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	epitope_lengths -> pvacseq	[_draw_="c 7 -#000000 B 13 613.84 403.74 615.91 393.7 619 376.19 619 361 619 361 619 361 619 179 619 116.15 695.48 159.41 758 153 920.5 136.34 \
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 652.5 268.1 0 67 15 -epitope_lengths ",
		label=epitope_lengths,
		lp="652.5,270",
		pos="e,1593.1,135.9 613.84,403.74 615.91,393.7 619,376.19 619,361 619,361 619,361 619,179 619,116.15 695.48,159.41 758,153 920.5,136.34 \
1427.7,135.68 1585,135.89"];
	netmhc_stab -> pvacseq	[_draw_="c 7 -#000000 B 13 1174.93 403.58 1182.4 400.61 1191.01 397.42 1199 395 1232.12 384.96 1351 395.61 1351 361 1351 361 1351 361 1351 \
179 1351 155.64 1504.73 143.31 1584.78 138.48 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1377.5 268.1 0 53 11 -netmhc_stab ",
		label=netmhc_stab,
		lp="1377.5,270",
		pos="e,1593.2,137.98 1174.9,403.58 1182.4,400.61 1191,397.42 1199,395 1232.1,384.96 1351,395.61 1351,361 1351,361 1351,361 1351,179 1351,\
155.64 1504.7,143.31 1584.8,138.48"];
	additional_report_columns -> pvacseq	[_draw_="c 7 -#000000 B 10 1702.53 403.73 1696.61 393.95 1688 376.98 1688 361 1688 361 1688 361 1688 179 1688 165.06 1676.96 155.03 1664.68 \
148.17 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1742.5 268.1 0 109 25 -additional_report_columns ",
		label=additional_report_columns,
		lp="1742.5,270",
		pos="e,1657.4,144.5 1702.5,403.73 1696.6,393.95 1688,376.98 1688,361 1688,361 1688,361 1688,179 1688,165.06 1677,155.03 1664.7,148.17"];
	minimum_fold_change -> pvacseq	[_draw_="c 7 -#000000 B 10 2349.45 403.55 2333.65 395.25 2314 380.92 2314 361 2314 361 2314 361 2314 179 2314 147.13 1833.24 138.46 1679.01 \
136.5 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1679.16 134.06 1672.13 136.42 1679.1 138.96 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2360 268.1 0 92 19 -minimum_fold_change ",
		label=minimum_fold_change,
		lp="2360,270",
		pos="e,1670.6,136.4 2349.5,403.55 2333.6,395.25 2314,380.92 2314,361 2314,361 2314,361 2314,179 2314,147.13 1833.2,138.46 1679,136.5"];
	top_score_metric -> pvacseq	[_draw_="c 7 -#000000 B 10 2468.45 403.55 2452.65 395.25 2433 380.92 2433 361 2433 361 2433 361 2433 179 2433 141.02 1851.13 136.54 1679.25 \
136.05 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1679.42 133.6 1672.42 136.03 1679.41 138.5 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2468 268.1 0 70 16 -top_score_metric ",
		label=top_score_metric,
		lp="2468,270",
		pos="e,1670.9,136.03 2468.5,403.55 2452.6,395.25 2433,380.92 2433,361 2433,361 2433,361 2433,179 2433,141.02 1851.1,136.54 1679.3,136.05"];
	add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3120.5 215.5 3120.5 234.5 3263.5 234.5 3263.5 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3192 222.5 0 127 26 -add expression info to vcf ",
		height=0.27778,
		label="add expression info to vcf",
		pos="3192,225",
		rects="3120.5,215.5,3263.5,234.5",
		width=1.9861];
	expression_tool -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 16 3306.64 403.63 3296.96 395.53 3281.06 383.67 3265 378 3246.48 371.46 3191.74 382.97 3177 370 3166.23 360.53 3170 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3181.82 242.6 3183.91 235.48 3177.84 239.74 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3202 313.1 0 64 15 -expression_tool ",
		label=expression_tool,
		lp="3202,315",
		pos="e,3184.8,234.25 3306.6,403.63 3297,395.53 3281.1,383.67 3265,378 3246.5,371.46 3191.7,382.97 3177,370 3166.2,360.53 3170,352.84 \
3170,338.5 3170,338.5 3170,338.5 3170,269 3170,258.86 3174.9,248.7 3180.1,240.8"];
	add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3352.5 260.5 3352.5 279.5 3495.5 279.5 3495.5 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3424 267.5 0 127 26 -add expression info to vcf ",
		height=0.27778,
		label="add expression info to vcf",
		pos="3424,270",
		rects="3352.5,260.5,3495.5,279.5",
		width=1.9861];
