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		filter_minimum_depth	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 3058.5 673.5 3058.5 692.5 3183.5 692.5 3183.5 673.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3121 680.5 0 109 20 -filter_minimum_depth ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=filter_minimum_depth,
			pos="3121,683",
			rects="3058.5,673.5,3183.5,692.5",
			width=1.7361];
		varscan_max_normal_freq	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 504 673.5 504 692.5 650 692.5 650 673.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 577 680.5 0 130 23 -varscan_max_normal_freq ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=varscan_max_normal_freq,
			pos="577,683",
			rects="504,673.5,650,692.5",
			width=2.0278];
		strelka_cpu_reserved	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 654 673.5 654 692.5 774 692.5 774 673.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 714 680.5 0 104 20 -strelka_cpu_reserved ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=strelka_cpu_reserved,
			pos="714,683",
			rects="654,673.5,774,692.5",
			width=1.6667];
		varscan_min_coverage	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16.5 673.5 16.5 692.5 145.5 692.5 145.5 673.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 81 680.5 0 113 20 -varscan_min_coverage ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=varscan_min_coverage,
			pos="81,683",
			rects="16.5,673.5,145.5,692.5",
			width=1.7917];
	}
	annotate_variants	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2169.5 440.5 2169.5 459.5 2342.5 459.5 2342.5 440.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2256 447.5 0 157 32 -Ensembl Variant Effect Predictor ",
		height=0.27778,
		label="Ensembl Variant Effect Predictor",
		pos="2256,450",
		rects="2169.5,440.5,2342.5,459.5",
		width=2.4028];
	vep_cache_dir -> annotate_variants	[_draw_="c 7 -#000000 B 10 2296.66 673.69 2304.65 664.14 2316 647.63 2316 631 2316 631 2316 631 2316 494 2316 479.75 2304.68 469.77 2291.88 \
463.03 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2292.99 460.85 2285.61 460.08 2290.9 465.28 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2336 560.6 0 40 9 -cache_dir ",
		label=cache_dir,
		lp="2336,562.5",
		pos="e,2284.2,459.44 2296.7,673.69 2304.6,664.14 2316,647.63 2316,631 2316,631 2316,631 2316,494 2316,479.75 2304.7,469.77 2291.9,463.03"];
	filter_vcf	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 2486 215.5 2486 234.5 2614 234.5 2614 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2550 222.5 0 112 25 -Apply filters to VCF file ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="Apply filters to VCF file",
		pos="2550,225",
		rects="2486,215.5,2614,234.5",
		width=1.7778];
	filter_mapq0_threshold -> filter_vcf	[_draw_="c 7 -#000000 B 31 1470.31 673.51 1482.48 670.31 1496.82 666.98 1510 665 1525.63 662.66 1641.14 668.48 1652 657 1654.75 654.09 1653.39 \
651.75 1652 648 1642.88 623.31 1597.64 571.43 1575 558 1560.16 549.2 1552.13 558.31 1537 550 1482.12 519.87 1415.86 493.12 1449 \
440 1510.55 341.35 1595.64 400.58 1684 325 1692.25 317.95 1690.51 312.85 1698 305 1706.53 296.06 1708.47 292.45 1720 288 1857.38 \
235.03 2302 227.11 2477.65 226.08 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2477.56 228.53 2484.55 226.04 2477.53 223.63 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1496 448.1 0 94 22 -filter_mapq0_threshold ",
		label=filter_mapq0_threshold,
		lp="1496,450",
		pos="e,2486.1,226.03 1470.3,673.51 1482.5,670.31 1496.8,666.98 1510,665 1525.6,662.66 1641.1,668.48 1652,657 1654.7,654.09 1653.4,651.75 \
1652,648 1642.9,623.31 1597.6,571.43 1575,558 1560.2,549.2 1552.1,558.31 1537,550 1482.1,519.87 1415.9,493.12 1449,440 1510.6,341.35 \
1595.6,400.58 1684,325 1692.2,317.95 1690.5,312.85 1698,305 1706.5,296.06 1708.5,292.45 1720,288 1857.4,235.03 2302,227.11 2477.6,\
226.08"];
	strelka	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 917.5 620.5 917.5 639.5 1014.5 639.5 1014.5 620.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 966 627.5 0 81 16 -strelka workflow ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="strelka workflow",
		pos="966,630",
		rects="917.5,620.5,1014.5,639.5",
		width=1.3472];
	strelka_exome_mode -> strelka	[_draw_="c 7 -#000000 B 10 811.19 673.54 800.03 670.43 787 667.15 775 665 737.51 658.28 664.91 675.75 691 648 705.62 632.45 833.55 630.32 \
909.67 630.45 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 909.25 632.9 916.26 630.47 909.26 628 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 718.5 650.6 0 55 10 -exome_mode ",
		label=exome_mode,
		lp="718.5,652.5",
		pos="e,917.77,630.48 811.19,673.54 800.03,670.43 787,667.15 775,665 737.51,658.28 664.91,675.75 691,648 705.62,632.45 833.55,630.32 909.67,\
630.45"];
	mutect	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 1139 620.5 1139 639.5 1277 639.5 1277 620.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1208 627.5 0 122 24 -mutect parallel workflow ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="mutect parallel workflow",
		pos="1208,630",
		rects="1139,620.5,1277,639.5",
		width=1.9167];
	normal_bam -> mutect	[_draw_="c 7 -#000000 B 7 1169.45 673.54 1181.86 668.46 1195.63 662.03 1200 657 1202.44 654.19 1204.13 650.65 1205.31 647.09 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1207.62 647.95 1206.88 640.57 1202.86 646.81 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1229.5 650.6 0 51 10 -normal_bam ",
		label=normal_bam,
		lp="1229.5,652.5",
		pos="e,1207.2,639.1 1169.4,673.54 1181.9,668.46 1195.6,662.03 1200,657 1202.4,654.19 1204.1,650.65 1205.3,647.09"];
	normal_bam_readcount	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1588 395.5 1588 414.5 1698 414.5 1698 395.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1643 402.5 0 94 17 -run bam-readcount ",
		height=0.27778,
		label="run bam-readcount",
		pos="1643,405",
		rects="1588,395.5,1698,414.5",
		width=1.5278];
	normal_bam -> normal_bam_readcount	[_draw_="c 7 -#000000 B 25 1165.07 673.66 1172.63 670.49 1181.6 667.13 1190 665 1218.64 657.73 1227.7 665.51 1256 657 1264.57 654.42 1265.78 \
651.52 1274 648 1284.86 643.35 1364.16 618.54 1374 612 1392.6 599.64 1391.39 589.93 1408 575 1449.17 538.01 1466.69 538.14 1516 \
513 1563.63 488.71 1588.49 499.97 1624 460 1626.62 457.05 1633.3 436.97 1638 422.16 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1640.28 423.07 1640.04 415.66 1635.6 421.61 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1488.5 538.1 0 19 3 -bam ",
		label=bam,
		lp="1488.5,540",
		pos="e,1640.5,414.21 1165.1,673.66 1172.6,670.49 1181.6,667.13 1190,665 1218.6,657.73 1227.7,665.51 1256,657 1264.6,654.42 1265.8,651.52 \
1274,648 1284.9,643.35 1364.2,618.54 1374,612 1392.6,599.64 1391.4,589.93 1408,575 1449.2,538.01 1466.7,538.14 1516,513 1563.6,488.71 \
1588.5,499.97 1624,460 1626.6,457.05 1633.3,436.97 1638,422.16"];
	normal_bam -> strelka	[_draw_="c 7 -#000000 B 10 1129.4 673.6 1121.77 670.33 1112.62 666.92 1104 665 1090.2 661.92 988.53 665.18 977 657 973.72 654.67 971.41 651.16 \
969.79 647.47 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 972.16 646.84 967.69 640.92 967.49 648.34 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1002.5 650.6 0 51 10 -normal_bam ",
		label=normal_bam,
		lp="1002.5,652.5",
		pos="e,967.22,639.48 1129.4,673.6 1121.8,670.33 1112.6,666.92 1104,665 1090.2,661.92 988.53,665.18 977,657 973.72,654.67 971.41,651.16 \
969.79,647.47"];
	pindel	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 1357 620.5 1357 639.5 1491 639.5 1491 620.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1424 627.5 0 118 24 -pindel parallel workflow ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="pindel parallel workflow",
		pos="1424,630",
		rects="1357,620.5,1491,639.5",
		width=1.8611];
	normal_bam -> pindel	[_draw_="c 7 -#000000 B 13 1164.6 673.61 1172.24 670.35 1181.39 666.94 1190 665 1241.71 653.34 1256.89 666.7 1309 657 1322.27 654.53 1324.92 \
