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		label=input_bam,
		lp="1610.3,247.5",
		pos="e,1631,140.41 1582.9,358.76 1585.3,348.73 1588.8,331.24 1588.8,316 1588.8,316 1588.8,316 1588.8,179 1588.8,160.92 1607.1,149.64 \
1623.3,143.19"];
	nthreads -> "sort-bam-by-name"	[_draw_="c 7 -#000000 B 10 1675.51 358.58 1681.52 355.31 1688.78 351.91 1695.79 350 1721.15 343.1 1792.9 357.96 1813.79 342 1816.9 339.62 \
1818.94 336.09 1820.28 332.4 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1822.59 333.28 1821.87 325.9 1817.83 332.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1838.29 335.6 0 37 8 -nthreads ",
		label=nthreads,
		lp="1838.3,337.5",
		pos="e,1822.2,324.43 1675.5,358.58 1681.5,355.31 1688.8,351.91 1695.8,350 1721.1,343.1 1792.9,357.96 1813.8,342 1816.9,339.62 1818.9,\
336.09 1820.3,332.4"];
	nthreads -> spp	[_draw_="c 7 -#000000 B 10 1657.96 358.53 1653.81 348.57 1647.79 331.43 1647.79 316 1647.79 316 1647.79 316 1647.79 179 1647.79 170.31 1647.79 \
160.63 1647.79 152.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1650.24 152.76 1647.79 145.76 1645.34 152.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1666.29 245.6 0 37 8 -nthreads ",
		label=nthreads,
		lp="1666.3,247.5",
		pos="e,1647.8,144.24 1658,358.53 1653.8,348.57 1647.8,331.43 1647.8,316 1647.8,316 1647.8,316 1647.8,179 1647.8,170.31 1647.8,160.63 \
1647.8,152.65"];
	"peak-calling-unpaired"	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2045.29 170.5 2045.29 189.5 2168.29 189.5 2168.29 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2106.79 177.5 0 107 21 -peak-calling-unpaired ",
		height=0.27778,
		label="peak-calling-unpaired",
		pos="2106.8,180",
		rects="2045.3,170.5,2168.3,189.5",
		width=1.7083];
	genome_effective_size -> "peak-calling-unpaired"	[_draw_="c 7 -#000000 B 13 1496.59 358.5 1508.24 355.57 1521.56 352.41 1533.79 350 1584.04 340.08 1761.79 367.23 1761.79 316 1761.79 316 \
1761.79 316 1761.79 224 1761.79 196.52 1936.41 186.37 2037.19 182.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2037.08 185.26 2043.99 182.58 2036.91 180.37 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1764.79 268.1 0 6 1 -g ",
		label=g,
		lp="1764.8,270",
		pos="e,2045.5,182.52 1496.6,358.5 1508.2,355.57 1521.6,352.41 1533.8,350 1584,340.08 1761.8,367.23 1761.8,316 1761.8,316 1761.8,316 1761.8,\
224 1761.8,196.52 1936.4,186.37 2037.2,182.81"];
	genome_effective_size -> "peak-calling"	[_draw_="c 7 -#000000 B 10 1434.5 358.54 1422.79 355.5 1409.24 352.27 1396.79 350 1366.41 344.47 1357.42 350.64 1327.79 342 1241.71 316.91 \
1148.54 263.03 1108.69 238.56 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1110.41 236.74 1103.17 235.14 1107.83 240.91 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1216.79 290.6 0 6 1 -g ",
		label=g,
		lp="1216.8,292.5",
		pos="e,1101.9,234.34 1434.5,358.54 1422.8,355.5 1409.2,352.27 1396.8,350 1366.4,344.47 1357.4,350.64 1327.8,342 1241.7,316.91 1148.5,\
263.03 1108.7,238.56"];
	"clip-off-chrom"	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3114.29 72.5 3114.29 91.5 3199.29 91.5 3199.29 72.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3156.79 79.5 0 69 14 -clip-off-chrom ",
		height=0.27778,
		label="clip-off-chrom",
		pos="3156.8,82",
		rects="3114.3,72.5,3199.3,91.5",
		width=1.1806];
	input_genome_sizes -> "clip-off-chrom"	[_draw_="c 7 -#000000 B 13 1811.68 366.05 2050.39 361.97 2945.79 344.72 2945.79 316 2945.79 316 2945.79 316 2945.79 134 2945.79 96.56 3074.79 \
