digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 233 564 233 564 0 ",
		bb="0,0,564,233",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
	];
	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 170 8 225 556 225 556 170 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 213 0 84 15 -Workflow Inputs ",
			bb="8,170,556,225",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,215.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		reference	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16.5 178.5 16.5 197.5 79.5 197.5 79.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 48 185.5 0 47 9 -reference ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=reference,
			pos="48,188",
			rects="16.5,178.5,79.5,197.5",
			width=0.875];
		bams	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 84 178.5 84 197.5 128 197.5 128 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 106 185.5 0 28 4 -bams ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=bams,
			pos="106,188",
			rects="84,178.5,128,197.5",
			width=0.61111];
		downsample_probability	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 132.5 178.5 132.5 197.5 269.5 197.5 269.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 201 185.5 0 121 22 -downsample_probability ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=downsample_probability,
			pos="201,188",
			rects="132.5,178.5,269.5,197.5",
			width=1.9028];
		known_indels	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 273.5 178.5 273.5 197.5 356.5 197.5 356.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 315 185.5 0 67 12 -known_indels ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=known_indels,
			pos="315,188",
			rects="273.5,178.5,356.5,197.5",
			width=1.1528];
		dbsnp_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 361 178.5 361 197.5 427 197.5 427 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 394 185.5 0 50 9 -dbsnp_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=dbsnp_vcf,
			pos="394,188",
			rects="361,178.5,427,197.5",
			width=0.91667];
		readgroups	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 431.5 178.5 431.5 197.5 502.5 197.5 502.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 467 185.5 0 55 10 -readgroups ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=readgroups,
			pos="467,188",
			rects="431.5,178.5,502.5,197.5",
			width=0.98611];
		mills	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 506.5 178.5 506.5 197.5 547.5 197.5 547.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 527 185.5 0 25 5 -mills ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=mills,
			pos="527,188",
			rects="506.5,178.5,547.5,197.5",
			width=0.56944];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 276 8 276 63 494 63 494 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 330 15 0 92 16 -Workflow Outputs ",
			bb="276,8,494,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="330,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		bam	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 284 35.5 284 54.5 322 54.5 322 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 303 42.5 0 22 3 -bam ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=bam,
			pos="303,45",
			rects="284,35.5,322,54.5",
			width=0.52778];
		mark_duplicates_metrics_file	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 326 35.5 326 54.5 486 54.5 486 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 406 42.5 0 144 28 -mark_duplicates_metrics_file ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=mark_duplicates_metrics_file,
			pos="406,45",
			rects="326,35.5,486,54.5",
			width=2.2222];
	}
	align_workflow	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 287 80.5 287 99.5 421 99.5 421 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 354 87.5 0 118 21 -Unaligned BAM to BQSR ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="Unaligned BAM to BQSR",
		pos="354,90",
		rects="287,80.5,421,99.5",
		width=1.8611];
	reference -> align_workflow	[_draw_="c 7 -#000000 B 7 47.73 178.65 47.8 165.1 50.09 138.48 66 125 97.12 98.64 204.19 92.02 278.62 90.72 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 278.6 93.17 285.56 90.62 278.52 88.27 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 86 133.1 0 40 9 -reference ",
		label=reference,
		lp="86,135",
		pos="e,287.07,90.595 47.734,178.65 47.799,165.1 50.094,138.48 66,125 97.117,98.637 204.19,92.025 278.62,90.723"];
	downsample	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 108.5 125.5 108.5 144.5 263.5 144.5 263.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 186 132.5 0 139 24 -downsample unaligned BAM ",