651.31 1338 648 1347.78 645.52 1358.26 643.19 1368.42 641.09 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1368.63 643.55 1375 639.76 1367.65 638.75 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1363.5 650.6 0 51 10 -normal_bam ",
		label=normal_bam,
		lp="1363.5,652.5",
		pos="e,1376.5,639.46 1164.6,673.61 1172.2,670.35 1181.4,666.94 1190,665 1241.7,653.34 1256.9,666.7 1309,657 1322.3,654.53 1324.9,651.31 \
1338,648 1347.8,645.52 1358.3,643.19 1368.4,641.09"];
	varscan	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 504.5 620.5 504.5 639.5 607.5 639.5 607.5 620.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 556 627.5 0 87 16 -Varscan Workflow ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="Varscan Workflow",
		pos="556,630",
		rects="504.5,620.5,607.5,639.5",
		width=1.4306];
	normal_bam -> varscan	[_draw_="c 7 -#000000 B 13 1129.85 673.65 1122.13 670.31 1112.8 666.83 1104 665 1052.41 654.27 918.08 669.97 867 657 858.33 654.8 857.64 \
650.31 849 648 806.51 636.66 688.13 632.88 615.5 631.63 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 615.87 629.18 608.83 631.52 615.79 634.08 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 892.5 650.6 0 51 10 -normal_bam ",
		label=normal_bam,
		lp="892.5,652.5",
		pos="e,607.32,631.49 1129.8,673.65 1122.1,670.31 1112.8,666.83 1104,665 1052.4,654.27 918.08,669.97 867,657 858.33,654.8 857.64,650.31 \
849,648 806.51,636.66 688.13,632.88 615.5,631.63"];
	interval_list -> mutect	[_draw_="c 7 -#000000 B 13 924.24 673.67 916.96 670.42 908.24 667 900 665 858.32 654.87 775.25 678.9 805 648 813.18 639.51 1005.22 640.5 \
1017 640 1054.46 638.41 1096.04 636.47 1130.82 634.8 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1130.66 637.26 1137.54 634.48 1130.43 632.37 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 828.5 650.6 0 47 13 -interval_list ",
		label=interval_list,
		lp="828.5,652.5",
		pos="e,1139,634.41 924.24,673.67 916.96,670.42 908.24,667 900,665 858.32,654.87 775.25,678.9 805,648 813.18,639.51 1005.2,640.5 1017,\
640 1054.5,638.41 1096,636.47 1130.8,634.8"];
	interval_list -> strelka	[_draw_="c 7 -#000000 B 13 924.27 673.55 917 670.28 908.27 666.87 900 665 883.61 661.28 760.56 669.19 749 657 746.25 654.1 746.28 650.94 \
749 648 759.71 636.42 848.69 632.72 909.33 631.54 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 909.22 633.99 916.17 631.41 909.13 629.09 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 772.5 650.6 0 47 13 -interval_list ",
		label=interval_list,
		lp="772.5,652.5",
		pos="e,917.69,631.39 924.27,673.55 917,670.28 908.27,666.87 900,665 883.61,661.28 760.56,669.19 749,657 746.25,654.1 746.28,650.94 749,\
648 759.71,636.42 848.69,632.72 909.33,631.54"];
	interval_list -> pindel	[_draw_="c 7 -#000000 B 10 930.89 673.65 923.07 666.24 914.72 655.45 922 648 928.93 640.91 1269.09 640.42 1279 640 1301.68 639.04 1326.34 \
637.65 1348.77 636.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1348.91 638.68 1355.75 635.79 1348.6 633.79 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 945.5 650.6 0 47 13 -interval_list ",
		label=interval_list,
		lp="945.5,652.5",
		pos="e,1357.3,635.7 930.89,673.65 923.07,666.24 914.72,655.45 922,648 928.93,640.91 1269.1,640.42 1279,640 1301.7,639.04 1326.3,637.65 \
1348.8,636.24"];
	interval_list -> varscan	[_draw_="c 7 -#000000 B 10 924.69 673.61 917.35 670.27 908.44 666.79 900 665 865.32 657.64 613.45 671.3 581 657 575.46 654.56 570.53 650.25 \
566.55 645.83 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 568.68 644.57 562.38 640.67 564.87 647.65 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 604.5 650.6 0 47 13 -interval_list ",
		label=interval_list,
		lp="604.5,652.5",
		pos="e,561.43,639.49 924.69,673.61 917.35,670.27 908.44,666.79 900,665 865.32,657.64 613.45,671.3 581,657 575.46,654.56 570.53,650.25 \
566.55,645.83"];
	readcount_minimum_mapping_quality -> normal_bam_readcount	[_draw_="c 7 -#000000 B 19 1946.05 673.52 1968.48 666.43 1987 653.7 1987 631 1987 631 1987 631 1987 516.5 1987 502.16 1990.78 494.46 1980 \
485 1972.45 478.38 1899.98 478.11 1890 477 1832.96 470.68 1817.17 475.81 1762 460 1726.73 449.9 1688.53 431.01 1665.18 418.47 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1666.51 416.4 1659.19 415.2 1664.16 420.7 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2030.5 538.1 0 87 19 -min_mapping_quality ",
		label=min_mapping_quality,
		lp="2030.5,540",
		pos="e,1657.9,414.48 1946,673.52 1968.5,666.43 1987,653.7 1987,631 1987,631 1987,631 1987,516.5 1987,502.16 1990.8,494.46 1980,485 1972.5,\
478.38 1900,478.11 1890,477 1833,470.68 1817.2,475.81 1762,460 1726.7,449.9 1688.5,431.01 1665.2,418.47"];
	tumor_bam_readcount	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1788 395.5 1788 414.5 1898 414.5 1898 395.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1843 402.5 0 94 17 -run bam-readcount ",
		height=0.27778,
		label="run bam-readcount",
		pos="1843,405",
		rects="1788,395.5,1898,414.5",
		width=1.5278];
	readcount_minimum_mapping_quality -> tumor_bam_readcount	[_draw_="c 7 -#000000 B 19 1914.47 673.51 1933.21 670.38 1955.08 667.08 1975 665 1983.69 664.09 2125.98 663.33 2132 657 2172.95 613.91 2133.39 \
570.65 2090 530 2021.16 465.5 1980.72 478.79 1887 468 1873.83 466.48 1777.05 469.68 1768 460 1751.64 442.51 1779.86 427.05 1806.23 \
417.21 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1806.74 419.63 1812.51 414.97 1805.1 415.01 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2153.5 538.1 0 87 19 -min_mapping_quality ",
		label=min_mapping_quality,
		lp="2153.5,540",
		pos="e,1813.9,414.46 1914.5,673.51 1933.2,670.38 1955.1,667.08 1975,665 1983.7,664.09 2126,663.33 2132,657 2173,613.91 2133.4,570.65 \
2090,530 2021.2,465.5 1980.7,478.79 1887,468 1873.8,466.48 1777.1,469.68 1768,460 1751.6,442.51 1779.9,427.05 1806.2,417.21"];
	pindel_insert_size -> pindel	[_draw_="c 7 -#000000 B 13 1343.12 673.57 1353.1 670.3 1364.99 666.89 1376 665 1385.54 663.36 1543.32 664 1550 657 1552.76 654.11 1552.63 \
651.01 1550 648 1542.72 639.67 1521.84 635.26 1499.12 632.97 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1499.38 630.54 1492.19 632.36 1498.95 635.42 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1574 650.6 0 44 11 -insert_size ",
		label=insert_size,
		lp="1574,652.5",
		pos="e,1490.7,632.22 1343.1,673.57 1353.1,670.3 1365,666.89 1376,665 1385.5,663.36 1543.3,664 1550,657 1552.8,654.11 1552.6,651.01 1550,\
648 1542.7,639.67 1521.8,635.26 1499.1,632.97"];
	variants_to_table	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2729.5 72.5 2729.5 91.5 2870.5 91.5 2870.5 72.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2800 79.5 0 125 25 -SelectVariants (GATK 3.6) ",
		height=0.27778,
		label="SelectVariants (GATK 3.6)",
		pos="2800,82",
		rects="2729.5,72.5,2870.5,91.5",
		width=1.9583];
	reference -> variants_to_table	[_draw_="c 7 -#000000 B 34 1744.22 673.68 1750.66 670.34 1758.49 666.86 1766 665 1845.03 645.46 1869.52 674.64 1949 657 1968.26 652.73 1971.93 \
647.91 1990 640 2069.8 605.09 2087.7 591.75 2168 558 2177.21 554.13 2183.33 558.22 2189 550 2217.2 509.08 2137.27 478.24 2169 440 \
2207.4 393.71 2243.8 430.17 2302 415 2412.7 386.14 2435.67 363.27 2546 333 2660.73 301.52 2800 367.47 2800 248.5 2800 248.5 2800 \
248.5 2800 134 2800 122.59 2800 109.75 2800 99.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2802.45 99.82 2800 92.82 2797.55 99.82 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2434 380.6 0 40 9 -reference ",
		label=reference,
		lp="2434,382.5",
		pos="e,2800,91.304 1744.2,673.68 1750.7,670.34 1758.5,666.86 1766,665 1845,645.46 1869.5,674.64 1949,657 1968.3,652.73 1971.9,647.91 \
1990,640 2069.8,605.09 2087.7,591.75 2168,558 2177.2,554.13 2183.3,558.22 2189,550 2217.2,509.08 2137.3,478.24 2169,440 2207.4,393.71 \
2243.8,430.17 2302,415 2412.7,386.14 2435.7,363.27 2546,333 2660.7,301.52 2800,367.47 2800,248.5 2800,248.5 2800,248.5 2800,134 \
2800,122.59 2800,109.75 2800,99.808"];
	reference -> filter_vcf	[_draw_="c 7 -#000000 B 22 1744.57 673.52 1750.94 670.24 1758.62 666.84 1766 665 1854.62 642.86 1892.72 688.69 1970 640 2021.72 607.42 2045.79 \
604.23 2074 550 2100.19 499.67 2045.68 461.88 2087 423 2102.71 408.22 2260.86 422.73 2281 415 2334.34 394.53 2333.73 366.51 2380 \
