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	sam2bam	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 725.5 530.5 725.5 549.5 790.5 549.5 790.5 530.5 ",
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	nthreads -> sam2bam	[_draw_="c 7 -#000000 B 10 827.97 628.55 822.26 625.44 815.48 622.15 809 620 788.47 613.19 775.32 628.2 761 612 754.15 604.25 754.99 576.19 \
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	nthreads -> "bowtie-se"	[_draw_="c 7 -#000000 B 13 855.71 628.53 861.72 625.26 868.98 621.86 876 620 907.84 611.57 994.33 626.3 1024 612 1028.82 609.68 1027.58 606.02 \
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	nthreads -> sort_dups_marked_bams	[_draw_="c 7 -#000000 B 10 857.02 628.7 879.16 616.21 918 593.27 918 586 918 586 918 586 918 314 918 305.13 916.14 295.45 914.12 287.53 ",
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	nthreads -> sort_bams	[_draw_="c 7 -#000000 B 13 828.3 628.67 822.53 625.5 815.62 622.14 809 620 786.33 612.67 776.87 623.49 756 612 732.82 599.24 726.25 591.8 \
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	nthreads -> filtered2sorted	[_draw_="c 7 -#000000 B 13 828.34 628.56 822.57 625.37 815.66 622.03 809 620 749.81 601.98 674 647.87 674 586 674 586 674 586 674 449 674 \
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	nthreads -> sort_dedup_bams	[_draw_="c 7 -#000000 B 13 856.9 628.61 862.73 625.58 869.55 622.34 876 620 937.82 597.59 1020 651.76 1020 586 1020 586 1020 586 1020 179 \
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		label=java_opts,
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		label=genome_sizes,
		lp="588.5,495",
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		label=genome_ref_first_index_file,
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		label=input_fastq_file,
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		lp="962,687.5",
		pos="e,830.46,705.55 1011.8,647.28 1001.9,655.64 985.47,668.27 969,675 927.55,691.93 877.89,700.43 838.66,704.7"];
	picard_jar_path -> mark_duplicates	[_draw_="c 7 -#000000 B 16 917.86 628.89 911.28 615.92 898.16 589.69 888 567 870.32 527.53 867.01 517.18 851 477 828.61 420.8 830.55 403.34 \
802 350 797.64 341.85 797.66 338.18 790 333 785.35 329.86 780.19 327.3 774.84 325.21 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 775.73 322.92 768.31 322.96 774.13 327.55 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 882.5 470.6 0 63 15 -picard_jar_path ",
		label=picard_jar_path,
		lp="882.5,472.5",
		pos="e,766.88,322.47 917.86,628.89 911.28,615.92 898.16,589.69 888,567 870.32,527.53 867.01,517.18 851,477 828.61,420.8 830.55,403.34 \
802,350 797.64,341.85 797.66,338.18 790,333 785.35,329.86 780.19,327.3 774.84,325.21"];
	sam2bam -> sort_bams	[_draw_="c 7 -#000000 B 4 752.6 530.71 749.04 525.24 744.26 517.9 740.02 511.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 742.08 510.06 736.21 505.53 737.97 512.74 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 765 515.6 0 38 10 -input_file ",
		label=input_file,
		lp="765,517.5",
		pos="e,735.38,504.27 752.6,530.71 749.04,525.24 744.26,517.9 740.02,511.38"];
	index_bams	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 783 170.5 783 189.5 859 189.5 859 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 821 177.5 0 60 10 -index_bams ",
		height=0.27778,
		label=index_bams,
		pos="821,180",
		rects="783,170.5,859,189.5",
		width=1.0556];
	bam_idxstats	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 759.5 125.5 759.5 144.5 842.5 144.5 842.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 801 132.5 0 67 12 -bam_idxstats ",
		height=0.27778,
		label=bam_idxstats,
		pos="801,135",
		rects="759.5,125.5,842.5,144.5",
		width=1.1528];
