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			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1241 680.5 0 106 20 -mutect_scatter_count ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=mutect_scatter_count,
			pos="1241,683",
			rects="1180,673.5,1302,692.5",
			width=1.6944];
		strelka_exome_mode	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 894.5 673.5 894.5 692.5 1015.5 692.5 1015.5 673.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 955 680.5 0 105 18 -strelka_exome_mode ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=strelka_exome_mode,
			pos="955,683",
			rects="894.5,673.5,1015.5,692.5",
			width=1.6806];
		varscan_min_var_freq	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 131.5 673.5 131.5 692.5 256.5 692.5 256.5 673.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 194 680.5 0 109 20 -varscan_min_var_freq ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=varscan_min_var_freq,
			pos="194,683",
			rects="131.5,673.5,256.5,692.5",
			width=1.7361];
		varscan_strand_filter	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 496.5 673.5 496.5 692.5 615.5 692.5 615.5 673.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 556 680.5 0 103 21 -varscan_strand_filter ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=varscan_strand_filter,
			pos="556,683",
			rects="496.5,673.5,615.5,692.5",
			width=1.6528];
	}
	varscan	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 545.5 620.5 545.5 639.5 648.5 639.5 648.5 620.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 597 627.5 0 87 16 -Varscan Workflow ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="Varscan Workflow",
		pos="597,630",
		rects="545.5,620.5,648.5,639.5",
		width=1.4306];
	normal_bam -> varscan	[_draw_="c 7 -#000000 B 13 1119.86 673.59 1112.15 670.24 1102.82 666.77 1094 665 1001.16 646.41 760.87 675.43 668 657 657.23 654.86 655.29 \
651.83 645 648 640 646.14 634.69 644.21 629.49 642.34 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 630.32 640.04 622.9 640 628.68 644.66 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 693.5 650.6 0 51 10 -normal_bam ",
		label=normal_bam,
		lp="693.5,652.5",
		pos="e,621.47,639.49 1119.9,673.59 1112.1,670.24 1102.8,666.77 1094,665 1001.2,646.41 760.87,675.43 668,657 657.23,654.86 655.29,651.83 \
645,648 640,646.14 634.69,644.21 629.49,642.34"];
	pindel	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 1347 620.5 1347 639.5 1481 639.5 1481 620.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1414 627.5 0 118 24 -pindel parallel workflow ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="pindel parallel workflow",
		pos="1414,630",
		rects="1347,620.5,1481,639.5",
		width=1.8611];
	normal_bam -> pindel	[_draw_="c 7 -#000000 B 13 1154.61 673.67 1162.25 670.42 1171.4 667 1180 665 1201.72 659.96 1260.04 666.94 1280 657 1284.79 654.61 1283.28 \
650.51 1288 648 1293.08 645.3 1314.9 641.98 1339 638.99 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1339.08 641.45 1345.73 638.18 1338.49 636.59 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1313.5 650.6 0 51 10 -normal_bam ",
		label=normal_bam,
		lp="1313.5,652.5",
		pos="e,1347.2,637.99 1154.6,673.67 1162.2,670.42 1171.4,667 1180,665 1201.7,659.96 1260,666.94 1280,657 1284.8,654.61 1283.3,650.51 1288,\
648 1293.1,645.3 1314.9,641.98 1339,638.99"];
	strelka	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 910.5 620.5 910.5 639.5 1007.5 639.5 1007.5 620.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 959 627.5 0 81 16 -strelka workflow ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="strelka workflow",
		pos="959,630",
		rects="910.5,620.5,1007.5,639.5",
		width=1.3472];
	normal_bam -> strelka	[_draw_="c 7 -#000000 B 7 1129.43 673.67 1120.47 663.86 1106.56 648.78 1105 648 1089.59 640.25 1049.75 635.95 1015.58 633.61 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1016.14 631.19 1008.99 633.18 1015.82 636.08 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1138.5 650.6 0 51 10 -normal_bam ",
		label=normal_bam,
		lp="1138.5,652.5",
		pos="e,1007.5,633.08 1129.4,673.67 1120.5,663.86 1106.6,648.78 1105,648 1089.6,640.25 1049.8,635.95 1015.6,633.61"];
	mutect	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 1180 620.5 1180 639.5 1318 639.5 1318 620.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1249 627.5 0 122 24 -mutect parallel workflow ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="mutect parallel workflow",
		pos="1249,630",
		rects="1180,620.5,1318,639.5",
		width=1.9167];
	normal_bam -> mutect	[_draw_="c 7 -#000000 B 7 1146.34 673.66 1157.04 664.17 1173.54 649.75 1177 648 1181.59 645.68 1186.5 643.67 1191.53 641.93 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1192.11 644.32 1198.04 639.87 1190.63 639.64 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1202.5 650.6 0 51 10 -normal_bam ",
		label=normal_bam,
		lp="1202.5,652.5",
		pos="e,1199.5,639.41 1146.3,673.66 1157,664.17 1173.5,649.75 1177,648 1181.6,645.68 1186.5,643.67 1191.5,641.93"];
	normal_bam_readcount	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2195 395.5 2195 414.5 2305 414.5 2305 395.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2250 402.5 0 94 17 -run bam-readcount ",
		height=0.27778,
		label="run bam-readcount",
		pos="2250,405",
		rects="2195,395.5,2305,414.5",
		width=1.5278];
	normal_bam -> normal_bam_readcount	[_draw_="c 7 -#000000 B 31 1154.14 673.57 1161.85 670.22 1171.18 666.75 1180 665 1238.21 653.46 1654.82 661.34 1714 657 1866.02 645.84 1909.95 \
661.84 2054 612 2091.1 599.17 2110.56 601.1 2130 567 2131.98 563.52 2130.92 561.89 2130 558 2129.09 554.13 2126.91 553.87 2126 550 \
2123.96 541.35 2121.72 537.79 2126 530 2144.01 497.27 2162.1 498.34 2197 485 2212.78 478.97 2336.08 472.89 2347 460 2364.46 439.39 \
2333.74 425.17 2302.36 416.51 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2303.25 414.21 2295.86 414.81 2302.01 418.95 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2135.5 538.1 0 19 3 -bam ",
		label=bam,
		lp="2135.5,540",
		pos="e,2294.4,414.43 1154.1,673.57 1161.8,670.22 1171.2,666.75 1180,665 1238.2,653.46 1654.8,661.34 1714,657 1866,645.84 1909.9,661.84 \
2054,612 2091.1,599.17 2110.6,601.1 2130,567 2132,563.52 2130.9,561.89 2130,558 2129.1,554.13 2126.9,553.87 2126,550 2124,541.35 \
2121.7,537.79 2126,530 2144,497.27 2162.1,498.34 2197,485 2212.8,478.97 2336.1,472.89 2347,460 2364.5,439.39 2333.7,425.17 2302.4,\
416.51"];
	filter_vcf	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 2483 215.5 2483 234.5 2611 234.5 2611 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2547 222.5 0 112 25 -Apply filters to VCF file ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="Apply filters to VCF file",
		pos="2547,225",
		rects="2483,215.5,2611,234.5",
		width=1.7778];
	cle_vcf_filter -> filter_vcf	[_draw_="c 7 -#000000 B 16 2958.85 673.65 2951.13 670.31 2941.8 666.83 2933 665 2920.05 662.31 2705.61 664.91 2695 657 2617.59 599.29 2626 \
547.55 2626 451 2626 451 2626 451 2626 269 2626 253.71 2614.44 243.82 2600.16 237.45 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2601.32 235.27 2593.9 234.98 2599.52 239.83 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2658.5 448.1 0 65 17 -do_cle_vcf_filter ",
		label=do_cle_vcf_filter,
		lp="2658.5,450",
		pos="e,2592.5,234.42 2958.8,673.65 2951.1,670.31 2941.8,666.83 2933,665 2920,662.31 2705.6,664.91 2695,657 2617.6,599.29 2626,547.55 \
2626,451 2626,451 2626,451 2626,269 2626,253.71 2614.4,243.82 2600.2,237.45"];
	filter_minimum_depth -> filter_vcf	[_draw_="c 7 -#000000 B 16 3054.65 673.54 3042.88 670.27 3028.88 666.87 3016 665 2916.97 650.66 2889.86 672.5 2791 657 2749.02 650.42 2699 \
673.49 2699 631 2699 631 2699 631 2699 269 2699 250.82 2658.24 239.94 2618.93 233.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2619.37 231.26 2612.08 232.63 2618.63 236.1 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2743 448.1 0 88 20 -filter_minimum_depth ",
		label=filter_minimum_depth,
		lp="2743,450",
		pos="e,2610.6,232.4 3054.7,673.54 3042.9,670.27 3028.9,666.87 3016,665 2917,650.66 2889.9,672.5 2791,657 2749,650.42 2699,673.49 2699,\
631 2699,631 2699,631 2699,269 2699,250.82 2658.2,239.94 2618.9,233.67"];
