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			height=0.27778,
			label=gene_expression_file,
			pos="3094,376",
			rects="3034.5,366.5,3153.5,385.5",
			width=1.6528];
		normal_vaf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 2106 366.5 2106 385.5 2178 385.5 2178 366.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2142 373.5 0 56 10 -normal_vaf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=normal_vaf,
			pos="2142,376",
			rects="2106,366.5,2178,385.5",
			width=1];
		transcript_expression_file	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 2790 366.5 2790 385.5 2932 385.5 2932 366.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2861 373.5 0 126 26 -transcript_expression_file ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=transcript_expression_file,
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			rects="2790,366.5,2932,385.5",
			width=1.9722];
		binding_threshold	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 245 366.5 245 385.5 349 385.5 349 366.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 297 373.5 0 88 17 -binding_threshold ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=binding_threshold,
			pos="297,376",
			rects="245,366.5,349,385.5",
			width=1.4444];
		vep_to_table_fields	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 4267.5 366.5 4267.5 385.5 4378.5 385.5 4378.5 366.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 4323 373.5 0 95 19 -vep_to_table_fields ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=vep_to_table_fields,
			pos="4323,376",
			rects="4267.5,366.5,4378.5,385.5",
			width=1.5417];
		expn_val	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 2376.5 366.5 2376.5 385.5 2437.5 385.5 2437.5 366.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2407 373.5 0 45 8 -expn_val ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=expn_val,
			pos="2407,376",
			rects="2376.5,366.5,2437.5,385.5",
			width=0.84722];
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	tumor_rna_bam_readcount	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 3414 313.5 3414 332.5 3554 332.5 3554 313.5 ",
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		fillcolor="#F3CEA1",
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		label="bam_readcount workflow",
		pos="3484,323",
		rects="3414,313.5,3554,332.5",
		width=1.9444];
	rnaseq_bam -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 7 3783.92 366.6 3776.63 363.49 3768.04 360.2 3760 358 3694.78 340.16 3618.31 331.67 3562.42 327.63 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3732.5 343.6 0 19 3 -bam ",
		label=bam,
		lp="3732.5,345.5",
		pos="e,3554,327.04 3783.9,366.6 3776.6,363.49 3768,360.2 3760,358 3694.8,340.16 3618.3,331.67 3562.4,327.63"];
	readcount_minimum_base_quality -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 4 3636.78 366.58 3605.39 357.83 3556.19 344.12 3522.14 334.63 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3523.12 332.36 3515.72 332.84 3521.81 337.08 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3610.5 343.6 0 71 16 -min_base_quality ",
		label=min_base_quality,
		lp="3610.5,345.5",
		pos="e,3514.3,332.43 3636.8,366.58 3605.4,357.83 3556.2,344.12 3522.1,334.63"];
	add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3074.5 223.5 3074.5 242.5 3217.5 242.5 3217.5 223.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3146 230.5 0 127 26 -add expression info to vcf ",
		height=0.27778,
		label="add expression info to vcf",
		pos="3146,233",
		rects="3074.5,223.5,3217.5,242.5",
		width=1.9861];
	expression_tool -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 10 2988.34 366.53 2999.41 349.81 3026.61 312.72 3060 296 3084.45 283.76 3098.97 304.19 3121 288 3122.7 286.75 3132.43 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3141.3 250.94 3141.86 243.55 3136.81 248.98 ",
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		label=expression_tool,
		lp="3092,300.5",
		pos="e,3142.5,242.16 2988.3,366.53 2999.4,349.81 3026.6,312.72 3060,296 3084.4,283.76 3099,304.19 3121,288 3122.7,286.75 3132.4,265.07 \
3139.2,249.57"];
	add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2946.5 178.5 2946.5 197.5 3089.5 197.5 3089.5 178.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3018 185.5 0 127 26 -add expression info to vcf ",
		height=0.27778,
		label="add expression info to vcf",
		pos="3018,188",
		rects="2946.5,178.5,3089.5,197.5",
		width=1.9861];
	expression_tool -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 13 2974.38 366.63 2955.6 347.38 2914.61 299.22 2940 268 2974.37 225.73 3025.63 285.27 3060 243 3070.37 230.24 3069.19 \