	index_bams -> bam_idxstats	[_draw_="c 7 -#000000 B 4 817.14 170.71 814.65 165.36 811.33 158.22 808.35 151.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 810.66 150.95 805.48 145.64 806.21 153.02 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 821.5 155.6 0 19 3 -bam ",
		label=bam,
		lp="821.5,157.5",
		pos="e,804.84,144.27 817.14,170.71 814.65,165.36 811.33,158.22 808.35,151.81"];
	"bowtie-se" -> output_bowtie_log	[_draw_="c 7 -#000000 B 13 1110.22 584.03 1207.73 583.7 1493 579.44 1493 541 1493 541 1493 541 1493 89 1493 56.48 1605.37 70.55 1637 63 1644.45 \
61.22 1652.37 59.05 1659.86 56.86 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1660.32 59.27 1666.32 54.92 1658.91 54.58 ",
		pos="e,1667.8,54.487 1110.2,584.03 1207.7,583.7 1493,579.44 1493,541 1493,541 1493,541 1493,89 1493,56.483 1605.4,70.547 1637,63 1644.5,\
61.222 1652.4,59.048 1659.9,56.855"];
	"bowtie-se" -> sam2bam	[_draw_="c 7 -#000000 B 4 1045.56 579.64 986.71 571.73 862.53 555.05 798.33 546.42 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 798.82 544.01 791.55 545.51 798.17 548.87 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 965 560.6 0 38 10 -input_file ",
		label=input_file,
		lp="965,562.5",
		pos="e,790.05,545.31 1045.6,579.64 986.71,571.73 862.53,555.05 798.33,546.42"];
	mapped_reads_count	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1345.5 80.5 1345.5 99.5 1466.5 99.5 1466.5 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1406 87.5 0 105 18 -mapped_reads_count ",
		height=0.27778,
		label=mapped_reads_count,
		pos="1406,90",
		rects="1345.5,80.5,1466.5,99.5",
		width=1.6806];
	"bowtie-se" -> mapped_reads_count	[_draw_="c 7 -#000000 B 10 1110.05 584.69 1174.13 585.2 1312 581.58 1312 541 1312 541 1312 541 1312 134 1312 118.18 1323.14 108.16 1337.75 \
101.82 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1338.57 104.13 1344.25 99.36 1336.84 99.54 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1334.5 335.6 0 45 10 -bowtie_log ",
		label=bowtie_log,
		lp="1334.5,337.5",
		pos="e,1345.7,98.824 1110,584.69 1174.1,585.2 1312,581.58 1312,541 1312,541 1312,541 1312,134 1312,118.18 1323.1,108.16 1337.8,101.82"];
	index_dups_marked_bams	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 836 215.5 836 234.5 982 234.5 982 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 909 222.5 0 130 22 -index_dups_marked_bams ",
		height=0.27778,
		label=index_dups_marked_bams,
		pos="909,225",
		rects="836,215.5,982,234.5",
		width=2.0278];
	sort_dups_marked_bams -> index_dups_marked_bams	[_draw_="c 7 -#000000 B 4 909 260.71 909 255.59 909 248.85 909 242.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 911.45 242.78 909 235.78 906.55 242.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 928 245.6 0 38 10 -input_file ",
		label=input_file,
		lp="928,247.5",
		pos="e,909,234.27 909,260.71 909,255.59 909,248.85 909,242.67"];
	extract_basename_2	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 462.5 628.5 462.5 647.5 581.5 647.5 581.5 628.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 522 635.5 0 103 18 -extract_basename_2 ",
		height=0.27778,
		label=extract_basename_2,
		pos="522,638",
		rects="462.5,628.5,581.5,647.5",
		width=1.6528];
	extract_basename_1 -> extract_basename_2	[_draw_="c 7 -#000000 B 7 711.6 702.61 675.44 697.57 628.71 689 589 675 572.34 669.13 554.8 659.57 541.85 651.77 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 543.33 649.8 536.08 648.22 540.76 653.98 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 665 685.6 0 36 9 -file_path ",
		label=file_path,
		lp="665,687.5",
		pos="e,534.79,647.43 711.6,702.61 675.44,697.57 628.71,689 589,675 572.34,669.13 554.8,659.57 541.85,651.77"];
