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	strand -> kallisto	[_draw_="c 7 -#000000 B 7 1442.31 268.63 1437.7 265.61 1432.26 262.36 1427 260 1297.06 201.72 1132.72 163.23 1050.24 146.14 ",
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	strand -> stringtie	[_draw_="c 7 -#000000 B 4 1455.49 268.6 1459.53 245.82 1470.75 182.55 1476.09 152.39 ",
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		lp="1480.5,202.5",
		pos="e,1477.6,144.18 1455.5,268.6 1459.5,245.82 1470.7,182.55 1476.1,152.39"];
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	refFlat -> generate_qc_metrics	[_draw_="c 7 -#000000 B 10 1838.21 268.71 1837.32 258.62 1836 241.08 1836 226 1836 226 1836 226 1836 134 1836 116.86 1823.7 106.43 1807.61 \
100.12 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1808.82 97.95 1801.41 97.99 1807.23 102.58 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1849.5 178.1 0 27 7 -refFlat ",
		label=refFlat,
		lp="1849.5,180",
		pos="e,1800,97.503 1838.2,268.71 1837.3,258.62 1836,241.08 1836,226 1836,226 1836,226 1836,134 1836,116.86 1823.7,106.43 1807.6,100.12"];
	sample_name -> stringtie	[_draw_="c 7 -#000000 B 7 1650.06 268.52 1649.72 252.74 1646.82 218.61 1629 198 1600.25 164.75 1550.84 149 1516.63 141.77 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1517.54 139.45 1510.19 140.49 1516.58 144.26 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1664 200.6 0 58 11 -sample_name ",
		label=sample_name,
		lp="1664,202.5",
		pos="e,1508.7,140.19 1650.1,268.52 1649.7,252.74 1646.8,218.61 1629,198 1600.3,164.75 1550.8,149 1516.6,141.77"];
	trimming_max_uncalled -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 7 467.84 268.56 480.08 265.59 494.12 262.4 507 260 628.83 237.25 770.23 229.37 869.91 226.8 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 869.77 229.26 876.7 226.64 869.65 224.36 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 641.5 245.6 0 57 12 -max_uncalled ",
		label=max_uncalled,
		lp="641.5,247.5",
		pos="e,878.22,226.6 467.84,268.56 480.08,265.59 494.12,262.4 507,260 628.83,237.25 770.23,229.37 869.91,226.8"];
	instrument_data_bams -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 7 602.81 268.51 614.46 265.58 627.78 262.42 640 260 715.48 245.06 801.25 236.62 869.92 231.89 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 869.87 234.35 876.69 231.44 869.54 229.46 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 756.5 245.6 0 19 3 -bam ",
		label=bam,
		lp="756.5,247.5",
		pos="e,878.2,231.33 602.81,268.51 614.46,265.58 627.78,262.42 640,260 715.48,245.06 801.25,236.62 869.92,231.89"];
	read_group_fields -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 10 718 268.57 727.18 265.77 737.52 262.68 747 260 775.74 251.88 782.59 248.15 812 243 830.58 239.74 850.33 237.09 \
869.75 234.93 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 869.85 237.38 876.54 234.2 869.32 232.51 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 848.5 245.6 0 73 17 -read_group_fields ",
		label=read_group_fields,
		lp="848.5,247.5",
		pos="e,878.05,234.04 718,268.57 727.18,265.77 737.52,262.68 747,260 775.74,251.88 782.59,248.15 812,243 830.58,239.74 850.33,237.09 869.75,\
234.93"];
	kallisto_index -> kallisto	[_draw_="c 7 -#000000 B 7 242.35 268.56 250.25 265.52 259.45 262.29 268 260 517.24 193.4 824.32 155.02 945.39 141.54 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 945.59 143.98 952.28 140.78 945.05 139.11 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 577.5 200.6 0 55 14 -kallisto_index ",
		label=kallisto_index,
		lp="577.5,202.5",
		pos="e,953.78,140.61 242.35,268.56 250.25,265.52 259.45,262.29 268,260 517.24,193.4 824.32,155.02 945.39,141.54"];
	transcript_to_gene	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 814.5 80.5 814.5 99.5 957.5 99.5 957.5 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 886 87.5 0 127 26 -Kallisto: TranscriptToGene ",
		height=0.27778,
		label="Kallisto: TranscriptToGene",
		pos="886,90",
		rects="814.5,80.5,957.5,99.5",
		width=1.9861];
