digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 323 709 323 709 0 ",
		bb="0,0,709,323",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
	];
	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 248 260 248 315 548 315 548 260 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 298 303 0 84 15 -Workflow Inputs ",
			bb="248,260,548,315",
			label="Workflow Inputs",
			lheight=0.15,
			lp="298,305.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		input_fastq_files	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 256.5 268.5 256.5 287.5 353.5 287.5 353.5 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 305 275.5 0 81 17 -input_fastq_files ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=input_fastq_files,
			pos="305,278",
			rects="256.5,268.5,353.5,287.5",
			width=1.3472];
		default_adapters_file	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 420.5 268.5 420.5 287.5 539.5 287.5 539.5 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 480 275.5 0 103 21 -default_adapters_file ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=default_adapters_file,
			pos="480,278",
			rects="420.5,268.5,539.5,287.5",
			width=1.6528];
		nthreads	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 357.5 268.5 357.5 287.5 416.5 287.5 416.5 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 387 275.5 0 43 8 -nthreads ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=nthreads,
			pos="387,278",
			rects="357.5,268.5,416.5,287.5",
			width=0.81944];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 8 8 63 701 63 701 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 62 15 0 92 16 -Workflow Outputs ",
			bb="8,8,701,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="62,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		output_fastqc_report_files	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 549.5 35.5 549.5 54.5 692.5 54.5 692.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 621 42.5 0 127 26 -output_fastqc_report_files ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=output_fastqc_report_files,
			pos="621,45",
			rects="549.5,35.5,692.5,54.5",
			width=1.9861];
		output_custom_adapters	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 408.5 35.5 408.5 54.5 545.5 54.5 545.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 477 42.5 0 121 22 -output_custom_adapters ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=output_custom_adapters,
			pos="477,45",
			rects="408.5,35.5,545.5,54.5",
			width=1.9028];
		output_fastqc_data_files	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 268 35.5 268 54.5 404 54.5 404 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 336 42.5 0 120 24 -output_fastqc_data_files ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=output_fastqc_data_files,
			pos="336,45",
			rects="268,35.5,404,54.5",
			width=1.8889];
		output_count_raw_reads	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16 35.5 16 54.5 152 54.5 152 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 84 42.5 0 120 22 -output_count_raw_reads ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=output_count_raw_reads,
			pos="84,45",
			rects="16,35.5,152,54.5",
			width=1.8889];
		output_diff_counts	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 156.5 35.5 156.5 54.5 263.5 54.5 263.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 210 42.5 0 91 18 -output_diff_counts ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=output_diff_counts,
			pos="210,45",
			rects="156.5,35.5,263.5,54.5",
			width=1.4861];
	}
	count_raw_reads	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 57.5 125.5 57.5 144.5 156.5 144.5 156.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 107 132.5 0 83 15 -count_raw_reads ",
		height=0.27778,
		label=count_raw_reads,
		pos="107,135",
		rects="57.5,125.5,156.5,144.5",
		width=1.375];
	input_fastq_files -> count_raw_reads	[_draw_="c 7 -#000000 B 7 256.77 271.16 215.26 263.54 156.87 246.19 123 207 109.88 191.82 106.88 168.14 106.49 152.36 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 108.94 152.62 106.51 145.62 104.04 152.61 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 154.5 200.6 0 63 16 -input_fastq_file ",
		label=input_fastq_file,
		lp="154.5,202.5",
		pos="e,106.51,144.1 256.77,271.16 215.26,263.54 156.87,246.19 123,207 109.88,191.82 106.88,168.14 106.49,152.36"];
