digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 368 2312 368 2312 0 ",
		bb="0,0,2312,368",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
	];
	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 352 305 352 360 1649 360 1649 305 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 402 348 0 84 15 -Workflow Inputs ",
			bb="352,305,1649,360",
			label="Workflow Inputs",
			lheight=0.15,
			lp="402,350.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		threads	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1097 313.5 1097 332.5 1205 332.5 1205 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1151 320.5 0 92 17 -Number of threads ",
			fillcolor="#94DDF4",
			height=0.27778,
			label="Number of threads",
			pos="1151,323",
			rects="1097,313.5,1205,332.5",
			width=1.5];
		strain2_chain_file	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 360.5 313.5 360.5 332.5 461.5 332.5 461.5 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 411 320.5 0 85 20 -II strain chain file ",
			fillcolor="#94DDF4",
			height=0.27778,
			label="II strain chain file",
			pos="411,323",
			rects="360.5,313.5,461.5,332.5",
			width=1.4028];
		strain1_chain_file	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1319 313.5 1319 332.5 1417 332.5 1417 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1368 320.5 0 82 19 -I strain chain file ",
			fillcolor="#94DDF4",
			height=0.27778,
			label="I strain chain file",
			pos="1368,323",
			rects="1319,313.5,1417,332.5",
			width=1.3611];
		reference_star_indices_folder	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1421.5 313.5 1421.5 332.5 1640.5 332.5 1640.5 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1531 320.5 0 203 40 -STAR indices folder for reference genome ",
			fillcolor="#94DDF4",
			height=0.27778,
			label="STAR indices folder for reference genome",
			pos="1531,323",
			rects="1421.5,313.5,1640.5,332.5",
			width=3.0417];
		fastq_files	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1209 313.5 1209 332.5 1315 332.5 1315 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1262 320.5 0 90 19 -Input FASTQ file(s) ",
			fillcolor="#94DDF4",
			height=0.27778,
			label="Input FASTQ file(s)",
			pos="1262,323",
			rects="1209,313.5,1315,332.5",
			width=1.4722];
		strain2	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 677 313.5 677 332.5 761 332.5 761 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 719 320.5 0 68 14 -II strain name ",
			fillcolor="#94DDF4",
			height=0.27778,
			label="II strain name",
			pos="719,323",
			rects="677,313.5,761,332.5",
			width=1.1667];
		strain1	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 765.5 313.5 765.5 332.5 846.5 332.5 846.5 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 806 320.5 0 65 13 -I strain name ",
			fillcolor="#94DDF4",
			height=0.27778,
			label="I strain name",
			pos="806,323",
			rects="765.5,313.5,846.5,332.5",
			width=1.125];
		insilico_star_indices_folder	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 465.5 313.5 465.5 332.5 672.5 332.5 672.5 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 569 320.5 0 191 39 -STAR indices folder for insilico genome ",
			fillcolor="#94DDF4",
			height=0.27778,
			label="STAR indices folder for insilico genome",
			pos="569,323",
			rects="465.5,313.5,672.5,332.5",
			width=2.875];
		reference_chrom_length_file	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 851 313.5 851 332.5 1093 332.5 1093 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 972 320.5 0 226 43 -Chromosome length file for reference genome ",
			fillcolor="#94DDF4",
			height=0.27778,
			label="Chromosome length file for reference genome",
			pos="972,323",
			rects="851,313.5,1093,332.5",
			width=3.3611];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 8 8 63 2304 63 2304 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 62 15 0 92 16 -Workflow Outputs ",
			bb="8,8,2304,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="62,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		strain2_bigwig	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 780 35.5 780 54.5 888 54.5 888 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 834 42.5 0 92 21 -II strain bigWig file ",
			fillcolor="#94DDF4",
			height=0.27778,
			label="II strain bigWig file",
			pos="834,45",
			rects="780,35.5,888,54.5",
			width=1.5];
		strain2_bambai_pair	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 892.5 35.5 892.5 54.5 1005.5 54.5 1005.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 949 42.5 0 97 20 -II strain output BAM ",
			fillcolor="#94DDF4",
			height=0.27778,
			label="II strain output BAM",
			pos="949,45",
			rects="892.5,35.5,1005.5,54.5",
			width=1.5694];
		reference_bambai_pair	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1233 35.5 1233 54.5 1359 54.5 1359 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1296 42.5 0 110 20 -Reference output BAM ",
			fillcolor="#94DDF4",
			height=0.27778,
			label="Reference output BAM",
			pos="1296,45",
			rects="1233,35.5,1359,54.5",
			width=1.75];
		reference_star_stdout_log	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1489 35.5 1489 54.5 1691 54.5 1691 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1590 42.5 0 186 36 -STAR stdout log for reference genome ",
			fillcolor="#94DDF4",
			height=0.27778,
			label="STAR stdout log for reference genome",
			pos="1590,45",
			rects="1489,35.5,1691,54.5",
			width=2.8056];
		reference_star_final_log	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1695 35.5 1695 54.5 1887 54.5 1887 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1791 42.5 0 176 35 -STAR final log for reference genome ",
			fillcolor="#94DDF4",
			height=0.27778,
			label="STAR final log for reference genome",
			pos="1791,45",
			rects="1695,35.5,1887,54.5",
			width=2.6667];
		strain1_bigwig	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1009.5 35.5 1009.5 54.5 1114.5 54.5 1114.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1062 42.5 0 89 20 -I strain bigWig file ",