110.3 3110.79 100 3116.53 98.36 3122.57 96.34 3128.33 94.28 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3128.8 96.71 3134.52 91.99 3127.1 92.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2975.29 223.1 0 59 12 -genome_sizes ",
		label=genome_sizes,
		lp="2975.3,225",
		pos="e,3135.9,91.461 1811.7,366.05 2050.4,361.97 2945.8,344.72 2945.8,316 2945.8,316 2945.8,316 2945.8,134 2945.8,96.563 3074.8,110.3 \
3110.8,100 3116.5,98.358 3122.6,96.34 3128.3,94.275"];
	input_genome_sizes -> "peaks-bed-to-bigbed-unpaired"	[_draw_="c 7 -#000000 B 16 1811.64 366.51 2081.88 364.02 3206.79 351.53 3206.79 316 3206.79 316 3206.79 316 3206.79 81 3206.79 64.7 3211.57 \
56.26 3199.79 45 3162.43 9.3 3136.27 32.36 3084.79 28 2956.34 17.12 2582.99 12.97 2409.88 11.59 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2410.07 9.14 2403.05 11.54 2410.03 14.04 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3236.29 200.6 0 59 12 -genome_sizes ",
		label=genome_sizes,
		lp="3236.3,202.5",
		pos="e,2401.5,11.528 1811.6,366.51 2081.9,364.02 3206.8,351.53 3206.8,316 3206.8,316 3206.8,316 3206.8,81 3206.8,64.7 3211.6,56.262 3199.8,\
45 3162.4,9.3027 3136.3,32.36 3084.8,28 2956.3,17.121 2583,12.967 2409.9,11.593"];
	input_genome_sizes -> "peaks-bed-to-bigbed"	[_draw_="c 7 -#000000 B 13 1728.13 358.52 1717.08 355.25 1703.92 351.85 1691.79 350 1664.8 345.89 709.79 343.29 709.79 316 709.79 316 709.79 \
316 709.79 179 709.79 167.47 717.4 157.23 725.42 149.63 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 726.67 151.78 730.37 145.35 723.47 148.08 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 739.29 245.6 0 59 12 -genome_sizes ",
		label=genome_sizes,
		lp="739.29,247.5",
		pos="e,731.51,144.36 1728.1,358.52 1717.1,355.25 1703.9,351.85 1691.8,350 1664.8,345.89 709.79,343.29 709.79,316 709.79,316 709.79,316 \
709.79,179 709.79,167.47 717.4,157.23 725.42,149.63"];
	"trunk-peak-score-unpaired"	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2787.79 125.5 2787.79 144.5 2933.79 144.5 2933.79 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2860.79 132.5 0 130 25 -trunk-peak-score-unpaired ",
		height=0.27778,
		label="trunk-peak-score-unpaired",
		pos="2860.8,135",
		rects="2787.8,125.5,2933.8,144.5",
		width=2.0278];
	"trunk-peak-score-unpaired" -> "clip-off-chrom"	[_draw_="c 7 -#000000 B 10 2872.37 125.75 2881.71 119.61 2895.44 111.66 2908.79 108 2952.11 96.1 3066.73 108.78 3110.79 100 3117.24 98.71 \
3124 96.65 3130.28 94.4 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3130.84 96.81 3136.51 92.03 3129.1 92.23 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2925.29 110.6 0 33 8 -bed_file ",
		label=bed_file,
		lp="2925.3,112.5",
		pos="e,3137.9,91.494 2872.4,125.75 2881.7,119.61 2895.4,111.66 2908.8,108 2952.1,96.104 3066.7,108.78 3110.8,100 3117.2,98.712 3124,96.651 \
3130.3,94.401"];
	bedtools_bamtobed	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1810.29 260.5 1810.29 279.5 1923.29 279.5 1923.29 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1866.79 267.5 0 97 17 -bedtools_bamtobed ",
		height=0.27778,
		label=bedtools_bamtobed,
		pos="1866.8,270",
		rects="1810.3,260.5,1923.3,279.5",
		width=1.5694];