	expression_tool -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 13 3340.58 403.58 3348.94 400.77 3358.35 397.68 3367 395 3447.06 370.17 3497.9 409.2 3548 342 3562.35 322.75 3562.8 \
305.16 3546 288 3539.36 281.21 3522.64 277.09 3503.64 274.6 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3504.12 272.19 3496.88 273.8 3503.55 277.05 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3585 335.6 0 64 15 -expression_tool ",
		label=expression_tool,
		lp="3585,337.5",
		pos="e,3495.4,273.63 3340.6,403.58 3348.9,400.77 3358.4,397.68 3367,395 3447.1,370.17 3497.9,409.2 3548,342 3562.4,322.75 3562.8,305.16 \
3546,288 3539.4,281.21 3522.6,277.09 3503.6,274.6"];
	trna_cov -> pvacseq	[_draw_="c 7 -#000000 B 10 2556.02 403.58 2542.05 394.95 2524 380.09 2524 361 2524 361 2524 361 2524 179 2524 136.31 1863.71 135.25 1679.32 \
135.78 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1679.41 133.33 1672.42 135.81 1679.42 138.23 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2541.5 268.1 0 35 8 -trna_cov ",
		label=trna_cov,
		lp="2541.5,270",
		pos="e,1670.9,135.81 2556,403.58 2542.1,394.95 2524,380.09 2524,361 2524,361 2524,361 2524,179 2524,136.31 1863.7,135.25 1679.3,135.78"];
	exclude_nas -> pvacseq	[_draw_="c 7 -#000000 B 13 362.73 403.5 375.86 394.71 393 379.66 393 361 393 361 393 361 393 179 393 130.49 450.89 159.18 499 153 607.62 \
139.05 1384.51 136.5 1584.93 136.08 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1584.69 138.53 1591.69 136.07 1584.68 133.63 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 418.5 268.1 0 51 11 -exclude_nas ",
		label=exclude_nas,
		lp="418.5,270",
		pos="e,1593.2,136.06 362.73,403.5 375.86,394.71 393,379.66 393,361 393,361 393,361 393,179 393,130.49 450.89,159.18 499,153 607.62,139.05 \
1384.5,136.5 1584.9,136.08"];
	variants_to_table	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3820.5 125.5 3820.5 144.5 3979.5 144.5 3979.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3900 132.5 0 143 29 -SelectVariants (GATK 4.1.8.1) ",
		height=0.27778,
		label="SelectVariants (GATK 4.1.8.1)",
		pos="3900,135",
		rects="3820.5,125.5,3979.5,144.5",
		width=2.2083];
	variants_to_table_genotype_fields -> variants_to_table	[_draw_="c 7 -#000000 B 13 4125.03 403.51 4084.62 396.35 4033.18 387.24 4032 387 3979.76 376.57 3915 414.27 3915 361 3915 361 3915 361 3915 \
179 3915 169.61 3911.77 159.68 3908.31 151.73 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3910.63 150.89 3905.4 145.63 3906.21 153.01 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3948 268.1 0 66 15 -genotype_fields ",
		label=genotype_fields,
		lp="3948,270",
		pos="e,3904.7,144.27 4125,403.51 4084.6,396.35 4033.2,387.24 4032,387 3979.8,376.57 3915,414.27 3915,361 3915,361 3915,361 3915,179 3915,\
169.61 3911.8,159.68 3908.3,151.73"];
	variants_to_table_fields -> variants_to_table	[_draw_="c 7 -#000000 B 13 3974.56 403.5 3946.63 396.74 3912.17 388.2 3911 387 3867.25 342.07 3884 311.21 3884 248.5 3884 248.5 3884 248.5 \
3884 179 3884 169.54 3887.44 159.61 3891.13 151.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3893.24 152.92 3894.25 145.58 3888.88 150.69 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3894.5 268.1 0 23 6 -fields ",
		label=fields,
		lp="3894.5,270",
		pos="e,3894.9,144.23 3974.6,403.5 3946.6,396.74 3912.2,388.2 3911,387 3867.3,342.07 3884,311.21 3884,248.5 3884,248.5 3884,248.5 3884,\
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	tumor_rna_bam_readcount	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 3312 350.5 3312 369.5 3452 369.5 3452 350.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3382 357.5 0 124 22 -bam_readcount workflow ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="bam_readcount workflow",
		pos="3382,360",
		rects="3312,350.5,3452,369.5",
		width=1.9444];
	rnaseq_bam -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 4 3402.04 403.58 3398.61 396.3 3393.57 385.59 3389.4 376.73 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3391.73 375.92 3386.53 370.63 3387.3 378.01 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3403.5 380.6 0 19 3 -bam ",
