intervals -> haplotype_caller	[_draw_="c 7 -#000000 B 7 1137.79 178.8 1128.49 164.96 1107.59 137.28 1082 125 1041.9 105.75 935.34 97.4 849.01 93.77 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 849.32 91.34 842.23 93.5 849.13 96.23 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1127 133.1 0 36 9 -intervals ",
		label=intervals,
		lp="1127,135",
		pos="e,840.72,93.439 1137.8,178.8 1128.5,164.96 1107.6,137.28 1082,125 1041.9,105.75 935.34,97.399 849.01,93.775"];
	read_filter -> haplotype_caller	[_draw_="c 7 -#000000 B 7 1204.03 178.52 1193.85 164.79 1171.72 137.9 1146 125 1095.71 99.77 954.41 92.57 849.3 90.85 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 849.39 88.4 842.36 90.75 849.32 93.3 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1194 133.1 0 42 11 -read_filter ",
		label=read_filter,
		lp="1194,135",
		pos="e,840.84,90.722 1204,178.52 1193.9,164.79 1171.7,137.9 1146,125 1095.7,99.767 954.41,92.569 849.3,90.85"];
	downsample -> collect_wgs_metrics	[_draw_="c 7 -#000000 B 7 588.51 125.52 573.87 123.1 558.32 120.24 544 117 525.51 112.82 505.21 106.99 488.66 101.9 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 489.73 99.67 482.32 99.93 488.27 104.35 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 573 110.6 0 58 11 -sample_name ",
		label=sample_name,
		lp="573,112.5",
		pos="e,480.87,99.478 588.51,125.52 573.87,123.1 558.32,120.24 544,117 525.51,112.82 505.21,106.99 488.66,101.9"];
	downsample -> collect_wgs_metrics	[_draw_="c 7 -#000000 B 7 635.98 125.56 626.21 119.64 612.28 112.09 599 108 574.03 100.32 545.65 96.07 520.71 93.73 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 521.09 91.31 513.91 93.14 520.67 96.19 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 629.5 110.6 0 19 3 -bam ",
		label=bam,
		lp="629.5,112.5",
		pos="e,512.4,93.014 635.98,125.56 626.21,119.64 612.28,112.09 599,108 574.03,100.32 545.65,96.07 520.71,93.735"];
	downsample -> haplotype_caller	[_draw_="c 7 -#000000 B 7 652.9 125.59 655.97 119.85 660.77 112.5 667 108 669.7 106.05 672.62 104.33 675.66 102.8 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 676.63 105.05 682.05 99.99 674.66 100.56 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 676.5 110.6 0 19 3 -bam ",
		label=bam,
		lp="676.5,112.5",
		pos="e,683.44,99.385 652.9,125.59 655.97,119.85 660.77,112.5 667,108 669.7,106.05 672.62,104.33 675.66,102.8"];
	downsample -> haplotype_caller	[_draw_="c 7 -#000000 B 7 666.46 125.65 671.82 122.99 677.7 119.96 683 117 690.37 112.89 698.28 108.1 705.23 103.75 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 706.43 105.89 711.03 100.08 703.81 101.75 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 725.5 110.6 0 55 13 -output_prefix ",
		label=output_prefix,
		lp="725.5,112.5",
		pos="e,712.31,99.271 666.46,125.65 671.82,122.99 677.7,119.96 683,117 690.37,112.89 698.28,108.1 705.23,103.75"];
	collect_wgs_metrics -> wgs_metrics	[_draw_="c 7 -#000000 B 4 481.47 80.5 502.4 73.79 531.76 64.37 554.52 57.06 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 555.22 59.41 561.14 54.94 553.73 54.75 ",
		pos="e,562.58,54.478 481.47,80.505 502.4,73.791 531.76,64.366 554.52,57.063"];
	haplotype_caller -> gvcfs	[_draw_="c 7 -#000000 B 4 710.97 80.5 700.76 74.32 686.76 65.84 675.19 58.83 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 676.55 56.79 669.29 55.26 674.01 60.98 ",
		pos="e,668,54.478 710.97,80.505 700.76,74.321 686.76,65.838 675.19,58.83"];
}