219.64 3060 206 3059.18 204.79 3058.27 203.66 3057.26 202.62 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3058.95 200.83 3051.93 198.41 3055.91 204.67 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2972 276.1 0 64 15 -expression_tool ",
		label=expression_tool,
		lp="2972,278",
		pos="e,3050.7,197.47 2974.4,366.63 2955.6,347.38 2914.6,299.22 2940,268 2974.4,225.73 3025.6,285.27 3060,243 3070.4,230.24 3069.2,219.64 \
3060,206 3059.2,204.79 3058.3,203.66 3057.3,202.62"];
	pvacseq	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1335 88.5 1335 107.5 1413 107.5 1413 88.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1374 95.5 0 62 11 -run pVACseq ",
		height=0.27778,
		label="run pVACseq",
		pos="1374,98",
		rects="1335,88.5,1413,107.5",
		width=1.0833];
	netmhc_stab -> pvacseq	[_draw_="c 7 -#000000 B 10 1270.97 366.53 1282.98 357.55 1299 342.18 1299 324 1299 324 1299 324 1299 142 1299 125.88 1312.21 115.71 1327.53 \
109.35 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1328.05 111.77 1333.76 107.04 1326.35 107.17 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1325.5 231.1 0 53 11 -netmhc_stab ",
		label=netmhc_stab,
		lp="1325.5,233",
		pos="e,1335.2,106.52 1271,366.53 1283,357.55 1299,342.18 1299,324 1299,324 1299,324 1299,142 1299,125.88 1312.2,115.71 1327.5,109.35"];
	fasta_size -> pvacseq	[_draw_="c 7 -#000000 B 10 938.94 366.61 968.45 352.75 1024 326.34 1024 324 1024 324 1024 324 1024 142 1024 111.84 1231.37 102.63 1326.87 \
99.99 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1326.76 102.45 1333.69 99.81 1326.63 97.55 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1045 231.1 0 42 10 -fasta_size ",
		label=fasta_size,
		lp="1045,233",
		pos="e,1335.2,99.771 938.94,366.61 968.45,352.75 1024,326.34 1024,324 1024,324 1024,324 1024,142 1024,111.84 1231.4,102.63 1326.9,99.993"];
	prediction_algorithms -> pvacseq	[_draw_="c 7 -#000000 B 10 1039.55 366.55 1055.35 358.25 1075 343.92 1075 324 1075 324 1075 324 1075 142 1075 116.87 1242.61 105.27 1326.84 \
101.02 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1326.83 103.47 1333.71 100.68 1326.59 98.58 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1119.5 231.1 0 89 21 -prediction_algorithms ",
		label=prediction_algorithms,
		lp="1119.5,233",
		pos="e,1335.2,100.61 1039.5,366.55 1055.4,358.25 1075,343.92 1075,324 1075,324 1075,324 1075,142 1075,116.87 1242.6,105.27 1326.8,101.02"];
	trna_cov -> pvacseq	[_draw_="c 7 -#000000 B 10 1128.22 366.59 1145.06 355.41 1172 335.69 1172 324 1172 324 1172 324 1172 142 1172 110.5 1267.19 101.98 1326.88 \
99.74 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1326.63 102.2 1333.54 99.51 1326.46 97.3 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1189.5 231.1 0 35 8 -trna_cov ",
		label=trna_cov,
		lp="1189.5,233",
		pos="e,1335.1,99.463 1128.2,366.59 1145.1,355.41 1172,335.69 1172,324 1172,324 1172,324 1172,142 1172,110.5 1267.2,101.98 1326.9,99.739"];
	reference_fasta -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 7 3868.57 366.54 3860.03 363.54 3850.15 360.33 3841 358 3747.04 334.03 3635.27 326.64 3562.14 324.53 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3562.43 322.09 3555.37 324.35 3562.3 326.99 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3835.5 343.6 0 65 15 -reference_fasta ",
		label=reference_fasta,
		lp="3835.5,345.5",
		pos="e,3553.9,324.31 3868.6,366.54 3860,363.54 3850.2,360.33 3841,358 3747,334.03 3635.3,326.64 3562.1,324.53"];
	variants_to_table	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3820.5 88.5 3820.5 107.5 3961.5 107.5 3961.5 88.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3891 95.5 0 125 25 -SelectVariants (GATK 3.6) ",
		height=0.27778,
		label="SelectVariants (GATK 3.6)",
		pos="3891,98",
		rects="3820.5,88.5,3961.5,107.5",
		width=1.9583];
	reference_fasta -> variants_to_table	[_draw_="c 7 -#000000 B 10 3891 366.7 3891 356.6 3891 339.05 3891 324 3891 324 3891 324 3891 142 3891 133.31 3891 123.63 3891 115.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3893.45 115.76 3891 108.76 3888.55 115.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3911 231.1 0 40 9 -reference ",
		label=reference,
		lp="3911,233",
		pos="e,3891,107.24 3891,366.7 3891,356.6 3891,339.05 3891,324 3891,324 3891,324 3891,142 3891,133.31 3891,123.63 3891,115.65"];
	minimum_fold_change -> pvacseq	[_draw_="c 7 -#000000 B 10 2035.9 366.76 2033.53 356.73 2030 339.24 2030 324 2030 324 2030 324 2030 142 2030 111.44 1570.73 101.92 1420.76 \
99.62 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1421.14 97.18 1414.1 99.52 1421.06 102.08 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2076 231.1 0 92 19 -minimum_fold_change ",
		label=minimum_fold_change,
		lp="2076,233",