	percent_mitochondrial_reads	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 721 80.5 721 99.5 879 99.5 879 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 800 87.5 0 142 27 -percent_mitochondrial_reads ",
		height=0.27778,
		label=percent_mitochondrial_reads,
		pos="800,90",
		rects="721,80.5,879,99.5",
		width=2.1944];
	bam_idxstats -> percent_mitochondrial_reads	[_draw_="c 7 -#000000 B 4 800.81 125.71 800.69 120.59 800.53 113.85 800.39 107.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 802.84 107.72 800.23 100.78 797.94 107.83 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 816.5 110.6 0 33 8 -idxstats ",
		label=idxstats,
		lp="816.5,112.5",
		pos="e,800.19,99.265 800.81,125.71 800.69,120.59 800.53,113.85 800.39,107.67"];
	extract_basename_2 -> "bowtie-se"	[_draw_="c 7 -#000000 B 7 550.46 628.58 562.28 625.4 576.2 622.05 589 620 753.75 593.59 952.97 587.69 1037.23 586.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1037.26 588.83 1044.22 586.27 1037.19 583.93 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 755.5 605.6 0 67 15 -output_filename ",
		label=output_filename,
		lp="755.5,607.5",
		pos="e,1045.7,586.25 550.46,628.58 562.28,625.4 576.2,622.05 589,620 753.75,593.59 952.97,587.69 1037.2,586.38"];
	"filter-unmapped"	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 504.5 440.5 504.5 459.5 599.5 459.5 599.5 440.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 552 447.5 0 79 15 -filter-unmapped ",
		height=0.27778,
		label="filter-unmapped",
		pos="552,450",
		rects="504.5,440.5,599.5,459.5",
		width=1.3194];
	extract_basename_2 -> "filter-unmapped"	[_draw_="c 7 -#000000 B 10 522 628.7 522 618.6 522 601.05 522 586 522 586 522 586 522 494 522 483.05 528.63 472.89 535.65 465.2 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 537.21 467.11 540.44 460.43 533.75 463.64 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 555.5 538.1 0 67 15 -output_filename ",
		label=output_filename,
		lp="555.5,540",
		pos="e,541.51,459.36 522,628.7 522,618.6 522,601.05 522,586 522,586 522,586 522,494 522,483.05 528.63,472.89 535.65,465.2"];
	extract_basename_2 -> execute_pcr_bottleneck_coef	[_draw_="c 7 -#000000 B 10 462.71 628.85 439.35 621.99 418 609.33 418 586 418 586 418 586 418 404 418 389.91 429.24 379.85 441.74 373.03 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 442.61 375.33 447.81 370.04 440.45 370.93 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 466.5 493.1 0 97 22 -input_output_filenames ",
		label=input_output_filenames,
		lp="466.5,495",
		pos="e,449.17,369.37 462.71,628.85 439.35,621.99 418,609.33 418,586 418,586 418,586 418,404 418,389.91 429.24,379.85 441.74,373.03"];
	extract_basename_2 -> mark_duplicates	[_draw_="c 7 -#000000 B 7 529.24 628.7 542.22 613.61 569.98 580.43 590 550 641.59 471.6 691.72 370.67 710.37 332.03 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 712.57 333.1 713.39 325.73 708.15 330.98 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 672.5 470.6 0 67 15 -output_filename ",
		label=output_filename,
		lp="672.5,472.5",
		pos="e,714.04,324.36 529.24,628.7 542.22,613.61 569.98,580.43 590,550 641.59,471.6 691.72,370.67 710.37,332.03"];
	"preseq-c-curve"	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 241.5 125.5 241.5 144.5 330.5 144.5 330.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 286 132.5 0 73 14 -preseq-c-curve ",
		height=0.27778,
		label="preseq-c-curve",
		pos="286,135",
		rects="241.5,125.5,330.5,144.5",
		width=1.2361];
	extract_basename_2 -> "preseq-c-curve"	[_draw_="c 7 -#000000 B 10 462.71 633.72 402.16 628.7 317 616.26 317 586 317 586 317 586 317 179 317 167.93 310.15 157.77 302.89 150.1 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 304.68 148.42 297.93 145.34 301.29 151.95 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 362.5 380.6 0 91 20 -output_file_basename ",
