digraph workflow {
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		bb="0,0,1167,278",
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	edge [arrowsize=0.7,
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		fontcolor=black,
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	subgraph cluster_inputs {
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			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 150 230.5 0 252 51 -Filename for Pfam inconsistent structural instances ",
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			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 786 230.5 0 166 37 -Directory for storing all SIFTS files ",
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			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1016 230.5 0 253 51 -Filename for CATH inconsistent structural instances ",
			fillcolor="#94DDF4",
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			pos="1016,233",
			rects="881.5,223.5,1150.5,242.5",
			width=3.7361];
		family_idsfile	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 288.5 223.5 288.5 242.5 481.5 242.5 481.5 223.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 385 230.5 0 177 38 -File with the family IDs per iteration ",
			fillcolor="#94DDF4",
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			pos="385,233",
			rects="288.5,223.5,481.5,242.5",
			width=2.6806];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 423 8 423 63 1067 63 1067 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 477 15 0 92 16 -Workflow Outputs ",
			bb="423,8,1067,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="477,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
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		pfam_total_lost_structures	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 431 35.5 431 54.5 757 54.5 757 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 594 42.5 0 310 62 -Obsolete and inconsistent domain structural instances together ",
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			pos="594,45",
			rects="431,35.5,757,54.5",
			width=4.5278];
		pfam_domain_posi_file	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 761.5 35.5 761.5 54.5 1058.5 54.5 1058.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 910 42.5 0 281 54 -All residue-mapped domain instances with domain labels ",
			fillcolor="#94DDF4",
			height=0.27778,
			label="All residue-mapped domain instances with domain labels",
			pos="910,45",
			rects="761.5,35.5,1058.5,54.5",
			width=4.125];
	}
	filter_pfam_structures	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 450 170.5 450 189.5 726 189.5 726 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 588 177.5 0 260 56 -Filter all structural instances for given Pfam families. ",
		height=0.27778,
		label="Filter all structural instances for given Pfam families.",
		pos="588,180",
		rects="450,170.5,726,189.5",
		width=3.8333];
	min_dom_size -> filter_pfam_structures	[_draw_="c 7 -#000000 B 4 588 223.58 588 216.52 588 206.24 588 197.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 590.45 197.78 588 190.78 585.55 197.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 615 200.6 0 54 11 -min_dom_len ",
		label=min_dom_len,
		lp="615,202.5",
		pos="e,588,189.26 588,223.58 588,216.52 588,206.24 588,197.55"];
	collect_lost_instances	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 414.5 80.5 414.5 99.5 761.5 99.5 761.5 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 588 87.5 0 331 69 -Changes the format for core structural instances (only 1st iteration) ",
		height=0.27778,
		label="Changes the format for core structural instances (only 1st iteration)",
		pos="588,90",
		rects="414.5,80.5,761.5,99.5",
		width=4.8194];
	lost_merged -> collect_lost_instances	[_draw_="c 7 -#000000 B 4 176.09 223.6 251.39 199.36 469.12 129.27 553.77 102.02 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 554.42 104.38 560.33 99.91 552.92 99.72 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 407.5 155.6 0 27 7 -outfile ",
		label=outfile,
		lp="407.5,157.5",
		pos="e,561.77,99.443 176.09,223.6 251.39,199.36 469.12,129.27 553.77,102.02"];