	"sort-bam-by-name" -> bedtools_bamtobed	[_draw_="c 7 -#000000 B 4 1831.27 305.71 1837.23 299.88 1845.36 291.93 1852.34 285.12 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1853.95 286.97 1857.25 280.32 1850.53 283.46 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1857.29 290.6 0 19 3 -bam ",
		label=bam,
		lp="1857.3,292.5",
		pos="e,1858.3,279.27 1831.3,305.71 1837.2,299.88 1845.4,291.93 1852.3,285.12"];
	"clip-off-chrom" -> "peaks-bed-to-bigbed-unpaired"	[_draw_="c 7 -#000000 B 7 3149.28 72.62 3140.88 63.91 3126.39 50.76 3110.79 45 3046.58 21.31 2603.51 13.9 2409.95 11.78 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2410.02 9.33 2402.99 11.71 2409.97 14.23 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3075.79 30.6 0 16 3 -bed ",
		label=bed,
		lp="3075.8,32.5",
		pos="e,2401.5,11.689 3149.3,72.624 3140.9,63.913 3126.4,50.758 3110.8,45 3046.6,21.307 2603.5,13.901 2409.9,11.78"];
	"peak-calling-unpaired" -> output_unpaired_peak_xls_file	[_draw_="c 7 -#000000 B 4 2085.21 170.65 2040.69 153.41 1938.59 113.89 1888.13 94.36 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1889.31 92.19 1881.9 91.95 1887.54 96.76 ",
		pos="e,1880.5,91.4 2085.2,170.65 2040.7,153.41 1938.6,113.89 1888.1,94.358"];
	"peak-calling-unpaired" -> output_unpaired_peak_file	[_draw_="c 7 -#000000 B 4 2099.28 170.82 2084.36 154.53 2050.76 117.89 2032.04 97.46 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2034.08 96.06 2027.54 92.55 2030.47 99.37 ",
		pos="e,2026.5,91.438 2099.3,170.82 2084.4,154.53 2050.8,117.89 2032,97.455"];
	"peak-calling-unpaired" -> output_unpaired_peak_summits_file	[_draw_="c 7 -#000000 B 4 2132.09 170.56 2184.27 153.17 2303.76 113.34 2361.86 93.97 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2362.34 96.4 2368.2 91.86 2360.79 91.75 ",
		pos="e,2369.6,91.382 2132.1,170.56 2184.3,153.17 2303.8,113.34 2361.9,93.974"];
	"peak-calling-unpaired" -> output_unpaired_extended_peak_file	[_draw_="c 7 -#000000 B 4 2114.29 170.82 2129.22 154.53 2162.81 117.89 2181.54 97.46 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2183.1 99.37 2186.03 92.55 2179.49 96.06 ",
		pos="e,2187.1,91.438 2114.3,170.82 2129.2,154.53 2162.8,117.89 2181.5,97.455"];
	"peak-calling-unpaired" -> "trunk-peak-score-unpaired"	[_draw_="c 7 -#000000 B 10 2168.16 177.72 2257.64 175.64 2429.11 170.83 2574.79 162 2663.83 156.6 2685.97 153.42 2774.79 145 2776.41 144.85 \
2778.05 144.69 2779.71 144.53 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2779.84 146.98 2786.56 143.86 2779.36 142.1 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2703.29 155.6 0 25 5 -peaks ",
		label=peaks,
		lp="2703.3,157.5",
		pos="e,2788.1,143.71 2168.2,177.72 2257.6,175.64 2429.1,170.83 2574.8,162 2663.8,156.6 2686,153.42 2774.8,145 2776.4,144.85 2778.1,144.69 \
2779.7,144.53"];
	"peak-calling-unpaired" -> "filter-reads-in-peaks-unpaired"	[_draw_="c 7 -#000000 B 7 2045.41 176.58 2007.52 174.35 1958.04 170.08 1914.79 162 1895.41 158.38 1874.22 152.36 1857.26 147.03 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1858.16 144.74 1850.75 144.94 1856.67 149.41 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1941.79 155.6 0 54 13 -input_bedfile ",
		label=input_bedfile,
		lp="1941.8,157.5",
		pos="e,1849.3,144.48 2045.4,176.58 2007.5,174.35 1958,170.08 1914.8,162 1895.4,158.38 1874.2,152.36 1857.3,147.03"];
	"count-reads-filtered-unpaired"	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2465.29 125.5 2465.29 144.5 2624.29 144.5 2624.29 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2544.79 132.5 0 143 29 -count-reads-filtered-unpaired ",