333 2431.25 295.89 2495.26 257.63 2528.19 238.49 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2529.34 240.66 2534.18 235.03 2526.89 236.41 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2094 448.1 0 40 9 -reference ",
		label=reference,
		lp="2094,450",
		pos="e,2535.5,234.27 1744.6,673.52 1750.9,670.24 1758.6,666.84 1766,665 1854.6,642.86 1892.7,688.69 1970,640 2021.7,607.42 2045.8,604.23 \
2074,550 2100.2,499.67 2045.7,461.88 2087,423 2102.7,408.22 2260.9,422.73 2281,415 2334.3,394.53 2333.7,366.51 2380,333 2431.3,295.89 \
2495.3,257.63 2528.2,238.49"];
	reference -> annotate_variants	[_draw_="c 7 -#000000 B 16 1744.58 673.53 1750.94 670.26 1758.63 666.86 1766 665 1798.8 656.73 1885.95 667.81 1918 657 1958.01 643.5 2041.57 \
575.79 2075 550 2085.73 541.73 2086.74 537.53 2098 530 2140.53 501.54 2194.74 476.62 2227.34 462.71 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2228.25 464.99 2233.75 460.01 2226.35 460.47 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2084 560.6 0 40 9 -reference ",
		label=reference,
		lp="2084,562.5",
		pos="e,2235.1,459.42 1744.6,673.53 1750.9,670.26 1758.6,666.86 1766,665 1798.8,656.73 1886,667.81 1918,657 1958,643.5 2041.6,575.79 2075,\
550 2085.7,541.73 2086.7,537.53 2098,530 2140.5,501.54 2194.7,476.62 2227.3,462.71"];
	combine	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1217.5 575.5 1217.5 594.5 1372.5 594.5 1372.5 575.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1295 582.5 0 139 26 -CombineVariants (GATK 3.6) ",
		height=0.27778,
		label="CombineVariants (GATK 3.6)",
		pos="1295,585",
		rects="1217.5,575.5,1372.5,594.5",
		width=2.1528];
	reference -> combine	[_draw_="c 7 -#000000 B 7 1729.69 673.65 1728.92 665.79 1726.49 654.33 1719 648 1705.98 637 1494.11 609.95 1374.91 595.49 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1375.24 593.06 1368 594.65 1374.65 597.92 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1709 628.1 0 40 9 -reference ",
		label=reference,
		lp="1709,630",
		pos="e,1366.5,594.47 1729.7,673.65 1728.9,665.79 1726.5,654.33 1719,648 1706,637 1494.1,609.95 1374.9,595.49"];
	reference -> mutect	[_draw_="c 7 -#000000 B 16 1715.48 673.5 1709.35 670.3 1702.02 666.97 1695 665 1658.89 654.87 1646.44 669.26 1611 657 1604.01 654.58 1604.06 \
650.2 1597 648 1571.32 639.99 1381.87 641.27 1355 640 1332.25 638.93 1307.54 637.51 1284.99 636.12 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1285.43 633.7 1278.29 635.71 1285.13 638.59 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1631 650.6 0 40 9 -reference ",
		label=reference,
		lp="1631,652.5",
		pos="e,1276.8,635.61 1715.5,673.5 1709.4,670.3 1702,666.97 1695,665 1658.9,654.87 1646.4,669.26 1611,657 1604,654.58 1604.1,650.2 1597,\
648 1571.3,639.99 1381.9,641.27 1355,640 1332.3,638.93 1307.5,637.51 1285,636.12"];
	reference -> normal_bam_readcount	[_draw_="c 7 -#000000 B 13 1732.36 673.76 1735.45 661.26 1739.43 637.17 1730 620 1702.11 569.2 1647.89 600.8 1620 550 1611.62 534.73 1624.49 \
511.88 1634 460 1636.28 447.56 1638.62 433.47 1640.34 422.8 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1642.76 423.23 1641.44 415.93 1637.92 422.45 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1652.5 538.1 0 65 15 -reference_fasta ",
		label=reference_fasta,
		lp="1652.5,540",
		pos="e,1641.7,414.43 1732.4,673.76 1735.4,661.26 1739.4,637.17 1730,620 1702.1,569.2 1647.9,600.8 1620,550 1611.6,534.73 1624.5,511.88 \
1634,460 1636.3,447.56 1638.6,433.47 1640.3,422.8"];
	reference -> strelka	[_draw_="c 7 -#000000 B 16 1716.2 673.67 1709.95 670.34 1702.34 666.85 1695 665 1614.78 644.72 1590.19 672.97 1509 657 1497.41 654.72 1495.61 \
650.16 1484 648 1446.09 640.93 1175.54 641.46 1137 640 1098.8 638.55 1055.82 636.29 1022.51 634.39 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1022.9 631.96 1015.77 634.01 1022.62 636.85 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1529 650.6 0 40 9 -reference ",
		label=reference,
		lp="1529,652.5",
		pos="e,1014.3,633.92 1716.2,673.67 1710,670.34 1702.3,666.85 1695,665 1614.8,644.72 1590.2,672.97 1509,657 1497.4,654.72 1495.6,650.16 \
1484,648 1446.1,640.93 1175.5,641.46 1137,640 1098.8,638.55 1055.8,636.29 1022.5,634.39"];
	reference -> pindel	[_draw_="c 7 -#000000 B 7 1715.32 673.63 1700.06 665.39 1675.18 653.32 1652 648 1601.93 636.52 1544.22 632.3 1499.39 630.94 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1499.46 628.49 1492.4 630.75 1499.33 633.39 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1698 650.6 0 40 9 -reference ",
		label=reference,
		lp="1698,652.5",
		pos="e,1490.9,630.71 1715.3,673.63 1700.1,665.39 1675.2,653.32 1652,648 1601.9,636.52 1544.2,632.3 1499.4,630.94"];
	reference -> varscan	[_draw_="c 7 -#000000 B 16 1716.21 673.62 1709.97 670.27 1702.35 666.79 1695 665 1662.5 657.07 1424.34 671.11 1394 657 1389.15 654.74 1390.86 \
650.23 1386 648 1374.13 642.55 929.05 640.27 916 640 810.29 637.78 687.13 634.56 615.71 632.64 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 615.84 630.19 608.78 632.45 615.71 635.09 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1414 650.6 0 40 9 -reference ",
		label=reference,
		lp="1414,652.5",
		pos="e,607.27,632.41 1716.2,673.62 1710,670.27 1702.4,666.79 1695,665 1662.5,657.07 1424.3,671.11 1394,657 1389.1,654.74 1390.9,650.23 \
1386,648 1374.1,642.55 929.05,640.27 916,640 810.29,637.78 687.13,634.56 615.71,632.64"];
	reference -> tumor_bam_readcount	[_draw_="c 7 -#000000 B 16 1744.98 673.56 1751.29 670.37 1758.82 667.03 1766 665 1798.48 655.83 1914 664.75 1914 631 1914 631 1914 631 1914 \
561.5 1914 530.64 1923.54 446.89 1904 423 1902.93 421.69 1901.77 420.48 1900.53 419.36 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1902.1 417.47 1894.99 415.34 1899.22 421.43 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1947.5 538.1 0 65 15 -reference_fasta ",
		label=reference_fasta,
		lp="1947.5,540",
		pos="e,1893.8,414.45 1745,673.56 1751.3,670.37 1758.8,667.03 1766,665 1798.5,655.83 1914,664.75 1914,631 1914,631 1914,631 1914,561.5 \
1914,530.64 1923.5,446.89 1904,423 1902.9,421.69 1901.8,420.48 1900.5,419.36"];
	varscan_strand_filter -> varscan	[_draw_="c 7 -#000000 B 7 232.2 673.62 255.37 665.63 292.17 653.95 325 648 382.67 637.55 449.55 633.49 496.46 631.93 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 496.25 634.39 503.17 631.72 496.1 629.49 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 349.5 650.6 0 49 13 -strand_filter ",
		label=strand_filter,
		lp="349.5,652.5",
		pos="e,504.69,631.67 232.2,673.62 255.37,665.63 292.17,653.95 325,648 382.67,637.55 449.55,633.49 496.46,631.93"];
	vep_plugins -> annotate_variants	[_draw_="c 7 -#000000 B 22 2029.6 673.53 2036.98 670.33 2045.74 667 2054 665 2073.3 660.34 2127.43 669.32 2143 657 2179.37 628.22 2143.42 \
591.01 2176 558 2183.6 550.3 2191.17 557.48 2199 550 2221.5 528.51 2212.59 513.53 2225 485 2228.33 477.34 2227.7 474.46 2233 468 \
2233.91 466.89 2234.91 465.82 2235.96 464.78 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2237.47 466.71 2241.23 460.32 2234.31 462.97 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2191.5 560.6 0 31 7 -plugins ",
		label=plugins,
		lp="2191.5,562.5",
		pos="e,2242.4,459.34 2029.6,673.53 2037,670.33 2045.7,667 2054,665 2073.3,660.34 2127.4,669.32 2143,657 2179.4,628.22 2143.4,591.01 2176,\
558 2183.6,550.3 2191.2,557.48 2199,550 2221.5,528.51 2212.6,513.53 2225,485 2228.3,477.34 2227.7,474.46 2233,468 2233.9,466.89 \
2234.9,465.82 2236,464.78"];
	variants_to_table_fields -> variants_to_table	[_draw_="c 7 -#000000 B 10 3409.01 673.54 3359.4 660.96 3273 638.03 3273 631 3273 631 3273 631 3273 134 3273 94.81 3013.06 85.7 2878.58 83.61 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2878.85 81.16 2871.82 83.51 2878.78 86.06 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3284.5 380.6 0 23 6 -fields ",
		label=fields,
		lp="3284.5,382.5",
		pos="e,2870.3,83.484 3409,673.54 3359.4,660.96 3273,638.03 3273,631 3273,631 3273,631 3273,134 3273,94.814 3013.1,85.699 2878.6,83.606"];