		label=bam,
		lp="3403.5,382.5",
		pos="e,3385.9,369.26 3402,403.58 3398.6,396.3 3393.6,385.59 3389.4,376.73"];
	readcount_minimum_base_quality -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 4 3514.74 403.58 3487.82 394.94 3445.8 381.47 3416.27 371.99 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3417.15 369.7 3409.74 369.9 3415.65 374.37 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3496.5 380.6 0 71 16 -min_base_quality ",
		label=min_base_quality,
		lp="3496.5,382.5",
		pos="e,3408.3,369.43 3514.7,403.58 3487.8,394.94 3445.8,381.47 3416.3,371.99"];
	normal_cov -> pvacseq	[_draw_="c 7 -#000000 B 10 703.36 403.78 706.03 393.76 710 376.28 710 361 710 361 710 361 710 179 710 134.74 1396.99 134.85 1584.96 135.71 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1584.74 138.16 1591.75 135.74 1584.76 133.26 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 733.5 268.1 0 47 10 -normal_cov ",
		label=normal_cov,
		lp="733.5,270",
		pos="e,1593.3,135.75 703.36,403.78 706.03,393.76 710,376.28 710,361 710,361 710,361 710,179 710,134.74 1397,134.85 1585,135.71"];
	fasta_size -> pvacseq	[_draw_="c 7 -#000000 B 10 777.36 403.78 780.03 393.76 784 376.28 784 361 784 361 784 361 784 179 784 138.59 1406.2 135.86 1584.67 135.91 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1584.57 138.36 1591.57 135.91 1584.57 133.46 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 805 268.1 0 42 10 -fasta_size ",
		label=fasta_size,
		lp="805,270",
		pos="e,1593.1,135.91 777.36,403.78 780.03,393.76 784,376.28 784,361 784,361 784,361 784,179 784,138.59 1406.2,135.86 1584.7,135.91"];
	expn_val -> pvacseq	[_draw_="c 7 -#000000 B 10 850.38 403.64 858.07 394.04 869 377.5 869 361 869 361 869 361 869 179 869 142.96 1418.91 137.12 1585.03 136.18 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1584.61 138.63 1591.6 136.14 1584.59 133.73 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 887 268.1 0 36 8 -expn_val ",
		label=expn_val,
		lp="887,270",
		pos="e,1593.1,136.14 850.38,403.64 858.07,394.04 869,377.5 869,361 869,361 869,361 869,179 869,142.96 1418.9,137.12 1585,136.18"];
	normal_sample_name -> pvacseq	[_draw_="c 7 -#000000 B 10 955.06 403.58 968.48 394.85 986 379.84 986 361 986 361 986 361 986 179 986 148.97 1436.2 139.11 1584.94 136.67 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1031 268.1 0 90 18 -normal_sample_name ",
		label=normal_sample_name,
		lp="1031,270",
		pos="e,1593,136.54 955.06,403.58 968.48,394.85 986,379.84 986,361 986,361 986,361 986,179 986,148.97 1436.2,139.11 1584.9,136.67"];
	net_chop_method -> pvacseq	[_draw_="c 7 -#000000 B 10 1088.29 403.65 1107.85 396.07 1130 382.7 1130 361 1130 361 1130 361 1130 179 1130 156.31 1459.75 142.16 1584.74 \
137.6 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1584.61 140.06 1591.51 137.36 1584.43 135.16 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1166.5 268.1 0 73 15 -net_chop_method ",
		label=net_chop_method,
		lp="1166.5,270",
		pos="e,1593,137.3 1088.3,403.65 1107.8,396.07 1130,382.7 1130,361 1130,361 1130,361 1130,179 1130,156.31 1459.8,142.16 1584.7,137.6"];
	add_vep_fields_to_table	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3821.5 80.5 3821.5 99.5 3978.5 99.5 3978.5 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3900 87.5 0 141 28 -add VEP annotation to report ",
		height=0.27778,
		label="add VEP annotation to report",
		pos="3900,90",
		rects="3821.5,80.5,3978.5,99.5",
		width=2.1806];
	vep_to_table_fields -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 13 4298.47 403.54 4288.38 400.53 4276.73 397.33 4266 395 4215.51 384.05 4036 412.67 4036 361 4036 361 4036 361 4036 \
134 4036 118.47 4003.34 107.83 3970.04 101.03 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3970.86 98.69 3963.52 99.75 3969.92 103.5 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 4057 245.6 0 42 10 -vep_fields ",