	extract_basename	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 214.5 215.5 214.5 234.5 321.5 234.5 321.5 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 268 222.5 0 91 16 -extract_basename ",
		height=0.27778,
		label=extract_basename,
		pos="268,225",
		rects="214.5,215.5,321.5,234.5",
		width=1.4861];
	input_fastq_files -> extract_basename	[_draw_="c 7 -#000000 B 7 288.99 268.51 282.71 264.36 276.05 258.79 272 252 270.31 249.17 269.26 245.86 268.61 242.58 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 271.07 242.47 267.88 235.77 266.19 242.99 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 291 245.6 0 38 10 -input_file ",
		label=input_file,
		lp="291,247.5",
		pos="e,267.72,234.27 288.99,268.51 282.71,264.36 276.05,258.79 272,252 270.31,249.17 269.26,245.86 268.61,242.58"];
	fastqc	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 357.5 215.5 357.5 234.5 404.5 234.5 404.5 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 381 222.5 0 31 6 -fastqc ",
		height=0.27778,
		label=fastqc,
		pos="381,225",
		rects="357.5,215.5,404.5,234.5",
		width=0.65278];
	input_fastq_files -> fastqc	[_draw_="c 7 -#000000 B 7 306.32 268.51 307.97 260.78 311.54 249.6 319 243 327.38 235.59 338.7 231.38 349.37 228.99 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 349.8 231.41 356.24 227.72 348.91 226.59 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 350.5 245.6 0 63 16 -input_fastq_file ",
		label=input_fastq_file,
		lp="350.5,247.5",
		pos="e,357.73,227.45 306.32,268.51 307.97,260.78 311.54,249.6 319,243 327.38,235.59 338.7,231.38 349.37,228.99"];
	overrepresented_sequence_extract	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 362 125.5 362 144.5 550 144.5 550 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 456 132.5 0 172 32 -overrepresented_sequence_extract ",
		height=0.27778,
		label=overrepresented_sequence_extract,
		pos="456,135",
		rects="362,125.5,550,144.5",
		width=2.6111];
	default_adapters_file -> overrepresented_sequence_extract	[_draw_="c 7 -#000000 B 7 489.76 268.57 510.06 249.98 553.19 204.42 531 170 524.39 159.75 513.86 152.55 502.75 147.52 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 503.82 145.31 496.41 144.93 501.97 149.84 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 579.5 200.6 0 87 21 -default_adapters_file ",
		label=default_adapters_file,
		lp="579.5,202.5",
		pos="e,495.01,144.36 489.76,268.57 510.06,249.98 553.19,204.42 531,170 524.39,159.75 513.86,152.55 502.75,147.52"];
	nthreads -> fastqc	[_draw_="c 7 -#000000 B 4 386.01 268.58 385.18 261.52 383.97 251.24 382.95 242.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 385.4 242.43 382.15 235.77 380.53 243.01 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 400 245.6 0 32 7 -threads ",
		label=threads,
		lp="400,247.5",
		pos="e,381.97,234.26 386.01,268.58 385.18,261.52 383.97,251.24 382.95,242.55"];
	compare_read_counts	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 148 80.5 148 99.5 272 99.5 272 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 210 87.5 0 108 19 -compare_read_counts ",
		height=0.27778,
		label=compare_read_counts,
		pos="210,90",
		rects="148,80.5,272,99.5",
		width=1.7222];
	compare_read_counts -> output_diff_counts	[_draw_="c 7 -#000000 B 4 210 80.71 210 75.59 210 68.85 210 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 212.45 62.78 210 55.78 207.55 62.78 ",
		pos="e,210,54.265 210,80.709 210,75.593 210,68.848 210,62.666"];
	count_raw_reads -> output_count_raw_reads	[_draw_="c 7 -#000000 B 4 104.79 125.56 101.01 111.07 93.2 81.21 88.3 62.47 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 90.69 61.9 86.55 55.75 85.95 63.14 ",
		pos="e,86.165,54.284 104.79,125.56 101.01,111.07 93.201,81.205 88.305,62.471"];
	count_raw_reads -> compare_read_counts	[_draw_="c 7 -#000000 B 4 127.35 125.5 143.01 118.97 164.82 109.86 182.11 102.64 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 182.78 105.02 188.3 100.06 180.89 100.5 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 177.5 110.6 0 19 5 -file1 ",
		label=file1,
		lp="177.5,112.5",
		pos="e,189.69,99.478 127.35,125.5 143.01,118.97 164.82,109.86 182.11,102.64"];
	extract_fastqc_data	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 314.5 170.5 314.5 189.5 427.5 189.5 427.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 371 177.5 0 97 19 -extract_fastqc_data ",
		height=0.27778,
		label=extract_fastqc_data,
		pos="371,180",
		rects="314.5,170.5,427.5,189.5",
		width=1.5694];