		height=0.27778,
		label="count-reads-filtered-unpaired",
		pos="2544.8,135",
		rects="2465.3,125.5,2624.3,144.5",
		width=2.2083];
	"peak-calling-unpaired" -> "count-reads-filtered-unpaired"	[_draw_="c 7 -#000000 B 4 2168.15 172.98 2243.34 165.59 2371.27 153.03 2456.89 144.63 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2457.07 147.07 2463.79 143.95 2456.59 142.2 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2390.79 155.6 0 52 13 -peak_xls_file ",
		label=peak_xls_file,
		lp="2390.8,157.5",
		pos="e,2465.3,143.8 2168.1,172.98 2243.3,165.59 2371.3,153.03 2456.9,144.63"];
	"count-peaks-unpaired"	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2649.29 125.5 2649.29 144.5 2772.29 144.5 2772.29 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2710.79 132.5 0 107 20 -count-peaks-unpaired ",
		height=0.27778,
		label="count-peaks-unpaired",
		pos="2710.8,135",
		rects="2649.3,125.5,2772.3,144.5",
		width=1.7083];
	"peak-calling-unpaired" -> "count-peaks-unpaired"	[_draw_="c 7 -#000000 B 10 2168.18 176.13 2230.94 173.07 2331.2 167.89 2417.79 162 2510.77 155.68 2534 153.74 2626.79 145 2631.46 144.56 \
2636.28 144.09 2641.14 143.6 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2641.11 146.07 2647.82 142.92 2640.61 141.19 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2554.79 155.6 0 38 10 -input_file ",
		label=input_file,
		lp="2554.8,157.5",
		pos="e,2649.3,142.77 2168.2,176.13 2230.9,173.07 2331.2,167.89 2417.8,162 2510.8,155.68 2534,153.74 2626.8,145 2631.5,144.56 2636.3,144.09 \
2641.1,143.6"];
	"peak-calling" -> output_peak_xls_file	[_draw_="c 7 -#000000 B 7 1127.05 220.81 1179.49 215.94 1270.54 205.54 1299.79 190 1345.13 165.91 1387.28 121.19 1407.4 97.92 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1409.27 99.51 1411.94 92.59 1405.54 96.34 ",
		pos="e,1412.9,91.441 1127,220.81 1179.5,215.94 1270.5,205.54 1299.8,190 1345.1,165.91 1387.3,121.19 1407.4,97.925"];
	"peak-calling" -> output_extended_peak_file	[_draw_="c 7 -#000000 B 16 1050.47 217.41 1035.51 214.57 1018.26 211 1002.79 207 978.83 200.81 972.89 198.85 949.79 190 883.84 164.73 873.45 \
141.52 804.79 125 592.34 73.88 530.41 128.63 313.79 100 301.58 98.39 288.46 95.88 276.49 93.29 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 277.25 90.95 269.88 91.81 276.18 95.73 ",
		pos="e,268.41,91.485 1050.5,217.41 1035.5,214.57 1018.3,211 1002.8,207 978.83,200.81 972.89,198.85 949.79,190 883.84,164.73 873.45,141.52 \
804.79,125 592.34,73.879 530.41,128.63 313.79,100 301.58,98.387 288.46,95.882 276.49,93.287"];
	"peak-calling" -> output_peak_summits_file	[_draw_="c 7 -#000000 B 16 1050.9 215.51 1041.9 213.1 1032.41 210.24 1023.79 207 993.21 195.5 912.14 147.74 909.79 145 898.32 131.67 910.16 \
118.13 895.79 108 885.97 101.09 475.7 101.41 463.79 100 451.52 98.55 438.35 96.01 426.42 93.33 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 427.23 91 419.86 91.81 426.12 95.78 ",
		pos="e,418.39,91.463 1050.9,215.51 1041.9,213.1 1032.4,210.24 1023.8,207 993.21,195.5 912.14,147.74 909.79,145 898.32,131.67 910.16,118.13 \
895.79,108 885.97,101.09 475.7,101.41 463.79,100 451.52,98.548 438.35,96.009 426.42,93.329"];
	"peak-calling" -> output_peak_file	[_draw_="c 7 -#000000 B 10 1093.96 215.71 1097.8 209.05 1102.71 199.3 1104.79 190 1111.09 161.81 1114.62 152.16 1104.79 125 1100.95 114.4 \