		label=vep_fields,
		lp="4057,247.5",
		pos="e,3962,99.461 4298.5,403.54 4288.4,400.53 4276.7,397.33 4266,395 4215.5,384.05 4036,412.67 4036,361 4036,361 4036,361 4036,134 4036,\
118.47 4003.3,107.83 3970,101.03"];
	maximum_transcript_support_level -> pvacseq	[_draw_="c 7 -#000000 B 10 1482 403.7 1482 393.6 1482 376.05 1482 361 1482 361 1482 361 1482 179 1482 157.24 1541.07 145.86 1585.07 140.4 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1585.21 142.85 1591.87 139.59 1584.63 137.98 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1553 268.1 0 142 32 -maximum_transcript_support_level ",
		label=maximum_transcript_support_level,
		lp="1553,270",
		pos="e,1593.4,139.41 1482,403.7 1482,393.6 1482,376.05 1482,361 1482,361 1482,361 1482,179 1482,157.24 1541.1,145.86 1585.1,140.4"];
	gene_expression_file -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 7 3001.91 403.72 3014.78 382.86 3051.78 328.21 3099 305 3120.49 294.44 3254.95 283.02 3344.05 276.47 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3344.21 278.92 3351.02 275.96 3343.86 274.03 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3088.5 335.6 0 61 15 -expression_file ",
		label=expression_file,
		lp="3088.5,337.5",
		pos="e,3352.5,275.85 3001.9,403.72 3014.8,382.86 3051.8,328.21 3099,305 3120.5,294.44 3254.9,283.02 3344.1,276.47"];
	alleles -> pvacseq	[_draw_="c 7 -#000000 B 10 1613.38 403.64 1621.07 394.04 1632 377.5 1632 361 1632 361 1632 361 1632 179 1632 170.31 1632 160.63 1632 152.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1634.45 152.76 1632 145.76 1629.55 152.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1646 268.1 0 28 7 -alleles ",
		label=alleles,
		lp="1646,270",
		pos="e,1632,144.24 1613.4,403.64 1621.1,394.04 1632,377.5 1632,361 1632,361 1632,361 1632,179 1632,170.31 1632,160.63 1632,152.65"];
	reference_fasta -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 7 3871.89 403.64 3863.08 400.47 3852.67 397.11 3843 395 3710.89 366.17 3552.99 360.56 3460.47 360.09 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3460.52 357.64 3453.51 360.07 3460.5 362.54 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3825.5 380.6 0 65 15 -reference_fasta ",
		label=reference_fasta,
		lp="3825.5,382.5",
		pos="e,3452,360.07 3871.9,403.64 3863.1,400.47 3852.7,397.11 3843,395 3710.9,366.17 3553,360.56 3460.5,360.09"];
	reference_fasta -> variants_to_table	[_draw_="c 7 -#000000 B 10 3902.2 403.81 3926.23 381.48 3989 316.64 3989 248.5 3989 248.5 3989 248.5 3989 179 3989 163.66 3978.14 153.79 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3965.18 145.26 3957.77 144.98 3963.39 149.82 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 4008 268.1 0 40 9 -reference ",
		label=reference,
		lp="4008,270",
		pos="e,3956.4,144.43 3902.2,403.81 3926.2,381.48 3989,316.64 3989,248.5 3989,248.5 3989,248.5 3989,179 3989,163.66 3978.1,153.79 3964,\
147.44"];
	prediction_algorithms -> pvacseq	[_draw_="c 7 -#000000 B 10 1841.26 403.77 1835.04 394.02 1826 377.09 1826 361 1826 361 1826 361 1826 179 1826 149 1736.43 139.91 1679.02 \
137.17 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1679.41 134.74 1672.3 136.88 1679.19 139.63 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1870.5 268.1 0 89 21 -prediction_algorithms ",
		label=prediction_algorithms,
		lp="1870.5,270",
		pos="e,1670.8,136.81 1841.3,403.77 1835,394.02 1826,377.09 1826,361 1826,361 1826,361 1826,179 1826,149 1736.4,139.91 1679,137.17"];
	readcount_minimum_mapping_quality -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 7 3692.83 403.55 3650.94 396.22 3588.02 385.61 3533 378 3509.27 374.72 3483.38 371.63 3459.85 369 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3632.5 380.6 0 87 19 -min_mapping_quality ",
		label=min_mapping_quality,
		lp="3632.5,382.5",
		pos="e,3451.6,368.09 3692.8,403.55 3650.9,396.22 3588,385.61 3533,378 3509.3,374.72 3483.4,371.63 3459.8,369"];