	annotate_variants	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1883.5 440.5 1883.5 459.5 2056.5 459.5 2056.5 440.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1970 447.5 0 157 32 -Ensembl Variant Effect Predictor ",
		height=0.27778,
		label="Ensembl Variant Effect Predictor",
		pos="1970,450",
		rects="1883.5,440.5,2056.5,459.5",
		width=2.4028];
	vep_pick -> annotate_variants	[_draw_="c 7 -#000000 B 19 2170.12 673.59 2175.73 670.76 2182.1 667.65 2188 665 2196.73 661.08 2202.63 664.93 2208 657 2221.46 637.13 2219.96 \
623.81 2208 603 2196.34 582.71 2135.22 564.69 2117 550 2078.55 519 2084.59 493.01 2042 468 2038.36 465.86 2034.46 463.99 2030.43 \
462.35 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2031.41 460.1 2023.99 460.01 2029.73 464.71 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2156.5 560.6 0 17 4 -pick ",
		label=pick,
		lp="2156.5,562.5",
		pos="e,2022.6,459.49 2170.1,673.59 2175.7,670.76 2182.1,667.65 2188,665 2196.7,661.08 2202.6,664.93 2208,657 2221.5,637.13 2220,623.81 \
2208,603 2196.3,582.71 2135.2,564.69 2117,550 2078.6,519 2084.6,493.01 2042,468 2038.4,465.86 2034.5,463.99 2030.4,462.35"];
	varscan_max_normal_freq -> varscan	[_draw_="c 7 -#000000 B 10 659.45 673.58 646.01 670.47 630.35 667.18 616 665 605.64 663.42 529.09 664.72 522 657 512.63 646.8 522.17 640.6 \
537.22 636.84 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 537.7 639.24 544.04 635.39 536.69 634.45 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 557 650.6 0 70 15 -max_normal_freq ",
		label=max_normal_freq,
		lp="557,652.5",
		pos="e,545.52,635.08 659.45,673.58 646.01,670.47 630.35,667.18 616,665 605.64,663.42 529.09,664.72 522,657 512.63,646.8 522.17,640.6 \
537.22,636.84"];
	reference -> filter_vcf	[_draw_="c 7 -#000000 B 40 1538.2 673.57 1544.62 670.22 1552.46 666.75 1560 665 1575.91 661.32 2134.08 665.54 2148 657 2190.36 631.01 2166.07 \
594.32 2200 558 2204.63 553.04 2208.06 554.65 2213 550 2220.9 542.56 2218.63 536.9 2227 530 2271.67 493.17 2297.4 508.46 2346 477 \
2355.51 470.84 2357.63 468.6 2365 460 2371.9 451.95 2369.61 446.48 2378 440 2405.8 418.51 2421.04 429.59 2453 415 2488.71 398.7 \
2505.95 401.78 2529 370 2537.42 358.39 2536 352.84 2536 338.5 2536 338.5 2536 338.5 2536 269 2536 260.04 2538.27 250.35 2540.74 \
242.44 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2543.06 243.25 2543.03 235.83 2538.43 241.65 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2398 448.1 0 40 9 -reference ",
		label=reference,
		lp="2398,450",
		pos="e,2543.5,234.4 1538.2,673.57 1544.6,670.22 1552.5,666.75 1560,665 1575.9,661.32 2134.1,665.54 2148,657 2190.4,631.01 2166.1,594.32 \
2200,558 2204.6,553.04 2208.1,554.65 2213,550 2220.9,542.56 2218.6,536.9 2227,530 2271.7,493.17 2297.4,508.46 2346,477 2355.5,470.84 \
2357.6,468.6 2365,460 2371.9,451.95 2369.6,446.48 2378,440 2405.8,418.51 2421,429.59 2453,415 2488.7,398.7 2506,401.78 2529,370 \
2537.4,358.39 2536,352.84 2536,338.5 2536,338.5 2536,338.5 2536,269 2536,260.04 2538.3,250.35 2540.7,242.44"];
	reference -> varscan	[_draw_="c 7 -#000000 B 13 1510.22 673.58 1503.98 670.22 1496.36 666.75 1489 665 1432.03 651.44 1018.89 670.89 962 657 953.31 654.88 952.65 \
650.27 944 648 891.54 634.25 741.56 631.43 656.95 630.97 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 657 628.52 649.99 630.94 656.98 633.42 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 982 650.6 0 40 9 -reference ",
		label=reference,
		lp="982,652.5",
		pos="e,648.47,630.93 1510.2,673.58 1504,670.22 1496.4,666.75 1489,665 1432,651.44 1018.9,670.89 962,657 953.31,654.88 952.65,650.27 944,\
648 891.54,634.25 741.56,631.43 656.95,630.97"];
	tumor_bam_readcount	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1862 395.5 1862 414.5 1972 414.5 1972 395.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1917 402.5 0 94 17 -run bam-readcount ",
		height=0.27778,
		label="run bam-readcount",
		pos="1917,405",
		rects="1862,395.5,1972,414.5",
		width=1.5278];
	reference -> tumor_bam_readcount	[_draw_="c 7 -#000000 B 28 1538.58 673.52 1544.94 670.25 1552.63 666.85 1560 665 1594.32 656.39 1686.81 671.67 1719 657 1733.59 650.35 1744 \
647.03 1744 631 1744 631 1744 631 1744 516.5 1744 502.16 1741.83 496.03 1751 485 1763.35 470.15 1772.29 472.82 1791 468 1807.87 \
463.65 1853.98 468.83 1869 460 1878.36 454.5 1876.03 448.31 1883 440 1888.88 433 1895.94 425.76 1902.11 419.78 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1903.43 421.91 1906.81 415.31 1900.05 418.36 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1776.5 538.1 0 65 15 -reference_fasta ",
		label=reference_fasta,
		lp="1776.5,540",
		pos="e,1907.9,414.27 1538.6,673.52 1544.9,670.25 1552.6,666.85 1560,665 1594.3,656.39 1686.8,671.67 1719,657 1733.6,650.35 1744,647.03 \
1744,631 1744,631 1744,631 1744,516.5 1744,502.16 1741.8,496.03 1751,485 1763.4,470.15 1772.3,472.82 1791,468 1807.9,463.65 1854,\
468.83 1869,460 1878.4,454.5 1876,448.31 1883,440 1888.9,433 1895.9,425.76 1902.1,419.78"];
	reference -> pindel	[_draw_="c 7 -#000000 B 13 1538.6 673.6 1544.96 670.34 1552.65 666.93 1560 665 1571.96 661.86 1662.58 666.05 1671 657 1673.72 654.07 1673.73 \
650.92 1671 648 1658.72 634.88 1560.46 631.53 1489.09 630.86 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1489.5 628.41 1482.48 630.81 1489.46 633.31 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1693 650.6 0 40 9 -reference ",
		label=reference,
		lp="1693,652.5",
		pos="e,1481,630.79 1538.6,673.6 1545,670.34 1552.6,666.93 1560,665 1572,661.86 1662.6,666.05 1671,657 1673.7,654.07 1673.7,650.92 1671,\
648 1658.7,634.88 1560.5,631.53 1489.1,630.86"];
	variants_to_table	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2650.5 72.5 2650.5 91.5 2791.5 91.5 2791.5 72.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2721 79.5 0 125 25 -SelectVariants (GATK 3.6) ",
		height=0.27778,
		label="SelectVariants (GATK 3.6)",
		pos="2721,82",
		rects="2650.5,72.5,2791.5,91.5",
		width=1.9583];
	reference -> variants_to_table	[_draw_="c 7 -#000000 B 40 1538.21 673.61 1544.64 670.27 1552.47 666.79 1560 665 1593.74 656.98 1837.37 658.82 1872 657 1966.84 652 1990.5 \
649.45 2085 640 2188.78 629.63 2222.04 652.87 2318 612 2347.06 599.62 2359.47 595.54 2373 567 2374.71 563.39 2374.73 561.61 2373 \
558 2370.53 552.87 2365.47 555.13 2363 550 2359.15 541.99 2357.81 537.22 2363 530 2419.92 450.79 2491.34 516.28 2571 460 2600.99 \
438.81 2596.14 421.07 2622 395 2661.64 355.03 2721 372.29 2721 316 2721 316 2721 316 2721 134 2721 122.59 2721 109.75 2721 99.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2723.45 99.82 2721 92.82 2718.55 99.82 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2665 380.6 0 40 9 -reference ",
		label=reference,
		lp="2665,382.5",
		pos="e,2721,91.304 1538.2,673.61 1544.6,670.27 1552.5,666.79 1560,665 1593.7,656.98 1837.4,658.82 1872,657 1966.8,652 1990.5,649.45 2085,\
640 2188.8,629.63 2222,652.87 2318,612 2347.1,599.62 2359.5,595.54 2373,567 2374.7,563.39 2374.7,561.61 2373,558 2370.5,552.87 2365.5,\
555.13 2363,550 2359.1,541.99 2357.8,537.22 2363,530 2419.9,450.79 2491.3,516.28 2571,460 2601,438.81 2596.1,421.07 2622,395 2661.6,\
355.03 2721,372.29 2721,316 2721,316 2721,316 2721,134 2721,122.59 2721,109.75 2721,99.808"];
	combine	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1219.5 575.5 1219.5 594.5 1374.5 594.5 1374.5 575.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1297 582.5 0 139 26 -CombineVariants (GATK 3.6) ",
		height=0.27778,
		label="CombineVariants (GATK 3.6)",
		pos="1297,585",
		rects="1219.5,575.5,1374.5,594.5",
		width=2.1528];
	reference -> combine	[_draw_="c 7 -#000000 B 13 1538.58 673.53 1544.94 670.26 1552.63 666.86 1560 665 1576.62 660.82 1702.2 669.43 1714 657 1716.75 654.1 1716.61 \
651.03 1714 648 1703.15 635.41 1497.76 609.48 1379.36 595.47 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1379.73 593.05 1372.49 594.66 1379.16 597.91 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1709 628.1 0 40 9 -reference ",
		label=reference,
		lp="1709,630",
		pos="e,1371,594.48 1538.6,673.53 1544.9,670.26 1552.6,666.86 1560,665 1576.6,660.82 1702.2,669.43 1714,657 1716.8,654.1 1716.6,651.03 \
1714,648 1703.1,635.41 1497.8,609.48 1379.4,595.47"];
	reference -> strelka	[_draw_="c 7 -#000000 B 16 1507.4 673.57 1501.63 670.73 1495.08 667.63 1489 665 1479.83 661.04 1477.22 660.83 1468 657 1459 653.26 1457.5 \
