digraph workflow {
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		nthreads	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 451.5 223.5 451.5 242.5 510.5 242.5 510.5 223.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 481 230.5 0 43 8 -nthreads ",
			fillcolor="#94DDF4",
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			rects="451.5,223.5,510.5,242.5",
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			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 581 230.5 0 117 21 -trimmomatic_java_opts ",
			fillcolor="#94DDF4",
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			width=1.8472];
		quality_score	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16 223.5 16 242.5 98 242.5 98 223.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 57 230.5 0 66 13 -quality_score ",
			fillcolor="#94DDF4",
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			label=quality_score,
			pos="57,233",
			rects="16,223.5,98,242.5",
			width=1.1389];
	}
	subgraph cluster_outputs {
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			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 329 15 0 92 16 -Workflow Outputs ",
			bb="275,8,659,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="329,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
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			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 372 42.5 0 162 31 -output_data_fastq_trimmed_files ",
			fillcolor="#94DDF4",
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			pos="372,45",
			rects="283,35.5,461,54.5",
			width=2.4722];
		output_trimmed_fastq_read_count	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 465.5 35.5 465.5 54.5 650.5 54.5 650.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 558 42.5 0 169 31 -output_trimmed_fastq_read_count ",
			fillcolor="#94DDF4",
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			pos="558,45",
			rects="465.5,35.5,650.5,54.5",
			width=2.5694];
	}
	trimmomatic	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 350 170.5 350 189.5 430 189.5 430 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 390 177.5 0 64 11 -trimmomatic ",
		height=0.27778,
		label=trimmomatic,
		pos="390,180",
		rects="350,170.5,430,189.5",
		width=1.1111];
	trimmomatic_jar_path -> trimmomatic	[_draw_="c 7 -#000000 B 7 171.1 223.63 177.53 215.52 188.46 203.65 201 198 225.3 187.05 294.37 183.15 341.92 181.76 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 341.79 184.22 348.72 181.58 341.66 179.32 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 245 200.6 0 88 20 -trimmomatic_jar_path ",
		label=trimmomatic_jar_path,
		lp="245,202.5",
		pos="e,350.24,181.54 171.1,223.63 177.53,215.52 188.46,203.65 201,198 225.3,187.05 294.37,183.15 341.92,181.76"];
	input_fastq_files -> trimmomatic	[_draw_="c 7 -#000000 B 7 282.15 223.61 284.63 215.73 289.49 204.25 298 198 305.27 192.66 323.53 188.76 341.88 186.05 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 342.19 188.48 348.79 185.09 341.52 183.63 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 343.5 200.6 0 91 22 -input_read1_fastq_file ",
		label=input_read1_fastq_file,
		lp="343.5,202.5",
		pos="e,350.28,184.89 282.15,223.61 284.63,215.73 289.49,204.25 298,198 305.27,192.66 323.53,188.76 341.88,186.05"];
	input_adapters_files -> trimmomatic	[_draw_="c 7 -#000000 B 4 390 223.58 390 216.52 390 206.24 390 197.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 392.45 197.78 390 190.78 387.55 197.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 429.5 200.6 0 79 19 -input_adapters_file ",
		label=input_adapters_file,
		lp="429.5,202.5",
		pos="e,390,189.26 390,223.58 390,216.52 390,206.24 390,197.55"];
	nthreads -> trimmomatic	[_draw_="c 7 -#000000 B 7 480.6 223.75 479.76 215.98 477.28 204.56 470 198 464.84 193.35 451.95 189.77 437.98 187.13 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 438.5 184.73 431.18 185.93 437.65 189.55 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 494.5 200.6 0 37 8 -nthreads ",
		label=nthreads,
		lp="494.5,202.5",
		pos="e,429.69,185.67 480.6,223.75 479.76,215.98 477.28,204.56 470,198 464.84,193.35 451.95,189.77 437.98,187.13"];
	trimmomatic_java_opts -> trimmomatic	[_draw_="c 7 -#000000 B 7 567.71 223.57 554.58 215.66 533.67 204.15 514 198 489.62 190.38 461.48 186.17 438.18 183.85 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 438.53 181.42 431.33 183.22 438.08 186.3 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 555 200.6 0 40 9 -java_opts ",
		label=java_opts,
		lp="555,202.5",
		pos="e,429.83,183.08 567.71,223.57 554.58,215.66 533.67,204.15 514,198 489.62,190.38 461.48,186.17 438.18,183.85"];
	count_fastq_reads	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 458 80.5 458 99.5 564 99.5 564 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 511 87.5 0 90 17 -count_fastq_reads ",
		height=0.27778,
		label=count_fastq_reads,
		pos="511,90",
		rects="458,80.5,564,99.5",
		width=1.4722];
	count_fastq_reads -> output_trimmed_fastq_read_count	[_draw_="c 7 -#000000 B 4 520.06 80.71 526.56 74.76 535.47 66.61 543.02 59.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 544.34 61.82 547.85 55.29 541.03 58.2 ",
		pos="e,548.97,54.265 520.06,80.709 526.56,74.76 535.47,66.609 543.02,59.701"];
	extract_basename	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 457.5 125.5 457.5 144.5 564.5 144.5 564.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 511 132.5 0 91 16 -extract_basename ",
		height=0.27778,
		label=extract_basename,
		pos="511,135",
		rects="457.5,125.5,564.5,144.5",
		width=1.4861];
	extract_basename -> count_fastq_reads	[_draw_="c 7 -#000000 B 4 511 125.71 511 120.59 511 113.85 511 107.67 ",
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		label=input_basename,
		lp="545.5,112.5",
		pos="e,511,99.265 511,125.71 511,120.59 511,113.85 511,107.67"];
	trimmomatic -> output_data_fastq_trimmed_files	[_draw_="c 7 -#000000 B 7 386.67 170.81 385.67 168.05 384.66 164.93 384 162 376.19 127.26 373.45 85.5 372.49 62.77 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 374.94 62.68 372.24 55.78 370.05 62.86 ",
		pos="e,372.19,54.264 386.67,170.81 385.67,168.05 384.66,164.93 384,162 376.19,127.26 373.45,85.503 372.49,62.768"];
	trimmomatic -> count_fastq_reads	[_draw_="c 7 -#000000 B 7 387.76 170.66 385.2 159.07 382.58 138.07 393 125 406.78 107.7 428.78 98.84 450.06 94.42 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 450.23 96.88 456.67 93.21 449.35 92.06 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 424.5 133.1 0 63 16 -input_fastq_file ",
		label=input_fastq_file,
		lp="424.5,135",
		pos="e,458.16,92.933 387.76,170.66 385.2,159.07 382.58,138.07 393,125 406.78,107.7 428.78,98.841 450.06,94.419"];
	trimmomatic -> extract_basename	[_draw_="c 7 -#000000 B 4 413.91 170.5 432.63 163.85 458.85 154.53 479.33 147.26 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 480 155.6 0 38 10 -input_file ",
		label=input_file,
		lp="480,157.5",
		pos="e,487.14,144.48 413.91,170.5 432.63,163.85 458.85,154.53 479.33,147.26"];
}