			fillcolor="#94DDF4",
			height=0.27778,
			label="I strain bigWig file",
			pos="1062,45",
			rects="1009.5,35.5,1114.5,54.5",
			width=1.4583];
		reference_star_out_log	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1891.5 35.5 1891.5 54.5 2078.5 54.5 2078.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1985 42.5 0 171 33 -STAR log out for reference genome ",
			fillcolor="#94DDF4",
			height=0.27778,
			label="STAR log out for reference genome",
			pos="1985,45",
			rects="1891.5,35.5,2078.5,54.5",
			width=2.5972];
		insilico_star_out_log	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 200.5 35.5 200.5 54.5 375.5 54.5 375.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 288 42.5 0 159 32 -STAR log out for insilico genome ",
			fillcolor="#94DDF4",
			height=0.27778,
			label="STAR log out for insilico genome",
			pos="288,45",
			rects="200.5,35.5,375.5,54.5",
			width=2.4306];
		insilico_star_stdout_log	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 380 35.5 380 54.5 570 54.5 570 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 475 42.5 0 174 35 -STAR stdout log for insilico genome ",
			fillcolor="#94DDF4",
			height=0.27778,
			label="STAR stdout log for insilico genome",
			pos="475,45",
			rects="380,35.5,570,54.5",
			width=2.6389];
		reference_star_progress_log	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 2082.5 35.5 2082.5 54.5 2295.5 54.5 2295.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2189 42.5 0 197 38 -STAR progress log for reference genome ",
			fillcolor="#94DDF4",
			height=0.27778,
			label="STAR progress log for reference genome",
			pos="2189,45",
			rects="2082.5,35.5,2295.5,54.5",
			width=2.9583];
		strain1_bambai_pair	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1119 35.5 1119 54.5 1229 54.5 1229 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1174 42.5 0 94 19 -I strain output BAM ",
			fillcolor="#94DDF4",
			height=0.27778,
			label="I strain output BAM",
			pos="1174,45",
			rects="1119,35.5,1229,54.5",
			width=1.5278];
		insilico_star_progress_log	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 574.5 35.5 574.5 54.5 775.5 54.5 775.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 675 42.5 0 185 37 -STAR progress log for insilico genome ",
			fillcolor="#94DDF4",
			height=0.27778,
			label="STAR progress log for insilico genome",
			pos="675,45",
			rects="574.5,35.5,775.5,54.5",
			width=2.7917];
		insilico_star_final_log	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16 35.5 16 54.5 196 54.5 196 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 106 42.5 0 164 34 -STAR final log for insilico genome ",
			fillcolor="#94DDF4",
			height=0.27778,
			label="STAR final log for insilico genome",
			pos="106,45",
			rects="16,35.5,196,54.5",
			width=2.5];
		reference_bigwig	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1363.5 35.5 1363.5 54.5 1484.5 54.5 1484.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1424 42.5 0 105 21 -Reference bigWig file ",
			fillcolor="#94DDF4",
			height=0.27778,
			label="Reference bigWig file",
			pos="1424,45",
			rects="1363.5,35.5,1484.5,54.5",
			width=1.6806];
	}
	reference_star_aligner	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1591 260.5 1591 279.5 1717 279.5 1717 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1654 267.5 0 110 22 -reference_star_aligner ",
		height=0.27778,
		label=reference_star_aligner,
		pos="1654,270",
		rects="1591,260.5,1717,279.5",
		width=1.75];
	threads -> reference_star_aligner	[_draw_="c 7 -#000000 B 7 1175.56 313.57 1185.79 310.38 1197.85 307.04 1209 305 1227.05 301.7 1461.96 284.67 1582.98 276.04 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1582.82 278.5 1589.62 275.56 1582.47 273.62 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1430 290.6 0 32 7 -threads ",
		label=threads,
		lp="1430,292.5",
		pos="e,1591.1,275.46 1175.6,313.57 1185.8,310.38 1197.9,307.04 1209,305 1227,301.7 1462,284.67 1583,276.04"];
	insilico_star_aligner	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 512 260.5 512 279.5 626 279.5 626 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 569 267.5 0 98 21 -insilico_star_aligner ",
		height=0.27778,
		label=insilico_star_aligner,
		pos="569,270",
		rects="512,260.5,626,279.5",
		width=1.5833];
	threads -> insilico_star_aligner	[_draw_="c 7 -#000000 B 13 1127.04 313.55 1116.7 310.27 1104.39 306.87 1093 305 1006.97 290.86 983.95 303.37 897 297 859.11 294.22 849.84 \
291.33 812 288 751.87 282.71 683.24 278.04 634.29 274.93 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 634.65 272.5 627.51 274.51 634.34 277.39 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 913 290.6 0 32 7 -threads ",
		label=threads,
		lp="913,292.5",
		pos="e,626,274.41 1127,313.55 1116.7,310.27 1104.4,306.87 1093,305 1007,290.86 983.95,303.37 897,297 859.11,294.22 849.84,291.33 812,\
288 751.87,282.71 683.24,278.04 634.29,274.93"];
	reference_samtools_sort	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1385.5 215.5 1385.5 234.5 1522.5 234.5 1522.5 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1454 222.5 0 121 23 -reference_samtools_sort ",
		height=0.27778,
		label=reference_samtools_sort,
		pos="1454,225",
		rects="1385.5,215.5,1522.5,234.5",
		width=1.9028];
	threads -> reference_samtools_sort	[_draw_="c 7 -#000000 B 16 1177.08 313.54 1187 310.54 1198.45 307.33 1209 305 1281.86 288.91 1310.94 318.26 1375 280 1384.54 274.3 1380.44 \
265.66 1390 260 1411.63 247.19 1426.89 268.33 1446 252 1448.87 249.55 1450.72 246.1 1451.92 242.51 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1454.3 243.12 1453.37 235.76 1449.51 242.09 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1406 268.1 0 32 7 -threads ",
		label=threads,
		lp="1406,270",
		pos="e,1453.7,234.28 1177.1,313.54 1187,310.54 1198.4,307.33 1209,305 1281.9,288.91 1310.9,318.26 1375,280 1384.5,274.3 1380.4,265.66 \
1390,260 1411.6,247.19 1426.9,268.33 1446,252 1448.9,249.55 1450.7,246.1 1451.9,242.51"];