	resmapping_pfam_structs	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 639.5 125.5 639.5 144.5 906.5 144.5 906.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 773 132.5 0 251 48 -Mapping of residue numbering from UniProt to PDB ",
		fillcolor="#F3CEA1",
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		label="Mapping of residue numbering from UniProt to PDB",
		pos="773,135",
		rects="639.5,125.5,906.5,144.5",
		width=3.7083];
	siftsdir -> resmapping_pfam_structs	[_draw_="c 7 -#000000 B 4 784.89 223.82 782.76 208.09 778.06 173.4 775.25 152.63 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 777.71 152.55 774.35 145.94 772.86 153.2 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 789 178.1 0 18 5 -sifts ",
		label=sifts,
		lp="789,180",
		pos="e,774.14,144.44 784.89,223.82 782.76,208.09 778.06,173.4 775.25,152.63"];
	add_domain_positions	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 766 80.5 766 99.5 1060 99.5 1060 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 913 87.5 0 278 54 -Add domain position labels to residue-mapped instances ",
		height=0.27778,
		label="Add domain position labels to residue-mapped instances",
		pos="913,90",
		rects="766,80.5,1060,99.5",
		width=4.0833];
	resmapped_file -> add_domain_positions	[_draw_="c 7 -#000000 B 4 1009.87 223.6 992.94 200.43 945.4 135.35 923.86 105.86 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 925.97 104.61 919.87 100.4 922.02 107.5 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 992 155.6 0 56 13 -dom_posi_file ",
		label=dom_posi_file,
		lp="992,157.5",
		pos="e,918.97,99.177 1009.9,223.6 992.94,200.43 945.4,135.35 923.86,105.86"];
	family_idsfile -> filter_pfam_structures	[_draw_="c 7 -#000000 B 4 418.52 223.58 453.64 214.76 508.84 200.89 546.64 191.39 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 546.77 193.88 552.96 189.8 545.57 189.13 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 538.5 200.6 0 45 10 -track_fams ",
		label=track_fams,
		lp="538.5,202.5",
		pos="e,554.43,189.43 418.52,223.58 453.64,214.76 508.84,200.89 546.64,191.39"];
	add_domain_positions -> pfam_domain_posi_file	[_draw_="c 7 -#000000 B 4 912.42 80.71 912.06 75.59 911.59 68.85 911.16 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 913.61 62.59 910.68 55.78 908.73 62.93 ",
		pos="e,910.58,54.265 912.42,80.709 912.06,75.593 911.59,68.848 911.16,62.666"];
	resmapping_pfam_structs -> add_domain_positions	[_draw_="c 7 -#000000 B 7 794.55 125.57 808.75 120.17 827.84 113.23 845 108 852.35 105.76 860.21 103.59 867.89 101.59 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 868.47 103.97 874.64 99.87 867.26 99.23 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 879 110.6 0 68 15 -resmapped_files ",
		label=resmapped_files,
		lp="879,112.5",
		pos="e,876.11,99.498 794.55,125.57 808.75,120.17 827.84,113.23 845,108 852.35,105.76 860.21,103.59 867.89,101.59"];
	resmapping_pfam_structs -> collect_lost_instances	[_draw_="c 7 -#000000 B 4 736.45 125.5 706.68 118.58 664.52 108.79 632.73 101.4 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 633.32 99.02 625.95 99.82 632.21 103.79 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 724.5 110.6 0 55 13 -lost_instance ",
		label=lost_instance,
		lp="724.5,112.5",
		pos="e,624.47,99.478 736.45,125.5 706.68,118.58 664.52,108.79 632.73,101.4"];
	collect_lost_instances -> pfam_total_lost_structures	[_draw_="c 7 -#000000 B 4 589.16 80.71 589.87 75.59 590.81 68.85 591.67 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 594.1 63.04 592.64 55.76 589.24 62.36 ",
		pos="e,592.85,54.265 589.16,80.709 589.87,75.593 590.81,68.848 591.67,62.666"];
	filter_pfam_structures -> resmapping_pfam_structs	[_draw_="c 7 -#000000 B 4 624.55 170.5 654.32 163.58 696.48 153.79 728.27 146.4 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 712 155.6 0 30 9 -flt_files ",
		label=flt_files,
		lp="712,157.5",
		pos="e,736.53,144.48 624.55,170.5 654.32,163.58 696.48,153.79 728.27,146.4"];
	filter_pfam_structures -> collect_lost_instances	[_draw_="c 7 -#000000 B 4 588 170.56 588 156.14 588 126.48 588 107.73 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 590.45 107.8 588 100.8 585.55 107.8 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 608 133.1 0 40 9 -obs_insta ",
		label=obs_insta,
		lp="608,135",
		pos="e,588,99.284 588,170.56 588,156.14 588,126.48 588,107.73"];
}