		label=output_file_basename,
		lp="362.5,382.5",
		pos="e,296.84,144.29 462.71,633.72 402.16,628.7 317,616.26 317,586 317,586 317,586 317,179 317,167.93 310.15,157.77 302.89,150.1"];
	index_filtered_bam	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 568 350.5 568 369.5 678 369.5 678 350.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 623 357.5 0 94 18 -index_filtered_bam ",
		height=0.27778,
		label=index_filtered_bam,
		pos="623,360",
		rects="568,350.5,678,369.5",
		width=1.5278];
	index_filtered_bam -> mark_duplicates	[_draw_="c 7 -#000000 B 7 627.31 350.72 630.78 344.88 636.19 337.36 643 333 648.66 329.38 654.99 326.53 661.51 324.28 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 661.81 326.75 667.78 322.35 660.37 322.07 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 662 335.6 0 38 10 -input_file ",
		label=input_file,
		lp="662,337.5",
		pos="e,669.22,321.91 627.31,350.72 630.78,344.88 636.19,337.36 643,333 648.66,329.38 654.99,326.53 661.51,324.28"];
	"filter-unmapped" -> filtered2sorted	[_draw_="c 7 -#000000 B 4 553.74 440.71 554.83 435.47 556.28 428.53 557.6 422.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 559.92 423.1 558.96 415.75 555.13 422.1 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 576 425.6 0 38 10 -input_file ",
		label=input_file,
		lp="576,427.5",
		pos="e,559.27,414.27 553.74,440.71 554.83,435.47 556.28,428.53 557.6,422.24"];
	mapped_reads_count -> output_read_count_mapped	[_draw_="c 7 -#000000 B 4 1436.43 80.5 1460.89 73.67 1495.41 64.03 1521.75 56.68 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1522.1 59.13 1528.18 54.88 1520.78 54.41 ",
		pos="e,1529.6,54.478 1436.4,80.505 1460.9,73.673 1495.4,64.035 1521.7,56.681"];
	sort_bams -> index_bams	[_draw_="c 7 -#000000 B 10 735.42 485.9 755.01 456.31 821 353.83 821 316 821 316 821 316 821 224 821 215.31 821 205.63 821 197.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 823.45 197.76 821 190.76 818.55 197.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 836 335.6 0 38 10 -input_file ",
		label=input_file,
		lp="836,337.5",
		pos="e,821,189.24 735.42,485.9 755.01,456.31 821,353.83 821,316 821,316 821,316 821,224 821,215.31 821,205.63 821,197.65"];
	sort_bams -> "filter-unmapped"	[_draw_="c 7 -#000000 B 7 696.05 491.75 646.84 488.34 561.02 481.75 556 477 553.46 474.6 552.08 471.31 551.4 467.87 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 553.85 467.81 550.96 460.98 548.96 468.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 575 470.6 0 38 10 -input_file ",
		label=input_file,
		lp="575,472.5",
		pos="e,550.86,459.47 696.05,491.75 646.84,488.34 561.02,481.75 556,477 553.46,474.6 552.08,471.31 551.4,467.87"];
	percent_mitochondrial_reads -> output_percent_mitochondrial_reads	[_draw_="c 7 -#000000 B 4 788.94 80.5 781.19 74.56 770.67 66.48 761.76 59.64 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 763.29 57.72 756.24 55.4 760.3 61.61 ",
		pos="e,755.04,54.478 788.94,80.505 781.19,74.556 770.67,66.481 761.76,59.637"];
	execute_pcr_bottleneck_coef -> output_pbc_files	[_draw_="c 7 -#000000 B 13 516.45 350.58 533.79 344.41 550 333.86 550 316 550 316 550 316 550 89 550 41.79 492.35 76.12 447 63 440.71 61.18 \
434.04 59.11 427.65 57.05 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 428.61 54.79 421.19 54.95 427.09 59.45 ",
		pos="e,419.76,54.477 516.45,350.58 533.79,344.41 550,333.86 550,316 550,316 550,316 550,89 550,41.786 492.35,76.121 447,63 440.71,61.181 \
434.04,59.11 427.65,57.054"];