		pos="e,1412.6,99.498 2035.9,366.76 2033.5,356.73 2030,339.24 2030,324 2030,324 2030,324 2030,142 2030,111.44 1570.7,101.92 1420.8,99.621"];
	maximum_transcript_support_level -> pvacseq	[_draw_="c 7 -#000000 B 10 2248.12 366.53 2228.84 358.9 2207 345.5 2207 324 2207 324 2207 324 2207 142 2207 102.35 1597.18 99.07 1421.08 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1421.3 96.5 1414.3 98.95 1421.3 101.4 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2278 231.1 0 142 32 -maximum_transcript_support_level ",
		label=maximum_transcript_support_level,
		lp="2278,233",
		pos="e,1412.8,98.947 2248.1,366.53 2228.8,358.9 2207,345.5 2207,324 2207,324 2207,324 2207,142 2207,102.35 1597.2,99.071 1421.1,98.951"];
	alleles -> pvacseq	[_draw_="c 7 -#000000 B 13 2458.9 366.59 2451.51 356.95 2441 340.37 2441 324 2441 324 2441 324 2441 142 2441 130.68 2410.82 127 2255 116 \
2090.65 104.39 1579.17 100.28 1421.06 99.27 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1421.44 96.82 1414.43 99.23 1421.41 101.72 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2455 231.1 0 28 7 -alleles ",
		label=alleles,
		lp="2455,233",
		pos="e,1412.9,99.22 2458.9,366.59 2451.5,356.95 2441,340.37 2441,324 2441,324 2441,324 2441,142 2441,130.68 2410.8,127 2255,116 2090.7,\
104.39 1579.2,100.28 1421.1,99.272"];
	readcount_minimum_mapping_quality -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 7 3363.41 366.64 3376.8 357.75 3397.36 344.49 3406 341 3412.19 338.5 3418.81 336.34 3425.48 334.48 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3425.69 336.95 3431.84 332.81 3424.45 332.21 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3449.5 343.6 0 87 19 -min_mapping_quality ",
		label=min_mapping_quality,
		lp="3449.5,345.5",
		pos="e,3433.3,332.43 3363.4,366.64 3376.8,357.75 3397.4,344.49 3406,341 3412.2,338.5 3418.8,336.34 3425.5,334.48"];
	tdna_vaf -> pvacseq	[_draw_="c 7 -#000000 B 16 397.81 366.55 403.4 363.59 409.88 360.4 416 358 468.4 337.45 538 380.29 538 324 538 324 538 324 538 142 538 97.37 \
590.82 122.34 635 116 769.23 96.75 1185.43 97.7 1326.6 98.61 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1326.57 101.06 1333.59 98.66 1326.61 96.16 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 556 231.1 0 36 8 -tdna_vaf ",
		label=tdna_vaf,
		lp="556,233",
		pos="e,1335.1,98.671 397.81,366.55 403.4,363.59 409.88,360.4 416,358 468.4,337.45 538,380.29 538,324 538,324 538,324 538,142 538,97.367 \
590.82,122.34 635,116 769.23,96.75 1185.4,97.697 1326.6,98.614"];
	trna_vaf -> pvacseq	[_draw_="c 7 -#000000 B 16 458.22 366.57 463.81 363.39 470.52 360.04 477 358 510.22 347.53 630 358.83 630 324 630 324 630 324 630 142 630 \
110.06 665.68 122.27 697 116 758.18 103.75 1183.37 100.13 1326.84 99.25 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1326.58 101.7 1333.56 99.21 1326.55 96.8 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 647 231.1 0 34 8 -trna_vaf ",
		label=trna_vaf,
		lp="647,233",
		pos="e,1335.1,99.197 458.22,366.57 463.81,363.39 470.52,360.04 477,358 510.22,347.53 630,358.83 630,324 630,324 630,324 630,142 630,110.06 \
665.68,122.27 697,116 758.18,103.75 1183.4,100.13 1326.8,99.246"];
	peptide_sequence_length -> pvacseq	[_draw_="c 7 -#000000 B 13 582.7 366.58 626.44 355.47 696 335.92 696 324 696 324 696 324 696 142 696 83.08 767.46 122.71 826 116 922.41 104.94 \
1212.88 100.71 1327.12 99.45 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1326.87 101.9 1333.85 99.38 1326.82 97 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 749 231.1 0 106 23 -peptide_sequence_length ",
		label=peptide_sequence_length,
		lp="749,233",
		pos="e,1335.4,99.362 582.7,366.58 626.44,355.47 696,335.92 696,324 696,324 696,324 696,142 696,83.078 767.46,122.71 826,116 922.41,104.94 \
1212.9,100.71 1327.1,99.452"];
	exclude_nas -> pvacseq	[_draw_="c 7 -#000000 B 16 680.98 366.64 688.18 363.75 696.4 360.59 704 358 755.66 340.39 822 378.58 822 324 822 324 822 324 822 142 822 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1326.69 101.7 1333.67 99.2 1326.65 96.8 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 847.5 231.1 0 51 11 -exclude_nas ",
		label=exclude_nas,
		lp="847.5,233",
		pos="e,1335.2,99.192 680.98,366.64 688.18,363.75 696.4,360.59 704,358 755.66,340.39 822,378.58 822,324 822,324 822,324 822,142 822,100.79 \
870.32,122.58 911,116 989.97,103.22 1225.7,100.04 1327,99.252"];
	normal_cov -> pvacseq	[_draw_="c 7 -#000000 B 13 759.07 366.53 766.1 363.49 774.31 360.26 782 358 829.05 344.14 887 373.05 887 324 887 324 887 324 887 142 887 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1326.84 100.74 1333.87 98.37 1326.89 95.84 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 910.5 231.1 0 47 10 -normal_cov ",
		label=normal_cov,
		lp="910.5,233",
