digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 233 973 233 973 0 ",
		bb="0,0,973,233",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
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	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 170 8 225 965 225 965 170 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 213 0 84 15 -Workflow Inputs ",
			bb="8,170,965,225",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,215.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		estimate_sv_distance	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16.5 178.5 16.5 197.5 139.5 197.5 139.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 78 185.5 0 107 20 -estimate_sv_distance ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=estimate_sv_distance,
			pos="78,188",
			rects="16.5,178.5,139.5,197.5",
			width=1.7083];
		minimum_sv_calls	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 144 178.5 144 197.5 252 197.5 252 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 198 185.5 0 92 16 -minimum_sv_calls ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=minimum_sv_calls,
			pos="198,188",
			rects="144,178.5,252,197.5",
			width=1.5];
		snps_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 807.5 178.5 807.5 197.5 866.5 197.5 866.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 837 185.5 0 43 8 -snps_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=snps_vcf,
			pos="837,188",
			rects="807.5,178.5,866.5,197.5",
			width=0.81944];
		cohort_name	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 256 178.5 256 197.5 336 197.5 336 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 296 185.5 0 64 11 -cohort_name ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=cohort_name,
			pos="296,188",
			rects="256,178.5,336,197.5",
			width=1.1111];
		max_distance_to_merge	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 340.5 178.5 340.5 197.5 477.5 197.5 477.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 409 185.5 0 121 21 -max_distance_to_merge ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=max_distance_to_merge,
			pos="409,188",
			rects="340.5,178.5,477.5,197.5",
			width=1.9028];
		same_strand	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 482 178.5 482 197.5 562 197.5 562 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 522 185.5 0 64 11 -same_strand ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=same_strand,
			pos="522,188",
			rects="482,178.5,562,197.5",
			width=1.1111];
		genome_build	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 871 178.5 871 197.5 957 197.5 957 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 914 185.5 0 70 12 -genome_build ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=genome_build,
			pos="914,188",
			rects="871,178.5,957,197.5",
			width=1.1944];
		same_type	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 566.5 178.5 566.5 197.5 637.5 197.5 637.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 602 185.5 0 55 9 -same_type ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=same_type,
			pos="602,188",
			rects="566.5,178.5,637.5,197.5",
			width=0.98611];
		minimum_sv_size	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 641.5 178.5 641.5 197.5 746.5 197.5 746.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 694 185.5 0 89 15 -minimum_sv_size ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=minimum_sv_size,
			pos="694,188",
			rects="641.5,178.5,746.5,197.5",
			width=1.4583];
		sv_vcfs	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 750.5 178.5 750.5 197.5 803.5 197.5 803.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 777 185.5 0 37 7 -sv_vcfs ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=sv_vcfs,
			pos="777,188",
			rects="750.5,178.5,803.5,197.5",
			width=0.73611];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 599 8 599 63 840 63 840 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 653 15 0 92 16 -Workflow Outputs ",