650.19 1448 648 1418.75 641.27 1207.99 641.06 1178 640 1122.8 638.05 1059.8 635.42 1015.58 633.5 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1015.88 631.06 1008.78 633.21 1015.67 635.96 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1488 650.6 0 40 9 -reference ",
		label=reference,
		lp="1488,652.5",
		pos="e,1007.3,633.14 1507.4,673.57 1501.6,670.73 1495.1,667.63 1489,665 1479.8,661.04 1477.2,660.83 1468,657 1459,653.26 1457.5,650.19 \
1448,648 1418.8,641.27 1208,641.06 1178,640 1122.8,638.05 1059.8,635.42 1015.6,633.5"];
	reference -> mutect	[_draw_="c 7 -#000000 B 10 1543.05 673.57 1555.77 666.83 1568.71 657.04 1560 648 1551.71 639.39 1356.93 640.78 1345 640 1338.83 639.6 1332.45 \
639.12 1326.04 638.61 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1326.61 636.19 1319.43 638.06 1326.2 641.08 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1582 650.6 0 40 9 -reference ",
		label=reference,
		lp="1582,652.5",
		pos="e,1317.9,637.93 1543.1,673.57 1555.8,666.83 1568.7,657.04 1560,648 1551.7,639.39 1356.9,640.78 1345,640 1338.8,639.6 1332.4,639.12 \
1326,638.61"];
	reference -> normal_bam_readcount	[_draw_="c 7 -#000000 B 28 1538.2 673.57 1544.62 670.22 1552.46 666.75 1560 665 1575.72 661.36 2128.26 666.91 2141 657 2150.45 649.66 2148 \
642.97 2148 631 2148 631 2148 631 2148 561.5 2148 547.44 2142.5 541.2 2151 530 2167.84 507.81 2241.56 493.78 2268 485 2306.99 472.06 \
2331.6 492.3 2357 460 2367.17 447.07 2368.69 435.5 2358 423 2357.78 422.74 2336.66 419.39 2313.15 415.73 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2313.55 413.32 2306.26 414.66 2312.8 418.16 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2183.5 538.1 0 65 15 -reference_fasta ",
		label=reference_fasta,
		lp="2183.5,540",
		pos="e,2304.8,414.43 1538.2,673.57 1544.6,670.22 1552.5,666.75 1560,665 1575.7,661.36 2128.3,666.91 2141,657 2150.4,649.66 2148,642.97 \
2148,631 2148,631 2148,631 2148,561.5 2148,547.44 2142.5,541.2 2151,530 2167.8,507.81 2241.6,493.78 2268,485 2307,472.06 2331.6,\
492.3 2357,460 2367.2,447.07 2368.7,435.5 2358,423 2357.8,422.74 2336.7,419.39 2313.1,415.73"];
	reference -> annotate_variants	[_draw_="c 7 -#000000 B 19 1538.22 673.67 1544.65 670.34 1552.48 666.85 1560 665 1580.3 659.99 1732.58 671.12 1748 657 1780.73 627.03 1730.11 \
589.87 1761 558 1776.36 542.15 1793.17 564.27 1810 550 1840.23 524.38 1810.74 487.91 1845 468 1849 465.68 1863.96 463.04 1882.21 \
460.54 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1882.1 463.03 1888.71 459.68 1881.45 458.17 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1781 560.6 0 40 9 -reference ",
		label=reference,
		lp="1781,562.5",
		pos="e,1890.2,459.48 1538.2,673.67 1544.7,670.34 1552.5,666.85 1560,665 1580.3,659.99 1732.6,671.12 1748,657 1780.7,627.03 1730.1,589.87 \
1761,558 1776.4,542.15 1793.2,564.27 1810,550 1840.2,524.38 1810.7,487.91 1845,468 1849,465.68 1864,463.04 1882.2,460.54"];
	pindel_insert_size -> pindel	[_draw_="c 7 -#000000 B 13 1459.41 673.56 1469.33 670.33 1481.1 666.96 1492 665 1506.46 662.4 1613.93 667.7 1624 657 1626.74 654.09 1626.71 \
650.94 1624 648 1614.8 638.02 1545.65 633.9 1489.18 632.2 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1489.53 629.76 1482.46 632.01 1489.39 634.65 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1648 650.6 0 44 11 -insert_size ",
		label=insert_size,
		lp="1648,652.5",
		pos="e,1480.9,631.96 1459.4,673.56 1469.3,670.33 1481.1,666.96 1492,665 1506.5,662.4 1613.9,667.7 1624,657 1626.7,654.09 1626.7,650.94 \
1624,648 1614.8,638.02 1545.7,633.9 1489.2,632.2"];
	vep_cache_dir -> annotate_variants	[_draw_="c 7 -#000000 B 13 2229.83 673.8 2227.14 651.4 2223.16 588.79 2257 558 2268.74 547.32 2317.42 561.84 2328 550 2333.92 543.37 2333.55 \
536.94 2328 530 2295.62 489.54 2159.59 468.59 2064.87 458.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2065.13 456.26 2057.91 457.99 2064.63 461.14 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2277 560.6 0 40 9 -cache_dir ",
		label=cache_dir,
		lp="2277,562.5",
		pos="e,2056.4,457.83 2229.8,673.8 2227.1,651.4 2223.2,588.79 2257,558 2268.7,547.32 2317.4,561.84 2328,550 2333.9,543.37 2333.6,536.94 \
2328,530 2295.6,489.54 2159.6,468.59 2064.9,458.7"];
	tumor_bam -> filter_vcf	[_draw_="c 7 -#000000 B 40 1359.3 673.59 1366.65 670.24 1375.55 666.76 1384 665 1430.34 655.32 1762.73 659.61 1810 657 1892.44 652.44 1913.03 \
649.93 1995 640 2077.99 629.95 2112.31 659.65 2181 612 2203.56 596.35 2192.39 578.18 2211 558 2215.35 553.29 2218.42 554.48 2223 \
550 2230.76 542.42 2228.39 536.6 2237 530 2262.89 510.16 2275.58 516.78 2306 505 2354.87 486.07 2378.97 498.06 2415 460 2421.47 \
453.16 2415.56 446.87 2422 440 2441.48 419.23 2456.01 428.65 2481 415 2500.37 404.42 2505.71 401.89 2522 387 2562.84 349.67 2555.86 \
275.39 2550.3 242.42 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2552.75 242.21 2549.08 235.77 2547.93 243.1 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2445 448.1 0 46 9 -tumor_bam ",
		label=tumor_bam,
		lp="2445,450",
		pos="e,2548.8,234.28 1359.3,673.59 1366.6,670.24 1375.6,666.76 1384,665 1430.3,655.32 1762.7,659.61 1810,657 1892.4,652.44 1913,649.93 \
1995,640 2078,629.95 2112.3,659.65 2181,612 2203.6,596.35 2192.4,578.18 2211,558 2215.3,553.29 2218.4,554.48 2223,550 2230.8,542.42 \
2228.4,536.6 2237,530 2262.9,510.16 2275.6,516.78 2306,505 2354.9,486.07 2379,498.06 2415,460 2421.5,453.16 2415.6,446.87 2422,440 \
2441.5,419.23 2456,428.65 2481,415 2500.4,404.42 2505.7,401.89 2522,387 2562.8,349.67 2555.9,275.39 2550.3,242.42"];
	tumor_bam -> varscan	[_draw_="c 7 -#000000 B 13 1327.11 673.59 1319.95 670.24 1311.26 666.77 1303 665 1259.31 655.65 943.24 671.55 901 657 894.7 654.83 895.26 \
650.29 889 648 847.85 632.94 729.45 630.46 656.68 630.44 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 656.99 627.99 649.99 630.45 656.99 632.89 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 924 650.6 0 46 9 -tumor_bam ",
		label=tumor_bam,
		lp="924,652.5",
		pos="e,648.48,630.45 1327.1,673.59 1320,670.24 1311.3,666.77 1303,665 1259.3,655.65 943.24,671.55 901,657 894.7,654.83 895.26,650.29 \
889,648 847.85,632.94 729.45,630.46 656.68,630.44"];
	tumor_bam -> tumor_bam_readcount	[_draw_="c 7 -#000000 B 34 1359.72 673.52 1366.99 670.24 1375.73 666.84 1384 665 1460.43 647.97 1484.22 676.72 1560 657 1568.66 654.75 1569.36 \
650.32 1578 648 1592.19 644.19 1699.45 650.23 1710 640 1745.23 605.81 1706.78 577.28 1720 530 1726 508.56 1729.34 503.31 1742 485 \
1747.9 476.47 1748.65 472.49 1758 468 1798.6 448.52 1819.91 482.36 1859 460 1868.42 454.61 1866.15 448.42 1873 440 1879.55 431.95 \
1880.94 429.53 1889 423 1890.66 421.65 1892.44 420.34 1894.27 419.07 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1895.57 421.14 1900.11 415.28 1892.91 417.03 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1729.5 538.1 0 19 3 -bam ",
		label=bam,
		lp="1729.5,540",
		pos="e,1901.4,414.46 1359.7,673.52 1367,670.24 1375.7,666.84 1384,665 1460.4,647.97 1484.2,676.72 1560,657 1568.7,654.75 1569.4,650.32 \
1578,648 1592.2,644.19 1699.5,650.23 1710,640 1745.2,605.81 1706.8,577.28 1720,530 1726,508.56 1729.3,503.31 1742,485 1747.9,476.47 \
1748.6,472.49 1758,468 1798.6,448.52 1819.9,482.36 1859,460 1868.4,454.61 1866.2,448.42 1873,440 1879.5,431.95 1880.9,429.53 1889,\
423 1890.7,421.65 1892.4,420.34 1894.3,419.07"];
	tumor_bam -> pindel	[_draw_="c 7 -#000000 B 10 1359.74 673.59 1367.01 670.33 1375.74 666.92 1384 665 1397.56 661.85 1499.48 667.15 1509 657 1520.82 644.39 1508.5 \
637.69 1489.26 634.19 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1489.74 631.79 1482.45 633.15 1489 636.63 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1536 650.6 0 46 9 -tumor_bam ",
		label=tumor_bam,
		lp="1536,652.5",
		pos="e,1481,632.92 1359.7,673.59 1367,670.33 1375.7,666.92 1384,665 1397.6,661.85 1499.5,667.15 1509,657 1520.8,644.39 1508.5,637.69 \
1489.3,634.19"];
	tumor_bam -> strelka	[_draw_="c 7 -#000000 B 13 1326.25 673.61 1319.23 670.43 1310.88 667.08 1303 665 1272.72 657.02 1260.79 671.43 1233 657 1228.25 654.53 1229.81 \
650.35 1225 648 1206.73 639.08 1088.2 634.4 1015.67 632.34 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1016.08 629.9 1009.01 632.15 1015.94 634.79 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1256 650.6 0 46 9 -tumor_bam ",