		pos="e,1335.4,98.383 759.07,366.53 766.1,363.49 774.31,360.26 782,358 829.05,344.14 887,373.05 887,324 887,324 887,324 887,142 887,98.121 \
1204.8,97.073 1326.9,98.292"];
	top_score_metric -> pvacseq	[_draw_="c 7 -#000000 B 10 857.3 366.53 890.24 354.69 945 333.56 945 324 945 324 945 324 945 142 945 103.97 1215.3 99.22 1326.79 98.88 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1326.66 101.33 1333.66 98.87 1326.65 96.43 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 980 231.1 0 70 16 -top_score_metric ",
		label=top_score_metric,
		lp="980,233",
		pos="e,1335.2,98.862 857.3,366.53 890.24,354.69 945,333.56 945,324 945,324 945,324 945,142 945,103.97 1215.3,99.223 1326.8,98.88"];
	sample_name -> pvacseq	[_draw_="c 7 -#000000 B 13 3180.69 366.62 3172.52 363.52 3162.92 360.23 3154 358 3102.16 345.07 2916 377.43 2916 324 2916 324 2916 324 2916 \
142 2916 103.64 1680.52 99.5 1421.34 99.05 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1421.41 96.6 1414.4 99.04 1421.4 101.5 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2945 231.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="2945,233",
		pos="e,1412.9,99.04 3180.7,366.62 3172.5,363.52 3162.9,360.23 3154,358 3102.2,345.07 2916,377.43 2916,324 2916,324 2916,324 2916,142 \
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	sample_name -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 7 3203.59 366.79 3207.79 352.01 3214.69 320.23 3205 296 3196.94 275.84 3178.87 258.5 3164.83 247.33 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3236 298.6 0 58 11 -sample_name ",
		label=sample_name,
		lp="3236,300.5",
		pos="e,3158.3,242.35 3203.6,366.79 3207.8,352.01 3214.7,320.23 3205,296 3196.9,275.84 3178.9,258.5 3164.8,247.33"];
	sample_name -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 13 3220.79 366.54 3229.05 363.35 3238.85 360.01 3248 358 3288.52 349.09 3301.36 362.22 3341 350 3348.8 347.6 3349.26 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3405.97 334.52 3412.61 331.21 3405.36 329.66 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3372.5 343.6 0 31 6 -sample ",
		label=sample,
		lp="3372.5,345.5",
		pos="e,3414.1,331.02 3220.8,366.54 3229.1,363.35 3238.8,360.01 3248,358 3288.5,349.09 3301.4,362.22 3341,350 3348.8,347.6 3349.3,343.59 \
3357,341 3366.6,337.79 3385.4,334.72 3405.7,332.09"];
	sample_name -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 19 3202.87 366.53 3205.94 350.13 3209.86 314.09 3190 296 3175.28 282.6 3027.7 298.84 3011 288 3002.66 282.59 3005.51 \
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3040 276.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="3040,278",
		pos="e,3007.5,197.27 3202.9,366.53 3205.9,350.13 3209.9,314.09 3190,296 3175.3,282.6 3027.7,298.84 3011,288 3002.7,282.59 3005.5,276.85 \
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	add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 3221 268.5 3221 287.5 3465 287.5 3465 268.5 ",
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		fillcolor="#F3CEA1",
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		label="Add snv and indel bam-readcount files to a vcf",
		pos="3343,278",
		rects="3221,268.5,3465,287.5",
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	sample_name -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 3224.22 366.59 3256.76 354.78 3312.2 334.53 3314 333 3325.75 323.03 3333.49 307.05 3337.99 295.06 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3358 321.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="3358,323",
		pos="e,3340.7,287.17 3224.2,366.59 3256.8,354.78 3312.2,334.53 3314,333 3325.8,323.03 3333.5,307.05 3338,295.06"];
	n_threads -> pvacseq	[_draw_="c 7 -#000000 B 10 1196.98 366.58 1210.95 357.95 1229 343.09 1229 324 1229 324 1229 324 1229 142 1229 121.2 1284.54 109.68 1326.87 \
103.91 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1249.5 231.1 0 41 9 -n_threads ",
		label=n_threads,
		lp="1249.5,233",
		pos="e,1335.1,102.84 1197,366.58 1210.9,357.95 1229,343.09 1229,324 1229,324 1229,324 1229,142 1229,121.2 1284.5,109.68 1326.9,103.91"];
	variants_to_table_genotype_fields -> variants_to_table	[_draw_="c 7 -#000000 B 10 4017.41 366.5 4003.2 357.9 3985 343.15 3985 324 3985 324 3985 324 3985 142 3985 126.72 3974.6 116.84 3960.72 110.47 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 4018 231.1 0 66 15 -genotype_fields ",
		label=genotype_fields,
		lp="4018,233",
		pos="e,3953.2,107.45 4017.4,366.5 4003.2,357.9 3985,343.15 3985,324 3985,324 3985,324 3985,142 3985,126.72 3974.6,116.84 3960.7,110.47"];
	net_chop_method -> pvacseq	[_draw_="c 7 -#000000 B 13 2707.59 366.55 2667.77 353.63 2597 329.84 2597 324 2597 324 2597 324 2597 142 2597 79.29 2378.62 119.46 2316 116 \