			bb="599,8,840,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="653,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		merged_sv_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 607.5 35.5 607.5 54.5 698.5 54.5 698.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 653 42.5 0 75 13 -merged_sv_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=merged_sv_vcf,
			pos="653,45",
			rects="607.5,35.5,698.5,54.5",
			width=1.2639];
		merged_annotated_tsv	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 702.5 35.5 702.5 54.5 831.5 54.5 831.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 767 42.5 0 113 20 -merged_annotated_tsv ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=merged_annotated_tsv,
			pos="767,45",
			rects="702.5,35.5,831.5,54.5",
			width=1.7917];
	}
	merge_sv_vcfs	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 473 125.5 473 144.5 651 144.5 651 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 562 132.5 0 162 30 -Run SURVIVOR to merge SV calls ",
		height=0.27778,
		label="Run SURVIVOR to merge SV calls",
		pos="562,135",
		rects="473,125.5,651,144.5",
		width=2.4722];
	estimate_sv_distance -> merge_sv_vcfs	[_draw_="c 7 -#000000 B 7 91.66 178.63 105.89 170.4 129.13 158.32 151 153 208.2 139.09 362.19 136.04 464.57 135.64 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 464.58 138.09 471.57 135.62 464.56 133.19 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 195 155.6 0 88 20 -estimate_sv_distance ",
		label=estimate_sv_distance,
		lp="195,157.5",
		pos="e,473.08,135.61 91.662,178.63 105.89,170.4 129.13,158.32 151,153 208.2,139.09 362.19,136.04 464.57,135.64"];
	minimum_sv_calls -> merge_sv_vcfs	[_draw_="c 7 -#000000 B 7 210.28 178.53 222.88 170.35 243.36 158.42 263 153 299.74 142.86 392.45 138.76 464.98 137.1 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 464.82 139.56 471.76 136.96 464.71 134.66 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 299.5 155.6 0 73 16 -minimum_sv_calls ",
		label=minimum_sv_calls,
		lp="299.5,157.5",
		pos="e,473.28,136.92 210.28,178.53 222.88,170.35 243.36,158.42 263,153 299.74,142.86 392.45,138.76 464.98,137.1"];
	annotate_variants	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 751.5 80.5 751.5 99.5 856.5 99.5 856.5 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 804 87.5 0 89 17 -annotate_variants ",
		height=0.27778,
		label=annotate_variants,
		pos="804,90",
		rects="751.5,80.5,856.5,99.5",
		width=1.4583];
	snps_vcf -> annotate_variants	[_draw_="c 7 -#000000 B 4 834.19 178.82 828.76 163.02 816.75 128.09 809.62 107.36 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 811.99 106.69 807.39 100.87 807.35 108.29 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 840 133.1 0 36 8 -snps_vcf ",
		label=snps_vcf,
		lp="840,135",
		pos="e,806.9,99.438 834.19,178.82 828.76,163.02 816.75,128.09 809.62,107.36"];
	cohort_name -> merge_sv_vcfs	[_draw_="c 7 -#000000 B 7 308.1 178.64 320.52 170.54 340.69 158.68 360 153 379.66 147.21 423.26 143.17 464.93 140.49 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 464.89 142.95 471.72 140.06 464.58 138.06 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 387 155.6 0 54 11 -cohort_name ",
		label=cohort_name,
		lp="387,157.5",
		pos="e,473.23,139.97 308.1,178.64 320.52,170.54 340.69,158.68 360,153 379.66,147.21 423.26,143.17 464.93,140.49"];
	max_distance_to_merge -> merge_sv_vcfs	[_draw_="c 7 -#000000 B 7 409.8 178.57 411.02 170.66 414.13 159.15 422 153 429.64 147.03 445.95 143.13 464.83 140.59 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 464.91 143.04 471.56 139.76 464.32 138.18 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 471.5 155.6 0 99 21 -max_distance_to_merge ",
		label=max_distance_to_merge,
		lp="471.5,157.5",
		pos="e,473.06,139.58 409.8,178.57 411.02,170.66 414.13,159.15 422,153 429.64,147.03 445.95,143.13 464.83,140.59"];