1093.14 104.6 1085.87 97.13 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1087.81 95.6 1081.08 92.5 1084.41 99.13 ",
		pos="e,1080,91.446 1094,215.71 1097.8,209.05 1102.7,199.3 1104.8,190 1111.1,161.81 1114.6,152.16 1104.8,125 1100.9,114.4 1093.1,104.6 \
1085.9,97.134"];
	"count-reads-filtered"	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 910.29 125.5 910.29 144.5 1023.29 144.5 1023.29 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 966.79 132.5 0 97 20 -count-reads-filtered ",
		height=0.27778,
		label="count-reads-filtered",
		pos="966.79,135",
		rects="910.29,125.5,1023.3,144.5",
		width=1.5694];
	"peak-calling" -> "count-reads-filtered"	[_draw_="c 7 -#000000 B 7 1062.61 215.59 1047.19 209.86 1027.82 201.27 1012.79 190 998.26 179.12 985.21 162.86 976.75 151.03 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 978.97 149.93 972.97 145.57 974.94 152.72 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1038.79 178.1 0 52 13 -peak_xls_file ",
		label=peak_xls_file,
		lp="1038.8,180",
		pos="e,972.11,144.32 1062.6,215.59 1047.2,209.86 1027.8,201.27 1012.8,190 998.26,179.12 985.21,162.86 976.75,151.03"];
	"peak-calling" -> "filter-reads-in-peaks"	[_draw_="c 7 -#000000 B 4 1118.62 215.5 1142.51 208.7 1176.16 199.12 1201.94 191.78 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1202.5 194.17 1208.56 189.89 1201.16 189.45 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1204.79 200.6 0 54 13 -input_bedfile ",
		label=input_bedfile,
		lp="1204.8,202.5",
		pos="e,1210,189.48 1118.6,215.5 1142.5,208.7 1176.2,199.12 1201.9,191.78"];
	"count-peaks"	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1027.29 125.5 1027.29 144.5 1104.29 144.5 1104.29 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1065.79 132.5 0 61 11 -count-peaks ",
		height=0.27778,
		label="count-peaks",
		pos="1065.8,135",
		rects="1027.3,125.5,1104.3,144.5",
		width=1.0694];
	"peak-calling" -> "count-peaks"	[_draw_="c 7 -#000000 B 7 1082.67 215.53 1078.25 208.92 1072.59 199.33 1069.79 190 1066.15 177.88 1065.23 163.58 1065.18 152.74 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1067.62 152.8 1065.28 145.76 1062.73 152.72 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1088.79 178.1 0 38 10 -input_file ",
		label=input_file,
		lp="1088.8,180",
		pos="e,1065.3,144.25 1082.7,215.53 1078.2,208.92 1072.6,199.33 1069.8,190 1066.1,177.88 1065.2,163.58 1065.2,152.74"];
	"trunk-peak-score"	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 784.79 170.5 784.79 189.5 884.79 189.5 884.79 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 834.79 177.5 0 84 16 -trunk-peak-score ",
		height=0.27778,
		label="trunk-peak-score",
		pos="834.79,180",
		rects="784.79,170.5,884.79,189.5",
		width=1.3889];
	"peak-calling" -> "trunk-peak-score"	[_draw_="c 7 -#000000 B 7 1050.36 224.15 994.88 223.85 895.42 221.25 862.79 207 856.77 204.37 851.22 199.89 846.67 195.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 848.72 193.98 842.17 190.49 845.11 197.3 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 875.29 200.6 0 25 5 -peaks ",
		label=peaks,
		lp="875.29,202.5",
		pos="e,841.15,189.38 1050.4,224.15 994.88,223.85 895.42,221.25 862.79,207 856.77,204.37 851.22,199.89 846.67,195.38"];