	strain1_samtools_sort_index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1114.5 170.5 1114.5 189.5 1271.5 189.5 1271.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1193 177.5 0 141 27 -strain1_samtools_sort_index ",
		height=0.27778,
		label=strain1_samtools_sort_index,
		pos="1193,180",
		rects="1114.5,170.5,1271.5,189.5",
		width=2.1806];
	threads -> strain1_samtools_sort_index	[_draw_="c 7 -#000000 B 19 1126.74 313.54 1116.46 310.31 1104.27 306.94 1093 305 1077.43 302.32 962.23 308.12 951 297 933.92 280.09 932.62 \
261.47 948 243 991.95 190.21 1031.96 224.41 1100 215 1119.01 212.37 1171.32 219.37 1186 207 1188.86 204.59 1190.61 201.16 1191.67 \
197.57 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1194.06 198.14 1192.83 190.82 1189.23 197.31 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 964 245.6 0 32 7 -threads ",
		label=threads,
		lp="964,247.5",
		pos="e,1193.1,189.33 1126.7,313.54 1116.5,310.31 1104.3,306.94 1093,305 1077.4,302.32 962.23,308.12 951,297 933.92,280.09 932.62,261.47 \
948,243 991.95,190.21 1032,224.41 1100,215 1119,212.37 1171.3,219.37 1186,207 1188.9,204.59 1190.6,201.16 1191.7,197.57"];
	strain2_samtools_sort_index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 816.5 170.5 816.5 189.5 973.5 189.5 973.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 895 177.5 0 141 27 -strain2_samtools_sort_index ",
		height=0.27778,
		label=strain2_samtools_sort_index,
		pos="895,180",
		rects="816.5,170.5,973.5,189.5",
		width=2.1806];
	threads -> strain2_samtools_sort_index	[_draw_="c 7 -#000000 B 16 1126.74 313.52 1116.46 310.29 1104.27 306.92 1093 305 1076.44 302.17 956.84 304.88 942 297 920.99 285.84 889.77 \
230.08 884 207 883.03 203.12 882.87 201.84 884 198 884.14 197.52 884.3 197.03 884.48 196.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 886.57 197.85 887.66 190.51 882.23 195.56 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 920 245.6 0 32 7 -threads ",
		label=threads,
		lp="920,247.5",
		pos="e,888.37,189.17 1126.7,313.52 1116.5,310.29 1104.3,306.92 1093,305 1076.4,302.17 956.84,304.88 942,297 920.99,285.84 889.77,230.08 \
884,207 883.03,203.12 882.87,201.84 884,198 884.14,197.52 884.3,197.03 884.48,196.55"];
	strain2_project	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 697.5 125.5 697.5 144.5 786.5 144.5 786.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 742 132.5 0 73 15 -strain2_project ",
		height=0.27778,
		label=strain2_project,
		pos="742,135",
		rects="697.5,125.5,786.5,144.5",
		width=1.2361];
	strain2_chain_file -> strain2_project	[_draw_="c 7 -#000000 B 13 405.65 313.57 401.78 306.29 398.03 295.76 403 288 459.21 200.26 521.62 234.18 616 190 634.72 181.23 639.08 178.33 \
658 170 675.94 162.1 696.32 153.84 712.51 147.44 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 713.07 149.85 718.69 145.01 711.28 145.29 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 553 223.1 0 40 10 -chain_file ",
		label=chain_file,
		lp="553,225",
		pos="e,720.09,144.45 405.65,313.57 401.78,306.29 398.03,295.76 403,288 459.21,200.26 521.62,234.18 616,190 634.72,181.23 639.08,178.33 \
658,170 675.94,162.1 696.32,153.84 712.51,147.44"];
	strain1_project	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1148.5 125.5 1148.5 144.5 1237.5 144.5 1237.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1193 132.5 0 73 15 -strain1_project ",
		height=0.27778,
		label=strain1_project,
		pos="1193,135",
		rects="1148.5,125.5,1237.5,144.5",
		width=1.2361];
	strain1_chain_file -> strain1_project	[_draw_="c 7 -#000000 B 13 1367.45 313.56 1366.1 295.42 1362.07 253.52 1353 243 1345.93 234.81 1336.67 243.52 1330 235 1307.21 205.88 1345.78 \
174.91 1316 153 1304.82 144.78 1273.76 140.52 1245.65 138.33 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1246.1 135.91 1238.94 137.85 1245.75 140.79 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1350 223.1 0 40 10 -chain_file ",
		label=chain_file,
		lp="1350,225",
		pos="e,1237.4,137.74 1367.4,313.56 1366.1,295.42 1362.1,253.52 1353,243 1345.9,234.81 1336.7,243.52 1330,235 1307.2,205.88 1345.8,174.91 \
1316,153 1304.8,144.78 1273.8,140.52 1245.6,138.33"];
	reference_star_indices_folder -> reference_star_aligner	[_draw_="c 7 -#000000 B 7 1550.94 313.55 1567.32 306.62 1591.13 296.6 1612 288 1616.27 286.24 1620.8 284.39 1625.23 282.59 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1626.07 284.89 1631.64 279.99 1624.23 280.35 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1635 290.6 0 46 9 -genomeDir ",
		label=genomeDir,
		lp="1635,292.5",
		pos="e,1633,279.42 1550.9,313.55 1567.3,306.62 1591.1,296.6 1612,288 1616.3,286.24 1620.8,284.39 1625.2,282.59"];
	fastq_files -> reference_star_aligner	[_draw_="c 7 -#000000 B 13 1285.54 313.52 1295.69 310.25 1307.79 306.85 1319 305 1366.17 297.22 1489.28 313.91 1534 297 1539.91 294.77 1539.23 \
290.58 1545 288 1556.87 282.69 1570.12 279.01 1583.17 276.45 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1583.31 278.92 1589.77 275.27 1582.45 274.09 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1567.5 290.6 0 45 11 -readFilesIn ",
		label=readFilesIn,
		lp="1567.5,292.5",
		pos="e,1591.3,275.01 1285.5,313.52 1295.7,310.25 1307.8,306.85 1319,305 1366.2,297.22 1489.3,313.91 1534,297 1539.9,294.77 1539.2,290.58 \
1545,288 1556.9,282.69 1570.1,279.01 1583.2,276.45"];
	fastq_files -> insilico_star_aligner	[_draw_="c 7 -#000000 B 16 1238.74 313.59 1228.53 310.28 1216.31 306.84 1205 305 1097.47 287.51 1067.52 314.58 960 297 946.26 294.75 943.73 \
290.3 930 288 843.14 273.45 819.97 284.21 732 280 699.78 278.46 664 276.51 634.19 274.82 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 634.58 272.39 627.45 274.44 634.3 277.28 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 982.5 290.6 0 45 11 -readFilesIn ",
		label=readFilesIn,
		lp="982.5,292.5",
		pos="e,625.94,274.35 1238.7,313.59 1228.5,310.28 1216.3,306.84 1205,305 1097.5,287.51 1067.5,314.58 960,297 946.26,294.75 943.73,290.3 \
930,288 843.14,273.45 819.97,284.21 732,280 699.78,278.46 664,276.51 634.19,274.82"];