		label=tumor_bam,
		lp="1256,652.5",
		pos="e,1007.5,632.11 1326.3,673.61 1319.2,670.43 1310.9,667.08 1303,665 1272.7,657.02 1260.8,671.43 1233,657 1228.3,654.53 1229.8,650.35 \
1225,648 1206.7,639.08 1088.2,634.4 1015.7,632.34"];
	tumor_bam -> mutect	[_draw_="c 7 -#000000 B 10 1363.65 673.56 1379.51 666.99 1398.89 658.7 1400 657 1402.19 653.65 1402.67 650.98 1400 648 1398.63 646.46 1362.57 \
642.37 1326.04 638.59 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1326.47 636.17 1319.26 637.89 1325.97 641.04 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1424 650.6 0 46 9 -tumor_bam ",
		label=tumor_bam,
		lp="1424,652.5",
		pos="e,1317.8,637.74 1363.7,673.56 1379.5,666.99 1398.9,658.7 1400,657 1402.2,653.65 1402.7,650.98 1400,648 1398.6,646.46 1362.6,642.37 \
1326,638.59"];
	varscan_min_coverage -> varscan	[_draw_="c 7 -#000000 B 7 332.4 673.57 340.13 665.43 353.04 653.53 367 648 396.89 636.16 479.8 632.48 537.44 631.39 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 537.28 633.84 544.24 631.27 537.2 628.94 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 396 650.6 0 58 12 -min_coverage ",
		label=min_coverage,
		lp="396,652.5",
		pos="e,545.75,631.25 332.4,673.57 340.13,665.43 353.04,653.53 367,648 396.89,636.16 479.8,632.48 537.44,631.39"];
	vep_ensembl_version -> annotate_variants	[_draw_="c 7 -#000000 B 19 2336.58 673.53 2329.19 654.75 2311.93 608 2306 567 2305.43 563.04 2303.59 561.19 2306 558 2313.79 547.67 2326.21 \
560.33 2334 550 2344.9 535.55 2331.56 523.75 2317 513 2295.56 497.18 2289.19 493.67 2264 485 2199.73 462.88 2123.39 454.54 2064.6 \
451.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2065.04 449.21 2057.94 451.34 2064.82 454.11 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2341 560.6 0 70 15 -ensembl_version ",
		label=ensembl_version,
		lp="2341,562.5",
		pos="e,2056.4,451.27 2336.6,673.53 2329.2,654.75 2311.9,608 2306,567 2305.4,563.04 2303.6,561.19 2306,558 2313.8,547.67 2326.2,560.33 \
2334,550 2344.9,535.55 2331.6,523.75 2317,513 2295.6,497.18 2289.2,493.67 2264,485 2199.7,462.88 2123.4,454.54 2064.6,451.65"];
	interval_list -> varscan	[_draw_="c 7 -#000000 B 10 1040.69 673.59 1033.35 670.24 1024.45 666.77 1016 665 1004.71 662.64 609.68 664.59 601 657 598.25 654.6 596.83 \
651.16 596.18 647.58 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 598.64 647.72 595.84 640.85 593.74 647.96 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 624.5 650.6 0 47 13 -interval_list ",
		label=interval_list,
		lp="624.5,652.5",
		pos="e,595.77,639.34 1040.7,673.59 1033.4,670.24 1024.4,666.77 1016,665 1004.7,662.64 609.68,664.59 601,657 598.25,654.6 596.83,651.16 \
596.18,647.58"];
	interval_list -> pindel	[_draw_="c 7 -#000000 B 10 1054.07 673.51 1051.99 665.79 1050.59 654.61 1057 648 1067.18 637.51 1305.41 640.92 1320 640 1326.15 639.61 1332.53 \
639.14 1338.93 638.63 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1338.75 641.1 1345.52 638.08 1338.34 636.22 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1080.5 650.6 0 47 13 -interval_list ",
		label=interval_list,
		lp="1080.5,652.5",
		pos="e,1347,637.95 1054.1,673.51 1052,665.79 1050.6,654.61 1057,648 1067.2,637.51 1305.4,640.92 1320,640 1326.2,639.61 1332.5,639.14 \
1338.9,638.63"];
	interval_list -> strelka	[_draw_="c 7 -#000000 B 13 1040.28 673.52 1033.01 670.25 1024.27 666.85 1016 665 997.44 660.85 858.13 670.76 845 657 842.24 654.11 842.39 \
651.03 845 648 852.75 639.01 877.78 634.7 902.42 632.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 902.43 635.12 909.23 632.17 902.07 630.24 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 868.5 650.6 0 47 13 -interval_list ",
		label=interval_list,
		lp="868.5,652.5",
		pos="e,910.74,632.06 1040.3,673.52 1033,670.25 1024.3,666.85 1016,665 997.44,660.85 858.13,670.76 845,657 842.24,654.11 842.39,651.03 \
845,648 852.75,639.01 877.78,634.7 902.42,632.67"];
	interval_list -> mutect	[_draw_="c 7 -#000000 B 10 1036.95 673.58 1023.13 667.58 1006.92 660.05 1005 657 1002.87 653.61 1002.27 650.93 1005 648 1016.3 635.88 1104.52 \
632.22 1171.66 631.21 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1171.67 633.66 1178.64 631.12 1171.61 628.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1028.5 650.6 0 47 13 -interval_list ",
		label=interval_list,
		lp="1028.5,652.5",
		pos="e,1180.2,631.09 1037,673.58 1023.1,667.58 1006.9,660.05 1005,657 1002.9,653.61 1002.3,650.93 1005,648 1016.3,635.88 1104.5,632.22 \
1171.7,631.21"];
	strelka_cpu_reserved -> strelka	[_draw_="c 7 -#000000 B 13 800.17 673.55 789.44 670.65 777.22 667.51 766 665 756.3 662.83 728.37 664.63 722 657 719.44 653.93 719.27 650.93 \
722 648 734.04 635.06 836.22 631.83 902.43 631.1 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 902.22 633.56 909.2 631.04 902.18 628.66 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 749.5 650.6 0 55 12 -cpu_reserved ",
		label=cpu_reserved,
		lp="749.5,652.5",
		pos="e,910.71,631.02 800.17,673.55 789.44,670.65 777.22,667.51 766,665 756.3,662.83 728.37,664.63 722,657 719.44,653.93 719.27,650.93 \
722,648 734.04,635.06 836.22,631.83 902.43,631.1"];
	vep_plugins -> annotate_variants	[_draw_="c 7 -#000000 B 22 1614.17 673.61 1621.63 670.34 1630.57 666.93 1639 665 1665.27 658.98 1737.59 671.96 1760 657 1800.83 629.74 1775.92 \
594.28 1809 558 1813.57 552.99 1817.88 555.39 1822 550 1840.26 526.07 1825.29 510.67 1841 485 1846.74 475.61 1849.11 472.83 1859 \
468 1864.43 465.35 1873.73 462.99 1884.71 460.93 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1885.01 463.36 1891.49 459.74 1884.17 458.53 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1824.5 560.6 0 31 7 -plugins ",
		label=plugins,
		lp="1824.5,562.5",
		pos="e,1893,459.48 1614.2,673.61 1621.6,670.34 1630.6,666.93 1639,665 1665.3,658.98 1737.6,671.96 1760,657 1800.8,629.74 1775.9,594.28 \
1809,558 1813.6,552.99 1817.9,555.39 1822,550 1840.3,526.07 1825.3,510.67 1841,485 1846.7,475.61 1849.1,472.83 1859,468 1864.4,465.35 \
1873.7,462.99 1884.7,460.93"];
	readcount_minimum_mapping_quality -> tumor_bam_readcount	[_draw_="c 7 -#000000 B 16 2486.75 673.51 2474.99 668.75 2460.14 662.66 2447 657 2357.85 618.59 2326.65 623.89 2248 567 2229.9 553.91 2233.63 \
540.65 2214 530 2193.35 518.8 1812.17 477.93 1797 460 1776.13 435.33 1814.95 421.44 1853.88 413.94 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1854.22 416.37 1860.67 412.71 1853.35 411.55 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2275.5 538.1 0 87 19 -min_mapping_quality ",
		label=min_mapping_quality,
		lp="2275.5,540",
		pos="e,1862.2,412.44 2486.7,673.51 2475,668.75 2460.1,662.66 2447,657 2357.9,618.59 2326.7,623.89 2248,567 2229.9,553.91 2233.6,540.65 \
2214,530 2193.4,518.8 1812.2,477.93 1797,460 1776.1,435.33 1815,421.44 1853.9,413.94"];
	readcount_minimum_mapping_quality -> normal_bam_readcount	[_draw_="c 7 -#000000 B 16 2485.75 673.56 2476.57 669.43 2466.19 663.85 2458 657 2415.85 621.77 2425.15 594.39 2384 558 2378.63 553.25 2375.83 \
554.17 2370 550 2363.85 545.6 2272.17 466.3 2268 460 2260.42 448.56 2255.77 433.64 2253.1 422.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2255.54 422.09 2251.68 415.76 2250.75 423.11 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2413.5 538.1 0 87 19 -min_mapping_quality ",
		label=min_mapping_quality,
		lp="2413.5,540",
		pos="e,2251.4,414.28 2485.8,673.56 2476.6,669.43 2466.2,663.85 2458,657 2415.9,621.77 2425.2,594.39 2384,558 2378.6,553.25 2375.8,554.17 \
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	variants_to_table_fields -> variants_to_table	[_draw_="c 7 -#000000 B 13 3333.86 673.52 3322.47 670.74 3309.7 667.68 3298 665 3262.99 656.98 3140 666.91 3140 631 3140 631 3140 631 3140 \
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3151.5 380.6 0 23 6 -fields ",
		label=fields,
		lp="3151.5,382.5",
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100.06 2920.6,88.536 2799.3,84.757"];
	synonyms_file -> annotate_variants	[_draw_="c 7 -#000000 B 13 1702.24 673.62 1710.69 670.44 1720.68 667.09 1730 665 1782.01 653.33 1845 684.3 1845 631 1845 631 1845 631 1845 \
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		label=synonyms_file,
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479.08 1877.2,468.23 1909,461.16"];
