digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 323 284 323 284 0 ",
		bb="0,0,284,323",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
	];
	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 260 8 315 276 315 276 260 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 303 0 84 15 -Workflow Inputs ",
			bb="8,260,276,315",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,305.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		bam	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16 268.5 16 287.5 54 287.5 54 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 35 275.5 0 22 3 -bam ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=bam,
			pos="35,278",
			rects="16,268.5,54,287.5",
			width=0.52778];
		interval_list	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 58 268.5 58 287.5 132 287.5 132 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 95 275.5 0 58 13 -interval_list ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=interval_list,
			pos="95,278",
			rects="58,268.5,132,287.5",
			width=1.0278];
		docm_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 136 268.5 136 287.5 200 287.5 200 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 168 275.5 0 48 8 -docm_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=docm_vcf,
			pos="168,278",
			rects="136,268.5,200,287.5",
			width=0.88889];
		reference	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 204.5 268.5 204.5 287.5 267.5 287.5 267.5 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 236 275.5 0 47 9 -reference ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=reference,
			pos="236,278",
			rects="204.5,268.5,267.5,287.5",
			width=0.875];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 60 8 60 63 235 63 235 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 114 15 0 92 16 -Workflow Outputs ",
			bb="60,8,235,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="114,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		unfiltered_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 68.5 35.5 68.5 54.5 151.5 54.5 151.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 110 42.5 0 67 14 -unfiltered_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=unfiltered_vcf,
			pos="110,45",
			rects="68.5,35.5,151.5,54.5",
			width=1.1528];
		filtered_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 155.5 35.5 155.5 54.5 226.5 54.5 226.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 191 42.5 0 55 12 -filtered_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=filtered_vcf,
			pos="191,45",
			rects="155.5,35.5,226.5,54.5",
			width=0.98611];
	}
	gatk_haplotypecaller	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 56 215.5 56 234.5 206 234.5 206 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 131 222.5 0 134 26 -HaplotypeCaller (GATK 3.6) ",
		height=0.27778,
		label="HaplotypeCaller (GATK 3.6)",
		pos="131,225",
		rects="56,215.5,206,234.5",
		width=2.0833];
	bam -> gatk_haplotypecaller	[_draw_="c 7 -#000000 B 10 46.11 268.53 49.85 265.75 54.06 262.69 58 260 69.71 252 72.28 249.27 85 243 89.01 241.02 93.31 239.14 97.61 237.4 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 98.24 239.79 103.88 234.97 96.47 235.22 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 94.5 245.6 0 19 3 -bam ",
		label=bam,
		lp="94.5,247.5",
		pos="e,105.3,234.43 46.11,268.53 49.845,265.75 54.064,262.69 58,260 69.71,252 72.281,249.27 85,243 89.009,241.02 93.309,239.14 97.611,\
237.4"];
	interval_list -> gatk_haplotypecaller	[_draw_="c 7 -#000000 B 7 97.79 268.62 100.46 261.39 104.97 250.88 111 243 111.76 242 112.59 241.03 113.46 240.07 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 115.12 241.88 118.52 235.28 111.75 238.32 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 134.5 245.6 0 47 13 -interval_list ",
		label=interval_list,
		lp="134.5,247.5",
		pos="e,119.61,234.24 97.793,268.62 100.46,261.39 104.97,250.88 111,243 111.76,242 112.59,241.03 113.46,240.07"];
	docm_vcf -> gatk_haplotypecaller	[_draw_="c 7 -#000000 B 7 166.29 268.77 164.46 261.43 160.97 250.69 155 243 154.14 241.89 153.19 240.82 152.17 239.8 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 153.96 238.11 147.04 235.46 150.8 241.85 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 179.5 245.6 0 39 8 -docm_vcf ",
		label=docm_vcf,
		lp="179.5,247.5",
		pos="e,145.88,234.48 166.29,268.77 164.46,261.43 160.97,250.69 155,243 154.14,241.89 153.19,240.82 152.17,239.8"];
	reference -> gatk_haplotypecaller	[_draw_="c 7 -#000000 B 7 229.46 268.73 222.84 260.93 211.93 249.5 200 243 195.84 240.73 191.37 238.76 186.78 237.05 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 187.83 234.81 180.41 234.89 186.25 239.46 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 232 245.6 0 40 9 -reference ",
		label=reference,
		lp="232,247.5",
		pos="e,178.98,234.4 229.46,268.73 222.84,260.93 211.93,249.5 200,243 195.84,240.73 191.37,238.76 186.78,237.05"];
	docm_filter	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 135.5 170.5 135.5 189.5 204.5 189.5 204.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 170 177.5 0 53 11 -docm filter ",
		height=0.27778,
		label="docm filter",
		pos="170,180",
		rects="135.5,170.5,204.5,189.5",
		width=0.95833];
	bgzip	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 143.5 125.5 143.5 144.5 208.5 144.5 208.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 176 132.5 0 49 9 -bgzip VCF ",
		height=0.27778,
		label="bgzip VCF",
		pos="176,135",
		rects="143.5,125.5,208.5,144.5",
		width=0.90278];
	docm_filter -> bgzip	[_draw_="c 7 -#000000 B 4 171.16 170.71 171.87 165.59 172.81 158.85 173.67 152.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 176.1 153.04 174.64 145.76 171.24 152.36 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 179.5 155.6 0 13 4 -file ",
		label=file,
		lp="179.5,157.5",
		pos="e,174.85,144.27 171.16,170.71 171.87,165.59 172.81,158.85 173.67,152.67"];
	index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 158 80.5 158 99.5 220 99.5 220 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 189 87.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="189,90",
		rects="158,80.5,220,99.5",
		width=0.86111];
	index -> filtered_vcf	[_draw_="c 7 -#000000 B 4 189.39 80.71 189.62 75.59 189.94 68.85 190.22 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 192.67 62.88 190.55 55.78 187.77 62.66 ",
		pos="e,190.62,54.265 189.39,80.709 189.62,75.593 189.94,68.848 190.22,62.666"];
	gatk_haplotypecaller -> unfiltered_vcf	[_draw_="c 7 -#000000 B 10 129.17 215.8 127.4 207.19 125 193.21 125 181 125 181 125 181 125 89 125 79.61 121.77 69.68 118.31 61.73 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 120.63 60.89 115.4 55.63 116.21 63.01 ",
		pos="e,114.75,54.269 129.17,215.8 127.4,207.19 125,193.21 125,181 125,181 125,181 125,89 125,79.611 121.77,69.68 118.31,61.73"];
	gatk_haplotypecaller -> docm_filter	[_draw_="c 7 -#000000 B 4 138.52 215.71 143.7 210 150.72 202.26 156.82 195.54 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 158.6 197.22 161.49 190.39 154.97 193.93 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 173 200.6 0 40 8 -docm_out ",
		label=docm_out,
		lp="173,202.5",
		pos="e,162.5,189.27 138.52,215.71 143.7,210 150.72,202.26 156.82,195.54"];
	bgzip -> index	[_draw_="c 7 -#000000 B 4 178.51 125.71 180.09 120.47 182.19 113.53 184.09 107.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 186.38 108.12 186.06 100.71 181.69 106.71 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 189.5 110.6 0 13 3 -vcf ",
		label=vcf,
		lp="189.5,112.5",
		pos="e,186.5,99.265 178.51,125.71 180.09,120.47 182.19,113.53 184.09,107.24"];
}