	tumor_bam -> filter_vcf	[_draw_="c 7 -#000000 B 37 1243.3 673.59 1250.65 670.23 1259.55 666.76 1268 665 1292.53 659.89 1696.15 667.3 1719 657 1777.79 630.5 1776.65 \
600.3 1817 550 1823.79 541.54 1822.89 537.2 1831 530 1846.84 515.94 1895.87 494.08 1915 485 1961.97 462.7 1974.1 457.7 2023 440 \
2047.06 431.29 2052.79 427.38 2078 423 2117.23 416.18 2219.52 428.43 2257 415 2257.49 414.82 2316.72 370.44 2317 370 2324.78 357.95 \
2324 352.84 2324 338.5 2324 338.5 2324 338.5 2324 269 2324 237.16 2411.65 228.3 2477.79 226.15 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2477.7 228.6 2484.63 225.95 2477.56 223.7 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2046 448.1 0 46 9 -tumor_bam ",
		label=tumor_bam,
		lp="2046,450",
		pos="e,2486.1,225.91 1243.3,673.59 1250.6,670.23 1259.6,666.76 1268,665 1292.5,659.89 1696.2,667.3 1719,657 1777.8,630.5 1776.6,600.3 \
1817,550 1823.8,541.54 1822.9,537.2 1831,530 1846.8,515.94 1895.9,494.08 1915,485 1962,462.7 1974.1,457.7 2023,440 2047.1,431.29 \
2052.8,427.38 2078,423 2117.2,416.18 2219.5,428.43 2257,415 2257.5,414.82 2316.7,370.44 2317,370 2324.8,357.95 2324,352.84 2324,\
338.5 2324,338.5 2324,338.5 2324,269 2324,237.16 2411.7,228.3 2477.8,226.15"];
	tumor_bam -> mutect	[_draw_="c 7 -#000000 B 7 1244.42 673.68 1255.64 667.15 1266.95 657.59 1260 648 1259.12 646.78 1258.15 645.65 1257.1 644.6 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1258.62 642.68 1251.59 640.34 1255.62 646.56 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1285 650.6 0 46 9 -tumor_bam ",
		label=tumor_bam,
		lp="1285,652.5",
		pos="e,1250.4,639.41 1244.4,673.68 1255.6,667.15 1267,657.59 1260,648 1259.1,646.78 1258.1,645.65 1257.1,644.6"];
	tumor_bam -> strelka	[_draw_="c 7 -#000000 B 13 1208.93 673.55 1202.15 670.58 1194.31 667.4 1187 665 1172.25 660.17 1166.33 664.95 1153 657 1148.4 654.26 1149.77 \
650.42 1145 648 1124.21 637.45 1066.74 633.43 1022.47 631.9 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1022.68 629.46 1015.6 631.68 1022.52 634.35 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1176 650.6 0 46 9 -tumor_bam ",
		label=tumor_bam,
		lp="1176,652.5",
		pos="e,1014.1,631.64 1208.9,673.55 1202.2,670.58 1194.3,667.4 1187,665 1172.2,660.17 1166.3,664.95 1153,657 1148.4,654.26 1149.8,650.42 \
1145,648 1124.2,637.45 1066.7,633.43 1022.5,631.9"];
	tumor_bam -> pindel	[_draw_="c 7 -#000000 B 10 1243.73 673.53 1251 670.25 1259.73 666.85 1268 665 1286.13 660.94 1422.18 670.45 1435 657 1437.89 653.97 1437.63 \
650.08 1436 646.23 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1438.18 645.1 1432.44 640.41 1434 647.66 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1460 650.6 0 46 9 -tumor_bam ",
		label=tumor_bam,
		lp="1460,652.5",
		pos="e,1431.6,639.12 1243.7,673.53 1251,670.25 1259.7,666.85 1268,665 1286.1,660.94 1422.2,670.45 1435,657 1437.9,653.97 1437.6,650.08 \
1436,646.23"];
	tumor_bam -> varscan	[_draw_="c 7 -#000000 B 13 1210.7 673.54 1203.61 670.27 1195.09 666.87 1187 665 1153.61 657.29 1063.89 671.84 1033 657 1028.18 654.68 1029.84 \
650.28 1025 648 1015.87 643.7 739.76 635.87 615.54 632.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 615.8 630.11 608.74 632.37 615.67 635.01 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1056 650.6 0 46 9 -tumor_bam ",
		label=tumor_bam,
		lp="1056,652.5",
		pos="e,607.22,632.33 1210.7,673.54 1203.6,670.27 1195.1,666.87 1187,665 1153.6,657.29 1063.9,671.84 1033,657 1028.2,654.68 1029.8,650.28 \
1025,648 1015.9,643.7 739.76,635.87 615.54,632.55"];
	tumor_bam -> tumor_bam_readcount	[_draw_="c 7 -#000000 B 22 1243.32 673.66 1250.67 670.33 1259.57 666.84 1268 665 1314.93 654.75 1437.46 668.9 1484 657 1491.46 655.09 1601.26 \
598.73 1608 595 1641.69 576.38 1655.93 578.32 1682 550 1688.73 542.69 1684.99 537.05 1692 530 1740.49 481.23 1787.36 513.96 1830 \
460 1838.4 449.37 1841.49 434.15 1842.58 422.58 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1845.01 422.88 1842.99 415.74 1840.12 422.59 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1701.5 538.1 0 19 3 -bam ",
		label=bam,
		lp="1701.5,540",
		pos="e,1843.1,414.23 1243.3,673.66 1250.7,670.33 1259.6,666.84 1268,665 1314.9,654.75 1437.5,668.9 1484,657 1491.5,655.09 1601.3,598.73 \
1608,595 1641.7,576.38 1655.9,578.32 1682,550 1688.7,542.69 1685,537.05 1692,530 1740.5,481.23 1787.4,513.96 1830,460 1838.4,449.37 \
1841.5,434.15 1842.6,422.58"];
	annotate_coding_only -> annotate_variants	[_draw_="c 7 -#000000 B 10 2487.88 673.6 2466.47 666.39 2444 653.47 2444 631 2444 631 2444 631 2444 494 2444 472.68 2397.47 461.93 2350.71 \
456.51 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2351.03 454.08 2343.8 455.76 2350.49 458.95 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2468.5 560.6 0 49 11 -coding_only ",
		label=coding_only,
		lp="2468.5,562.5",
		pos="e,2342.3,455.59 2487.9,673.6 2466.5,666.39 2444,653.47 2444,631 2444,631 2444,631 2444,494 2444,472.68 2397.5,461.93 2350.7,456.51"];
	vep_ensembl_assembly -> annotate_variants	[_draw_="c 7 -#000000 B 13 2715.59 673.57 2696.66 668.93 2672.98 662.93 2652 657 2614.8 646.49 2569 669.66 2569 631 2569 631 2569 631 2569 \
494 2569 471.7 2442.74 460.38 2350.6 455.09 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2350.99 452.66 2343.87 454.71 2350.72 457.55 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2608.5 560.6 0 79 16 -ensembl_assembly ",
		label=ensembl_assembly,
		lp="2608.5,562.5",
		pos="e,2342.4,454.63 2715.6,673.57 2696.7,668.93 2673,662.93 2652,657 2614.8,646.49 2569,669.66 2569,631 2569,631 2569,631 2569,494 2569,\
471.7 2442.7,460.38 2350.6,455.09"];
	readcount_minimum_base_quality -> normal_bam_readcount	[_draw_="c 7 -#000000 B 22 1641.62 673.58 1650.03 669.9 1657.9 664.6 1663 657 1670.92 645.19 1681.6 644.07 1654 603 1633.78 572.92 1619.65 \
571.45 1586 558 1567.14 550.46 1554.05 565.57 1541 550 1535.29 543.19 1540.27 538.86 1541 530 1544.34 489.59 1531.91 472.62 1556 \
440 1563.67 429.62 1574.97 422.41 1586.91 417.4 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1587.72 419.71 1593.41 414.95 1585.99 415.13 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1576.5 538.1 0 71 16 -min_base_quality ",
		label=min_base_quality,
		lp="1576.5,540",
		pos="e,1594.8,414.41 1641.6,673.58 1650,669.9 1657.9,664.6 1663,657 1670.9,645.19 1681.6,644.07 1654,603 1633.8,572.92 1619.7,571.45 \
1586,558 1567.1,550.46 1554,565.57 1541,550 1535.3,543.19 1540.3,538.86 1541,530 1544.3,489.59 1531.9,472.62 1556,440 1563.7,429.62 \
1575,422.41 1586.9,417.4"];
	readcount_minimum_base_quality -> tumor_bam_readcount	[_draw_="c 7 -#000000 B 16 1650.35 673.51 1665.88 670.79 1683.17 667.76 1699 665 1729.69 659.64 1835 662.15 1835 631 1835 631 1835 631 1835 \
539 1835 503.82 1837.91 495.12 1840 460 1840.74 447.53 1841.52 433.44 1842.1 422.78 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1844.54 423.05 1842.47 415.93 1839.65 422.79 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1870.5 538.1 0 71 16 -min_base_quality ",
		label=min_base_quality,
		lp="1870.5,540",
		pos="e,1842.6,414.42 1650.4,673.51 1665.9,670.79 1683.2,667.76 1699,665 1729.7,659.64 1835,662.15 1835,631 1835,631 1835,631 1835,539 \
1835,503.82 1837.9,495.12 1840,460 1840.7,447.53 1841.5,433.44 1842.1,422.78"];
	vep_pick -> annotate_variants	[_draw_="c 7 -#000000 B 16 2098.13 673.65 2104.08 670.48 2111.2 667.13 2118 665 2142 657.5 2154.67 673.08 2174 657 2189.51 644.1 2225.42 \
504.07 2232 485 2234.61 477.43 2233.63 474.72 2238 468 2238.58 467.11 2239.22 466.23 2239.89 465.37 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2241.58 467.16 2244.55 460.37 2237.99 463.82 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2218.5 560.6 0 17 4 -pick ",
		label=pick,
		lp="2218.5,562.5",
		pos="e,2245.6,459.26 2098.1,673.65 2104.1,670.48 2111.2,667.13 2118,665 2142,657.5 2154.7,673.08 2174,657 2189.5,644.1 2225.4,504.07 \
2232,485 2234.6,477.43 2233.6,474.72 2238,468 2238.6,467.11 2239.2,466.23 2239.9,465.37"];
	filter_somatic_llr_threshold -> filter_vcf	[_draw_="c 7 -#000000 B 22 2863.81 673.51 2850.04 670.32 2833.84 666.98 2819 665 2801.8 662.7 2675.81 668.71 2663 657 2630.21 627.01 2668.64 \