	normal_vaf -> pvacseq	[_draw_="c 7 -#000000 B 10 1948.47 403.7 1947.88 393.61 1947 376.06 1947 361 1947 361 1947 361 1947 179 1947 152.33 1767.38 141.42 1679.41 \
137.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1679.55 135.23 1672.45 137.39 1679.35 140.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1970 268.1 0 46 10 -normal_vaf ",
		label=normal_vaf,
		lp="1970,270",
		pos="e,1670.9,137.32 1948.5,403.7 1947.9,393.61 1947,376.06 1947,361 1947,361 1947,361 1947,179 1947,152.33 1767.4,141.42 1679.4,137.67"];
	phased_proximal_variants_vcf -> pvacseq	[_draw_="c 7 -#000000 B 10 2061.69 403.8 2051.36 394.59 2037 378.61 2037 361 2037 361 2037 361 2037 179 2037 143.37 1785.98 137.19 1679.18 \
136.17 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2098 268.1 0 122 28 -phased_proximal_variants_vcf ",
		label=phased_proximal_variants_vcf,
		lp="2098,270",
		pos="e,1670.8,136.1 2061.7,403.8 2051.4,394.59 2037,378.61 2037,361 2037,361 2037,361 2037,179 2037,143.37 1786,137.19 1679.2,136.17"];
	peptide_sequence_length -> pvacseq	[_draw_="c 7 -#000000 B 10 2213.41 403.5 2199.2 394.9 2181 380.15 2181 361 2181 361 2181 361 2181 179 2181 153.92 1811.95 141.06 1679.01 \
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2234 268.1 0 106 23 -peptide_sequence_length ",
		label=peptide_sequence_length,
		lp="2234,270",
		pos="e,1670.6,137 2213.4,403.5 2199.2,394.9 2181,380.15 2181,361 2181,361 2181,361 2181,179 2181,153.92 1812,141.06 1679,137.24"];
	transcript_expression_file -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 10 2866.1 403.56 2870.54 393.62 2877 376.51 2877 361 2877 361 2877 361 2877 269 2877 245.29 3018.89 234.04 3112.21 \
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2907.5 313.1 0 61 15 -expression_file ",
		label=expression_file,
		lp="2907.5,315",
		pos="e,3120.5,228.78 2866.1,403.56 2870.5,393.62 2877,376.51 2877,361 2877,361 2877,361 2877,269 2877,245.29 3018.9,234.04 3112.2,229.2"];
	n_threads -> pvacseq	[_draw_="c 7 -#000000 B 10 2619.46 403.53 2604.18 395.13 2585 380.67 2585 361 2585 361 2585 361 2585 179 2585 133.15 1871.74 134.45 1679.33 \
135.63 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1679.33 133.18 1672.35 135.68 1679.37 138.08 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2605.5 268.1 0 41 9 -n_threads ",
		label=n_threads,
		lp="2605.5,270",
		pos="e,1670.8,135.69 2619.5,403.53 2604.2,395.13 2585,380.67 2585,361 2585,361 2585,361 2585,179 2585,133.15 1871.7,134.45 1679.3,135.63"];
	net_chop_threshold -> pvacseq	[_draw_="c 7 -#000000 B 13 2704.92 403.55 2686.47 395.76 2665 382.14 2665 361 2665 361 2665 361 2665 179 2665 110.9 2581.79 159.45 2514 153 \
2349.8 137.37 1837.51 136.01 1679.13 135.97 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2705.5 268.1 0 81 18 -net_chop_threshold ",
		label=net_chop_threshold,
		lp="2705.5,270",
		pos="e,1671,135.97 2704.9,403.55 2686.5,395.76 2665,382.14 2665,361 2665,361 2665,361 2665,179 2665,110.9 2581.8,159.45 2514,153 2349.8,\
137.37 1837.5,136.01 1679.1,135.97"];
	downstream_sequence_length -> pvacseq	[_draw_="c 7 -#000000 B 13 100.05 403.71 101.24 393.63 103 376.1 103 361 103 361 103 361 103 179 103 109.15 188.43 159.23 258 153 392.16 \
140.99 1358.98 136.94 1584.89 136.15 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1584.72 138.6 1591.71 136.13 1584.71 133.7 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 166 268.1 0 126 26 -downstream_sequence_length ",
		label=downstream_sequence_length,
		lp="166,270",
		pos="e,1593.2,136.12 100.05,403.71 101.24,393.63 103,376.1 103,361 103,361 103,361 103,179 103,109.15 188.43,159.23 258,153 392.16,140.99 \
1359,136.94 1584.9,136.15"];
	tdna_vaf -> pvacseq	[_draw_="c 7 -#000000 B 13 226 403.52 236.58 394.32 251 378.56 251 361 251 361 251 361 251 179 251 152.36 279.07 159.09 305 153 368.42 138.1 \
1355.95 136.26 1584.87 136.03 ",
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		label=tdna_vaf,
		lp="269,270",