	fastq_files -> reference_samtools_sort	[_draw_="c 7 -#000000 B 16 1289.17 313.57 1298.58 310.74 1309.23 307.63 1319 305 1364.91 292.65 1382.87 305.49 1423 280 1432.61 273.9 1429.99 \
266.95 1439 260 1445.93 254.65 1452.23 259.34 1457 252 1458.79 249.25 1459.33 245.98 1459.18 242.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1461.59 242.26 1457.87 235.85 1456.78 243.19 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1482.5 268.1 0 87 20 -sort_output_filename ",
		label=sort_output_filename,
		lp="1482.5,270",
		pos="e,1457.6,234.37 1289.2,313.57 1298.6,310.74 1309.2,307.63 1319,305 1364.9,292.65 1382.9,305.49 1423,280 1432.6,273.9 1430,266.95 \
1439,260 1445.9,254.65 1452.2,259.34 1457,252 1458.8,249.25 1459.3,245.98 1459.2,242.7"];
	fastq_files -> strain1_samtools_sort_index	[_draw_="c 7 -#000000 B 7 1262.95 313.85 1265.64 289.17 1272.24 215.84 1258 198 1256.96 196.7 1255.84 195.49 1254.64 194.37 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1256.39 192.62 1249.32 190.36 1253.44 196.53 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1309.5 245.6 0 87 20 -sort_output_filename ",
		label=sort_output_filename,
		lp="1309.5,247.5",
		pos="e,1248.1,189.45 1262.9,313.85 1265.6,289.17 1272.2,215.84 1258,198 1257,196.7 1255.8,195.49 1254.6,194.37"];
	strain2_bam_to_bigwig	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 677 80.5 677 99.5 807 99.5 807 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 742 87.5 0 114 21 -strain2_bam_to_bigwig ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label=strain2_bam_to_bigwig,
		pos="742,90",
		rects="677,80.5,807,99.5",
		width=1.8056];
	fastq_files -> strain2_bam_to_bigwig	[_draw_="c 7 -#000000 B 25 1236.98 313.56 1227.11 310.49 1215.61 307.23 1205 305 1176.95 299.11 1168.83 303.86 1141 297 1129.94 294.27 1127.78 \
291.68 1117 288 1105.56 284.1 1100.18 287.86 1091 280 1077.11 268.1 1086.41 255.43 1073 243 1041.1 213.44 1010.14 240.17 982 207 \
971.12 194.17 985.19 182.56 974 170 933.77 124.84 866.69 105.48 814.98 97.18 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 815.6 94.8 808.31 96.17 814.86 99.64 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1030.5 200.6 0 97 19 -mapped_reads_number ",
		label=mapped_reads_number,
		lp="1030.5,202.5",
		pos="e,806.81,95.944 1237,313.56 1227.1,310.49 1215.6,307.23 1205,305 1176.9,299.11 1168.8,303.86 1141,297 1129.9,294.27 1127.8,291.68 \
1117,288 1105.6,284.1 1100.2,287.86 1091,280 1077.1,268.1 1086.4,255.43 1073,243 1041.1,213.44 1010.1,240.17 982,207 971.12,194.17 \
985.19,182.56 974,170 933.77,124.84 866.69,105.48 814.98,97.182"];
	reference_bam_to_bigwig	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 1382.5 170.5 1382.5 189.5 1525.5 189.5 1525.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1454 177.5 0 127 23 -reference_bam_to_bigwig ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label=reference_bam_to_bigwig,
		pos="1454,180",
		rects="1382.5,170.5,1525.5,189.5",
		width=1.9861];
	fastq_files -> reference_bam_to_bigwig	[_draw_="c 7 -#000000 B 13 1285.84 313.57 1295.94 310.35 1307.92 306.97 1319 305 1363.97 297 1494.45 315.65 1523 280 1532.03 268.73 1530.52 \
227.33 1523 215 1516.9 205 1506.88 197.86 1496.35 192.8 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1497.42 190.59 1490.02 190.06 1495.47 195.09 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1577.5 245.6 0 97 19 -mapped_reads_number ",
		label=mapped_reads_number,
		lp="1577.5,247.5",
		pos="e,1488.6,189.46 1285.8,313.57 1295.9,310.35 1307.9,306.97 1319,305 1364,297 1494.4,315.65 1523,280 1532,268.73 1530.5,227.33 1523,\
215 1516.9,205 1506.9,197.86 1496.3,192.8"];
	strain1_bam_to_bigwig	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 997 80.5 997 99.5 1127 99.5 1127 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1062 87.5 0 114 21 -strain1_bam_to_bigwig ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label=strain1_bam_to_bigwig,
		pos="1062,90",
		rects="997,80.5,1127,99.5",
		width=1.8056];
	fastq_files -> strain1_bam_to_bigwig	[_draw_="c 7 -#000000 B 13 1234.52 313.56 1225.18 310.75 1214.66 307.66 1205 305 1175.38 296.83 1167.98 294.72 1138 288 1119.88 283.94 1110.06 \
293.19 1097 280 1093.94 276.91 1072.62 153.33 1064.84 107.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1067.28 107.43 1063.69 100.94 1062.45 108.25 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1130.5 200.6 0 97 19 -mapped_reads_number ",
		label=mapped_reads_number,
		lp="1130.5,202.5",
		pos="e,1063.4,99.447 1234.5,313.56 1225.2,310.75 1214.7,307.66 1205,305 1175.4,296.83 1168,294.72 1138,288 1119.9,283.94 1110.1,293.19 \
1097,280 1093.9,276.91 1072.6,153.33 1064.8,107.7"];
	fastq_files -> strain2_samtools_sort_index	[_draw_="c 7 -#000000 B 16 1237.28 313.55 1227.35 310.44 1215.73 307.15 1205 305 1172.13 298.4 1162.82 303.84 1130 297 1108.88 292.6 993.74 \
256.13 989 252 968.92 234.5 983.65 214.82 963 198 960.69 196.12 958.21 194.45 955.6 192.96 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 957.16 190.99 949.8 190.09 954.99 195.38 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1032.5 245.6 0 87 20 -sort_output_filename ",
		label=sort_output_filename,
		lp="1032.5,247.5",
		pos="e,948.44,189.41 1237.3,313.55 1227.3,310.44 1215.7,307.15 1205,305 1172.1,298.4 1162.8,303.84 1130,297 1108.9,292.6 993.74,256.13 \
989,252 968.92,234.5 983.65,214.82 963,198 960.69,196.12 958.21,194.45 955.6,192.96"];
	strain2 -> insilico_star_aligner	[_draw_="c 7 -#000000 B 13 698.64 313.59 690.74 310.56 681.55 307.32 673 305 653.4 299.68 646.63 305.09 628 297 621.89 294.34 621.87 291.17 \
616 288 612.28 285.99 608.27 284.13 604.22 282.43 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 605.26 280.21 597.85 279.93 603.47 284.77 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 665 290.6 0 74 17 -outFileNamePrefix ",
		label=outFileNamePrefix,
		lp="665,292.5",
		pos="e,596.44,279.38 698.64,313.59 690.74,310.56 681.55,307.32 673,305 653.4,299.68 646.63,305.09 628,297 621.89,294.34 621.87,291.17 \
616,288 612.28,285.99 608.27,284.13 604.22,282.43"];
