digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 323 408 323 408 0 ",
		bb="0,0,408,323",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
	];
	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 260 8 315 400 315 400 260 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 303 0 84 15 -Workflow Inputs ",
			bb="8,260,400,315",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,305.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		tumor_cram	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 152 268.5 152 287.5 228 287.5 228 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 190 275.5 0 60 10 -tumor_cram ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=tumor_cram,
			pos="190,278",
			rects="152,268.5,228,287.5",
			width=1.0556];
		docm_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16 268.5 16 287.5 80 287.5 80 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 48 275.5 0 48 8 -docm_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=docm_vcf,
			pos="48,278",
			rects="16,268.5,80,287.5",
			width=0.88889];
		interval_list	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 232 268.5 232 287.5 306 287.5 306 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 269 275.5 0 58 13 -interval_list ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=interval_list,
			pos="269,278",
			rects="232,268.5,306,287.5",
			width=1.0278];
		normal_cram	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 310.5 268.5 310.5 287.5 391.5 287.5 391.5 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 351 275.5 0 65 11 -normal_cram ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=normal_cram,
			pos="351,278",
			rects="310.5,268.5,391.5,287.5",
			width=1.125];
		reference	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 84.5 268.5 84.5 287.5 147.5 287.5 147.5 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 116 275.5 0 47 9 -reference ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=reference,
			pos="116,278",
			rects="84.5,268.5,147.5,287.5",
			width=0.875];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 90 8 90 63 265 63 265 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 144 15 0 92 16 -Workflow Outputs ",
			bb="90,8,265,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="144,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		unfiltered_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 98.5 35.5 98.5 54.5 181.5 54.5 181.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 140 42.5 0 67 14 -unfiltered_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=unfiltered_vcf,
			pos="140,45",
			rects="98.5,35.5,181.5,54.5",
			width=1.1528];
		filtered_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 185.5 35.5 185.5 54.5 256.5 54.5 256.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 221 42.5 0 55 12 -filtered_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=filtered_vcf,
			pos="221,45",
			rects="185.5,35.5,256.5,54.5",
			width=0.98611];
	}
	GATK_haplotype_caller	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 64 215.5 64 234.5 214 234.5 214 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 139 222.5 0 134 26 -HaplotypeCaller (GATK 3.6) ",
		height=0.27778,
		label="HaplotypeCaller (GATK 3.6)",
		pos="139,225",
		rects="64,215.5,214,234.5",
		width=2.0833];
	tumor_cram -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 186.61 268.61 183.27 261.16 177.57 250.34 170 243 168.5 241.54 166.84 240.17 165.11 238.89 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 166.62 236.95 159.41 235.21 163.96 241.07 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 186.5 245.6 0 21 4 -cram ",
		label=cram,
		lp="186.5,247.5",
		pos="e,158.14,234.39 186.61,268.61 183.27,261.16 177.57,250.34 170,243 168.5,241.54 166.84,240.17 165.11,238.89"];
	docm_filter	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 187.5 170.5 187.5 189.5 256.5 189.5 256.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 222 177.5 0 53 11 -docm filter ",
		height=0.27778,
		label="docm filter",
		pos="222,180",
		rects="187.5,170.5,256.5,189.5",
		width=0.95833];
	tumor_cram -> docm_filter	[_draw_="c 7 -#000000 B 7 195.95 268.76 201.54 260.6 209.66 247.54 214 235 218.21 222.82 220.21 208.35 221.15 197.46 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 223.57 197.94 221.62 190.78 218.69 197.6 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 242.5 223.1 0 49 10 -tumor_cram ",
		label=tumor_cram,
		lp="242.5,225",
		pos="e,221.72,189.28 195.95,268.76 201.54,260.6 209.66,247.54 214,235 218.21,222.82 220.21,208.35 221.15,197.46"];