		height=0.27778,
		label="downsample unaligned BAM",
		pos="186,135",
		rects="108.5,125.5,263.5,144.5",
		width=2.1528];
	reference -> downsample	[_draw_="c 7 -#000000 B 7 59.86 178.5 71.2 170.77 89.02 159.58 106 153 112.38 150.53 119.18 148.39 126.03 146.53 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 126.43 148.96 132.61 144.87 125.22 144.21 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 126 155.6 0 40 9 -reference ",
		label=reference,
		lp="126,157.5",
		pos="e,134.08,144.49 59.864,178.5 71.199,170.77 89.023,159.58 106,153 112.38,150.53 119.18,148.39 126.03,146.53"];
	bams -> downsample	[_draw_="c 7 -#000000 B 10 118.29 178.64 122.58 175.81 127.45 172.69 132 170 138.5 166.15 140.52 165.88 147 162 153.73 157.98 160.91 153.3 \
167.26 149.03 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 168.59 151.09 173 145.13 165.83 147.04 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 170.5 155.6 0 19 3 -bam ",
		label=bam,
		lp="170.5,157.5",
		pos="e,174.25,144.27 118.29,178.64 122.58,175.81 127.45,172.69 132,170 138.5,166.15 140.52,165.88 147,162 153.73,157.98 160.91,153.3 \
167.26,149.03"];
	downsample_probability -> downsample	[_draw_="c 7 -#000000 B 7 198.97 178.56 197.25 171.65 194.66 161.64 192 153 191.92 152.73 191.83 152.46 191.75 152.19 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 194.11 151.54 189.55 145.69 189.47 153.11 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 216 155.6 0 44 11 -probability ",
		label=probability,
		lp="216,157.5",
		pos="e,189.06,144.26 198.97,178.56 197.25,171.65 194.66,161.64 192,153 191.92,152.73 191.83,152.46 191.75,152.19"];
	known_indels -> align_workflow	[_draw_="c 7 -#000000 B 7 315.79 178.63 317.18 166.38 320.75 143.07 329 125 332.08 118.25 336.63 111.52 341.01 105.85 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 342.86 107.46 345.39 100.49 339.07 104.37 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 357 133.1 0 56 12 -known_indels ",
		label=known_indels,
		lp="357,135",
		pos="e,346.35,99.317 315.79,178.63 317.18,166.38 320.75,143.07 329,125 332.08,118.25 336.63,111.52 341.01,105.85"];
	dbsnp_vcf -> align_workflow	[_draw_="c 7 -#000000 B 7 393.68 178.57 392.92 166.25 390.41 142.85 382 125 378.68 117.94 373.55 111.1 368.59 105.44 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 370.55 103.95 363.99 100.49 366.96 107.28 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 409 133.1 0 42 9 -dbsnp_vcf ",
		label=dbsnp_vcf,
		lp="409,135",
		pos="e,362.96,99.378 393.68,178.57 392.92,166.25 390.41,142.85 382,125 378.68,117.94 373.55,111.1 368.59,105.44"];
	readgroups -> align_workflow	[_draw_="c 7 -#000000 B 7 464.11 178.67 459.2 165.62 448.06 140.28 431 125 419.9 115.06 405.42 107.64 392.02 102.32 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 393.12 100.11 385.71 99.95 391.4 104.7 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 470 133.1 0 48 10 -readgroups ",
		label=readgroups,
		lp="470,135",
		pos="e,384.29,99.419 464.11,178.67 459.2,165.62 448.06,140.28 431,125 419.9,115.06 405.42,107.64 392.02,102.32"];
	mills -> align_workflow	[_draw_="c 7 -#000000 B 7 525.11 178.75 521.58 165.34 512.72 138.91 495 125 476.22 110.26 452.01 101.77 428.96 96.93 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 429.7 94.58 422.36 95.65 428.76 99.39 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 520.5 133.1 0 19 5 -mills ",
		label=mills,
		lp="520.5,135",
		pos="e,420.87,95.366 525.11,178.75 521.58,165.34 512.72,138.91 495,125 476.22,110.26 452.01,101.77 428.96,96.93"];
	align_workflow -> bam	[_draw_="c 7 -#000000 B 4 344.17 80.71 337.11 74.76 327.44 66.61 319.25 59.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 320.89 57.88 313.96 55.24 317.73 61.63 ",
		pos="e,312.8,54.265 344.17,80.709 337.11,74.76 327.44,66.609 319.25,59.701"];
	align_workflow -> mark_duplicates_metrics_file	[_draw_="c 7 -#000000 B 4 364.27 80.5 371.4 74.62 381.04 66.64 389.26 59.84 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 390.75 61.79 394.58 55.44 387.63 58.02 ",
		pos="e,395.75,54.478 364.27,80.505 371.4,74.615 381.04,66.64 389.26,59.841"];
	downsample -> align_workflow	[_draw_="c 7 -#000000 B 4 219.19 125.5 246 118.64 283.86 108.95 312.64 101.59 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 313.24 103.96 319.41 99.85 312.02 99.22 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 296.5 110.6 0 23 4 -bams ",
		label=bams,
		lp="296.5,112.5",
		pos="e,320.88,99.478 219.19,125.5 246,118.64 283.86,108.95 312.64,101.59"];
}