	strain2_sam_filter	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 722 215.5 722 234.5 826 234.5 826 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 774 222.5 0 88 18 -strain2_sam_filter ",
		height=0.27778,
		label=strain2_sam_filter,
		pos="774,225",
		rects="722,215.5,826,234.5",
		width=1.4444];
	strain2 -> strain2_sam_filter	[_draw_="c 7 -#000000 B 10 719.44 313.92 720.58 300.74 724.77 274.66 740 260 749.02 251.32 758.26 260.96 767 252 769.5 249.44 771.13 246.08 \
772.19 242.64 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 774.59 243.12 773.52 235.78 769.78 242.18 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 753.5 268.1 0 27 5 -param ",
		label=param,
		lp="753.5,270",
		pos="e,773.81,234.29 719.44,313.92 720.58,300.74 724.77,274.66 740,260 749.02,251.32 758.26,260.96 767,252 769.5,249.44 771.13,246.08 \
772.19,242.64"];
	strain2 -> strain2_samtools_sort_index	[_draw_="c 7 -#000000 B 10 715.62 313.59 712.29 306.13 706.6 295.31 699 288 673.15 263.13 610.83 271.96 632 243 644.05 226.52 761.27 203.79 \
835.1 190.93 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 835.46 193.35 841.94 189.74 834.62 188.52 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 675.5 245.6 0 87 20 -sort_output_filename ",
		label=sort_output_filename,
		lp="675.5,247.5",
		pos="e,843.43,189.49 715.62,313.59 712.29,306.13 706.6,295.31 699,288 673.15,263.13 610.83,271.96 632,243 644.05,226.52 761.27,203.79 \
835.1,190.93"];
	strain1 -> insilico_star_aligner	[_draw_="c 7 -#000000 B 10 785.54 313.67 778.17 310.78 769.76 307.61 762 305 736.14 296.3 729.73 293.51 703 288 680.7 283.4 656.04 279.85 \
634.02 277.2 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 634.46 274.79 627.22 276.41 633.89 279.65 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 774 290.6 0 74 17 -outFileNamePrefix ",
		label=outFileNamePrefix,
		lp="774,292.5",
		pos="e,625.72,276.23 785.54,313.67 778.17,310.78 769.76,307.61 762,305 736.14,296.3 729.73,293.51 703,288 680.7,283.4 656.04,279.85 634.02,\
277.2"];
	strain1_sam_filter	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1102 215.5 1102 234.5 1206 234.5 1206 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1154 222.5 0 88 18 -strain1_sam_filter ",
		height=0.27778,
		label=strain1_sam_filter,
		pos="1154,225",
		rects="1102,215.5,1206,234.5",
		width=1.4444];
	strain1 -> strain1_sam_filter	[_draw_="c 7 -#000000 B 10 819.24 313.57 833.05 305.29 855.62 293.18 877 288 892.02 284.36 1144.23 291.08 1155 280 1164.46 270.26 1162.9 \
254.25 1159.75 242.19 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1162.16 241.67 1157.77 235.7 1157.47 243.11 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1175.5 268.1 0 27 5 -param ",
		label=param,
		lp="1175.5,270",
		pos="e,1157.3,234.25 819.24,313.57 833.05,305.29 855.62,293.18 877,288 892.02,284.36 1144.2,291.08 1155,280 1164.5,270.26 1162.9,254.25 \
1159.8,242.19"];
	strain1 -> strain1_samtools_sort_index	[_draw_="c 7 -#000000 B 28 827.61 313.53 839.56 308.78 854.66 302.69 868 297 876.97 293.18 878.5 290.17 888 288 904.36 284.26 1178.29 292.02 \
1190 280 1196.2 273.63 1194.19 267.84 1190 260 1186.98 254.35 1181.02 257.65 1178 252 1176.11 248.47 1175.56 246.17 1178 243 1186.41 \
232.06 1195.77 241.4 1208 235 1227.52 224.78 1253.72 215.99 1241 198 1240.04 196.65 1238.97 195.4 1237.8 194.25 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1239.53 192.49 1232.47 190.21 1236.57 196.39 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1221.5 245.6 0 87 20 -sort_output_filename ",
		label=sort_output_filename,
		lp="1221.5,247.5",
		pos="e,1231.3,189.3 827.61,313.53 839.56,308.78 854.66,302.69 868,297 876.97,293.18 878.5,290.17 888,288 904.36,284.26 1178.3,292.02 \
1190,280 1196.2,273.63 1194.2,267.84 1190,260 1187,254.35 1181,257.65 1178,252 1176.1,248.47 1175.6,246.17 1178,243 1186.4,232.06 \
1195.8,241.4 1208,235 1227.5,224.78 1253.7,215.99 1241,198 1240,196.65 1239,195.4 1237.8,194.25"];
	insilico_star_indices_folder -> insilico_star_aligner	[_draw_="c 7 -#000000 B 4 569 313.58 569 306.52 569 296.24 569 287.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 571.45 287.78 569 280.78 566.55 287.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 592 290.6 0 46 9 -genomeDir ",
		label=genomeDir,
		lp="592,292.5",
		pos="e,569,279.26 569,313.58 569,306.52 569,296.24 569,287.55"];
	reference_chrom_length_file -> strain2_bam_to_bigwig	[_draw_="c 7 -#000000 B 16 892.31 313.5 870.96 309.71 851.67 304.38 844 297 817.12 271.13 853.96 239.71 826 215 810.95 201.71 755.85 210.03 \
736 207 700.93 201.64 680.26 217.63 658 190 632.37 158.18 685.16 121.78 718.16 103.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 718.98 105.59 723.94 100.08 716.62 101.29 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 772.5 200.6 0 73 17 -chrom_length_file ",
		label=chrom_length_file,
		lp="772.5,202.5",
		pos="e,725.27,99.354 892.31,313.5 870.96,309.71 851.67,304.38 844,297 817.12,271.13 853.96,239.71 826,215 810.95,201.71 755.85,210.03 \
736,207 700.93,201.64 680.26,217.63 658,190 632.37,158.18 685.16,121.78 718.16,103.24"];
	reference_chrom_length_file -> reference_bam_to_bigwig	[_draw_="c 7 -#000000 B 13 1028.64 313.53 1127.92 298.4 1325.57 266.92 1354 252 1363.46 247.03 1364.13 243.19 1371 235 1377.97 226.69 1376.76 \
222.06 1385 215 1395.91 205.64 1409.85 198.14 1422.34 192.59 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1423 194.97 1428.49 189.98 1421.09 190.46 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1400.5 245.6 0 73 17 -chrom_length_file ",
		label=chrom_length_file,
		lp="1400.5,247.5",
		pos="e,1429.9,189.39 1028.6,313.53 1127.9,298.4 1325.6,266.92 1354,252 1363.5,247.03 1364.1,243.19 1371,235 1378,226.69 1376.8,222.06 \
1385,215 1395.9,205.64 1409.8,198.14 1422.3,192.59"];
	reference_chrom_length_file -> strain1_bam_to_bigwig	[_draw_="c 7 -#000000 B 16 893.04 313.54 873.86 309.8 857.1 304.48 851 297 835.84 278.39 840.92 264.78 851 243 863.98 214.96 875.63 210.24 \