	filter_somatic_llr_threshold -> filter_vcf	[_draw_="c 7 -#000000 B 22 3188.22 673.5 3174.78 670.46 3159.24 667.24 3145 665 3106.4 658.94 2795 670.07 2795 631 2795 631 2795 631 2795 \
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		label=filter_somatic_llr_threshold,
		lp="2848.5,450",
		pos="e,2611,228.95 3188.2,673.5 3174.8,670.46 3159.2,667.24 3145,665 3106.4,658.94 2795,670.07 2795,631 2795,631 2795,631 2795,471.5 \
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2619.2,229.98"];
	variants_to_table_genotype_fields -> variants_to_table	[_draw_="c 7 -#000000 B 10 3485.37 673.53 3432.33 663.03 3352 644.85 3352 631 3352 631 3352 631 3352 134 3352 106.59 2968.76 90.93 2799.62 \
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3385 380.6 0 66 15 -genotype_fields ",
		label=genotype_fields,
		lp="3385,382.5",
		pos="e,2791.2,85.077 3485.4,673.53 3432.3,663.03 3352,644.85 3352,631 3352,631 3352,631 3352,134 3352,106.59 2968.8,90.928 2799.6,85.35"];
	filter_mapq0_threshold -> filter_vcf	[_draw_="c 7 -#000000 B 31 2839.47 673.52 2827.4 670.29 2813.12 666.92 2800 665 2780.85 662.19 2641.09 669.12 2626 657 2616.67 649.5 2619 \
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2474.6 231.48 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2573 448.1 0 94 22 -filter_mapq0_threshold ",
		label=filter_mapq0_threshold,
		lp="2573,450",
		pos="e,2483,230.78 2839.5,673.52 2827.4,670.29 2813.1,666.92 2800,665 2780.9,662.19 2641.1,669.12 2626,657 2616.7,649.5 2619,642.97 2619,\
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	annotate_coding_only -> annotate_variants	[_draw_="c 7 -#000000 B 10 1818.33 673.59 1853.66 661.91 1912 641.1 1912 631 1912 631 1912 631 1912 494 1912 479.85 1923.27 469.82 1935.88 \
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1936.5 560.6 0 49 11 -coding_only ",
		label=coding_only,
		lp="1936.5,562.5",
		pos="e,1943.4,459.4 1818.3,673.59 1853.7,661.91 1912,641.1 1912,631 1912,631 1912,631 1912,494 1912,479.85 1923.3,469.82 1935.9,463.03"];
	readcount_minimum_base_quality -> tumor_bam_readcount	[_draw_="c 7 -#000000 B 19 2657.46 673.54 2631.62 668.96 2599.54 663.02 2571 657 2522.27 646.72 2462 680.8 2462 631 2462 631 2462 631 2462 \
561.5 2462 547.06 2463.69 540.72 2454 530 2441.96 516.68 2166.61 426.52 2149 423 2092.59 411.71 2027.12 407.73 1980.15 406.41 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2497.5 538.1 0 71 16 -min_base_quality ",
		label=min_base_quality,
		lp="2497.5,540",
		pos="e,1971.9,406.2 2657.5,673.54 2631.6,668.96 2599.5,663.02 2571,657 2522.3,646.72 2462,680.8 2462,631 2462,631 2462,631 2462,561.5 \
2462,547.06 2463.7,540.72 2454,530 2442,516.68 2166.6,426.52 2149,423 2092.6,411.71 2027.1,407.73 1980.1,406.41"];
	readcount_minimum_base_quality -> normal_bam_readcount	[_draw_="c 7 -#000000 B 19 2665.97 673.51 2616.81 662.75 2541 644.04 2541 631 2541 631 2541 631 2541 561.5 2541 495.28 2488.49 486.8 2425 \
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2575.5 538.1 0 71 16 -min_base_quality ",
		label=min_base_quality,
		lp="2575.5,540",
		pos="e,2259.2,414.42 2666,673.51 2616.8,662.75 2541,644.04 2541,631 2541,631 2541,631 2541,561.5 2541,495.28 2488.5,486.8 2425,468 2409.4,\
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	varscan_p_value -> varscan	[_draw_="c 7 -#000000 B 7 434.96 673.58 428.81 666.12 422.41 655.29 429 648 436.33 639.89 492.19 635.46 537.52 633.17 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 537.46 635.63 544.33 632.84 537.22 630.73 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 445 650.6 0 32 7 -p_value ",
		label=p_value,
		lp="445,652.5",
		pos="e,545.84,632.77 434.96,673.58 428.81,666.12 422.41,655.29 429,648 436.33,639.89 492.19,635.46 537.52,633.17"];
	vep_ensembl_species -> annotate_variants	[_draw_="c 7 -#000000 B 10 1936.93 673.59 1951.43 665.05 1970 650.34 1970 631 1970 631 1970 631 1970 494 1970 485.31 1970 475.63 1970 467.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1972.45 467.76 1970 460.76 1967.55 467.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2005.5 560.6 0 71 15 -ensembl_species ",
		label=ensembl_species,
		lp="2005.5,562.5",
		pos="e,1970,459.24 1936.9,673.59 1951.4,665.05 1970,650.34 1970,631 1970,631 1970,631 1970,494 1970,485.31 1970,475.63 1970,467.65"];
	add_vep_fields_to_table	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2309.5 0.5 2309.5 19.5 2466.5 19.5 2466.5 0.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2388 7.5 0 141 28 -add VEP annotation to report ",
		height=0.27778,
		label="add VEP annotation to report",
		pos="2388,10",
		rects="2309.5,0.5,2466.5,19.5",
		width=2.1806];
	vep_to_table_fields -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 10 88.59 673.5 102.8 664.9 121 650.15 121 631 121 631 121 631 121 81 121 25.41 1885.97 13.42 2301.25 11.37 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 142 358.1 0 42 10 -vep_fields ",
		label=vep_fields,
		lp="142,360",
		pos="e,2309.6,11.329 88.589,673.5 102.8,664.9 121,650.15 121,631 121,631 121,631 121,81 121,25.41 1886,13.422 2301.3,11.37"];
	vep_ensembl_assembly -> annotate_variants	[_draw_="c 7 -#000000 B 10 2052.21 673.71 2051.32 663.62 2050 646.08 2050 631 2050 631 2050 631 2050 494 2050 478.69 2038.5 468.81 2024.21 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2025.36 460.26 2017.94 459.98 2023.56 464.82 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2089.5 560.6 0 79 16 -ensembl_assembly ",
		label=ensembl_assembly,
		lp="2089.5,562.5",
		pos="e,2016.5,459.42 2052.2,673.71 2051.3,663.62 2050,646.08 2050,631 2050,631 2050,631 2050,494 2050,478.69 2038.5,468.81 2024.2,462.44"];
	mutect_scatter_count -> mutect	[_draw_="c 7 -#000000 B 10 1272.7 673.54 1283.27 670.76 1295.13 667.7 1306 665 1321.07 661.26 1330.36 669.17 1340 657 1349.12 645.48 1340.77 \
638.84 1326.04 635.07 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1326.65 632.69 1319.29 633.66 1325.64 637.49 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1371 650.6 0 56 13 -scatter_count ",
		label=scatter_count,
		lp="1371,652.5",
		pos="e,1317.8,633.35 1272.7,673.54 1283.3,670.76 1295.1,667.7 1306,665 1321.1,661.26 1330.4,669.17 1340,657 1349.1,645.48 1340.8,638.84 \
1326,635.07"];
	strelka_exome_mode -> strelka	[_draw_="c 7 -#000000 B 13 927.84 673.58 916.55 670.4 903.25 667.05 891 665 878.91 662.97 789.35 665.97 781 657 778.28 654.07 778.31 650.96 \
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 808.5 650.6 0 55 10 -exome_mode ",
		label=exome_mode,
		lp="808.5,652.5",
		pos="e,910.78,632.33 927.84,673.58 916.55,670.4 903.25,667.05 891,665 878.91,662.97 789.35,665.97 781,657 778.28,654.07 778.31,650.96 \
781,648 789.14,639.04 853.44,634.69 902.44,632.66"];
	varscan_min_var_freq -> varscan	[_draw_="c 7 -#000000 B 7 214.31 673.62 234.97 665.51 268.13 653.63 298 648 342.28 639.65 463.65 634.81 537.44 632.56 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 537.31 635.02 544.24 632.36 537.16 630.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 324 650.6 0 52 12 -min_var_freq ",
		label=min_var_freq,
		lp="324,652.5",
		pos="e,545.75,632.31 214.31,673.62 234.97,665.51 268.13,653.63 298,648 342.28,639.65 463.65,634.81 537.44,632.56"];
	varscan_strand_filter -> varscan	[_draw_="c 7 -#000000 B 10 524.65 673.54 498.04 666.35 464.12 657.16 464 657 461.57 653.82 461.36 651 464 648 473.81 636.85 506.89 632.59 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 537.34 633.59 544.24 630.86 537.14 628.69 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 488.5 650.6 0 49 13 -strand_filter ",
		label=strand_filter,
		lp="488.5,652.5",
		pos="e,545.75,630.8 524.65,673.54 498.04,666.35 464.12,657.16 464,657 461.57,653.82 461.36,651 464,648 473.81,636.85 506.89,632.59 537.59,\
631.13"];
	annotated_filter_bgzip	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2518.5 170.5 2518.5 189.5 2583.5 189.5 2583.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2551 177.5 0 49 9 -bgzip VCF ",
		height=0.27778,
		label="bgzip VCF",
		pos="2551,180",
		rects="2518.5,170.5,2583.5,189.5",
		width=0.90278];
	filter_vcf -> annotated_filter_bgzip	[_draw_="c 7 -#000000 B 4 2547.77 215.71 2548.25 210.59 2548.87 203.85 2549.45 197.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2551.88 197.97 2550.09 190.77 2547 197.52 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2555.5 200.6 0 13 4 -file ",