	"peaks-bed-to-bigbed-unpaired" -> output_unpaired_peak_bigbed_file	[_draw_="c 7 -#000000 B 7 2237.8 11.57 1971.26 13.63 1139.53 21.86 1020.79 45 995.71 49.89 968.59 60.61 949.58 69.08 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 948.7 66.8 943.35 71.93 950.73 71.25 ",
		pos="e,941.97,72.557 2237.8,11.566 1971.3,13.627 1139.5,21.859 1020.8,45 995.71,49.886 968.59,60.606 949.58,69.084"];
	"count-reads-filtered" -> output_filtered_read_count_file	[_draw_="c 7 -#000000 B 10 952.03 125.72 940.2 119.55 922.96 111.6 906.79 108 847.98 94.9 695.67 106.62 635.79 100 621.56 98.43 606.21 95.79 \
592.36 93.06 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 593.24 90.74 585.89 91.75 592.26 95.54 ",
		pos="e,584.41,91.445 952.03,125.72 940.2,119.55 922.96,111.6 906.79,108 847.98,94.898 695.67,106.62 635.79,100 621.56,98.427 606.21,95.79 \
592.36,93.058"];
	"count-reads-filtered-unpaired" -> output_unpaired_filtered_read_count_file	[_draw_="c 7 -#000000 B 4 2554.53 125.58 2563.64 117.71 2577.39 105.82 2588.05 96.6 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2589.39 98.69 2593.08 92.25 2586.18 94.98 ",
		pos="e,2594.2,91.265 2554.5,125.58 2563.6,117.71 2577.4,105.82 2588.1,96.598"];
	"extract-count-reads-in-peaks"	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1160.79 125.5 1160.79 144.5 1318.79 144.5 1318.79 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1239.79 132.5 0 142 28 -extract-count-reads-in-peaks ",
		height=0.27778,
		label="extract-count-reads-in-peaks",
		pos="1239.8,135",
		rects="1160.8,125.5,1318.8,144.5",
		width=2.1944];
	"filter-reads-in-peaks" -> "extract-count-reads-in-peaks"	[_draw_="c 7 -#000000 B 4 1239.79 170.71 1239.79 165.59 1239.79 158.85 1239.79 152.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1242.24 152.78 1239.79 145.78 1237.34 152.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1269.79 155.6 0 60 14 -input_bam_file ",
		label=input_bam_file,
		lp="1269.8,157.5",
		pos="e,1239.8,144.27 1239.8,170.71 1239.8,165.59 1239.8,158.85 1239.8,152.67"];
	"count-peaks" -> output_peak_count_within_replicate	[_draw_="c 7 -#000000 B 13 1027.33 125.76 1026.14 125.5 1024.95 125.25 1023.79 125 988.24 117.41 979.78 113.1 943.79 108 894.81 101.07 881.9 \
105.89 832.79 100 817 98.11 799.92 95.46 784.38 92.82 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 785.21 90.48 777.89 91.7 784.37 95.31 ",
		pos="e,776.4,91.446 1027.3,125.76 1026.1,125.5 1025,125.25 1023.8,125 988.24,117.41 979.78,113.1 943.79,108 894.81,101.07 881.9,105.89 \
832.79,100 817,98.107 799.92,95.462 784.38,92.822"];
	"extract-peak-frag-length"	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2973.29 72.5 2973.29 91.5 3110.29 91.5 3110.29 72.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3041.79 79.5 0 121 24 -extract-peak-frag-length ",
		height=0.27778,
		label="extract-peak-frag-length",
		pos="3041.8,82",
		rects="2973.3,72.5,3110.3,91.5",
		width=1.9028];
	"count-peaks-unpaired" -> output_unpaired_peak_count_within_replicate	[_draw_="c 7 -#000000 B 7 2772.04 126.68 2799.58 123.13 2826.49 119.16 2828.79 117 2833.55 112.51 2835.53 105.71 2836.24 99.37 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2838.67 99.86 2836.48 92.78 2833.77 99.68 ",
		pos="e,2836.5,91.263 2772,126.68 2799.6,123.13 2826.5,119.16 2828.8,117 2833.6,112.51 2835.5,105.71 2836.2,99.368"];
	unpair_bedpe	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1919.29 215.5 1919.29 234.5 2002.29 234.5 2002.29 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1960.79 222.5 0 67 12 -unpair_bedpe ",