		pos="e,1593.3,136.02 226,403.52 236.58,394.32 251,378.56 251,361 251,361 251,361 251,179 251,152.36 279.07,159.09 305,153 368.42,138.1 \
1355.9,136.26 1584.9,136.03"];
	detect_variants_vcf -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 4 3236.73 403.58 3266.45 394.87 3312.96 381.23 3345.32 371.75 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3345.74 374.18 3351.77 369.86 3344.37 369.48 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3326.5 380.6 0 13 3 -vcf ",
		label=vcf,
		lp="3326.5,382.5",
		pos="e,3353.2,369.43 3236.7,403.58 3266.5,394.87 3313,381.23 3345.3,371.75"];
	sample_name -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 7 3102.27 403.53 3098.86 384.86 3092.79 339.14 3107 305 3119.27 275.51 3148.94 252.25 3169.75 238.81 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3136 313.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="3136,315",
		pos="e,3177,234.31 3102.3,403.53 3098.9,384.86 3092.8,339.14 3107,305 3119.3,275.51 3148.9,252.25 3169.8,238.81"];
	sample_name -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 19 3126.4 403.65 3134.16 400.83 3142.94 397.7 3151 395 3175.26 386.87 3181.42 385.1 3206 378 3251.99 364.71 3262.71 \
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283.04 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3513 335.6 0 58 11 -sample_name ",
		label=sample_name,
		lp="3513,337.5",
		pos="e,3450.1,279.44 3126.4,403.65 3134.2,400.83 3142.9,397.7 3151,395 3175.3,386.87 3181.4,385.1 3206,378 3252,364.71 3262.7,357.42 \
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	sample_name -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 10 3124.32 403.66 3132.5 400.57 3142.09 397.27 3151 395 3152.52 394.61 3261.44 378.23 3263 378 3279.5 375.57 3297.3 \
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3278.5 380.6 0 31 6 -sample ",
		label=sample,
		lp="3278.5,382.5",
		pos="e,3322.1,369.46 3124.3,403.66 3132.5,400.57 3142.1,397.27 3151,395 3152.5,394.61 3261.4,378.23 3263,378 3279.5,375.57 3297.3,373 \
3314,370.61"];
	sample_name -> pvacseq	[_draw_="c 7 -#000000 B 13 3101.65 403.55 3098.3 391.59 3091.9 369.06 3086 350 3072.1 305.06 3056 295.54 3056 248.5 3056 248.5 3056 248.5 \
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3088 268.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="3088,270",
		pos="e,1670.8,136.13 3101.6,403.55 3098.3,391.59 3091.9,369.06 3086,350 3072.1,305.06 3056,295.54 3056,248.5 3056,248.5 3056,248.5 3056,\
179 3056,143.75 1926,137.18 1679.2,136.17"];
	add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 3238 305.5 3238 324.5 3482 324.5 3482 305.5 ",
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		fillcolor="#F3CEA1",
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		pos="3360,315",
		rects="3238,305.5,3482,324.5",
		width=3.3889];
	sample_name -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 10 3096.25 403.64 3090.87 396.78 3085.27 386.79 3089 378 3096 361.51 3102.16 358.37 3118 350 3139.36 338.71 3189.63 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3238.84 327.83 3245.54 324.65 3238.32 322.95 ",
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		label=sample_name,
		lp="3147,360",
		pos="e,3247,324.49 3096.3,403.64 3090.9,396.78 3085.3,386.79 3089,378 3096,361.51 3102.2,358.37 3118,350 3139.4,338.71 3189.6,330.74 \
3238.8,325.36"];
	trna_vaf -> pvacseq	[_draw_="c 7 -#000000 B 13 284.1 403.59 291.49 393.95 302 377.37 302 361 302 361 302 361 302 179 302 135.65 353.09 159.13 396 153 515.05 \
136 1373.15 135.74 1584.87 135.93 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 319 268.1 0 34 8 -trna_vaf ",
		label=trna_vaf,
		lp="319,270",
		pos="e,1593.3,135.94 284.1,403.59 291.49,393.95 302,377.37 302,361 302,361 302,361 302,179 302,135.65 353.09,159.13 396,153 515.05,136 \
1373.2,135.74 1584.9,135.93"];
	add_vep_fields_to_table -> annotated_tsv	[_draw_="c 7 -#000000 B 4 3821.78 83.2 3701.03 74.25 3472.56 57.31 3370.94 49.78 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3371.35 47.35 3364.19 49.28 3370.99 52.24 ",