	filtered2sorted -> index_filtered_bam	[_draw_="c 7 -#000000 B 4 573.25 395.5 582 389.44 593.93 381.16 603.92 374.23 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 605.18 376.34 609.53 370.34 602.38 372.32 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 616 380.6 0 38 10 -input_file ",
		label=input_file,
		lp="616,382.5",
		pos="e,610.78,369.48 573.25,395.5 582,389.44 593.93,381.16 603.92,374.23"];
	filtered2sorted -> execute_pcr_bottleneck_coef	[_draw_="c 7 -#000000 B 7 517.28 398 508.74 395.51 500.21 391.98 493 387 489.15 384.34 485.86 380.56 483.2 376.71 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 485.34 375.51 479.63 370.78 481.14 378.04 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 525 380.6 0 64 15 -input_bam_files ",
		label=input_bam_files,
		lp="525,382.5",
		pos="e,478.84,369.48 517.28,398 508.74,395.51 500.21,391.98 493,387 489.15,384.34 485.86,380.56 483.2,376.71"];
	filtered2sorted -> "preseq-c-curve"	[_draw_="c 7 -#000000 B 10 561 395.76 561 387.1 561 373.09 561 361 561 361 561 361 561 224 561 177.78 418.29 152.48 338.48 141.95 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 339.25 139.58 331.99 141.11 338.62 144.44 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 595 268.1 0 68 17 -input_sorted_file ",
		label=input_sorted_file,
		lp="595,270",
		pos="e,330.49,140.92 561,395.76 561,387.1 561,373.09 561,361 561,361 561,361 561,224 561,177.78 418.29,152.48 338.48,141.95"];
	mark_duplicates -> output_picard_mark_duplicates_files	[_draw_="c 7 -#000000 B 10 710.47 305.8 703.76 297.62 695 284.38 695 271 695 271 695 271 695 89 695 78.6 641 65.2 597.8 56.14 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 598.43 53.77 591.08 54.75 597.44 58.57 ",
		pos="e,589.6,54.448 710.47,305.8 703.76,297.62 695,284.38 695,271 695,271 695,271 695,89 695,78.597 641,65.198 597.8,56.143"];
	mark_duplicates -> sort_dups_marked_bams	[_draw_="c 7 -#000000 B 4 755.74 305.5 786.6 298.56 830.37 288.7 863.24 281.3 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 863.58 283.74 869.87 279.81 862.5 278.96 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 849 290.6 0 38 10 -input_file ",
		label=input_file,
		lp="849,292.5",
		pos="e,871.34,279.48 755.74,305.5 786.6,298.56 830.37,288.7 863.24,281.3"];
	"preseq-c-curve" -> output_preseq_c_curve_files	[_draw_="c 7 -#000000 B 4 283.99 125.56 280.53 111.07 273.4 81.21 268.93 62.47 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 271.34 62 267.33 55.76 266.57 63.13 ",
		pos="e,266.98,54.284 283.99,125.56 280.53,111.07 273.4,81.205 268.93,62.471"];
	percent_uniq_reads	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 91 80.5 91 99.5 203 99.5 203 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 147 87.5 0 96 18 -percent_uniq_reads ",
		height=0.27778,
		label=percent_uniq_reads,
		pos="147,90",
		rects="91,80.5,203,99.5",
		width=1.5556];
	"preseq-c-curve" -> percent_uniq_reads	[_draw_="c 7 -#000000 B 7 241.73 134.03 219.72 132.44 193.34 128.01 172 117 166.81 114.32 162.09 110.15 158.18 105.92 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 160.1 104.4 153.73 100.61 156.35 107.55 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 219 110.6 0 94 22 -preseq_c_curve_outfile ",
		label=preseq_c_curve_outfile,
		lp="219,112.5",
		pos="e,152.76,99.449 241.73,134.03 219.72,132.44 193.34,128.01 172,117 166.81,114.32 162.09,110.15 158.18,105.92"];
	mapped_filtered_reads_count	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 951.5 80.5 951.5 99.5 1112.5 99.5 1112.5 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1032 87.5 0 145 27 -mapped_filtered_reads_count ",
		height=0.27778,
		label=mapped_filtered_reads_count,
		pos="1032,90",
		rects="951.5,80.5,1112.5,99.5",
		width=2.2361];