904 198 933.56 185.25 947.49 204.96 976 190 1012.61 170.8 1040.55 129.02 1053.71 106.36 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1055.69 107.83 1056.99 100.53 1051.42 105.43 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 940.5 200.6 0 73 17 -chrom_length_file ",
		label=chrom_length_file,
		lp="940.5,202.5",
		pos="e,1057.7,99.212 893.04,313.54 873.86,309.8 857.1,304.48 851,297 835.84,278.39 840.92,264.78 851,243 863.98,214.96 875.63,210.24 \
904,198 933.56,185.25 947.49,204.96 976,190 1012.6,170.8 1040.6,129.02 1053.7,106.36"];
	reference_star_aligner -> reference_star_stdout_log	[_draw_="c 7 -#000000 B 10 1705.89 260.58 1723.59 254.5 1739 244.03 1739 226 1739 226 1739 226 1739 89 1739 78.66 1685.36 65.25 1642.45 56.17 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1643.14 53.81 1635.78 54.78 1642.14 58.61 ",
		pos="e,1634.3,54.475 1705.9,260.58 1723.6,254.5 1739,244.03 1739,226 1739,226 1739,226 1739,89 1739,78.661 1685.4,65.249 1642.4,56.173"];
	reference_star_aligner -> reference_star_final_log	[_draw_="c 7 -#000000 B 10 1707.8 260.56 1742.05 253.6 1780 242.24 1780 226 1780 226 1780 226 1780 89 1780 80.04 1782.27 70.35 1784.74 62.44 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1787.06 63.25 1787.03 55.83 1782.43 61.65 ",
		pos="e,1787.5,54.404 1707.8,260.56 1742,253.6 1780,242.24 1780,226 1780,226 1780,226 1780,89 1780,80.042 1782.3,70.353 1784.7,62.444"];
	reference_star_aligner -> reference_star_out_log	[_draw_="c 7 -#000000 B 10 1716.89 269.73 1787.1 268.8 1891 261.44 1891 226 1891 226 1891 226 1891 89 1891 73.72 1901.4 63.84 1915.28 57.47 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1915.83 59.89 1921.42 55.01 1914.01 55.34 ",
		pos="e,1922.8,54.45 1716.9,269.73 1787.1,268.8 1891,261.44 1891,226 1891,226 1891,226 1891,89 1891,73.718 1901.4,63.845 1915.3,57.473"];
	reference_star_aligner -> reference_star_progress_log	[_draw_="c 7 -#000000 B 10 1716.59 268.48 1827.97 266.7 2049 259.02 2049 226 2049 226 2049 226 2049 89 2049 73.29 2081.63 62.72 2115.39 56 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2115.6 58.45 2122.02 54.74 2114.69 53.64 ",
		pos="e,2123.5,54.457 1716.6,268.48 1828,266.7 2049,259.02 2049,226 2049,226 2049,226 2049,89 2049,73.288 2081.6,62.724 2115.4,56"];
	reference_star_aligner -> reference_samtools_sort	[_draw_="c 7 -#000000 B 7 1591.4 264.58 1547.1 261.14 1493.87 256.26 1484 252 1477.73 249.3 1471.83 244.8 1466.94 240.3 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1468.72 238.61 1462.04 235.39 1465.25 242.07 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1504.5 245.6 0 41 10 -sort_input ",
		label=sort_input,
		lp="1504.5,247.5",
		pos="e,1461,234.32 1591.4,264.58 1547.1,261.14 1493.9,256.26 1484,252 1477.7,249.3 1471.8,244.8 1466.9,240.3"];
	reference_star_aligner -> reference_bam_to_bigwig	[_draw_="c 7 -#000000 B 10 1646.89 260.52 1641.98 255.04 1635.09 248.02 1628 243 1590.19 216.24 1577.85 212.92 1534 198 1526.54 195.46 1518.55 \
193.23 1510.62 191.28 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1511.58 188.99 1504.2 189.77 1510.46 193.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1664.5 223.1 0 97 19 -mapped_reads_number ",
		label=mapped_reads_number,
		lp="1664.5,225",
		pos="e,1502.7,189.43 1646.9,260.52 1642,255.04 1635.1,248.02 1628,243 1590.2,216.24 1577.8,212.92 1534,198 1526.5,195.46 1518.6,193.23 \
1510.6,191.28"];
	insilico_star_aligner -> insilico_star_out_log	[_draw_="c 7 -#000000 B 10 512.17 267.17 455.56 263.75 377 253.97 377 226 377 226 377 226 377 89 377 73.66 366.14 63.79 352.01 57.44 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 353.18 55.26 345.77 54.98 351.39 59.82 ",
		pos="e,344.37,54.426 512.17,267.17 455.56,263.75 377,253.97 377,226 377,226 377,226 377,89 377,73.656 366.14,63.785 352.01,57.436"];
	insilico_star_aligner -> insilico_star_stdout_log	[_draw_="c 7 -#000000 B 13 512.17 262.61 498.78 260.07 486.95 256.62 482 252 473.25 243.84 475 237.97 475 226 475 226 475 226 475 89 475 \
80.31 475 70.63 475 62.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 477.45 62.76 475 55.76 472.55 62.76 ",
		pos="e,475,54.243 512.17,262.61 498.78,260.07 486.95,256.62 482,252 473.25,243.84 475,237.97 475,226 475,226 475,226 475,89 475,80.308 \
475,70.627 475,62.655"];
	insilico_star_aligner -> insilico_star_progress_log	[_draw_="c 7 -#000000 B 10 519.28 260.58 501.6 254.49 486 244.01 486 226 486 226 486 226 486 89 486 82.08 563.96 66.32 619.74 55.92 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 619.87 58.38 626.31 54.7 618.98 53.57 ",
		pos="e,627.79,54.424 519.28,260.58 501.6,254.49 486,244.01 486,226 486,226 486,226 486,89 486,82.084 563.96,66.315 619.74,55.917"];
	insilico_star_aligner -> insilico_star_final_log	[_draw_="c 7 -#000000 B 10 512.3 268.24 407.26 266.06 193 257.74 193 226 193 226 193 226 193 89 193 73.65 181.98 63.78 167.78 57.43 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 168.93 55.25 161.52 54.97 167.14 59.81 ",
		pos="e,160.11,54.422 512.3,268.24 407.26,266.06 193,257.74 193,226 193,226 193,226 193,89 193,73.648 181.98,63.777 167.78,57.43"];
	insilico_star_aligner -> strain1_sam_filter	[_draw_="c 7 -#000000 B 10 625.93 265.74 685.96 262.16 776.53 256.36 811 252 832.97 249.22 838.02 245.64 860 243 940.6 233.31 1034.32 229.1 \
1093.88 227.3 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1093.61 229.76 1100.53 227.1 1093.47 224.86 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 879 245.6 0 38 10 -input_file ",
		label=input_file,
		lp="879,247.5",
		pos="e,1102,227.06 625.93,265.74 685.96,262.16 776.53,256.36 811,252 832.97,249.22 838.02,245.64 860,243 940.6,233.31 1034.3,229.1 1093.9,\
227.3"];
	insilico_star_aligner -> strain2_bam_to_bigwig	[_draw_="c 7 -#000000 B 7 564.21 260.74 552.5 240.03 524 186.44 533 170 559.16 122.24 619.47 103.1 668.62 95.56 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 668.94 97.99 675.53 94.58 668.25 93.14 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 581.5 178.1 0 97 19 -mapped_reads_number ",
		label=mapped_reads_number,
		lp="581.5,180",
		pos="e,677.03,94.365 564.21,260.74 552.5,240.03 524,186.44 533,170 559.16,122.24 619.47,103.1 668.62,95.561"];