	same_strand -> merge_sv_vcfs	[_draw_="c 7 -#000000 B 7 520.85 178.65 520.29 171.23 520.66 160.43 526 153 526.86 151.8 527.83 150.69 528.88 149.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 530.34 151.61 534.42 145.42 527.37 147.72 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 552.5 155.6 0 53 11 -same_strand ",
		label=same_strand,
		lp="552.5,157.5",
		pos="e,535.62,144.5 520.85,178.65 520.29,171.23 520.66,160.43 526,153 526.86,151.8 527.83,150.69 528.88,149.65"];
	genome_build -> annotate_variants	[_draw_="c 7 -#000000 B 7 907.89 178.68 898.38 166.08 879.04 141.86 859 125 849.42 116.94 837.74 109.45 827.62 103.56 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 828.85 101.44 821.55 100.13 826.44 105.71 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 908 133.1 0 58 12 -genome_build ",
		label=genome_build,
		lp="908,135",
		pos="e,820.24,99.384 907.89,178.68 898.38,166.08 879.04,141.86 859,125 849.42,116.94 837.74,109.45 827.62,103.56"];
	same_type -> merge_sv_vcfs	[_draw_="c 7 -#000000 B 7 597.28 178.51 593.14 171.39 586.75 161.11 580 153 579.21 152.05 578.37 151.1 577.5 150.16 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 579.34 148.53 572.65 145.32 575.88 152 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 608.5 155.6 0 45 9 -same_type ",
		label=same_type,
		lp="608.5,157.5",
		pos="e,571.58,144.25 597.28,178.51 593.14,171.39 586.75,161.11 580,153 579.21,152.05 578.37,151.1 577.5,150.16"];
	minimum_sv_size -> merge_sv_vcfs	[_draw_="c 7 -#000000 B 7 681.18 178.66 668.97 171.03 649.86 159.92 632 153 625.93 150.65 619.44 148.55 612.95 146.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 613.61 144.34 606.21 144.88 612.33 149.07 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 686.5 155.6 0 71 15 -minimum_sv_size ",
		label=minimum_sv_size,
		lp="686.5,157.5",
		pos="e,604.75,144.49 681.18,178.66 668.97,171.03 649.86,159.92 632,153 625.93,150.65 619.44,148.55 612.95,146.7"];
	sv_vcfs -> merge_sv_vcfs	[_draw_="c 7 -#000000 B 7 766.98 178.69 756.66 170.63 739.75 158.8 723 153 702.87 146.02 680.54 141.69 659.08 139.04 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 659.64 136.64 652.41 138.28 659.08 141.51 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 749.5 155.6 0 17 4 -vcfs ",
		label=vcfs,
		lp="749.5,157.5",
		pos="e,650.9,138.11 766.98,178.69 756.66,170.63 739.75,158.8 723,153 702.87,146.02 680.54,141.69 659.08,139.04"];
	bgzip_merged_sv_vcf	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 588.5 80.5 588.5 99.5 653.5 99.5 653.5 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 621 87.5 0 49 9 -bgzip VCF ",
		height=0.27778,
		label="bgzip VCF",
		pos="621,90",
		rects="588.5,80.5,653.5,99.5",
		width=0.90278];
	merge_sv_vcfs -> bgzip_merged_sv_vcf	[_draw_="c 7 -#000000 B 4 573.66 125.5 581.9 119.5 593.12 111.32 602.57 104.43 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 603.93 106.47 608.14 100.37 601.04 102.51 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 602.5 110.6 0 13 4 -file ",
		label=file,
		lp="602.5,112.5",
		pos="e,609.37,99.478 573.66,125.5 581.9,119.5 593.12,111.32 602.57,104.43"];
	merge_sv_vcfs -> annotate_variants	[_draw_="c 7 -#000000 B 4 609.81 125.5 649.59 118.44 706.26 108.37 748.12 100.93 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 748.33 103.38 754.8 99.74 747.48 98.56 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 722.5 110.6 0 37 9 -input_vcf ",
		label=input_vcf,
		lp="722.5,112.5",
		pos="e,756.29,99.478 609.81,125.5 649.59,118.44 706.26,108.37 748.12,100.93"];
	bgzip_merged_sv_vcf -> merged_sv_vcf	[_draw_="c 7 -#000000 B 4 627.17 80.71 631.33 75.12 636.94 67.58 641.87 60.96 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 643.73 62.56 645.95 55.48 639.8 59.63 ",
		pos="e,646.85,54.265 627.17,80.709 631.33,75.117 636.94,67.579 641.87,60.957"];
	annotate_variants -> merged_annotated_tsv	[_draw_="c 7 -#000000 B 4 796.87 80.71 791.95 75 785.29 67.26 779.51 60.54 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 781.52 59.12 775.1 55.41 777.81 62.32 ",
		pos="e,774.11,54.265 796.87,80.709 791.95,74.998 785.29,67.258 779.51,60.535"];
}