		label=file,
		lp="2555.5,202.5",
		pos="e,2550.2,189.27 2547.8,215.71 2548.2,210.59 2548.9,203.85 2549.4,197.67"];
	annotated_filter_index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2522 125.5 2522 144.5 2584 144.5 2584 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2553 132.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="2553,135",
		rects="2522,125.5,2584,144.5",
		width=0.86111];
	annotated_filter_bgzip -> annotated_filter_index	[_draw_="c 7 -#000000 B 4 2551.39 170.71 2551.62 165.59 2551.94 158.85 2552.22 152.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2554.67 152.88 2552.55 145.78 2549.77 152.66 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2558.5 155.6 0 13 3 -vcf ",
		label=vcf,
		lp="2558.5,157.5",
		pos="e,2552.6,144.27 2551.4,170.71 2551.6,165.59 2551.9,158.85 2552.2,152.67"];
	varscan -> varscan_unfiltered_vcf	[_draw_="c 7 -#000000 B 10 597 620.76 597 612.1 597 598.09 597 586 597 586 597 586 597 134 597 122.59 597 109.75 597 99.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 599.45 99.82 597 92.82 594.55 99.82 ",
		pos="e,597,91.304 597,620.76 597,612.1 597,598.09 597,586 597,586 597,586 597,134 597,122.59 597,109.75 597,99.808"];
	varscan -> varscan_filtered_vcf	[_draw_="c 7 -#000000 B 10 631.8 620.61 648.53 614.29 665 603.6 665 586 665 586 665 586 665 134 665 116.81 679.57 103.97 693.98 95.47 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 695.11 97.64 700.09 92.14 692.77 93.34 ",
		pos="e,701.42,91.419 631.8,620.61 648.53,614.29 665,603.6 665,586 665,586 665,586 665,134 665,116.81 679.57,103.97 693.98,95.468"];
	varscan -> combine	[_draw_="c 7 -#000000 B 4 648.47 625.84 767.78 618.51 1064.2 600.3 1211.34 591.26 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1211.18 593.73 1218.02 590.85 1210.88 588.84 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1033.5 605.6 0 49 11 -varscan_vcf ",
		label=varscan_vcf,
		lp="1033.5,607.5",
		pos="e,1219.5,590.76 648.47,625.84 767.78,618.51 1064.2,600.3 1211.3,591.26"];
	tumor_bam_readcount -> tumor_indel_bam_readcount_tsv	[_draw_="c 7 -#000000 B 22 1907.02 395.75 1904.42 393.18 1901.84 390.18 1900 387 1894.01 376.64 1893 372.97 1893 361 1893 361 1893 361 1893 \
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2044.1 95.57 2057.94 93 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2058.01 95.48 2064.43 91.78 2057.1 90.67 ",
		pos="e,2065.9,91.495 1907,395.75 1904.4,393.18 1901.8,390.18 1900,387 1894,376.64 1893,372.97 1893,361 1893,361 1893,361 1893,246.5 1893,\
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2057.9,93.001"];
	tumor_bam_readcount -> tumor_snv_bam_readcount_tsv	[_draw_="c 7 -#000000 B 22 1912.89 395.66 1909.08 387.16 1904 373.48 1904 361 1904 361 1904 361 1904 269 1904 238.69 1923 233.81 1923 203.5 \
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2238.53 93.09 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2238.65 95.56 2245.04 91.79 2237.69 90.76 ",
		pos="e,2246.5,91.491 1912.9,395.66 1909.1,387.16 1904,373.48 1904,361 1904,361 1904,361 1904,269 1904,238.69 1923,233.81 1923,203.5 1923,\
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93.087"];
	add_tumor_bam_readcount_to_vcf	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 2015 350.5 2015 369.5 2259 369.5 2259 350.5 ",
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		fillcolor="#F3CEA1",
		height=0.27778,
		label="Add snv and indel bam-readcount files to a vcf",
		pos="2137,360",
		rects="2015,350.5,2259,369.5",
		width=3.3889];
	tumor_bam_readcount -> add_tumor_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 1915.47 395.54 1914.95 389.78 1915.42 382.41 1920 378 1920.96 377.07 1963.5 373.64 2010.67 370.1 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1969 380.6 0 98 21 -snv_bam_readcount_tsv ",
		label=snv_bam_readcount_tsv,
		lp="1969,382.5",
		pos="e,2018.9,369.49 1915.5,395.54 1915,389.78 1915.4,382.41 1920,378 1921,377.07 1963.5,373.64 2010.7,370.1"];
	tumor_bam_readcount -> add_tumor_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 1968.18 395.5 1983.28 392.89 1999.83 389.93 2015 387 2040.19 382.13 2068.19 376.2 2091 371.24 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2110 380.6 0 104 23 -indel_bam_readcount_tsv ",
		label=indel_bam_readcount_tsv,
		lp="2110,382.5",
		pos="e,2099.2,369.45 1968.2,395.5 1983.3,392.89 1999.8,389.93 2015,387 2040.2,382.13 2068.2,376.2 2091,371.24"];
	add_vep_fields_to_table -> final_tsv	[_draw_="c 7 -#000000 B 7 2309.83 13.66 2187.76 18.27 1962.3 28.86 1929 45 1919.42 49.64 1911.3 58.39 1905.51 66.1 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1903.74 64.36 1901.74 71.5 1907.76 67.16 ",
		pos="e,1900.9,72.744 2309.8,13.656 2187.8,18.273 1962.3,28.857 1929,45 1919.4,49.644 1911.3,58.393 1905.5,66.103"];
	pindel -> pindel_filtered_vcf	[_draw_="c 7 -#000000 B 10 1406.8 620.75 1400.38 612.52 1392 599.25 1392 586 1392 586 1392 586 1392 134 1392 114.97 1375.04 102.4 1357.58 \
94.5 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1358.92 92.4 1351.51 91.97 1357.04 96.92 ",
		pos="e,1350.1,91.393 1406.8,620.75 1400.4,612.52 1392,599.25 1392,586 1392,586 1392,586 1392,134 1392,114.97 1375,102.4 1357.6,94.497"];
	pindel -> pindel_unfiltered_vcf	[_draw_="c 7 -#000000 B 10 1420.88 620.69 1427 612.43 1435 599.13 1435 586 1435 586 1435 586 1435 134 1435 122.47 1435.52 109.48 1436.03 \
99.49 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1438.45 99.93 1436.39 92.81 1433.56 99.67 ",
		pos="e,1436.5,91.3 1420.9,620.69 1427,612.43 1435,599.13 1435,586 1435,586 1435,586 1435,134 1435,122.47 1435.5,109.48 1436,99.495"];
	pindel -> combine	[_draw_="c 7 -#000000 B 7 1373.23 620.52 1364.14 618.16 1354.63 615.31 1346 612 1336.5 608.35 1326.5 603.29 1318.02 598.6 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1319.34 596.53 1312.04 595.19 1316.91 600.79 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1367 605.6 0 42 10 -pindel_vcf ",
		label=pindel_vcf,
		lp="1367,607.5",
		pos="e,1310.7,594.44 1373.2,620.52 1364.1,618.16 1354.6,615.31 1346,612 1336.5,608.35 1326.5,603.29 1318,598.6"];
	variants_to_table -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 7 2699.9 72.58 2669.05 60.64 2609.57 39.01 2557 28 2530.45 22.44 2501.16 18.68 2474.53 16.15 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2475.06 13.74 2467.86 15.54 2474.61 18.61 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2599.5 30.6 0 13 3 -tsv ",
		label=tsv,
		lp="2599.5,32.5",
		pos="e,2466.4,15.399 2699.9,72.579 2669,60.636 2609.6,39.008 2557,28 2530.5,22.441 2501.2,18.682 2474.5,16.147"];
	decompose	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1272 530.5 1272 549.5 1376 549.5 1376 530.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1324 537.5 0 88 16 -run vt decompose ",
		height=0.27778,
		label="run vt decompose",
		pos="1324,540",
		rects="1272,530.5,1376,549.5",
		width=1.4444];
	decompose_index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1751 485.5 1751 504.5 1813 504.5 1813 485.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1782 492.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="1782,495",
		rects="1751,485.5,1813,504.5",
		width=0.86111];
	decompose -> decompose_index	[_draw_="c 7 -#000000 B 4 1375.65 534.15 1468.17 525.46 1660.23 507.43 1742.83 499.68 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1742.93 502.13 1749.67 499.03 1742.48 497.25 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1600.5 515.6 0 13 3 -vcf ",
		label=vcf,
		lp="1600.5,517.5",
		pos="e,1751.2,498.89 1375.6,534.15 1468.2,525.46 1660.2,507.43 1742.8,499.68"];
	combine -> decompose	[_draw_="c 7 -#000000 B 4 1302.21 575.71 1305.64 570.24 1310.25 562.9 1314.34 556.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1316.36 557.78 1318.01 550.55 1312.21 555.17 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1318.5 560.6 0 13 3 -vcf ",
		label=vcf,
		lp="1318.5,562.5",
		pos="e,1318.8,549.27 1302.2,575.71 1305.6,570.24 1310.2,562.9 1314.3,556.38"];
	strelka -> strelka_unfiltered_vcf	[_draw_="c 7 -#000000 B 10 959 620.76 959 612.1 959 598.09 959 586 959 586 959 586 959 134 959 122.59 959 109.75 959 99.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 961.45 99.82 959 92.82 956.55 99.82 ",
		pos="e,959,91.304 959,620.76 959,612.1 959,598.09 959,586 959,586 959,586 959,134 959,122.59 959,109.75 959,99.808"];