	insilico_star_aligner -> strain2_sam_filter	[_draw_="c 7 -#000000 B 10 625.66 265.72 661.14 263.07 703.2 258.67 720 252 726.2 249.54 726.19 246.28 732 243 735.25 241.17 738.73 239.43 \
742.26 237.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 743.11 240.12 748.56 235.09 741.16 235.62 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 751 245.6 0 38 10 -input_file ",
		label=input_file,
		lp="751,247.5",
		pos="e,749.95,234.49 625.66,265.72 661.14,263.07 703.2,258.67 720,252 726.2,249.54 726.19,246.28 732,243 735.25,241.17 738.73,239.43 \
742.26,237.81"];
	insilico_star_aligner -> strain1_bam_to_bigwig	[_draw_="c 7 -#000000 B 16 625.85 269.06 659.37 267.81 697.42 263.71 709 252 734.78 225.93 691.4 195.23 718 170 729.47 159.13 844.61 165.59 \
860 162 919.73 148.07 928.64 126.85 987 108 994.53 105.57 1002.59 103.35 1010.53 101.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1010.7 103.86 1016.94 99.85 1009.56 99.09 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 766.5 178.1 0 97 19 -mapped_reads_number ",
		label=mapped_reads_number,
		lp="766.5,180",
		pos="e,1018.4,99.492 625.85,269.06 659.37,267.81 697.42,263.71 709,252 734.78,225.93 691.4,195.23 718,170 729.47,159.13 844.61,165.59 \
860,162 919.73,148.07 928.64,126.85 987,108 994.53,105.57 1002.6,103.35 1010.5,101.38"];
	strain1_sam_filter -> strain1_samtools_sort_index	[_draw_="c 7 -#000000 B 7 1187.51 215.65 1191.24 213.41 1194.56 210.58 1197 207 1198.91 204.19 1199.37 200.82 1199.07 197.45 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1201.5 197.09 1197.47 190.87 1196.74 198.25 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1219.5 200.6 0 41 10 -sort_input ",
		label=sort_input,
		lp="1219.5,202.5",
		pos="e,1197.1,189.4 1187.5,215.65 1191.2,213.41 1194.6,210.58 1197,207 1198.9,204.19 1199.4,200.82 1199.1,197.45"];
	strain1_project -> strain1_bambai_pair	[_draw_="c 7 -#000000 B 4 1191.18 125.56 1188.05 111.07 1181.6 81.21 1177.56 62.47 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1179.98 62.09 1176.11 55.76 1175.19 63.12 ",
		pos="e,1175.8,54.284 1191.2,125.56 1188,111.07 1181.6,81.205 1177.6,62.471"];
	strain1_project -> strain1_bam_to_bigwig	[_draw_="c 7 -#000000 B 7 1167.08 125.54 1158.75 122.81 1149.48 119.78 1141 117 1126.09 112.11 1109.6 106.69 1095.56 102.06 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1096.47 99.78 1089.05 99.92 1094.93 104.43 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1158.5 110.6 0 35 8 -bam_file ",
		label=bam_file,
		lp="1158.5,112.5",
		pos="e,1087.6,99.444 1167.1,125.54 1158.7,122.81 1149.5,119.78 1141,117 1126.1,112.11 1109.6,106.69 1095.6,102.06"];
	reference_samtools_sort -> reference_bambai_pair	[_draw_="c 7 -#000000 B 10 1385.64 215.87 1368.06 209.72 1354 199.14 1354 181 1354 181 1354 181 1354 89 1354 74.85 1342.73 64.82 1330.12 \
58.03 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1331.35 55.9 1323.99 55.06 1329.22 60.31 ",
		pos="e,1322.6,54.397 1385.6,215.87 1368.1,209.72 1354,199.14 1354,181 1354,181 1354,181 1354,89 1354,74.854 1342.7,64.824 1330.1,58.03"];
	reference_samtools_sort -> reference_bam_to_bigwig	[_draw_="c 7 -#000000 B 4 1454 215.71 1454 210.59 1454 203.85 1454 197.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1456.45 197.78 1454 190.78 1451.55 197.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1471.5 200.6 0 35 8 -bam_file ",
		label=bam_file,
		lp="1471.5,202.5",
		pos="e,1454,189.27 1454,215.71 1454,210.59 1454,203.85 1454,197.67"];
	strain1_samtools_sort_index -> strain1_project	[_draw_="c 7 -#000000 B 4 1193 170.71 1193 165.59 1193 158.85 1193 152.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1195.45 152.78 1193 145.78 1190.55 152.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1212 155.6 0 38 10 -input_file ",
		label=input_file,
		lp="1212,157.5",
		pos="e,1193,144.27 1193,170.71 1193,165.59 1193,158.85 1193,152.67"];
	strain2_bam_to_bigwig -> strain2_bigwig	[_draw_="c 7 -#000000 B 4 760.18 80.5 773.91 74.09 792.95 65.19 808.25 58.04 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 809.19 60.3 814.49 55.12 807.11 55.86 ",
		pos="e,815.86,54.478 760.18,80.505 773.91,74.085 792.95,65.188 808.25,58.036"];
	reference_bam_to_bigwig -> reference_bigwig	[_draw_="c 7 -#000000 B 4 1452.12 170.68 1447.26 149.13 1434.19 91.17 1427.72 62.51 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1430.14 62.08 1426.21 55.79 1425.36 63.16 ",
		pos="e,1425.9,54.317 1452.1,170.68 1447.3,149.13 1434.2,91.169 1427.7,62.509"];
	strain2_sam_filter -> strain2_samtools_sort_index	[_draw_="c 7 -#000000 B 7 790.97 215.54 802.38 210.06 817.86 203.04 832 198 838.37 195.73 845.19 193.6 851.9 191.66 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 852.17 194.13 858.25 189.88 850.85 189.41 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 852.5 200.6 0 41 10 -sort_input ",
		label=sort_input,
		lp="852.5,202.5",
		pos="e,859.71,189.47 790.97,215.54 802.38,210.06 817.86,203.04 832,198 838.37,195.73 845.19,193.6 851.9,191.66"];
	strain2_project -> strain2_bambai_pair	[_draw_="c 7 -#000000 B 4 761.85 125.56 799.02 109.76 879.18 75.68 921.52 57.68 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 922.34 60 927.82 55 920.42 55.49 ",
		pos="e,929.21,54.412 761.85,125.56 799.02,109.76 879.18,75.68 921.52,57.683"];
	strain2_project -> strain2_bam_to_bigwig	[_draw_="c 7 -#000000 B 4 742 125.71 742 120.59 742 113.85 742 107.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 744.45 107.78 742 100.78 739.55 107.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 759.5 110.6 0 35 8 -bam_file ",
		label=bam_file,
		lp="759.5,112.5",
		pos="e,742,99.265 742,125.71 742,120.59 742,113.85 742,107.67"];
	strain1_bam_to_bigwig -> strain1_bigwig	[_draw_="c 7 -#000000 B 4 1062 80.71 1062 75.59 1062 68.85 1062 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1064.45 62.78 1062 55.78 1059.55 62.78 ",
		pos="e,1062,54.265 1062,80.709 1062,75.593 1062,68.848 1062,62.666"];