		height=0.27778,
		label=unpair_bedpe,
		pos="1960.8,225",
		rects="1919.3,215.5,2002.3,234.5",
		width=1.1528];
	unpair_bedpe -> "peak-calling-unpaired"	[_draw_="c 7 -#000000 B 4 1989.63 215.5 2012.63 208.73 2044.99 199.2 2069.87 191.87 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2070.53 194.23 2076.55 189.91 2069.14 189.53 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2067.29 200.6 0 41 9 -treatment ",
		label=treatment,
		lp="2067.3,202.5",
		pos="e,2078,189.48 1989.6,215.5 2012.6,208.73 2045,199.2 2069.9,191.87"];
	spp -> output_spp_x_cross_corr	[_draw_="c 7 -#000000 B 4 1631.77 125.58 1616.04 117.31 1591.88 104.61 1574.04 95.23 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1575.5 93.23 1568.17 92.14 1573.22 97.56 ",
		pos="e,1566.8,91.434 1631.8,125.58 1616,117.31 1591.9,104.61 1574,95.228"];
	spp -> output_spp_cross_corr_plot	[_draw_="c 7 -#000000 B 4 1656.04 125.58 1663.61 117.85 1674.98 106.26 1683.94 97.12 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1685.47 99.06 1688.62 92.35 1681.97 95.63 ",
		pos="e,1689.7,91.265 1656,125.58 1663.6,117.85 1675,106.26 1683.9,97.123"];
	spp -> "extract-peak-frag-length"	[_draw_="c 7 -#000000 B 10 1664.74 131.99 1683.54 129.85 1714.78 126.57 1741.79 125 1877.59 117.12 2830.74 116.32 2965.79 100 2977.77 98.55 \
2990.65 96.04 3002.33 93.39 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3002.87 95.78 3009.13 91.8 3001.75 91.01 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2834.29 110.6 0 71 18 -input_spp_txt_file ",
		label=input_spp_txt_file,
		lp="2834.3,112.5",
		pos="e,3010.6,91.451 1664.7,131.99 1683.5,129.85 1714.8,126.57 1741.8,125 1877.6,117.12 2830.7,116.32 2965.8,100 2977.8,98.551 2990.6,\
96.044 3002.3,93.393"];
	"extract-count-reads-in-peaks" -> output_read_in_peak_count_within_replicate	[_draw_="c 7 -#000000 B 4 1239.79 125.58 1239.79 118.52 1239.79 108.24 1239.79 99.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1242.24 99.78 1239.79 92.78 1237.34 99.78 ",
		pos="e,1239.8,91.265 1239.8,125.58 1239.8,118.52 1239.8,108.24 1239.8,99.547"];
	"trunk-peak-score" -> "peaks-bed-to-bigbed"	[_draw_="c 7 -#000000 B 7 818.15 170.65 807.74 165.48 794.03 158.74 781.79 153 778.13 151.29 774.27 149.51 770.45 147.79 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 771.56 145.6 764.17 144.96 769.55 150.07 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 806.79 155.6 0 16 3 -bed ",
		label=bed,
		lp="806.79,157.5",
		pos="e,762.79,144.34 818.15,170.65 807.74,165.48 794.03,158.74 781.79,153 778.13,151.29 774.27,149.51 770.45,147.79"];
	bedtools_bamtobed -> unpair_bedpe	[_draw_="c 7 -#000000 B 4 1885.36 260.5 1899.52 254.03 1919.2 245.02 1934.9 237.84 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1935.53 240.25 1940.88 235.11 1933.49 235.79 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1935.29 245.6 0 27 5 -bedpe ",
		label=bedpe,
		lp="1935.3,247.5",
		pos="e,1942.3,234.48 1885.4,260.5 1899.5,254.03 1919.2,245.02 1934.9,237.84"];
	"peaks-bed-to-bigbed" -> output_peak_bigbed_file	[_draw_="c 7 -#000000 B 7 685.01 133.94 579.33 133.09 350.47 127.85 159.79 100 148.85 98.4 137.13 95.96 126.39 93.42 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 127.24 91.1 119.86 91.82 126.08 95.86 ",
		pos="e,118.39,91.466 685.01,133.94 579.33,133.09 350.47,127.85 159.79,100 148.85,98.403 137.13,95.958 126.39,93.416"];
}