1972.86 97.06 1558.46 97.76 1420.89 98.62 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1421.12 96.16 1414.13 98.66 1421.15 101.06 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2633.5 231.1 0 73 15 -net_chop_method ",
		label=net_chop_method,
		lp="2633.5,233",
		pos="e,1412.6,98.671 2707.6,366.55 2667.8,353.63 2597,329.84 2597,324 2597,324 2597,324 2597,142 2597,79.289 2378.6,119.46 2316,116 1972.9,\
97.055 1558.5,97.756 1420.9,98.617"];
	epitope_lengths -> pvacseq	[_draw_="c 7 -#000000 B 13 67.83 366.53 71.97 356.57 78 339.43 78 324 78 324 78 324 78 142 78 79.73 294.82 119.41 357 116 549.36 105.44 1152.6 \
100.53 1326.59 99.31 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 111.5 231.1 0 67 15 -epitope_lengths ",
		label=epitope_lengths,
		lp="111.5,233",
		pos="e,1335,99.254 67.826,366.53 71.971,356.57 78,339.43 78,324 78,324 78,324 78,142 78,79.731 294.82,119.41 357,116 549.36,105.44 1152.6,\
100.53 1326.6,99.312"];
	normal_sample_name -> pvacseq	[_draw_="c 7 -#000000 B 13 211.19 366.5 259.64 353.87 344 330.88 344 324 344 324 344 324 344 142 344 97.62 497.75 119.35 542 116 696.29 104.33 \
1174.87 100.29 1327.04 99.28 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1326.82 101.73 1333.8 99.23 1326.79 96.83 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 389 231.1 0 90 18 -normal_sample_name ",
		label=normal_sample_name,
		lp="389,233",
		pos="e,1335.3,99.224 211.19,366.5 259.64,353.87 344,330.88 344,324 344,324 344,324 344,142 344,97.622 497.75,119.35 542,116 696.29,104.33 \
1174.9,100.29 1327,99.278"];
	detect_variants_vcf -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 4 3509.05 366.58 3504.72 359.23 3498.33 348.37 3493.09 339.46 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3495.29 338.36 3489.63 333.57 3491.07 340.85 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3505.5 343.6 0 13 3 -vcf ",
		label=vcf,
		lp="3505.5,345.5",
		pos="e,3488.9,332.26 3509,366.58 3504.7,359.23 3498.3,348.37 3493.1,339.46"];
	tdna_cov -> pvacseq	[_draw_="c 7 -#000000 B 10 1340.66 366.69 1348.65 357.14 1360 340.63 1360 324 1360 324 1360 324 1360 142 1360 132.78 1362.95 122.96 1366.14 \
115.04 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1368.36 116.08 1368.96 108.69 1363.88 114.1 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1378.5 231.1 0 37 8 -tdna_cov ",
		label=tdna_cov,
		lp="1378.5,233",
		pos="e,1369.6,107.31 1340.7,366.69 1348.6,357.14 1360,340.63 1360,324 1360,324 1360,324 1360,142 1360,132.78 1362.9,122.96 1366.1,115.04"];
	additional_report_columns -> pvacseq	[_draw_="c 7 -#000000 B 10 1437.45 366.51 1433.6 356.52 1428 339.35 1428 324 1428 324 1428 324 1428 142 1428 128.3 1417.24 118.27 1405.32 \
111.35 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1406.52 109.21 1399.18 108.14 1404.25 113.56 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1482.5 231.1 0 109 25 -additional_report_columns ",
		label=additional_report_columns,
		lp="1482.5,233",
		pos="e,1397.8,107.44 1437.4,366.51 1433.6,356.52 1428,339.35 1428,324 1428,324 1428,324 1428,142 1428,128.3 1417.2,118.27 1405.3,111.35"];
	phased_proximal_variants_vcf -> pvacseq	[_draw_="c 7 -#000000 B 10 1587.71 366.61 1575.41 357.69 1559 342.35 1559 324 1559 324 1559 324 1559 142 1559 113.69 1475.79 104.01 1420.98 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1421.42 98.28 1414.29 100.33 1421.14 103.17 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1620 231.1 0 122 28 -phased_proximal_variants_vcf ",
		label=phased_proximal_variants_vcf,
		lp="1620,233",
		pos="e,1412.8,100.25 1587.7,366.61 1575.4,357.69 1559,342.35 1559,324 1559,324 1559,324 1559,142 1559,113.69 1475.8,104.01 1421,100.71"];
	net_chop_threshold -> pvacseq	[_draw_="c 7 -#000000 B 10 1736.34 366.69 1728.35 357.14 1717 340.63 1717 324 1717 324 1717 324 1717 142 1717 112.54 1515.18 102.97 1421.16 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1421.26 97.67 1414.19 99.91 1421.12 102.57 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1757.5 231.1 0 81 18 -net_chop_threshold ",
		label=net_chop_threshold,
		lp="1757.5,233",
		pos="e,1412.7,99.868 1736.3,366.69 1728.4,357.14 1717,340.63 1717,324 1717,324 1717,324 1717,142 1717,112.54 1515.2,102.97 1421.2,100.12"];
	downstream_sequence_length -> pvacseq	[_draw_="c 7 -#000000 B 10 1876.98 366.74 1866.95 357.47 1853 341.45 1853 324 1853 324 1853 324 1853 142 1853 98.94 1541.94 97.36 1421.15 \
98.36 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1421.28 95.91 1414.31 98.43 1421.33 100.81 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1916 231.1 0 126 26 -downstream_sequence_length ",
		label=downstream_sequence_length,
		lp="1916,233",
		pos="e,1412.8,98.44 1877,366.74 1867,357.47 1853,341.45 1853,324 1853,324 1853,324 1853,142 1853,98.938 1541.9,97.355 1421.2,98.364"];