597.86 2649 558 2635.53 530.65 2565.85 487.65 2553 460 2547.07 447.25 2550 442.56 2550 428.5 2550 428.5 2550 428.5 2550 269 2550 \
260.31 2550 250.63 2550 242.65 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2607.5 448.1 0 109 28 -filter_somatic_llr_threshold ",
		label=filter_somatic_llr_threshold,
		lp="2607.5,450",
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	add_vep_fields_to_table	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2636.5 0.5 2636.5 19.5 2793.5 19.5 2793.5 0.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2715 7.5 0 141 28 -add VEP annotation to report ",
		height=0.27778,
		label="add VEP annotation to report",
		pos="2715,10",
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		width=2.1806];
	vep_to_table_fields -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 10 3530.88 673.6 3509.47 666.39 3487 653.47 3487 631 3487 631 3487 631 3487 81 3487 46.9 3003.05 22.92 2801.49 14.41 ",
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		label=vep_fields,
		lp="3508,360",
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	vep_ensembl_species -> annotate_variants	[_draw_="c 7 -#000000 B 10 2199.9 673.65 2216 665.41 2236 651.12 2236 631 2236 631 2236 631 2236 494 2236 484.24 2240.29 474.31 2244.89 466.45 ",
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		label=ensembl_species,
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	variants_to_table_genotype_fields -> variants_to_table	[_draw_="c 7 -#000000 B 13 3234.65 673.55 3218.67 670.68 3200.56 667.56 3184 665 3155.42 660.59 2926 659.91 2926 631 2926 631 2926 631 2926 \
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		label=genotype_fields,
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2926,108.76 2904,95.712 2878.4,89.069"];
	vep_ensembl_version -> annotate_variants	[_draw_="c 7 -#000000 B 10 2388.28 673.68 2378.54 664.36 2365 648.3 2365 631 2365 631 2365 631 2365 494 2365 479.29 2356.3 469.46 2343.82 \
462.93 ",
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		label=ensembl_version,
		lp="2400,562.5",
		pos="e,2336.1,459.45 2388.3,673.68 2378.5,664.36 2365,648.3 2365,631 2365,631 2365,631 2365,494 2365,479.29 2356.3,469.46 2343.8,462.93"];
	cle_vcf_filter -> filter_vcf	[_draw_="c 7 -#000000 B 16 2997.84 673.65 2990.13 670.31 2980.8 666.83 2972 665 2869.25 643.62 2838.92 677.55 2736 657 2703.86 650.58 2667 \
663.77 2667 631 2667 631 2667 631 2667 269 2667 254.65 2635.59 243.62 2605.32 236.33 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2699.5 448.1 0 65 17 -do_cle_vcf_filter ",
		label=do_cle_vcf_filter,
		lp="2699.5,450",
		pos="e,2597.3,234.47 2997.8,673.65 2990.1,670.31 2980.8,666.83 2972,665 2869.3,643.62 2838.9,677.55 2736,657 2703.9,650.58 2667,663.77 \
2667,631 2667,631 2667,631 2667,269 2667,254.65 2635.6,243.62 2605.3,236.33"];
	mutect_scatter_count -> mutect	[_draw_="c 7 -#000000 B 10 1055.78 673.59 1062.96 668.81 1072.04 662.67 1080 657 1085.43 653.13 1085.85 650.56 1092 648 1104.14 642.95 1117.54 \
639.36 1130.78 636.82 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1120 650.6 0 56 13 -scatter_count ",
		label=scatter_count,
		lp="1120,652.5",
		pos="e,1139,635.38 1055.8,673.59 1063,668.81 1072,662.67 1080,657 1085.4,653.13 1085.8,650.56 1092,648 1104.1,642.95 1117.5,639.36 1130.8,\
636.82"];
	synonyms_file -> annotate_variants	[_draw_="c 7 -#000000 B 16 2613.09 673.58 2605.45 670.81 2596.87 667.73 2589 665 2549.79 651.37 2502 672.51 2502 631 2502 631 2502 631 2502 \
494 2502 457.88 2460.3 475.63 2425 468 2401.05 462.82 2374.84 459.21 2350.36 456.7 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2531 560.6 0 58 13 -synonyms_file ",
		label=synonyms_file,
		lp="2531,562.5",
		pos="e,2342.1,455.89 2613.1,673.58 2605.4,670.81 2596.9,667.73 2589,665 2549.8,651.37 2502,672.51 2502,631 2502,631 2502,631 2502,494 \
2502,457.88 2460.3,475.63 2425,468 2401,462.82 2374.8,459.21 2350.4,456.7"];
	varscan_min_var_freq -> varscan	[_draw_="c 7 -#000000 B 7 346.29 673.71 357.88 665.67 376.76 653.85 395 648 427.41 637.6 465.19 633.24 496.01 631.53 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 496.12 633.97 502.99 631.18 495.88 629.08 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 421 650.6 0 52 12 -min_var_freq ",
		label=min_var_freq,
		lp="421,652.5",
		pos="e,504.5,631.11 346.29,673.71 357.88,665.67 376.76,653.85 395,648 427.41,637.6 465.19,633.24 496.01,631.53"];
	varscan_p_value -> varscan	[_draw_="c 7 -#000000 B 7 448.27 673.7 446.34 666.1 445.03 655.01 451 648 457.31 640.58 476.24 636.39 496.33 634.03 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 496.45 636.48 503.16 633.31 495.94 631.61 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 467 650.6 0 32 7 -p_value ",
		label=p_value,
		lp="467,652.5",
		pos="e,504.66,633.15 448.27,673.7 446.34,666.1 445.03,655.01 451,648 457.31,640.58 476.24,636.39 496.33,634.03"];
	filter_minimum_depth -> filter_vcf	[_draw_="c 7 -#000000 B 19 3092.99 673.52 3081.34 670.32 3067.62 666.99 3055 665 3020.22 659.53 2740 666.2 2740 631 2740 631 2740 631 2740 \
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2783 448.1 0 88 20 -filter_minimum_depth ",
		label=filter_minimum_depth,
		lp="2783,450",
		pos="e,2613.8,233.77 3093,673.52 3081.3,670.32 3067.6,666.99 3055,665 3020.2,659.53 2740,666.2 2740,631 2740,631 2740,631 2740,471.5 \
2740,442.07 2720,323.23 2671,260 2662.5,249.09 2657.8,248.1 2645,243 2637.6,240.08 2629.8,237.65 2621.8,235.65"];
	varscan_max_normal_freq -> varscan	[_draw_="c 7 -#000000 B 7 537.73 673.53 514.66 668.16 489.36 661.41 486 657 478.97 647.78 485.39 641.83 496.73 637.99 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 497.24 640.39 503.33 636.16 495.93 635.67 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 521 650.6 0 70 15 -max_normal_freq ",
		label=max_normal_freq,
		lp="521,652.5",
		pos="e,504.79,635.76 537.73,673.53 514.66,668.16 489.36,661.41 486,657 478.97,647.78 485.39,641.83 496.73,637.99"];
	strelka_cpu_reserved -> strelka	[_draw_="c 7 -#000000 B 10 682.66 673.61 659.5 667.26 631.68 659.26 630 657 627.61 653.79 627.24 650.9 630 648 639.45 638.06 816.01 633.55 \
909.3 631.86 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 657.5 650.6 0 55 12 -cpu_reserved ",
		label=cpu_reserved,
		lp="657.5,652.5",
		pos="e,917.79,631.71 682.66,673.61 659.5,667.26 631.68,659.26 630,657 627.61,653.79 627.24,650.9 630,648 639.45,638.06 816.01,633.55 \
909.3,631.86"];
	varscan_min_coverage -> varscan	[_draw_="c 7 -#000000 B 10 113.8 673.57 124.96 670.76 137.5 667.67 149 665 183.98 656.87 192.4 652.72 228 648 321.24 635.63 430.49 632.15 \
496.42 631.23 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 496.15 633.68 503.12 631.14 496.09 628.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 257 650.6 0 58 12 -min_coverage ",
		label=min_coverage,
		lp="257,652.5",
		pos="e,504.64,631.12 113.8,673.57 124.96,670.76 137.5,667.67 149,665 183.98,656.87 192.4,652.72 228,648 321.24,635.63 430.49,632.15 496.42,\
631.23"];
	decompose	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1713 530.5 1713 549.5 1817 549.5 1817 530.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1765 537.5 0 88 16 -run vt decompose ",
		height=0.27778,
		label="run vt decompose",
		pos="1765,540",
		rects="1713,530.5,1817,549.5",
		width=1.4444];
	decompose_index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1918 485.5 1918 504.5 1980 504.5 1980 485.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1949 492.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="1949,495",
		rects="1918,485.5,1980,504.5",
		width=0.86111];
	decompose -> decompose_index	[_draw_="c 7 -#000000 B 4 1801.35 530.5 1832.69 523.18 1877.84 512.63 1909.94 505.13 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1879.5 515.6 0 13 3 -vcf ",
		label=vcf,
		lp="1879.5,517.5",
		pos="e,1918.2,503.19 1801.4,530.5 1832.7,523.18 1877.8,512.63 1909.9,505.13"];
	variants_to_table -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 4 2789.92 72.7 2775.47 60.8 2748.74 38.78 2731.42 24.52 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2733.2 22.81 2726.24 20.26 2730.09 26.6 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2750.5 30.6 0 13 3 -tsv ",
