digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 233 564 233 564 0 ",
		bb="0,0,564,233",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
	];
	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 170 8 225 556 225 556 170 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 213 0 84 15 -Workflow Inputs ",
			bb="8,170,556,225",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,215.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		mills	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16.5 178.5 16.5 197.5 57.5 197.5 57.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 37 185.5 0 25 5 -mills ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=mills,
			pos="37,188",
			rects="16.5,178.5,57.5,197.5",
			width=0.56944];
		bams	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 62 178.5 62 197.5 106 197.5 106 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 84 185.5 0 28 4 -bams ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=bams,
			pos="84,188",
			rects="62,178.5,106,197.5",
			width=0.61111];
		known_indels	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 318.5 178.5 318.5 197.5 401.5 197.5 401.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 360 185.5 0 67 12 -known_indels ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=known_indels,
			pos="360,188",
			rects="318.5,178.5,401.5,197.5",
			width=1.1528];
		downsample_probability	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 110.5 178.5 110.5 197.5 247.5 197.5 247.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 179 185.5 0 121 22 -downsample_probability ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=downsample_probability,
			pos="179,188",
			rects="110.5,178.5,247.5,197.5",
			width=1.9028];
		dbsnp_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 406 178.5 406 197.5 472 197.5 472 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 439 185.5 0 50 9 -dbsnp_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=dbsnp_vcf,
			pos="439,188",
			rects="406,178.5,472,197.5",
			width=0.91667];
		reference	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 251.5 178.5 251.5 197.5 314.5 197.5 314.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 283 185.5 0 47 9 -reference ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=reference,
			pos="283,188",
			rects="251.5,178.5,314.5,197.5",
			width=0.875];
		readgroups	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 476.5 178.5 476.5 197.5 547.5 197.5 547.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 512 185.5 0 55 10 -readgroups ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=readgroups,
			pos="512,188",
			rects="476.5,178.5,547.5,197.5",
			width=0.98611];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 243 8 243 63 461 63 461 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 297 15 0 92 16 -Workflow Outputs ",
			bb="243,8,461,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="297,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		bam	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 251 35.5 251 54.5 289 54.5 289 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 270 42.5 0 22 3 -bam ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=bam,
			pos="270,45",
			rects="251,35.5,289,54.5",
			width=0.52778];
		mark_duplicates_metrics_file	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 293 35.5 293 54.5 453 54.5 453 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 373 42.5 0 144 28 -mark_duplicates_metrics_file ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=mark_duplicates_metrics_file,
			pos="373,45",
			rects="293,35.5,453,54.5",
			width=2.2222];
	}
	align_workflow	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 254 80.5 254 99.5 388 99.5 388 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 321 87.5 0 118 21 -Unaligned BAM to BQSR ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="Unaligned BAM to BQSR",
		pos="321,90",
		rects="254,80.5,388,99.5",
		width=1.8611];
	mills -> align_workflow	[_draw_="c 7 -#000000 B 7 42.03 178.93 51.02 165.29 71.22 137.9 96 125 121.5 111.72 190.72 102.55 245.71 97.11 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 245.82 99.56 252.55 96.45 245.35 94.69 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 105.5 133.1 0 19 5 -mills ",
		label=mills,
		lp="105.5,135",
		pos="e,254.06,96.304 42.033,178.93 51.018,165.29 71.223,137.9 96,125 121.5,111.72 190.72,102.55 245.71,97.113"];
	downsample	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 117.5 125.5 117.5 144.5 272.5 144.5 272.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 195 132.5 0 139 24 -downsample unaligned BAM ",