	variants_to_table_fields -> variants_to_table	[_draw_="c 7 -#000000 B 10 4181.94 366.58 4168.52 357.85 4151 342.84 4151 324 4151 324 4151 324 4151 142 4151 123.4 4046.14 111.09 3969.61 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3970.05 102.15 3962.87 104.01 3969.64 107.03 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 4162.5 231.1 0 23 6 -fields ",
		label=fields,
		lp="4162.5,233",
		pos="e,3961.4,103.88 4181.9,366.58 4168.5,357.85 4151,342.84 4151,324 4151,324 4151,324 4151,142 4151,123.4 4046.1,111.09 3969.6,104.57"];
	gene_expression_file -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 7 3098.24 366.54 3105.79 351.18 3121.77 317.6 3132 288 3136.3 275.56 3139.98 261.1 3142.49 250.28 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3158.5 298.6 0 61 15 -expression_file ",
		label=expression_file,
		lp="3158.5,300.5",
		pos="e,3144.3,242.17 3098.2,366.54 3105.8,351.18 3121.8,317.6 3132,288 3136.3,275.56 3140,261.1 3142.5,250.28"];
	normal_vaf -> pvacseq	[_draw_="c 7 -#000000 B 10 2140.42 366.73 2138.65 356.67 2136 339.16 2136 324 2136 324 2136 324 2136 142 2136 106 1586.82 100.13 1420.91 \
99.18 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1421.36 96.74 1414.35 99.15 1421.34 101.64 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2159 231.1 0 46 10 -normal_vaf ",
		label=normal_vaf,
		lp="2159,233",
		pos="e,1412.8,99.139 2140.4,366.73 2138.6,356.67 2136,339.16 2136,324 2136,324 2136,324 2136,142 2136,106 1586.8,100.13 1420.9,99.183"];
	transcript_expression_file -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 10 2857.45 366.51 2853.6 356.52 2848 339.35 2848 324 2848 324 2848 324 2848 232 2848 211.65 2894.36 200.83 2938.65 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2938.74 197.59 2945.39 194.31 2938.14 192.73 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2878.5 276.1 0 61 15 -expression_file ",
		label=expression_file,
		lp="2878.5,278",
		pos="e,2946.9,194.13 2857.4,366.51 2853.6,356.52 2848,339.35 2848,324 2848,324 2848,324 2848,232 2848,211.65 2894.4,200.83 2938.7,195.13"];
	add_vep_fields_to_table	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3651.5 35.5 3651.5 54.5 3808.5 54.5 3808.5 35.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3730 42.5 0 141 28 -add VEP annotation to report ",
		height=0.27778,
		label="add VEP annotation to report",
		pos="3730,45",
		rects="3651.5,35.5,3808.5,54.5",
		width=2.1806];
	vep_to_table_fields -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 10 4307.02 366.58 4293.05 357.95 4275 343.09 4275 324 4275 324 4275 324 4275 97 4275 51.52 3970.19 45.54 3816.48 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3816.89 42.97 3809.89 45.42 3816.89 47.87 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 4296 208.6 0 42 10 -vep_fields ",
		label=vep_fields,
		lp="4296,210.5",
		pos="e,3808.4,45.416 4307,366.58 4293.1,357.95 4275,343.09 4275,324 4275,324 4275,324 4275,97 4275,51.516 3970.2,45.539 3816.5,45.417"];
	expn_val -> pvacseq	[_draw_="c 7 -#000000 B 13 2402.35 366.62 2397.32 356.74 2390 339.68 2390 324 2390 324 2390 324 2390 142 2390 81.94 2180.95 119.57 2121 116 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1421.44 96.42 1414.44 98.88 1421.44 101.32 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2408 231.1 0 36 8 -expn_val ",
		label=expn_val,
		lp="2408,233",
		pos="e,1412.9,98.877 2402.4,366.62 2397.3,356.74 2390,339.68 2390,324 2390,324 2390,324 2390,142 2390,81.944 2180.9,119.57 2121,116 1857,\
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	pvacseq -> mhc_i_filtered_epitopes	[_draw_="c 7 -#000000 B 7 1412.7 97.54 1507 98.26 1755.86 96.54 1960 63 1970.32 61.3 1981.37 58.9 1991.57 56.44 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1991.87 58.89 1998.07 54.82 1990.69 54.13 ",
		pos="e,1999.5,54.456 1412.7,97.544 1507,98.265 1755.9,96.535 1960,63 1970.3,61.304 1981.4,58.902 1991.6,56.436"];
	pvacseq -> combined_filtered_epitopes	[_draw_="c 7 -#000000 B 7 1335.13 94.57 1271.21 90.25 1140.01 80.07 1030 63 1018.26 61.18 1005.64 58.73 993.98 56.26 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 994.52 53.87 987.16 54.79 993.49 58.66 ",
		pos="e,985.69,54.468 1335.1,94.569 1271.2,90.254 1140,80.071 1030,63 1018.3,61.178 1005.6,58.73 993.98,56.261"];
	pvacseq -> mhc_ii_ranked_epitopes	[_draw_="c 7 -#000000 B 7 1335.12 91.43 1293.59 85.28 1225.91 74.7 1168 63 1158.29 61.04 1147.9 58.69 1138.14 56.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1138.97 54.06 1131.59 54.8 1137.83 58.82 ",
		pos="e,1130.1,54.449 1335.1,91.43 1293.6,85.283 1225.9,74.697 1168,63 1158.3,61.04 1147.9,58.692 1138.1,56.377"];