	strain2_samtools_sort_index -> strain2_project	[_draw_="c 7 -#000000 B 7 855.27 170.58 844.13 168.03 832.05 165.08 821 162 805.16 157.58 787.77 151.95 773.35 147.06 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 774.53 144.87 767.11 144.92 772.94 149.5 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 840 155.6 0 38 10 -input_file ",
		label=input_file,
		lp="840,157.5",
		pos="e,765.68,144.43 855.27,170.58 844.13,168.03 832.05,165.08 821,162 805.16,157.58 787.77,151.95 773.35,147.06"];
	default1	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 1657.5 313.5 1657.5 332.5 1680.5 332.5 1680.5 313.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1669 320.5 0 7 1 -1 ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label=1,
		pos="1669,323",
		rects="1657.5,313.5,1680.5,332.5",
		width=0.31944];
	default1 -> reference_star_aligner	[_draw_="c 7 -#000000 B 4 1666.52 313.58 1664.43 306.45 1661.36 296.02 1658.79 287.27 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1661.18 286.74 1656.86 280.72 1656.48 288.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1708 290.6 0 94 21 -outFilterMultimapNmax ",
		label=outFilterMultimapNmax,
		lp="1708,292.5",
		pos="e,1656.4,279.26 1666.5,313.58 1664.4,306.45 1661.4,296.02 1658.8,287.27"];
	default2	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 268 313.5 268 332.5 316 332.5 316 313.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 292 320.5 0 32 5 -\"SAM\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"SAM\"",
		pos="292,323",
		rects="268,313.5,316,332.5",
		width=0.66667];
	default2 -> insilico_star_aligner	[_draw_="c 7 -#000000 B 7 303.78 313.57 308.61 310.46 314.38 307.17 320 305 379.48 282.05 452.18 274.22 503.63 271.73 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 503.62 274.18 510.51 271.43 503.41 269.29 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 396.5 290.6 0 49 10 -outSAMtype ",
		label=outSAMtype,
		lp="396.5,292.5",
		pos="e,512.02,271.36 303.78,313.57 308.61,310.46 314.38,307.17 320,305 379.48,282.05 452.18,274.22 503.63,271.73"];
	default3	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 320.5 313.5 320.5 332.5 343.5 332.5 343.5 313.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 332 320.5 0 7 1 -1 ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label=1,
		pos="332,323",
		rects="320.5,313.5,343.5,332.5",
		width=0.31944];
	default3 -> insilico_star_aligner	[_draw_="c 7 -#000000 B 13 338.94 313.76 342.23 310.44 346.44 306.94 351 305 394.88 286.33 412.35 310.8 458 297 465.81 294.64 466.32 290.76 \
474 288 483.52 284.58 493.83 281.83 504.03 279.62 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 504.32 282.06 510.69 278.27 503.34 277.26 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 521 290.6 0 94 21 -outFilterMultimapNmax ",
		label=outFilterMultimapNmax,
		lp="521,292.5",
		pos="e,512.17,277.96 338.94,313.76 342.23,310.44 346.44,306.94 351,305 394.88,286.33 412.35,310.8 458,297 465.81,294.64 466.32,290.76 \
474,288 483.52,284.58 493.83,281.83 504.03,279.62"];
	default4	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 1097.5 260.5 1097.5 279.5 1154.5 279.5 1154.5 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1126 267.5 0 41 8 -default4 ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"cat \"$0\" | grep \"$1\" | sed \"s/$1/chr/g\"  > `basename $0`\"",
		pos="1126,270",
		rects="1097.5,260.5,1154.5,279.5",
		width=0.79167];
	default4 -> strain1_sam_filter	[_draw_="c 7 -#000000 B 7 1125.66 260.7 1125.81 255.29 1126.73 248.28 1130 243 1130.57 242.07 1131.22 241.18 1131.92 240.32 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1133.59 242.12 1137.01 235.54 1130.24 238.55 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1141.5 245.6 0 23 6 -script ",
		label=script,
		lp="1141.5,247.5",
		pos="e,1138.1,234.5 1125.7,260.7 1125.8,255.29 1126.7,248.28 1130,243 1130.6,242.07 1131.2,241.18 1131.9,240.32"];
	default5	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 1275.5 170.5 1275.5 189.5 1322.5 189.5 1322.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1299 177.5 0 31 5 -\"bam\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"bam\"",
		pos="1299,180",
		rects="1275.5,170.5,1322.5,189.5",
		width=0.65278];
	default5 -> strain1_project	[_draw_="c 7 -#000000 B 4 1278.06 170.5 1261.94 163.97 1239.49 154.86 1221.7 147.64 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1222.71 145.41 1215.3 145.05 1220.87 149.95 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1285 155.6 0 60 15 -input_file_type ",
		label=input_file_type,
		lp="1285,157.5",
		pos="e,1213.9,144.48 1278.1,170.5 1261.9,163.97 1239.5,154.86 1221.7,147.64"];
	default6	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 768.5 260.5 768.5 279.5 825.5 279.5 825.5 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 797 267.5 0 41 8 -default6 ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"cat \"$0\" | grep \"$1\" | sed \"s/$1/chr/g\"  > `basename $0`\"",
		pos="797,270",
		rects="768.5,260.5,825.5,279.5",
		width=0.79167];
	default6 -> strain2_sam_filter	[_draw_="c 7 -#000000 B 4 792.57 260.71 789.64 255.24 785.71 247.9 782.23 241.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 784.6 240.62 779.13 235.6 780.28 242.93 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 798.5 245.6 0 23 6 -script ",
		label=script,
		lp="798.5,247.5",
		pos="e,778.42,234.27 792.57,260.71 789.64,255.24 785.71,247.9 782.23,241.38"];
	default7	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 659.5 170.5 659.5 189.5 706.5 189.5 706.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 683 177.5 0 31 5 -\"bam\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"bam\"",
		pos="683,180",
		rects="659.5,170.5,706.5,189.5",
		width=0.65278];
	default7 -> strain2_project	[_draw_="c 7 -#000000 B 4 694.66 170.5 702.9 164.5 714.12 156.32 723.57 149.43 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 724.93 151.47 729.14 145.37 722.04 147.51 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 747 155.6 0 60 15 -input_file_type ",
		label=input_file_type,
		lp="747,157.5",
		pos="e,730.37,144.48 694.66,170.5 702.9,164.5 714.12,156.32 723.57,149.43"];
}