	mapped_filtered_reads_count -> output_read_count_mapped_filtered	[_draw_="c 7 -#000000 B 4 1061.24 80.5 1084.65 73.7 1117.64 64.12 1142.91 56.78 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1143.33 59.21 1149.37 54.9 1141.96 54.5 ",
		pos="e,1150.8,54.478 1061.2,80.505 1084.7,73.702 1117.6,64.118 1142.9,56.776"];
	percent_uniq_reads -> output_percentage_uniq_reads	[_draw_="c 7 -#000000 B 4 137.94 80.71 131.44 74.76 122.53 66.61 114.98 59.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 116.97 58.2 110.15 55.29 113.66 61.82 ",
		pos="e,109.03,54.265 137.94,80.709 131.44,74.76 122.53,66.609 114.98,59.701"];
	sort_dedup_bams -> mapped_filtered_reads_count	[_draw_="c 7 -#000000 B 4 1030.39 125.71 1030.62 120.59 1030.94 113.85 1031.22 107.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1033.67 107.88 1031.55 100.78 1028.77 107.66 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1061 110.6 0 60 14 -input_bam_file ",
		label=input_bam_file,
		lp="1061,112.5",
		pos="e,1031.6,99.265 1030.4,125.71 1030.6,120.59 1030.9,113.85 1031.2,107.67"];
	index_dedup_bams	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1192.5 80.5 1192.5 99.5 1303.5 99.5 1303.5 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1248 87.5 0 95 16 -index_dedup_bams ",
		height=0.27778,
		label=index_dedup_bams,
		pos="1248,90",
		rects="1192.5,80.5,1303.5,99.5",
		width=1.5417];
	sort_dedup_bams -> index_dedup_bams	[_draw_="c 7 -#000000 B 4 1073.07 125.5 1108.6 118.5 1159.1 108.53 1196.72 101.12 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1197.14 103.53 1203.53 99.77 1196.19 98.72 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1177 110.6 0 38 10 -input_file ",
		label=input_file,
		lp="1177,112.5",
		pos="e,1205,99.478 1073.1,125.5 1108.6,118.5 1159.1,108.53 1196.7,101.12"];
	remove_duplicates	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 903 170.5 903 189.5 1013 189.5 1013 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 958 177.5 0 94 17 -remove_duplicates ",
		height=0.27778,
		label=remove_duplicates,
		pos="958,180",
		rects="903,170.5,1013,189.5",
		width=1.5278];
	remove_duplicates -> sort_dedup_bams	[_draw_="c 7 -#000000 B 7 962.59 170.66 966.12 164.95 971.49 157.6 978 153 980.71 151.08 983.66 149.37 986.72 147.84 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 987.69 150.09 993.11 145.03 985.72 145.6 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 997 155.6 0 38 10 -input_file ",
		label=input_file,
		lp="997,157.5",
		pos="e,994.5,144.42 962.59,170.66 966.12,164.95 971.49,157.6 978,153 980.71,151.08 983.66,149.37 986.72,147.84"];
	index_dedup_bams -> output_data_sorted_dedup_bam_files	[_draw_="c 7 -#000000 B 4 1274.08 80.5 1294.69 73.79 1323.62 64.37 1346.04 57.06 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1346.64 59.44 1352.54 54.95 1345.12 54.79 ",
		pos="e,1354,54.478 1274.1,80.505 1294.7,73.791 1323.6,64.366 1346,57.063"];
	index_dups_marked_bams -> output_data_sorted_dups_marked_bam_files	[_draw_="c 7 -#000000 B 10 904.89 215.66 901.08 207.16 896 193.48 896 181 896 181 896 181 896 89 896 74.19 907.74 64.24 921.39 57.69 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 922.25 59.98 927.72 54.98 920.32 55.48 ",
		pos="e,929.11,54.381 904.89,215.66 901.08,207.16 896,193.48 896,181 896,181 896,181 896,89 896,74.189 907.74,64.244 921.39,57.685"];
	index_dups_marked_bams -> remove_duplicates	[_draw_="c 7 -#000000 B 4 918.45 215.71 925.23 209.76 934.52 201.61 942.39 194.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 943.8 196.72 947.44 190.26 940.57 193.04 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 956 200.6 0 38 10 -input_file ",
		label=input_file,
		lp="956,202.5",
		pos="e,948.58,189.27 918.45,215.71 925.23,209.76 934.52,201.61 942.39,194.7"];
}