	strelka -> strelka_filtered_vcf	[_draw_="c 7 -#000000 B 10 926 620.63 909.5 614.25 893 603.5 893 586 893 586 893 586 893 134 893 117.09 878.83 104.12 865.01 95.49 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 866.48 93.52 859.2 92.14 864.03 97.76 ",
		pos="e,857.89,91.379 926,620.63 909.5,614.25 893,603.5 893,586 893,586 893,586 893,134 893,117.09 878.83,104.12 865.01,95.493"];
	strelka -> combine	[_draw_="c 7 -#000000 B 4 1007.43 622.84 1063.53 615.7 1156.63 603.86 1222.09 595.53 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1222.19 597.99 1228.83 594.67 1221.57 593.13 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1180 605.6 0 44 11 -strelka_vcf ",
		label=strelka_vcf,
		lp="1180,607.5",
		pos="e,1230.3,594.48 1007.4,622.84 1063.5,615.7 1156.6,603.86 1222.1,595.53"];
	mutect -> mutect_unfiltered_vcf	[_draw_="c 7 -#000000 B 10 1220.76 620.56 1205.19 613.99 1189 603.04 1189 586 1189 586 1189 586 1189 134 1189 118.91 1153.03 103.84 1123.61 \
94.04 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1124.37 91.72 1116.96 91.89 1122.86 96.38 ",
		pos="e,1115.5,91.424 1220.8,620.56 1205.2,613.99 1189,603.04 1189,586 1189,586 1189,586 1189,134 1189,118.91 1153,103.84 1123.6,94.044"];
	mutect -> mutect_filtered_vcf	[_draw_="c 7 -#000000 B 10 1233.65 620.56 1222.37 613.1 1209 601.09 1209 586 1209 586 1209 586 1209 134 1209 122.47 1208.48 109.48 1207.97 \
99.49 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1210.44 99.67 1207.61 92.81 1205.55 99.93 ",
		pos="e,1207.5,91.3 1233.6,620.56 1222.4,613.1 1209,601.09 1209,586 1209,586 1209,586 1209,134 1209,122.47 1208.5,109.48 1208,99.495"];
	mutect -> combine	[_draw_="c 7 -#000000 B 4 1258.25 620.71 1264.9 614.76 1273.99 606.61 1281.71 599.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1283.07 601.77 1286.65 595.28 1279.8 598.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1299.5 605.6 0 45 10 -mutect_vcf ",
		label=mutect_vcf,
		lp="1299.5,607.5",
		pos="e,1287.8,594.27 1258.3,620.71 1264.9,614.76 1274,606.61 1281.7,599.7"];
	annotated_filter_index -> final_filtered_vcf	[_draw_="c 7 -#000000 B 4 2541.61 125.58 2530.75 117.56 2514.26 105.36 2501.7 96.08 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2503.48 94.36 2496.4 92.16 2500.57 98.3 ",
		pos="e,2495.2,91.265 2541.6,125.58 2530.8,117.56 2514.3,105.36 2501.7,96.079"];
	annotated_filter_index -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 7 2554.81 125.61 2558.03 108.16 2562.64 67.69 2542 45 2531.94 33.94 2502.42 26.13 2471.89 20.8 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2472.49 18.42 2465.18 19.69 2471.68 23.25 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2563.5 80.1 0 13 3 -vcf ",
		label=vcf,
		lp="2563.5,82",
		pos="e,2463.7,19.437 2554.8,125.61 2558,108.16 2562.6,67.686 2542,45 2531.9,33.939 2502.4,26.127 2471.9,20.805"];
	annotated_filter_index -> variants_to_table	[_draw_="c 7 -#000000 B 4 2580.74 125.58 2609.32 116.9 2653.96 103.35 2685.19 93.87 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2685.78 96.25 2691.77 91.87 2684.36 91.56 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2643.5 110.6 0 13 3 -vcf ",
		label=vcf,
		lp="2643.5,112.5",
		pos="e,2693.2,91.434 2580.7,125.58 2609.3,116.9 2654,103.35 2685.2,93.871"];
	decompose_index -> annotate_variants	[_draw_="c 7 -#000000 B 7 1786.32 485.71 1789.93 479.71 1795.65 471.98 1803 468 1803.24 467.87 1839.08 464.22 1877.49 460.33 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1877.49 462.79 1884.21 459.65 1877 457.91 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1809.5 470.6 0 13 3 -vcf ",
		label=vcf,
		lp="1809.5,472.5",
		pos="e,1885.7,459.49 1786.3,485.71 1789.9,479.71 1795.7,471.98 1803,468 1803.2,467.87 1839.1,464.22 1877.5,460.33"];
	add_normal_bam_readcount_to_vcf	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 2148 305.5 2148 324.5 2392 324.5 2392 305.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2270 312.5 0 228 46 -Add snv and indel bam-readcount files to a vcf ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="Add snv and indel bam-readcount files to a vcf",
		pos="2270,315",
		rects="2148,305.5,2392,324.5",
		width=3.3889];
	add_tumor_bam_readcount_to_vcf -> add_normal_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 4 2163.28 350.5 2184.04 343.79 2213.19 334.37 2235.78 327.06 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2236.43 329.43 2242.34 324.94 2234.92 324.77 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2221.5 335.6 0 13 3 -vcf ",
		label=vcf,
		lp="2221.5,337.5",
		pos="e,2243.8,324.48 2163.3,350.5 2184,343.79 2213.2,334.37 2235.8,327.06"];
	index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2239 260.5 2239 279.5 2301 279.5 2301 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2270 267.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="2270,270",
		rects="2239,260.5,2301,279.5",
		width=0.86111];
	index -> final_vcf	[_draw_="c 7 -#000000 B 13 2239.27 268.23 2156.83 265.75 1937 256.31 1937 226 1937 226 1937 226 1937 134 1937 85.85 2322.69 113.17 2369 100 \
2373.16 98.82 2377.4 97.09 2381.39 95.18 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2382.27 97.49 2387.35 92.09 2380.01 93.14 ",
		pos="e,2388.7,91.389 2239.3,268.23 2156.8,265.75 1937,256.31 1937,226 1937,226 1937,226 1937,134 1937,85.852 2322.7,113.17 2369,100 2373.2,\
98.818 2377.4,97.09 2381.4,95.182"];
	index -> filter_vcf	[_draw_="c 7 -#000000 B 4 2300.97 264.19 2345.1 257.34 2427.07 244.62 2484.21 235.75 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2484.42 238.19 2490.96 234.7 2483.67 233.35 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2439.5 245.6 0 13 3 -vcf ",
		label=vcf,
		lp="2439.5,247.5",
		pos="e,2492.5,234.47 2301,264.19 2345.1,257.34 2427.1,244.62 2484.2,235.75"];
	normal_bam_readcount -> normal_indel_bam_readcount_tsv	[_draw_="c 7 -#000000 B 19 2195.02 399.82 2177.67 397.33 2158.67 393.35 2142 387 2135.09 384.37 2135.06 380.22 2128 378 2106.36 371.18 1941.22 \
384.76 1924 370 1895.81 345.83 1918.39 323.65 1908 288 1901.48 265.61 1899.42 257.31 1881 243 1793.35 174.88 1673.02 118.3 1619.55 \
94.75 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1620.63 92.56 1613.24 92 1618.67 97.05 ",
		pos="e,1611.9,91.392 2195,399.82 2177.7,397.33 2158.7,393.35 2142,387 2135.1,384.37 2135.1,380.22 2128,378 2106.4,371.18 1941.2,384.76 \
1924,370 1895.8,345.83 1918.4,323.65 1908,288 1901.5,265.61 1899.4,257.31 1881,243 1793.3,174.88 1673,118.3 1619.5,94.754"];
	normal_bam_readcount -> normal_snv_bam_readcount_tsv	[_draw_="c 7 -#000000 B 19 2221.07 395.62 2198.83 389.57 2167.24 381.82 2139 378 2127.65 376.46 1941.79 377.34 1933 370 1921.99 360.81 1926 \
352.84 1926 338.5 1926 338.5 1926 338.5 1926 269 1926 259.74 1889.66 114.44 1883 108 1878.8 103.94 1854.34 98.12 1829.76 93.11 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1830.27 90.72 1822.93 91.75 1829.31 95.52 ",
		pos="e,1821.4,91.449 2221.1,395.62 2198.8,389.57 2167.2,381.82 2139,378 2127.7,376.46 1941.8,377.34 1933,370 1922,360.81 1926,352.84 \
1926,338.5 1926,338.5 1926,338.5 1926,269 1926,259.74 1889.7,114.44 1883,108 1878.8,103.94 1854.3,98.119 1829.8,93.112"];
	normal_bam_readcount -> add_normal_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 13 2296.24 395.53 2305.27 393.24 2314.56 390.42 2323 387 2330.21 384.08 2330.61 380.42 2338 378 2356.03 372.08 2410.23 \
384.03 2423 370 2444.02 346.91 2418.14 333.69 2382.04 326.12 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2382.51 323.72 2375.17 324.79 2381.58 328.53 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2479 358.1 0 98 21 -snv_bam_readcount_tsv ",
		label=snv_bam_readcount_tsv,
		lp="2479,360",
		pos="e,2373.7,324.5 2296.2,395.53 2305.3,393.24 2314.6,390.42 2323,387 2330.2,384.08 2330.6,380.42 2338,378 2356,372.08 2410.2,384.03 \
2423,370 2444,346.91 2418.1,333.69 2382,326.12"];
	normal_bam_readcount -> add_normal_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 10 2277.87 395.52 2290.22 390.24 2303.6 382.1 2311 370 2315.29 362.98 2316.6 339.82 2312 333 2311.18 331.79 2310.27 \
330.66 2309.26 329.62 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2310.95 327.83 2303.93 325.41 2307.91 331.67 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2366 358.1 0 104 23 -indel_bam_readcount_tsv ",