		label=tsv,
		lp="2750.5,32.5",
		pos="e,2725.1,19.294 2789.9,72.695 2775.5,60.802 2748.7,38.783 2731.4,24.522"];
	annotated_filter_bgzip	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2533.5 170.5 2533.5 189.5 2598.5 189.5 2598.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2566 177.5 0 49 9 -bgzip VCF ",
		height=0.27778,
		label="bgzip VCF",
		pos="2566,180",
		rects="2533.5,170.5,2598.5,189.5",
		width=0.90278];
	filter_vcf -> annotated_filter_bgzip	[_draw_="c 7 -#000000 B 4 2553.08 215.71 2555.03 210.47 2557.62 203.53 2559.96 197.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2562.25 198.1 2562.4 190.68 2557.66 196.39 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2565.5 200.6 0 13 4 -file ",
		label=file,
		lp="2565.5,202.5",
		pos="e,2562.9,189.27 2553.1,215.71 2555,210.47 2557.6,203.53 2560,197.24"];
	index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2255 260.5 2255 279.5 2317 279.5 2317 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2286 267.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="2286,270",
		rects="2255,260.5,2317,279.5",
		width=0.86111];
	index -> final_vcf	[_draw_="c 7 -#000000 B 10 2286.31 260.76 2286.6 252.1 2287 238.1 2287 226 2287 226 2287 226 2287 134 2287 123.57 2308.35 107.24 2325.36 \
95.87 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2326.52 98.04 2331.05 92.16 2323.85 93.94 ",
		pos="e,2332.3,91.338 2286.3,260.76 2286.6,252.1 2287,238.1 2287,226 2287,226 2287,226 2287,134 2287,123.57 2308.4,107.24 2325.4,95.872"];
	index -> filter_vcf	[_draw_="c 7 -#000000 B 7 2290.29 260.64 2293.87 254.61 2299.59 246.86 2307 243 2321.88 235.24 2411.71 230.57 2477.84 228.14 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2477.76 230.59 2484.67 227.89 2477.59 225.7 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2313.5 245.6 0 13 3 -vcf ",
		label=vcf,
		lp="2313.5,247.5",
		pos="e,2486.2,227.84 2290.3,260.64 2293.9,254.61 2299.6,246.86 2307,243 2321.9,235.24 2411.7,230.57 2477.8,228.14"];
	annotated_filter_index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2560 125.5 2560 144.5 2622 144.5 2622 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2591 132.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="2591,135",
		rects="2560,125.5,2622,144.5",
		width=0.86111];
	annotated_filter_bgzip -> annotated_filter_index	[_draw_="c 7 -#000000 B 4 2570.82 170.71 2574 165.24 2578.27 157.9 2582.06 151.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2584.03 152.86 2585.43 145.57 2579.8 150.39 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2586.5 155.6 0 13 3 -vcf ",
		label=vcf,
		lp="2586.5,157.5",
		pos="e,2586.2,144.27 2570.8,170.71 2574,165.24 2578.3,157.9 2582.1,151.38"];
	annotate_variants -> vep_summary	[_draw_="c 7 -#000000 B 22 2188.47 440.51 2171.61 438.07 2153.6 435.2 2137 432 2120.38 428.8 2116.62 426.21 2100 423 2097.46 422.51 1732.9 \
371.76 1731 370 1720.48 360.25 1724 352.84 1724 338.5 1724 338.5 1724 338.5 1724 134 1724 78.43 2168.62 111.45 2223 100 2229.57 \
98.62 2236.46 96.52 2242.87 94.26 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2243.56 96.62 2249.27 91.89 2241.86 92.03 ",
		pos="e,2250.7,91.362 2188.5,440.51 2171.6,438.07 2153.6,435.2 2137,432 2120.4,428.8 2116.6,426.21 2100,423 2097.5,422.51 1732.9,371.76 \
1731,370 1720.5,360.25 1724,352.84 1724,338.5 1724,338.5 1724,338.5 1724,134 1724,78.427 2168.6,111.45 2223,100 2229.6,98.617 2236.5,\
96.518 2242.9,94.262"];
	annotate_variants -> normal_bam_readcount	[_draw_="c 7 -#000000 B 10 2169.58 443.22 2153.43 442.14 2136.7 441.03 2121 440 2066.34 436.4 2052.65 435.78 1998 432 1895.81 424.93 1777.12 \
416.12 1706.14 410.78 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1706.4 408.34 1699.23 410.26 1706.03 413.23 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2004.5 425.6 0 13 3 -vcf ",
		label=vcf,
		lp="2004.5,427.5",
		pos="e,1697.7,410.15 2169.6,443.22 2153.4,442.14 2136.7,441.03 2121,440 2066.3,436.4 2052.7,435.78 1998,432 1895.8,424.93 1777.1,416.12 \
1706.1,410.78"];
	annotate_variants -> tumor_bam_readcount	[_draw_="c 7 -#000000 B 4 2174.4 440.5 2095.52 432.29 1977.68 420.02 1905.84 412.54 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1906.46 410.14 1899.24 411.86 1905.95 415.02 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2092.5 425.6 0 13 3 -vcf ",
		label=vcf,
		lp="2092.5,427.5",
		pos="e,1897.7,411.7 2174.4,440.5 2095.5,432.29 1977.7,420.02 1905.8,412.54"];
	add_tumor_bam_readcount_to_vcf	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 2001 350.5 2001 369.5 2245 369.5 2245 350.5 ",
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		fillcolor="#F3CEA1",
		height=0.27778,
		label="Add snv and indel bam-readcount files to a vcf",
		pos="2123,360",
		rects="2001,350.5,2245,369.5",
		width=3.3889];
	annotate_variants -> add_tumor_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 2198.61 440.55 2168.73 434.9 2136.48 426.4 2127 415 2118.48 404.75 2118.17 389.28 2119.59 377.52 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2121.96 378.2 2120.67 370.89 2117.13 377.41 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2133.5 403.1 0 13 3 -vcf ",
		label=vcf,
		lp="2133.5,405",
		pos="e,2120.9,369.4 2198.6,440.55 2168.7,434.9 2136.5,426.4 2127,415 2118.5,404.75 2118.2,389.28 2119.6,377.52"];
	add_normal_bam_readcount_to_vcf	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 1832 305.5 1832 324.5 2076 324.5 2076 305.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1954 312.5 0 228 46 -Add snv and indel bam-readcount files to a vcf ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="Add snv and indel bam-readcount files to a vcf",
		pos="1954,315",
		rects="1832,305.5,2076,324.5",
		width=3.3889];
	add_normal_bam_readcount_to_vcf -> index	[_draw_="c 7 -#000000 B 4 2019.59 305.5 2087.36 296.73 2190.88 283.32 2246.83 276.07 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2246.93 278.53 2253.56 275.2 2246.3 273.67 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2155.5 290.6 0 13 3 -vcf ",
		label=vcf,
		lp="2155.5,292.5",
		pos="e,2255.1,275.01 2019.6,305.5 2087.4,296.73 2190.9,283.32 2246.8,276.07"];
	combine -> decompose	[_draw_="c 7 -#000000 B 4 1372.25 579.45 1453.67 574.24 1585.84 564.63 1704.96 550.46 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1704.99 552.93 1711.65 549.66 1704.41 548.06 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1635.5 560.6 0 13 3 -vcf ",
		label=vcf,
		lp="1635.5,562.5",
		pos="e,1713.2,549.48 1372.2,579.45 1453.7,574.24 1585.8,564.63 1705,550.46"];
	mutect -> mutect_filtered_vcf	[_draw_="c 7 -#000000 B 10 1175 620.63 1158.5 614.25 1142 603.5 1142 586 1142 586 1142 586 1142 134 1142 117.03 1127.75 104.13 1113.76 95.54 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1115.16 93.52 1107.86 92.2 1112.74 97.78 ",
		pos="e,1106.5,91.449 1175,620.63 1158.5,614.25 1142,603.5 1142,586 1142,586 1142,586 1142,134 1142,117.03 1127.8,104.13 1113.8,95.542"];
	mutect -> mutect_unfiltered_vcf	[_draw_="c 7 -#000000 B 10 1208 620.76 1208 612.1 1208 598.09 1208 586 1208 586 1208 586 1208 134 1208 122.59 1208 109.75 1208 99.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1210.45 99.82 1208 92.82 1205.55 99.82 ",
		pos="e,1208,91.304 1208,620.76 1208,612.1 1208,598.09 1208,586 1208,586 1208,586 1208,134 1208,122.59 1208,109.75 1208,99.808"];
	mutect -> combine	[_draw_="c 7 -#000000 B 7 1245.81 620.58 1252.75 618.3 1259.77 615.47 1266 612 1271.69 608.83 1277.2 604.37 1281.86 600.04 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1283.29 602.07 1286.55 595.4 1279.85 598.58 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1300.5 605.6 0 45 10 -mutect_vcf ",
		label=mutect_vcf,
		lp="1300.5,607.5",
		pos="e,1287.6,594.34 1245.8,620.58 1252.8,618.3 1259.8,615.47 1266,612 1271.7,608.83 1277.2,604.37 1281.9,600.04"];
	normal_bam_readcount -> normal_indel_bam_readcount_tsv	[_draw_="c 7 -#000000 B 10 1650.53 395.8 1657.24 387.62 1666 374.38 1666 361 1666 361 1666 361 1666 134 1666 113.82 1681.25 101.59 1700.49 \
94.19 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1701.09 96.57 1706.91 91.98 1699.49 91.94 ",