	gene_transcript_lookup_table -> transcript_to_gene	[_draw_="c 7 -#000000 B 10 97.05 268.71 98.24 258.63 100 241.1 100 226 100 226 100 226 100 134 100 98.91 606.11 92.45 806.09 91.26 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 806.01 93.71 813 91.22 805.99 88.81 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 160.5 178.1 0 121 28 -gene_transcript_lookup_table ",
		label=gene_transcript_lookup_table,
		lp="160.5,180",
		pos="e,814.51,91.215 97.051,268.71 98.236,258.63 100,241.1 100,226 100,226 100,226 100,134 100,98.908 606.11,92.446 806.09,91.263"];
	trimming_adapter_min_overlap -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 7 848.56 268.64 864.28 261 888.75 249.88 911 243 919.25 240.45 928.05 238.2 936.78 236.25 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 937.29 238.64 943.62 234.78 936.27 233.85 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 954 245.6 0 86 19 -adapter_min_overlap ",
		label=adapter_min_overlap,
		lp="954,247.5",
		pos="e,945.1,234.46 848.56,268.64 864.28,261 888.75,249.88 911,243 919.25,240.45 928.05,238.2 936.78,236.25"];
	trimming_adapter_trim_end -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 4 998 268.58 998 261.52 998 251.24 998 242.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1000.45 242.78 998 235.78 995.55 242.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1034 245.6 0 72 16 -adapter_trim_end ",
		label=adapter_trim_end,
		lp="1034,247.5",
		pos="e,998,234.26 998,268.58 998,261.52 998,251.24 998,242.55"];
	reference_annotation -> stringtie	[_draw_="c 7 -#000000 B 7 1542.14 268.55 1542.38 246.27 1542.04 186.49 1532 170 1526.39 160.79 1517.24 153.63 1508.1 148.31 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1509.51 146.28 1502.18 145.14 1507.2 150.6 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1584.5 200.6 0 89 20 -reference_annotation ",
		label=reference_annotation,
		lp="1584.5,202.5",
		pos="e,1500.8,144.43 1542.1,268.55 1542.4,246.27 1542,186.49 1532,170 1526.4,160.79 1517.2,153.63 1508.1,148.31"];
	merge	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1344 170.5 1344 189.5 1454 189.5 1454 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1399 177.5 0 94 15 -Sambamba: merge ",
		height=0.27778,
		label="Sambamba: merge",
		pos="1399,180",
		rects="1344,170.5,1454,189.5",
		width=1.5278];
	index_bam	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1353 125.5 1353 144.5 1445 144.5 1445 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1399 132.5 0 76 14 -samtools index ",
		height=0.27778,
		label="samtools index",
		pos="1399,135",
		rects="1353,125.5,1445,144.5",
		width=1.2778];
	merge -> index_bam	[_draw_="c 7 -#000000 B 4 1399 170.71 1399 165.59 1399 158.85 1399 152.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1401.45 152.78 1399 145.78 1396.55 152.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1408.5 155.6 0 19 3 -bam ",
		label=bam,
		lp="1408.5,157.5",
		pos="e,1399,144.27 1399,170.71 1399,165.59 1399,158.85 1399,152.67"];
	merge -> stringtie	[_draw_="c 7 -#000000 B 7 1413.04 170.54 1421.85 165.32 1433.48 158.58 1444 153 1447.09 151.36 1450.36 149.69 1453.61 148.07 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1454.51 150.35 1459.71 145.07 1452.35 145.96 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1453.5 155.6 0 19 3 -bam ",
		label=bam,
		lp="1453.5,157.5",
		pos="e,1461.1,144.4 1413,170.54 1421.8,165.32 1433.5,158.58 1444,153 1447.1,151.36 1450.4,149.69 1453.6,148.07"];
	kallisto -> transcript_abundance_h5	[_draw_="c 7 -#000000 B 4 1022.74 125.56 1069.55 109.6 1171.07 74.97 1223.38 57.13 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1224.07 59.48 1229.9 54.9 1222.49 54.84 ",
		pos="e,1231.3,54.412 1022.7,125.56 1069.5,109.6 1171.1,74.97 1223.4,57.126"];
	kallisto -> fusion_evidence	[_draw_="c 7 -#000000 B 4 997.04 125.56 995.4 111.14 992.03 81.48 989.9 62.73 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 992.34 62.47 989.11 55.79 987.47 63.02 ",
		pos="e,988.94,54.284 997.04,125.56 995.4,111.14 992.03,81.476 989.9,62.727"];