	pvacseq -> mhc_ii_filtered_epitopes	[_draw_="c 7 -#000000 B 4 1351.21 88.58 1328.14 80.05 1292.31 66.81 1266.74 57.36 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1267.66 55.09 1260.24 54.96 1265.96 59.68 ",
		pos="e,1258.8,54.434 1351.2,88.578 1328.1,80.052 1292.3,66.81 1266.7,57.359"];
	pvacseq -> mhc_i_ranked_epitopes	[_draw_="c 7 -#000000 B 4 1374 88.58 1374 81.52 1374 71.24 1374 62.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1376.45 62.78 1374 55.78 1371.55 62.78 ",
		pos="e,1374,54.265 1374,88.578 1374,81.523 1374,71.24 1374,62.547"];
	pvacseq -> mhc_ii_all_epitopes	[_draw_="c 7 -#000000 B 4 1394.81 88.58 1415.69 80.13 1448.02 67.04 1471.33 57.61 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1472.19 59.9 1477.76 55 1470.35 55.36 ",
		pos="e,1479.2,54.434 1394.8,88.578 1415.7,80.126 1448,67.039 1471.3,57.605"];
	pvacseq -> combined_ranked_epitopes	[_draw_="c 7 -#000000 B 7 1412.97 90.09 1450.06 83.43 1507.41 72.94 1557 63 1567.63 60.87 1579.05 58.47 1589.8 56.17 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1590.07 58.62 1596.39 54.75 1589.03 53.83 ",
		pos="e,1597.9,54.432 1413,90.088 1450.1,83.433 1507.4,72.939 1557,63 1567.6,60.869 1579,58.475 1589.8,56.171"];
	pvacseq -> combined_all_epitopes	[_draw_="c 7 -#000000 B 7 1412.77 94.93 1475.86 91.15 1604.51 81.74 1712 63 1721.83 61.29 1732.35 58.92 1742.1 56.51 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1742.43 58.95 1748.61 54.85 1741.22 54.2 ",
		pos="e,1750.1,54.476 1412.8,94.929 1475.9,91.151 1604.5,81.74 1712,63 1721.8,61.285 1732.3,58.924 1742.1,56.507"];
	pvacseq -> mhc_i_all_epitopes	[_draw_="c 7 -#000000 B 7 1412.81 97 1493.81 96.39 1686.49 91.74 1845 63 1853.5 61.46 1862.52 59.19 1870.89 56.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1871.53 59.18 1877.55 54.85 1870.14 54.48 ",
		pos="e,1879,54.417 1412.8,97.001 1493.8,96.391 1686.5,91.74 1845,63 1853.5,61.46 1862.5,59.192 1870.9,56.812"];
	add_gene_expression_data_to_vcf -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 7 3122.07 223.54 3107.36 218.39 3088.13 211.71 3071 206 3065.01 204 3058.62 201.91 3052.42 199.91 ",
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		label=vcf,
		lp="3101.5,210.5",
		pos="e,3044.7,197.44 3122.1,223.54 3107.4,218.39 3088.1,211.71 3071,206 3065,204 3058.6,201.91 3052.4,199.91"];
	tumor_rna_bam_readcount -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 3474.96 313.71 3467.05 306.54 3456.44 297.13 3454 296 3448.95 293.66 3443.64 291.64 3438.2 289.88 ",
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		label=vcf,
		lp="3470.5,300.5",
		pos="e,3430.1,287.5 3475,313.71 3467,306.54 3456.4,297.13 3454,296 3448.9,293.66 3443.6,291.64 3438.2,289.88"];
	tumor_rna_bam_readcount -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 3483.71 313.69 3483.03 307.85 3481.13 300.32 3476 296 3473.19 293.63 3469.05 291.59 3463.95 289.83 ",
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		label=snv_bam_readcount_tsv,
		lp="3530,300.5",
		pos="e,3455.8,287.45 3483.7,313.69 3483,307.85 3481.1,300.32 3476,296 3473.2,293.63 3469,291.59 3463.9,289.83"];
	tumor_rna_bam_readcount -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 3414.34 314.93 3382.71 311.42 3351.68 307.42 3349 305 3346.37 302.62 3344.77 299.34 3343.83 295.91 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3346.26 295.57 3342.83 289 3341.41 296.28 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3401 298.6 0 104 23 -indel_bam_readcount_tsv ",
		label=indel_bam_readcount_tsv,
		lp="3401,300.5",
		pos="e,3342.6,287.5 3414.3,314.93 3382.7,311.42 3351.7,307.42 3349,305 3346.4,302.62 3344.8,299.34 3343.8,295.91"];
	variants_to_table -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 4 3864.41 88.58 3837.15 79.94 3794.61 66.47 3764.7 56.99 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3765.48 54.67 3758.07 54.89 3764 59.34 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3840.5 73.6 0 13 3 -tsv ",
		label=tsv,
		lp="3840.5,75.5",
		pos="e,3756.6,54.434 3864.4,88.578 3837.1,79.941 3794.6,66.465 3764.7,56.992"];
	index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3360 133.5 3360 152.5 3422 152.5 3422 133.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3391 140.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="3391,143",
		rects="3360,133.5,3422,152.5",
		width=0.86111];
	index -> pvacseq	[_draw_="c 7 -#000000 B 7 3360.16 139.83 3284.96 134.62 3086.16 121.5 2920 116 2328.83 96.44 1609.88 97.96 1421.17 98.76 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1421.35 96.31 1414.36 98.79 1421.37 101.21 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3132.5 118.6 0 37 9 -input_vcf ",
		label=input_vcf,
		lp="3132.5,120.5",