		pos="e,1708.3,91.486 1650.5,395.8 1657.2,387.62 1666,374.38 1666,361 1666,361 1666,361 1666,134 1666,113.82 1681.2,101.59 1700.5,94.185"];
	normal_bam_readcount -> normal_snv_bam_readcount_tsv	[_draw_="c 7 -#000000 B 10 1642.39 395.76 1641.8 387.11 1641 373.11 1641 361 1641 361 1641 361 1641 134 1641 118.25 1628.76 105.18 1616.9 \
96.21 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1618.44 94.3 1611.3 92.29 1615.63 98.31 ",
		pos="e,1610.1,91.417 1642.4,395.76 1641.8,387.11 1641,373.11 1641,361 1641,361 1641,361 1641,134 1641,118.25 1628.8,105.18 1616.9,96.211"];
	normal_bam_readcount -> add_normal_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 10 1697.9 399.09 1764.66 392.7 1870.29 381.02 1885 370 1892.95 364.04 1888.18 357.23 1895 350 1903.48 341 1914.88 \
333.68 1925.4 328.17 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1926.31 330.45 1931.5 325.15 1924.14 326.06 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1947 358.1 0 104 23 -indel_bam_readcount_tsv ",
		label=indel_bam_readcount_tsv,
		lp="1947,360",
		pos="e,1932.9,324.47 1697.9,399.09 1764.7,392.7 1870.3,381.02 1885,370 1893,364.04 1888.2,357.23 1895,350 1903.5,341 1914.9,333.68 1925.4,\
328.17"];
	normal_bam_readcount -> add_normal_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 10 1697.75 402.25 1725.15 398.67 1757.06 390.01 1779 370 1785.96 363.65 1778.9 356.19 1786 350 1798.62 339 1832.58 \
331.11 1866.7 325.71 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1866.85 328.16 1873.4 324.69 1866.11 323.32 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1835 358.1 0 98 21 -snv_bam_readcount_tsv ",
		label=snv_bam_readcount_tsv,
		lp="1835,360",
		pos="e,1874.9,324.46 1697.7,402.25 1725.1,398.67 1757.1,390.01 1779,370 1786,363.65 1778.9,356.19 1786,350 1798.6,339 1832.6,331.11 1866.7,\
325.71"];
	decompose_index -> annotate_variants	[_draw_="c 7 -#000000 B 4 1979.84 489.68 2028.03 482.93 2122.39 469.71 2187.28 460.63 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2187.35 463.09 2193.94 459.69 2186.67 458.24 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2135.5 470.6 0 13 3 -vcf ",
		label=vcf,
		lp="2135.5,472.5",
		pos="e,2195.4,459.48 1979.8,489.68 2028,482.93 2122.4,469.71 2187.3,460.63"];
	strelka -> strelka_filtered_vcf	[_draw_="c 7 -#000000 B 13 917.67 625.69 896.09 623.25 873.78 619.08 866 612 857.15 603.95 859 597.97 859 586 859 586 859 586 859 134 859 \
122.13 855.65 109.17 852.35 99.28 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 854.74 98.68 850.06 92.92 850.13 100.33 ",
		pos="e,849.55,91.494 917.67,625.69 896.09,623.25 873.78,619.08 866,612 857.15,603.95 859,597.97 859,586 859,586 859,586 859,134 859,122.13 \
855.65,109.17 852.35,99.284"];
	strelka -> strelka_unfiltered_vcf	[_draw_="c 7 -#000000 B 10 966 620.76 966 612.1 966 598.09 966 586 966 586 966 586 966 134 966 122.59 966 109.75 966 99.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 968.45 99.82 966 92.82 963.55 99.82 ",
		pos="e,966,91.304 966,620.76 966,612.1 966,598.09 966,586 966,586 966,586 966,134 966,122.59 966,109.75 966,99.808"];
	strelka -> combine	[_draw_="c 7 -#000000 B 4 1014.19 622.7 1068.85 615.56 1158.59 603.83 1221.89 595.56 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1222.12 598 1228.74 594.66 1221.49 593.14 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1181 605.6 0 44 11 -strelka_vcf ",
		label=strelka_vcf,
		lp="1181,607.5",
		pos="e,1230.2,594.46 1014.2,622.7 1068.9,615.56 1158.6,603.83 1221.9,595.56"];
	pindel -> pindel_filtered_vcf	[_draw_="c 7 -#000000 B 10 1420.2 620.63 1416.69 612.1 1412 598.4 1412 586 1412 586 1412 586 1412 134 1412 120.8 1381.48 105.11 1357.02 94.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1358.13 92.46 1350.73 92.03 1356.25 96.98 ",
		pos="e,1349.3,91.447 1420.2,620.63 1416.7,612.1 1412,598.4 1412,586 1412,586 1412,586 1412,134 1412,120.8 1381.5,105.11 1357,94.649"];
	pindel -> pindel_unfiltered_vcf	[_draw_="c 7 -#000000 B 10 1427.48 620.6 1430.7 612.04 1435 598.33 1435 586 1435 586 1435 586 1435 134 1435 122.3 1437.33 109.31 1439.61 \
99.37 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1441.96 100.08 1441.27 92.69 1437.21 98.9 ",
		pos="e,1441.6,91.225 1427.5,620.6 1430.7,612.04 1435,598.33 1435,586 1435,586 1435,586 1435,134 1435,122.3 1437.3,109.31 1439.6,99.372"];
	pindel -> combine	[_draw_="c 7 -#000000 B 7 1393.78 620.55 1384.8 617.93 1374.97 614.95 1366 612 1352.4 607.52 1337.49 602.14 1324.87 597.43 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1325.77 595.15 1318.35 594.99 1324.05 599.74 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1387 605.6 0 42 10 -pindel_vcf ",
		label=pindel_vcf,
		lp="1387,607.5",
		pos="e,1316.9,594.46 1393.8,620.55 1384.8,617.93 1375,614.95 1366,612 1352.4,607.52 1337.5,602.14 1324.9,597.43"];
	varscan -> varscan_unfiltered_vcf	[_draw_="c 7 -#000000 B 10 553.15 620.54 550.52 611.95 547 598.2 547 586 547 586 547 586 547 134 547 122.42 545.71 109.43 544.44 99.46 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 546.9 99.38 543.52 92.78 542.04 100.05 ",
		pos="e,543.31,91.279 553.15,620.54 550.52,611.95 547,598.2 547,586 547,586 547,586 547,134 547,122.42 545.71,109.43 544.44,99.461"];
	varscan -> varscan_filtered_vcf	[_draw_="c 7 -#000000 B 10 583.43 620.58 598.83 613.97 615 602.98 615 586 615 586 615 586 615 134 615 117.46 628.57 104.51 641.85 95.8 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 643.09 97.91 647.81 92.18 640.55 93.72 ",
		pos="e,649.1,91.399 583.43,620.58 598.83,613.97 615,602.98 615,586 615,586 615,586 615,134 615,117.46 628.57,104.51 641.85,95.799"];
	varscan -> combine	[_draw_="c 7 -#000000 B 4 607.38 626.01 732.63 618.72 1054.74 599.98 1209.5 590.98 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1209.29 593.44 1216.13 590.59 1209 588.55 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1015.5 605.6 0 49 11 -varscan_vcf ",
		label=varscan_vcf,
		lp="1015.5,607.5",
		pos="e,1217.6,590.5 607.38,626.01 732.63,618.72 1054.7,599.98 1209.5,590.98"];
	annotated_filter_index -> final_filtered_vcf	[_draw_="c 7 -#000000 B 4 2564.08 125.58 2536.36 116.9 2493.04 103.35 2462.75 93.87 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2463.81 91.64 2456.4 91.89 2462.35 96.31 ",
		pos="e,2455,91.434 2564.1,125.58 2536.4,116.9 2493,103.35 2462.7,93.871"];
	annotated_filter_index -> variants_to_table	[_draw_="c 7 -#000000 B 4 2621.84 126.47 2657.64 117.74 2716.9 103.28 2757.16 93.45 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2757.51 95.89 2763.73 91.85 2756.35 91.13 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2701.5 110.6 0 13 3 -vcf ",
		label=vcf,
		lp="2701.5,112.5",
		pos="e,2765.2,91.492 2621.8,126.47 2657.6,117.74 2716.9,103.28 2757.2,93.453"];
	annotated_filter_index -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 4 2599.52 125.55 2620.51 104.73 2674.84 50.83 2700.79 25.09 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2702.42 26.92 2705.67 20.26 2698.97 23.45 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2685.5 80.1 0 13 3 -vcf ",
		label=vcf,
		lp="2685.5,82",
		pos="e,2706.7,19.19 2599.5,125.55 2620.5,104.73 2674.8,50.833 2700.8,25.09"];
	add_vep_fields_to_table -> final_tsv	[_draw_="c 7 -#000000 B 7 2636.62 10.66 2286.17 9.37 876.31 6.57 791 45 781.29 49.37 773.17 58.12 767.41 65.89 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 765.6 64.2 763.67 71.36 769.64 66.97 ",
		pos="e,762.81,72.606 2636.6,10.661 2286.2,9.365 876.31,6.5682 791,45 781.29,49.373 773.17,58.116 767.41,65.891"];
	tumor_bam_readcount -> tumor_snv_bam_readcount_tsv	[_draw_="c 7 -#000000 B 19 1788.16 402.21 1753.66 400.21 1712.94 395.97 1698 387 1685.95 379.76 1680 375.05 1680 361 1680 361 1680 361 1680 \
134 1680 119.95 1685.71 114.81 1698 108 1714.64 98.78 1850.11 102.23 1869 100 1882.97 98.35 1898.04 95.77 1911.74 93.13 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1912.2 95.53 1918.59 91.77 1911.24 90.73 ",
		pos="e,1920.1,91.475 1788.2,402.21 1753.7,400.21 1712.9,395.97 1698,387 1686,379.76 1680,375.05 1680,361 1680,361 1680,361 1680,134 1680,\