	kallisto -> transcript_abundance_tsv	[_draw_="c 7 -#000000 B 4 1008.83 125.56 1028.46 110.28 1070.04 77.9 1093.65 59.51 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1095.15 61.45 1099.17 55.21 1092.14 57.58 ",
		pos="e,1100.4,54.284 1008.8,125.56 1028.5,110.28 1070,77.901 1093.7,59.509"];
	kallisto -> transcript_to_gene	[_draw_="c 7 -#000000 B 7 953.91 131.36 938.91 128.99 922.53 124.71 909 117 904.12 114.22 899.74 110.02 896.15 105.8 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 898.33 104.61 892.12 100.56 894.45 107.6 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 948.5 110.6 0 79 19 -transcript_table_h5 ",
		label=transcript_table_h5,
		lp="948.5,112.5",
		pos="e,891.2,99.356 953.91,131.36 938.91,128.99 922.53,124.71 909,117 904.12,114.22 899.74,110.02 896.15,105.8"];
	index_bam -> final_bam	[_draw_="c 7 -#000000 B 4 1395.45 125.56 1389.3 110.94 1376.57 80.66 1368.71 61.96 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1371.04 61.18 1366.07 55.68 1366.52 63.08 ",
		pos="e,1365.5,54.284 1395.5,125.56 1389.3,110.94 1376.6,80.661 1368.7,61.962"];
	index_bam -> generate_qc_metrics	[_draw_="c 7 -#000000 B 10 1444.77 125.71 1446.19 125.47 1447.61 125.23 1449 125 1498.23 116.8 1510.48 114.22 1560 108 1592.02 103.98 1627.48 \
100.35 1657.92 97.49 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1658.11 99.93 1664.86 96.84 1657.66 95.05 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1569.5 110.6 0 19 3 -bam ",
		label=bam,
		lp="1569.5,112.5",
		pos="e,1666.4,96.701 1444.8,125.71 1446.2,125.47 1447.6,125.23 1449,125 1498.2,116.8 1510.5,114.22 1560,108 1592,103.98 1627.5,100.35 \
1657.9,97.487"];
	bam_to_trimmed_fastq_and_hisat_alignments -> merge	[_draw_="c 7 -#000000 B 7 1117.96 224.89 1205 224.31 1314.75 220.67 1358 207 1366.68 204.26 1375.33 199.2 1382.44 194.27 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1383.56 196.49 1387.75 190.37 1380.66 192.54 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1386.5 200.6 0 23 4 -bams ",
		label=bams,
		lp="1386.5,202.5",
		pos="e,1389,189.47 1118,224.89 1205,224.31 1314.7,220.67 1358,207 1366.7,204.26 1375.3,199.2 1382.4,194.27"];
	bam_to_trimmed_fastq_and_hisat_alignments -> kallisto	[_draw_="c 7 -#000000 B 4 998 215.56 998 201.14 998 171.48 998 152.73 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1000.45 152.8 998 145.8 995.55 152.8 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1011 178.1 0 26 6 -fastqs ",
		label=fastqs,
		lp="1011,180",
		pos="e,998,144.28 998,215.56 998,201.14 998,171.48 998,152.73"];
	stringtie -> stringtie_transcript_gtf	[_draw_="c 7 -#000000 B 7 1476.94 125.72 1476.28 122.96 1475.58 119.85 1475 117 1471.26 98.5 1467.76 77.14 1465.52 62.71 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1467.95 62.38 1464.46 55.84 1463.1 63.13 ",
		pos="e,1464.2,54.339 1476.9,125.72 1476.3,122.96 1475.6,119.85 1475,117 1471.3,98.504 1467.8,77.137 1465.5,62.714"];
	stringtie -> stringtie_gene_expression_tsv	[_draw_="c 7 -#000000 B 7 1482.53 125.94 1485.29 120.36 1489.57 113.06 1495 108 1520.19 84.55 1555.93 67.52 1581.66 57.31 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1582.24 59.71 1587.89 54.9 1580.47 55.14 ",
		pos="e,1589.3,54.357 1482.5,125.94 1485.3,120.36 1489.6,113.06 1495,108 1520.2,84.55 1555.9,67.519 1581.7,57.307"];
	transcript_to_gene -> gene_abundance	[_draw_="c 7 -#000000 B 4 886 80.71 886 75.59 886 68.85 886 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 888.45 62.78 886 55.78 883.55 62.78 ",
		pos="e,886,54.265 886,80.709 886,75.593 886,68.848 886,62.666"];
	generate_qc_metrics -> metrics	[_draw_="c 7 -#000000 B 4 1731.84 80.71 1731.13 75.59 1730.19 68.85 1729.33 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1731.76 62.36 1728.36 55.76 1726.9 63.04 ",
		pos="e,1728.2,54.265 1731.8,80.709 1731.1,75.593 1730.2,68.848 1729.3,62.666"];
	generate_qc_metrics -> chart	[_draw_="c 7 -#000000 B 4 1741.68 80.71 1747.78 74.88 1756.09 66.93 1763.23 60.12 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1764.89 61.92 1768.26 55.31 1761.5 58.38 ",
		pos="e,1769.4,54.265 1741.7,80.709 1747.8,74.879 1756.1,66.934 1763.2,60.117"];
}