		height=0.27778,
		label="downsample unaligned BAM",
		pos="195,135",
		rects="117.5,125.5,272.5,144.5",
		width=2.1528];
	bams -> downsample	[_draw_="c 7 -#000000 B 7 95.87 178.53 100.2 175.63 105.22 172.49 110 170 126.84 161.24 146.47 153.25 162.62 147.22 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 163.1 149.66 168.82 144.95 161.41 145.06 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 155.5 155.6 0 19 3 -bam ",
		label=bam,
		lp="155.5,157.5",
		pos="e,170.25,144.42 95.868,178.53 100.2,175.63 105.22,172.49 110,170 126.84,161.24 146.47,153.25 162.62,147.22"];
	known_indels -> align_workflow	[_draw_="c 7 -#000000 B 7 358.78 178.67 356.79 166.48 352.23 143.24 344 125 341.03 118.42 336.82 111.73 332.8 106.04 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 334.96 104.85 328.83 100.67 331.02 107.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 379 133.1 0 56 12 -known_indels ",
		label=known_indels,
		lp="379,135",
		pos="e,327.93,99.457 358.78,178.67 356.79,166.48 352.23,143.24 344,125 341.03,118.42 336.82,111.73 332.8,106.04"];
	downsample_probability -> downsample	[_draw_="c 7 -#000000 B 4 181.64 178.58 183.88 171.45 187.15 161.02 189.89 152.27 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 192.2 153.12 191.95 145.71 187.52 151.65 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 211 155.6 0 44 11 -probability ",
		label=probability,
		lp="211,157.5",
		pos="e,192.41,144.26 181.64,178.58 183.88,171.45 187.15,161.02 189.89,152.27"];
	dbsnp_vcf -> align_workflow	[_draw_="c 7 -#000000 B 7 436.9 178.59 433.21 165.43 424.35 139.93 408 125 396.58 114.58 381.6 107.2 367.29 102.05 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 368.29 99.8 360.88 99.89 366.73 104.44 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 444 133.1 0 42 9 -dbsnp_vcf ",
		label=dbsnp_vcf,
		lp="444,135",
		pos="e,359.44,99.41 436.9,178.59 433.21,165.43 424.35,139.93 408,125 396.58,114.58 381.6,107.2 367.29,102.05"];
	reference -> downsample	[_draw_="c 7 -#000000 B 10 270.64 178.7 263.44 173.85 254.19 167.6 246 162 240.2 158.03 239.12 156.45 233 153 229.95 151.28 226.7 149.61 \
223.43 148.02 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 224.6 145.87 217.22 145.14 222.54 150.31 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 266 155.6 0 40 9 -reference ",
		label=reference,
		lp="266,157.5",
		pos="e,215.85,144.5 270.64,178.7 263.44,173.85 254.19,167.6 246,162 240.2,158.03 239.12,156.45 233,153 229.95,151.28 226.7,149.61 223.43,\
148.02"];
	reference -> align_workflow	[_draw_="c 7 -#000000 B 7 286.2 178.55 290.75 166.6 299.38 144.08 307 125 309.35 119.11 311.99 112.66 314.34 106.98 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 316.5 108.17 316.92 100.76 311.97 106.29 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 327 133.1 0 40 9 -reference ",
		label=reference,
		lp="327,135",
		pos="e,317.5,99.363 286.2,178.55 290.75,166.6 299.38,144.08 307,125 309.35,119.11 311.99,112.66 314.34,106.98"];
	readgroups -> align_workflow	[_draw_="c 7 -#000000 B 7 508.24 178.7 501.68 165.22 486.83 138.69 466 125 445.32 111.41 419.83 103.23 396.02 98.31 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 396.51 95.91 389.17 96.99 395.58 100.72 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 511 133.1 0 48 10 -readgroups ",
		label=readgroups,
		lp="511,135",
		pos="e,387.68,96.704 508.24,178.7 501.68,165.22 486.83,138.69 466,125 445.32,111.41 419.83,103.23 396.02,98.311"];
	downsample -> align_workflow	[_draw_="c 7 -#000000 B 7 215.68 125.6 229.07 120.28 246.95 113.41 263 108 269.22 105.9 275.87 103.81 282.36 101.86 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 282.99 104.23 289 99.89 281.6 99.53 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 274.5 110.6 0 23 4 -bams ",
		label=bams,
		lp="274.5,112.5",
		pos="e,290.45,99.456 215.68,125.6 229.07,120.28 246.95,113.41 263,108 269.22,105.9 275.87,103.81 282.36,101.86"];
	align_workflow -> bam	[_draw_="c 7 -#000000 B 4 311.17 80.71 304.11 74.76 294.44 66.61 286.25 59.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 287.89 57.88 280.96 55.24 284.73 61.63 ",
		pos="e,279.8,54.265 311.17,80.709 304.11,74.76 294.44,66.609 286.25,59.701"];
	align_workflow -> mark_duplicates_metrics_file	[_draw_="c 7 -#000000 B 4 331.27 80.5 338.4 74.62 348.04 66.64 356.26 59.84 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 357.75 61.79 361.58 55.44 354.63 58.02 ",
		pos="e,362.75,54.478 331.27,80.505 338.4,74.615 348.04,66.64 356.26,59.841"];
}