119.95 1685.7,114.81 1698,108 1714.6,98.781 1850.1,102.23 1869,100 1883,98.347 1898,95.774 1911.7,93.126"];
	tumor_bam_readcount -> tumor_indel_bam_readcount_tsv	[_draw_="c 7 -#000000 B 16 1788.08 397.48 1748.49 391.2 1702 379.81 1702 361 1702 361 1702 361 1702 134 1702 119.95 1707.63 114.68 1720 108 \
1735.8 99.47 2025.15 101.86 2043 100 2057.86 98.45 2073.91 95.82 2088.38 93.09 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2088.81 95.5 2095.22 91.76 2087.88 90.69 ",
		pos="e,2096.7,91.476 1788.1,397.48 1748.5,391.2 1702,379.81 1702,361 1702,361 1702,361 1702,134 1702,119.95 1707.6,114.68 1720,108 1735.8,\
99.473 2025.1,101.86 2043,100 2057.9,98.453 2073.9,95.824 2088.4,93.09"];
	tumor_bam_readcount -> add_tumor_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 10 1897.67 401.33 1936.58 398.85 1985.16 394.4 2004 387 2010.2 384.56 2009.86 380.6 2016 378 2021.85 375.52 2028.01 \
373.41 2034.31 371.59 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2034.74 374.01 2040.88 369.85 2033.48 369.28 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2068 380.6 0 104 23 -indel_bam_readcount_tsv ",
		label=indel_bam_readcount_tsv,
		lp="2068,382.5",
		pos="e,2042.3,369.46 1897.7,401.33 1936.6,398.85 1985.2,394.4 2004,387 2010.2,384.56 2009.9,380.6 2016,378 2021.8,375.52 2028,373.41 \
2034.3,371.59"];
	tumor_bam_readcount -> add_tumor_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 10 1879.37 395.53 1885.52 393.28 1891.64 390.47 1897 387 1901.49 384.09 1900.21 380.38 1905 378 1906.23 377.39 1951.14 \
373.84 1999.87 370.14 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2000.05 372.58 2006.85 369.61 1999.68 367.7 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1954 380.6 0 98 21 -snv_bam_readcount_tsv ",
		label=snv_bam_readcount_tsv,
		lp="1954,382.5",
		pos="e,2008.4,369.5 1879.4,395.53 1885.5,393.28 1891.6,390.47 1897,387 1901.5,384.09 1900.2,380.38 1905,378 1906.2,377.39 1951.1,373.84 \
1999.9,370.14"];
	add_tumor_bam_readcount_to_vcf -> add_normal_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 4 2089.61 350.5 2062.53 343.61 2024.23 333.87 1995.23 326.49 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1996.17 324.2 1988.79 324.85 1994.97 328.95 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2059.5 335.6 0 13 3 -vcf ",
		label=vcf,
		lp="2059.5,337.5",
		pos="e,1987.3,324.48 2089.6,350.5 2062.5,343.61 2024.2,333.87 1995.2,326.49"];
	default1	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 2685 260.5 2685 279.5 2793 279.5 2793 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2739 267.5 0 92 14 -\"NORMAL,TUMOR\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"NORMAL,TUMOR\"",
		pos="2739,270",
		rects="2685,260.5,2793,279.5",
		width=1.5];
	default1 -> filter_vcf	[_draw_="c 7 -#000000 B 7 2723.99 260.65 2712.77 254.77 2696.85 247.24 2682 243 2662.95 237.56 2641.85 233.86 2622.21 231.34 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2622.64 228.93 2615.4 230.51 2622.05 233.79 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2737 245.6 0 62 12 -sample_names ",
		label=sample_names,
		lp="2737,247.5",
		pos="e,2613.9,230.33 2724,260.65 2712.8,254.77 2696.9,247.24 2682,243 2662.9,237.56 2641.8,233.86 2622.2,231.34"];
	default2	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 2249 350.5 2249 369.5 2317 369.5 2317 350.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2283 357.5 0 52 8 -\"NORMAL\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"NORMAL\"",
		pos="2283,360",
		rects="2249,350.5,2317,369.5",
		width=0.94444];
	default2 -> add_normal_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 2249.06 350.76 2247.69 350.49 2246.34 350.24 2245 350 2183.89 339.23 2114.95 331.01 2059.51 325.34 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2059.8 322.91 2052.58 324.64 2059.3 327.79 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2218 335.6 0 58 11 -sample_name ",
		label=sample_name,
		lp="2218,337.5",
		pos="e,2051.1,324.49 2249.1,350.76 2247.7,350.49 2246.3,350.24 2245,350 2183.9,339.23 2114.9,331.01 2059.5,325.34"];
	default3	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 1731.5 350.5 1731.5 369.5 1778.5 369.5 1778.5 350.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1755 357.5 0 31 5 -\"DNA\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"DNA\"",
		pos="1755,360",
		rects="1731.5,350.5,1778.5,369.5",
		width=0.65278];
	default3 -> add_normal_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 1750.61 350.72 1748.27 345.04 1746.67 337.71 1751 333 1756.86 326.63 1787.89 322.65 1824.01 320.16 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1823.94 322.62 1830.77 319.72 1823.62 317.73 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1771.5 335.6 0 41 9 -data_type ",
		label=data_type,
		lp="1771.5,337.5",
		pos="e,1832.3,319.62 1750.6,350.72 1748.3,345.04 1746.7,337.71 1751,333 1756.9,326.63 1787.9,322.65 1824,320.16"];
	default4	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 1556 440.5 1556 459.5 1624 459.5 1624 440.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1590 447.5 0 52 8 -\"NORMAL\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"NORMAL\"",
		pos="1590,450",
		rects="1556,440.5,1624,459.5",
		width=0.94444];
	default4 -> normal_bam_readcount	[_draw_="c 7 -#000000 B 7 1589.93 440.81 1590.31 435.17 1591.7 427.85 1596 423 1597.41 421.41 1598.98 419.97 1600.67 418.66 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1601.76 420.87 1606.38 415.06 1599.15 416.72 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1611.5 425.6 0 31 6 -sample ",
		label=sample,
		lp="1611.5,427.5",
		pos="e,1607.7,414.26 1589.9,440.81 1590.3,435.17 1591.7,427.85 1596,423 1597.4,421.41 1599,419.97 1600.7,418.66"];
	default5	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 1768 440.5 1768 459.5 1830 459.5 1830 440.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1799 447.5 0 46 7 -\"TUMOR\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"TUMOR\"",
		pos="1799,450",
		rects="1768,440.5,1830,459.5",
		width=0.86111];
	default5 -> tumor_bam_readcount	[_draw_="c 7 -#000000 B 7 1797.93 440.95 1797.63 435.38 1798.17 428.08 1802 423 1803.01 421.66 1804.14 420.43 1805.37 419.29 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1806.72 421.34 1810.96 415.26 1803.85 417.37 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1817.5 425.6 0 31 6 -sample ",
		label=sample,
		lp="1817.5,427.5",
		pos="e,1812.2,414.37 1797.9,440.95 1797.6,435.38 1798.2,428.08 1802,423 1803,421.66 1804.1,420.43 1805.4,419.29"];
	default6	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 2141.5 395.5 2141.5 414.5 2188.5 414.5 2188.5 395.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2165 402.5 0 31 5 -\"DNA\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"DNA\"",
		pos="2165,405",
		rects="2141.5,395.5,2188.5,414.5",
		width=0.65278];
	default6 -> add_tumor_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 4 2156.9 395.71 2151.21 389.88 2143.45 381.93 2136.79 375.12 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2138.77 373.64 2132.13 370.35 2135.27 377.07 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2167.5 380.6 0 41 9 -data_type ",
		label=data_type,
		lp="2167.5,382.5",
		pos="e,2131.1,369.27 2156.9,395.71 2151.2,389.88 2143.4,381.93 2136.8,375.12"];
	default7	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 2193 395.5 2193 414.5 2255 414.5 2255 395.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2224 402.5 0 46 7 -\"TUMOR\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"TUMOR\"",
		pos="2224,405",
		rects="2193,395.5,2255,414.5",
		width=0.86111];
	default7 -> add_tumor_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 2214.84 395.64 2208.13 389.91 2198.56 382.57 2189 378 2184.12 375.67 2178.88 373.63 2173.57 371.85 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2174.61 369.61 2167.2 369.88 2173.16 374.29 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2232 380.6 0 58 11 -sample_name ",
		label=sample_name,
		lp="2232,382.5",
		pos="e,2165.8,369.43 2214.8,395.64 2208.1,389.91 2198.6,382.57 2189,378 2184.1,375.67 2178.9,373.63 2173.6,371.85"];
}