		pos="e,1412.8,98.796 3360.2,139.83 3285,134.62 3086.2,121.5 2920,116 2328.8,96.442 1609.9,97.958 1421.2,98.76"];
	index -> variants_to_table	[_draw_="c 7 -#000000 B 7 3421.76 139.79 3464.47 136.69 3544.13 130.77 3612 125 3679.54 119.26 3756.22 112.06 3812.08 106.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3812.27 109.14 3819 106.03 3811.8 104.26 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3717.5 118.6 0 13 3 -vcf ",
		label=vcf,
		lp="3717.5,120.5",
		pos="e,3820.5,105.89 3421.8,139.79 3464.5,136.69 3544.1,130.77 3612,125 3679.5,119.26 3756.2,112.06 3812.1,106.7"];
	index -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 4 3420.79 133.56 3482.58 116.07 3624.59 75.85 3692.5 56.62 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3692.88 59.06 3698.95 54.79 3691.54 54.34 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3583.5 96.1 0 13 3 -vcf ",
		label=vcf,
		lp="3583.5,98",
		pos="e,3700.4,54.382 3420.8,133.56 3482.6,116.07 3624.6,75.851 3692.5,56.62"];
	add_vep_fields_to_table -> annotated_tsv;
	add_transcript_expression_data_to_vcf -> annotated_vcf	[_draw_="c 7 -#000000 B 10 3010.28 178.98 2994.83 163.54 2958.29 129.97 2920 116 2614.81 4.68 2508.73 130.66 2191 63 2184.44 61.6 2177.55 \
59.5 2171.13 57.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2172.15 55 2164.73 54.87 2170.45 59.6 ",
		pos="e,2163.3,54.341 3010.3,178.98 2994.8,163.54 2958.3,129.97 2920,116 2614.8,4.6768 2508.7,130.66 2191,63 2184.4,61.602 2177.5,59.497 \
2171.1,57.24"];
	add_transcript_expression_data_to_vcf -> index	[_draw_="c 7 -#000000 B 4 3089.48 178.76 3167.46 169.77 3289.47 155.7 3351.67 148.53 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3351.86 150.98 3358.54 147.74 3351.3 146.11 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3243.5 163.6 0 13 3 -vcf ",
		label=vcf,
		lp="3243.5,165.5",
		pos="e,3360,147.57 3089.5,178.76 3167.5,169.77 3289.5,155.7 3351.7,148.53"];
	add_tumor_rna_bam_readcount_to_vcf -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 4 3304.08 268.5 3272.11 261.53 3226.72 251.62 3192.77 244.21 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3193.68 241.9 3186.32 242.8 3192.64 246.69 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3268.5 253.6 0 13 3 -vcf ",
		label=vcf,
		lp="3268.5,255.5",
		pos="e,3184.8,242.48 3304.1,268.5 3272.1,261.53 3226.7,251.62 3192.8,244.21"];
	default1	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 3071 268.5 3071 287.5 3121 287.5 3121 268.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3096 275.5 0 34 6 -\"gene\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"gene\"",
		pos="3096,278",
		rects="3071,268.5,3121,287.5",
		width=0.69444];
	default1 -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 7 3087.36 268.81 3082.76 263.45 3078.83 256.45 3083 251 3084.01 249.68 3085.11 248.46 3086.28 247.33 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3087.47 249.51 3091.53 243.3 3084.49 245.62 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3103.5 253.6 0 41 9 -data_type ",
		label=data_type,
		lp="3103.5,255.5",
		pos="e,3092.7,242.38 3087.4,268.81 3082.8,263.45 3078.8,256.45 3083,251 3084,249.68 3085.1,248.46 3086.3,247.33"];
	default2	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 2988 223.5 2988 242.5 3060 242.5 3060 223.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3024 230.5 0 56 12 -\"transcript\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"transcript\"",
		pos="3024,233",
		rects="2988,223.5,3060,242.5",
		width=1];
	default2 -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 4 3022.84 223.71 3022.13 218.59 3021.19 211.85 3020.33 205.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3022.76 205.36 3019.36 198.76 3017.9 206.04 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3041.5 208.6 0 41 9 -data_type ",
		label=data_type,
		lp="3041.5,210.5",
		pos="e,3019.2,197.27 3022.8,223.71 3022.1,218.59 3021.2,211.85 3020.3,205.67"];
	default3	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 3264.5 313.5 3264.5 332.5 3311.5 332.5 3311.5 313.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3288 320.5 0 31 5 -\"RNA\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"RNA\"",
		pos="3288,323",
		rects="3264.5,313.5,3311.5,332.5",
		width=0.65278];
	default3 -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 3287.18 313.83 3287.07 308.2 3287.88 300.89 3292 296 3293.22 294.55 3294.57 293.23 3296.02 292.01 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3297.22 294.16 3301.67 288.22 3294.49 290.09 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3312.5 298.6 0 41 9 -data_type ",
		label=data_type,
		lp="3312.5,300.5",
		pos="e,3302.9,287.38 3287.2,313.83 3287.1,308.2 3287.9,300.89 3292,296 3293.2,294.55 3294.6,293.23 3296,292.01"];
}