		pos="e,3362.7,49.164 3821.8,83.201 3701,74.248 3472.6,57.31 3370.9,49.777"];
	add_transcript_expression_data_to_vcf -> annotated_vcf	[_draw_="c 7 -#000000 B 10 3206.15 215.67 3216.95 208.14 3230 195.94 3230 181 3230 181 3230 181 3230 89 3230 80.31 3230 70.63 3230 62.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3232.45 62.76 3230 55.76 3227.55 62.76 ",
		pos="e,3230,54.243 3206.1,215.67 3217,208.14 3230,195.94 3230,181 3230,181 3230,181 3230,89 3230,80.308 3230,70.627 3230,62.655"];
	index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3161 170.5 3161 189.5 3223 189.5 3223 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3192 177.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="3192,180",
		rects="3161,170.5,3223,189.5",
		width=0.86111];
	add_transcript_expression_data_to_vcf -> index	[_draw_="c 7 -#000000 B 4 3192 215.71 3192 210.59 3192 203.85 3192 197.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3194.45 197.78 3192 190.78 3189.55 197.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3198.5 200.6 0 13 3 -vcf ",
		label=vcf,
		lp="3198.5,202.5",
		pos="e,3192,189.27 3192,215.71 3192,210.59 3192,203.85 3192,197.67"];
	index -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 7 3222.87 170.82 3224.26 170.53 3225.64 170.25 3227 170 3435.65 131.11 3684.46 107.8 3813.2 97.42 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3813.22 99.88 3820 96.88 3812.83 95 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3529.5 133.1 0 13 3 -vcf ",
		label=vcf,
		lp="3529.5,135",
		pos="e,3821.5,96.759 3222.9,170.82 3224.3,170.53 3225.6,170.25 3227,170 3435.7,131.11 3684.5,107.8 3813.2,97.423"];
	index -> pvacseq	[_draw_="c 7 -#000000 B 7 3161.04 171.24 3134.44 164.97 3094.97 156.62 3060 153 2920.38 138.54 1910.4 136.36 1679.1 136.05 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1679.4 133.6 1672.4 136.04 1679.4 138.5 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3132.5 155.6 0 37 9 -input_vcf ",
		label=input_vcf,
		lp="3132.5,157.5",
		pos="e,1670.9,136.04 3161,171.24 3134.4,164.97 3095,156.62 3060,153 2920.4,138.54 1910.4,136.36 1679.1,136.05"];
	index -> variants_to_table	[_draw_="c 7 -#000000 B 4 3222.88 177.12 3324.85 170.93 3653.39 150.98 3812.3 141.33 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3812.32 143.78 3819.15 140.91 3812.02 138.89 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3615.5 155.6 0 13 3 -vcf ",
		label=vcf,
		lp="3615.5,157.5",
		pos="e,3820.7,140.82 3222.9,177.12 3324.9,170.93 3653.4,150.98 3812.3,141.33"];
	add_gene_expression_data_to_vcf -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 4 3378.16 260.5 3340.19 253.47 3286.15 243.45 3246.07 236.02 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3334.5 245.6 0 13 3 -vcf ",
		label=vcf,
		lp="3334.5,247.5",
		pos="e,3237.7,234.48 3378.2,260.5 3340.2,253.47 3286.2,243.45 3246.1,236.02"];
	tumor_rna_bam_readcount -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 10 3312.33 358.07 3285.61 356.11 3259.48 351.65 3251 342 3248.36 339 3248.4 336.04 3251 333 3252.86 330.83 3255.77 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3260.27 329.59 3266.01 324.89 3258.6 324.98 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3257.5 335.6 0 13 3 -vcf ",
		label=vcf,
		lp="3257.5,337.5",
		pos="e,3267.4,324.38 3312.3,358.07 3285.6,356.11 3259.5,351.65 3251,342 3248.4,339 3248.4,336.04 3251,333 3252.9,330.83 3255.8,328.93 \
3259.5,327.28"];
	tumor_rna_bam_readcount -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 3312.17 355.25 3294.42 352.77 3278.73 348.69 3273 342 3268.81 337.11 3268.18 333.12 3270.06 329.86 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3325 335.6 0 104 23 -indel_bam_readcount_tsv ",
		label=indel_bam_readcount_tsv,
		lp="3325,337.5",
		pos="e,3276.5,324.47 3312.2,355.25 3294.4,352.77 3278.7,348.69 3273,342 3268.8,337.11 3268.2,333.12 3270.1,329.86"];