	docm_vcf -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 55.63 268.66 63 261.03 74.82 249.92 87 243 90.62 240.94 94.53 239.09 98.52 237.43 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 99.16 239.81 104.83 235.03 97.41 235.23 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 106.5 245.6 0 39 8 -docm_vcf ",
		label=docm_vcf,
		lp="106.5,247.5",
		pos="e,106.24,234.49 55.626,268.66 62.998,261.03 74.815,249.92 87,243 90.624,240.94 94.533,239.09 98.523,237.43"];
	interval_list -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 253.26 268.53 239.09 261.13 217.54 250.44 198 243 192.31 240.84 186.23 238.79 180.21 236.92 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 180.95 234.59 173.54 234.92 179.54 239.28 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 240.5 245.6 0 47 13 -interval_list ",
		label=interval_list,
		lp="240.5,247.5",
		pos="e,172.09,234.49 253.26,268.53 239.09,261.13 217.54,250.44 198,243 192.31,240.84 186.23,238.79 180.21,236.92"];
	normal_cram -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 7 333.31 268.53 316.21 260.71 289.39 249.37 265 243 256.11 240.68 239.68 238.07 221.55 235.61 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 221.88 233.18 214.62 234.69 221.24 238.04 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 317.5 245.6 0 53 11 -normal_cram ",
		label=normal_cram,
		lp="317.5,247.5",
		pos="e,213.12,234.49 333.31,268.53 316.21,260.71 289.39,249.37 265,243 256.11,240.68 239.68,238.07 221.55,235.61"];
	normal_cram -> docm_filter	[_draw_="c 7 -#000000 B 7 351.23 268.62 351.02 261.18 349.63 250.38 344 243 324.26 217.13 290.71 201.19 263.79 191.97 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 264.88 189.75 257.47 189.9 263.36 194.4 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 362.5 223.1 0 53 11 -normal_cram ",
		label=normal_cram,
		lp="362.5,225",
		pos="e,256.03,189.43 351.23,268.62 351.02,261.18 349.63,250.38 344,243 324.26,217.13 290.71,201.19 263.79,191.97"];
	reference -> GATK_haplotype_caller	[_draw_="c 7 -#000000 B 4 119.8 268.58 123.05 261.37 127.81 250.81 131.78 242 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 134.01 243.03 134.65 235.64 129.54 241.02 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 150 245.6 0 40 9 -reference ",
		label=reference,
		lp="150,247.5",
		pos="e,135.27,234.26 119.8,268.58 123.05,261.37 127.81,250.81 131.78,242"];
	GATK_haplotype_caller -> unfiltered_vcf	[_draw_="c 7 -#000000 B 10 139.31 215.76 139.6 207.1 140 193.1 140 181 140 181 140 181 140 89 140 80.31 140 70.63 140 62.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 142.45 62.76 140 55.76 137.55 62.76 ",
		pos="e,140,54.243 139.31,215.76 139.6,207.1 140,193.1 140,181 140,181 140,181 140,89 140,80.308 140,70.627 140,62.655"];
	GATK_haplotype_caller -> docm_filter	[_draw_="c 7 -#000000 B 7 150.2 215.58 157.78 210.11 168.18 203.09 178 198 181.72 196.07 185.71 194.23 189.72 192.53 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 190.41 194.89 195.97 189.99 188.56 190.35 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 198 200.6 0 40 8 -docm_out ",
		label=docm_out,
		lp="198,202.5",
		pos="e,197.37,189.42 150.2,215.58 157.78,210.11 168.18,203.09 178,198 181.72,196.07 185.71,194.23 189.72,192.53"];
	bgzip	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 189.5 125.5 189.5 144.5 254.5 144.5 254.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 222 132.5 0 49 9 -bgzip VCF ",
		height=0.27778,
		label="bgzip VCF",
		pos="222,135",
		rects="189.5,125.5,254.5,144.5",
		width=0.90278];
	docm_filter -> bgzip	[_draw_="c 7 -#000000 B 4 222 170.71 222 165.59 222 158.85 222 152.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 224.45 152.78 222 145.78 219.55 152.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 228.5 155.6 0 13 4 -file ",
		label=file,
		lp="228.5,157.5",
		pos="e,222,144.27 222,170.71 222,165.59 222,158.85 222,152.67"];
	index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 191 80.5 191 99.5 253 99.5 253 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 222 87.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="222,90",
		rects="191,80.5,253,99.5",
		width=0.86111];
	index -> filtered_vcf	[_draw_="c 7 -#000000 B 4 221.81 80.71 221.69 75.59 221.53 68.85 221.39 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 223.84 62.72 221.23 55.78 218.94 62.83 ",
		pos="e,221.19,54.265 221.81,80.709 221.69,75.593 221.53,68.848 221.39,62.666"];
	bgzip -> index	[_draw_="c 7 -#000000 B 4 222 125.71 222 120.59 222 113.85 222 107.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 224.45 107.78 222 100.78 219.55 107.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 228.5 110.6 0 13 3 -vcf ",
		label=vcf,
		lp="228.5,112.5",
		pos="e,222,99.265 222,125.71 222,120.59 222,113.85 222,107.67"];
}