		label=indel_bam_readcount_tsv,
		lp="2366,360",
		pos="e,2302.7,324.47 2277.9,395.52 2290.2,390.24 2303.6,382.1 2311,370 2315.3,362.98 2316.6,339.82 2312,333 2311.2,331.79 2310.3,330.66 \
2309.3,329.62"];
	annotate_variants -> vep_summary	[_draw_="c 7 -#000000 B 10 1899.4 440.57 1884.81 435.45 1871.13 427.44 1862 415 1841.56 387.13 1889.64 134.35 1912 108 1914.2 105.41 1927.59 \
99.73 1941.17 94.44 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1942.04 96.73 1947.69 91.93 1940.28 92.15 ",
		pos="e,1949.1,91.39 1899.4,440.57 1884.8,435.45 1871.1,427.44 1862,415 1841.6,387.13 1889.6,134.35 1912,108 1914.2,105.41 1927.6,99.729 \
1941.2,94.435"];
	annotate_variants -> tumor_bam_readcount	[_draw_="c 7 -#000000 B 4 1959.53 440.5 1952.27 434.62 1942.44 426.64 1934.06 419.84 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1935.6 417.94 1928.62 415.43 1932.52 421.74 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1954.5 425.6 0 13 3 -vcf ",
		label=vcf,
		lp="1954.5,427.5",
		pos="e,1927.4,414.48 1959.5,440.5 1952.3,434.62 1942.4,426.64 1934.1,419.84"];
	annotate_variants -> add_tumor_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 13 2056.36 447.21 2127.52 445.17 2230.99 440.87 2321 432 2327.37 431.37 2430.82 419.85 2435 415 2447.2 400.84 2432.37 \
384.91 2415 378 2385.53 366.28 2307.39 371.34 2263.36 369.88 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2263.65 367.45 2256.55 369.57 2263.43 372.34 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2445.5 403.1 0 13 3 -vcf ",
		label=vcf,
		lp="2445.5,405",
		pos="e,2255,369.5 2056.4,447.21 2127.5,445.17 2231,440.87 2321,432 2327.4,431.37 2430.8,419.85 2435,415 2447.2,400.84 2432.4,384.91 2415,\
378 2385.5,366.28 2307.4,371.34 2263.4,369.88"];
	annotate_variants -> normal_bam_readcount	[_draw_="c 7 -#000000 B 4 2025.32 440.5 2071.87 433.36 2138.44 423.13 2187.03 415.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2187.23 418.12 2193.78 414.63 2186.49 413.28 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2141.5 425.6 0 13 3 -vcf ",
		label=vcf,
		lp="2141.5,427.5",
		pos="e,2195.3,414.4 2025.3,440.5 2071.9,433.36 2138.4,423.13 2187,415.67"];
	add_normal_bam_readcount_to_vcf -> index	[_draw_="c 7 -#000000 B 4 2270 305.71 2270 300.59 2270 293.85 2270 287.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2272.45 287.78 2270 280.78 2267.55 287.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2276.5 290.6 0 13 3 -vcf ",
		label=vcf,
		lp="2276.5,292.5",
		pos="e,2270,279.27 2270,305.71 2270,300.59 2270,293.85 2270,287.67"];
	default1	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 2412 260.5 2412 279.5 2520 279.5 2520 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2466 267.5 0 92 14 -\"NORMAL,TUMOR\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"NORMAL,TUMOR\"",
		pos="2466,270",
		rects="2412,260.5,2520,279.5",
		width=1.5];
	default1 -> filter_vcf	[_draw_="c 7 -#000000 B 7 2465.03 260.7 2464.84 255 2465.63 247.66 2470 243 2472.17 240.68 2476.08 238.65 2481.03 236.87 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2481.52 239.28 2487.49 234.89 2480.08 234.6 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2501 245.6 0 62 12 -sample_names ",
		label=sample_names,
		lp="2501,247.5",
		pos="e,2488.9,234.44 2465,260.7 2464.8,255 2465.6,247.66 2470,243 2472.2,240.68 2476.1,238.65 2481,236.87"];
	default2	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 1797 440.5 1797 459.5 1859 459.5 1859 440.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1828 447.5 0 46 7 -\"TUMOR\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"TUMOR\"",
		pos="1828,450",
		rects="1797,440.5,1859,459.5",
		width=0.86111];
	default2 -> tumor_bam_readcount	[_draw_="c 7 -#000000 B 7 1826.63 440.7 1826.19 435.01 1826.69 427.68 1831 423 1834.78 418.9 1843.45 415.75 1853.9 413.35 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1854.33 415.76 1860.7 411.96 1853.35 410.96 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1846.5 425.6 0 31 6 -sample ",
		label=sample,
		lp="1846.5,427.5",
		pos="e,1862.2,411.66 1826.6,440.7 1826.2,435.01 1826.7,427.68 1831,423 1834.8,418.9 1843.5,415.75 1853.9,413.35"];
	default3	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 2319.5 395.5 2319.5 414.5 2366.5 414.5 2366.5 395.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2343 402.5 0 31 5 -\"DNA\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"DNA\"",
		pos="2343,405",
		rects="2319.5,395.5,2366.5,414.5",
		width=0.65278];
	default3 -> add_tumor_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 2319.78 396.08 2318.51 395.7 2317.24 395.34 2316 395 2278.71 384.81 2236.24 376.6 2202.02 370.8 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2202.76 368.44 2195.45 369.7 2201.95 373.27 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2302.5 380.6 0 41 9 -data_type ",
		label=data_type,
		lp="2302.5,382.5",
		pos="e,2194,369.45 2319.8,396.08 2318.5,395.7 2317.2,395.34 2316,395 2278.7,384.81 2236.2,376.6 2202,370.8"];
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		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2402 402.5 0 46 7 -\"TUMOR\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"TUMOR\"",
		pos="2402,405",
		rects="2371,395.5,2433,414.5",
		width=0.86111];
	default4 -> add_tumor_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 2381.18 395.59 2365.67 389.7 2343.84 382.15 2324 378 2311.19 375.32 2288.01 372.65 2262.23 370.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2262.48 367.81 2255.29 369.61 2262.04 372.69 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2385 380.6 0 58 11 -sample_name ",
		label=sample_name,
		lp="2385,382.5",
		pos="e,2253.8,369.47 2381.2,395.59 2365.7,389.7 2343.8,382.15 2324,378 2311.2,375.32 2288,372.65 2262.2,370.24"];
	default5	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 2279 440.5 2279 459.5 2347 459.5 2347 440.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2313 447.5 0 52 8 -\"NORMAL\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"NORMAL\"",
		pos="2313,450",
		rects="2279,440.5,2347,459.5",
		width=0.94444];
	default5 -> normal_bam_readcount	[_draw_="c 7 -#000000 B 7 2301.78 440.62 2294.74 435.43 2285.44 428.69 2277 423 2275.02 421.66 2272.94 420.3 2270.85 418.94 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2272.34 416.99 2265.12 415.29 2269.71 421.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2304.5 425.6 0 31 6 -sample ",
		label=sample,
		lp="2304.5,427.5",
		pos="e,2263.8,414.48 2301.8,440.62 2294.7,435.43 2285.4,428.69 2277,423 2275,421.66 2272.9,420.3 2270.9,418.94"];
	default6	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 2263.5 350.5 2263.5 369.5 2310.5 369.5 2310.5 350.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2287 357.5 0 31 5 -\"DNA\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"DNA\"",
		pos="2287,360",
		rects="2263.5,350.5,2310.5,369.5",
		width=0.65278];
	default6 -> add_normal_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 2279.21 350.53 2277.22 347.96 2275.28 345.01 2274 342 2272.78 339.14 2271.93 335.96 2271.33 332.84 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2273.77 332.61 2270.44 325.99 2268.91 333.25 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2294.5 335.6 0 41 9 -data_type ",
		label=data_type,
		lp="2294.5,337.5",
		pos="e,2270.2,324.49 2279.2,350.53 2277.2,347.96 2275.3,345.01 2274,342 2272.8,339.14 2271.9,335.96 2271.3,332.84"];
	default7	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 1943 350.5 1943 369.5 2011 369.5 2011 350.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1977 357.5 0 52 8 -\"NORMAL\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"NORMAL\"",
		pos="1977,360",
		rects="1943,350.5,2011,369.5",
		width=0.94444];
	default7 -> add_normal_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 2010.94 350.8 2012.31 350.52 2013.67 350.25 2015 350 2069.54 339.6 2131.24 331.28 2180.28 325.48 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2180.49 327.92 2187.16 324.67 2179.92 323.05 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2148 335.6 0 58 11 -sample_name ",
		label=sample_name,
		lp="2148,337.5",
		pos="e,2188.7,324.5 2010.9,350.8 2012.3,350.52 2013.7,350.25 2015,350 2069.5,339.6 2131.2,331.28 2180.3,325.48"];
}