	tumor_rna_bam_readcount -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 3380.38 350.95 3379.11 345.64 3377.04 338.66 3374 333 3373.64 332.32 3373.24 331.65 3372.83 330.98 ",
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		label=snv_bam_readcount_tsv,
		lp="3426,337.5",
		pos="e,3367.8,324.18 3380.4,350.95 3379.1,345.64 3377,338.66 3374,333 3373.6,332.32 3373.2,331.65 3372.8,330.98"];
	pvacseq -> pvacseq_predictions	[_draw_="c 7 -#000000 B 4 1670.79 131.71 1872.52 119.82 2802.4 65.01 3059.16 49.88 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3058.93 52.35 3065.78 49.49 3058.64 47.46 ",
		pos="e,3067.3,49.402 1670.8,131.71 1872.5,119.82 2802.4,65.015 3059.2,49.881"];
	add_tumor_rna_bam_readcount_to_vcf -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 4 3372.64 305.5 3381.76 299.38 3394.23 291 3404.61 284.03 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3403.5 290.6 0 13 3 -vcf ",
		label=vcf,
		lp="3403.5,292.5",
		pos="e,3411.4,279.48 3372.6,305.5 3381.8,299.38 3394.2,291 3404.6,284.03"];
	variants_to_table -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 4 3900 125.71 3900 120.59 3900 113.85 3900 107.67 ",
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		label=tsv,
		lp="3906.5,112.5",
		pos="e,3900,99.265 3900,125.71 3900,120.59 3900,113.85 3900,107.67"];
	default1	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 4043 125.5 4043 144.5 4109 144.5 4109 125.5 ",
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		fillcolor="#D5AEFC",
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		label="\"pvacseq\"",
		pos="4076,135",
		rects="4043,125.5,4109,144.5",
		width=0.91667];
	default1 -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 7 4067.29 125.75 4060.44 119.77 4050.34 112.05 4040 108 4023.29 101.46 4004.68 97.27 3986.62 94.62 ",
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		label=prefix,
		lp="4067,112.5",
		pos="e,3978.4,93.511 4067.3,125.75 4060.4,119.77 4050.3,112.05 4040,108 4023.3,101.46 4004.7,97.27 3986.6,94.622"];
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		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3213 267.5 0 56 12 -\"transcript\" ",
		fillcolor="#D5AEFC",
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		label="\"transcript\"",
		pos="3213,270",
		rects="3177,260.5,3249,279.5",
		width=1];
	default2 -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 4 3208.95 260.71 3206.34 255.36 3202.85 248.22 3199.72 241.81 ",
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		label=data_type,
		lp="3224.5,247.5",
		pos="e,3196,234.27 3209,260.71 3206.3,255.36 3202.9,248.22 3199.7,241.81"];
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		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3521 312.5 0 34 6 -\"gene\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"gene\"",
		pos="3521,315",
		rects="3496,305.5,3546,324.5",
		width=0.69444];
	default3 -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 7 3514 305.54 3508.78 299.77 3501.17 292.41 3493 288 3488.83 285.75 3484.35 283.79 3479.76 282.08 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3480.8 279.85 3473.38 279.94 3479.24 284.49 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3524.5 290.6 0 41 9 -data_type ",
		label=data_type,
		lp="3524.5,292.5",
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		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3201 357.5 0 31 5 -\"RNA\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"RNA\"",
		pos="3201,360",
		rects="3177.5,350.5,3224.5,369.5",
		width=0.65278];
	default4 -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 3200.59 350.73 3200.78 344.89 3202.09 337.37 3207 333 3210.19 330.16 3221.31 327.68 3236.2 325.56 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3236.2 328.03 3242.81 324.68 3235.55 323.17 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3227.5 335.6 0 41 9 -data_type ",
		label=data_type,
		lp="3227.5,337.5",
		pos="e,3244.3,324.48 3200.6,350.73 3200.8,344.89 3202.1,337.37 3207,333 3210.2,330.16 3221.3,327.68 3236.2,325.56"];
}