	extract_fastqc_data -> output_fastqc_data_files	[_draw_="c 7 -#000000 B 7 368.11 170.67 365.78 163.82 362.5 153.84 360 145 351.86 116.2 344 82.22 339.6 62.49 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 342.01 62.05 338.11 55.75 337.23 63.11 ",
		pos="e,337.78,54.268 368.11,170.67 365.78,163.82 362.5,153.84 360,145 351.86,116.2 344,82.224 339.6,62.494"];
	count_fastqc_reads	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 185.5 125.5 185.5 144.5 296.5 144.5 296.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 241 132.5 0 95 18 -count_fastqc_reads ",
		height=0.27778,
		label=count_fastqc_reads,
		pos="241,135",
		rects="185.5,125.5,296.5,144.5",
		width=1.5417];
	extract_fastqc_data -> count_fastqc_reads	[_draw_="c 7 -#000000 B 7 315.14 170.5 295.52 167.29 277.26 163.94 273 162 266.49 159.04 260.2 154.43 254.93 149.92 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 256.81 148.32 250 145.39 253.5 151.93 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 309.5 155.6 0 73 17 -input_fastqc_data ",
		label=input_fastqc_data,
		lp="309.5,157.5",
		pos="e,248.88,144.37 315.14,170.5 295.52,167.29 277.26,163.94 273,162 266.49,159.04 260.2,154.43 254.93,149.92"];
	extract_fastqc_data -> overrepresented_sequence_extract	[_draw_="c 7 -#000000 B 7 371.8 170.57 372.79 164.81 375.01 157.45 380 153 381.84 151.35 383.81 149.86 385.88 148.49 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 387.01 150.67 391.91 145.11 384.61 146.4 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 416.5 155.6 0 73 17 -input_fastqc_data ",
		label=input_fastqc_data,
		lp="416.5,157.5",
		pos="e,393.23,144.37 371.8,170.57 372.79,164.81 375.01,157.45 380,153 381.84,151.35 383.81,149.86 385.88,148.49"];
	extract_basename -> count_raw_reads	[_draw_="c 7 -#000000 B 7 233.99 215.61 214.49 209.98 189.99 201.48 170 190 151.06 179.13 132.47 162.2 120.44 150.2 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 122.5 148.79 115.85 145.51 119 152.22 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 204.5 178.1 0 69 14 -input_basename ",
		label=input_basename,
		lp="204.5,180",
		pos="e,114.79,144.43 233.99,215.61 214.49,209.98 189.99,201.48 170,190 151.06,179.13 132.47,162.2 120.44,150.2"];
	extract_basename -> extract_fastqc_data	[_draw_="c 7 -#000000 B 7 277.76 215.66 284.89 209.95 295.02 202.61 305 198 309.98 195.7 315.32 193.68 320.73 191.91 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 321.24 194.31 327.22 189.93 319.81 189.63 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 339.5 200.6 0 69 14 -input_basename ",
		label=input_basename,
		lp="339.5,202.5",
		pos="e,328.67,189.49 277.76,215.66 284.89,209.95 295.02,202.61 305,198 309.98,195.7 315.32,193.68 320.73,191.91"];
	extract_basename -> count_fastqc_reads	[_draw_="c 7 -#000000 B 7 259.97 215.54 254.39 209.09 247.37 199.69 244 190 239.8 177.95 239.22 163.47 239.59 152.54 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 242.02 152.97 239.98 145.83 237.13 152.68 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 278.5 178.1 0 69 14 -input_basename ",
		label=input_basename,
		lp="278.5,180",
		pos="e,240.07,144.32 259.97,215.54 254.39,209.09 247.37,199.69 244,190 239.8,177.95 239.22,163.47 239.59,152.54"];
	extract_basename -> overrepresented_sequence_extract	[_draw_="c 7 -#000000 B 10 321.04 218.43 332.56 217.26 344.69 216.06 356 215 366.44 214.02 442.59 214.41 450 207 464.02 192.97 462.83 168.67 \
459.99 152.46 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 462.45 152.25 458.63 145.89 457.65 153.24 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 495.5 178.1 0 69 14 -input_basename ",
		label=input_basename,
		lp="495.5,180",
		pos="e,458.32,144.41 321.04,218.43 332.56,217.26 344.69,216.06 356,215 366.44,214.02 442.59,214.41 450,207 464.02,192.97 462.83,168.67 \
459.99,152.46"];
	count_fastqc_reads -> compare_read_counts	[_draw_="c 7 -#000000 B 4 235.02 125.71 230.99 120.12 225.56 112.58 220.78 105.96 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 222.92 104.74 216.84 100.49 218.95 107.6 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 237.5 110.6 0 19 5 -file2 ",
		label=file2,
		lp="237.5,112.5",
		pos="e,215.96,99.265 235.02,125.71 230.99,120.12 225.56,112.58 220.78,105.96"];
	fastqc -> output_fastqc_report_files	[_draw_="c 7 -#000000 B 7 404.34 223.91 435.32 222.69 490.48 216.57 528 190 574.64 156.97 603.64 92.46 615.22 62.29 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 617.47 63.25 617.61 55.84 612.88 61.55 ",
		pos="e,618.14,54.42 404.34,223.91 435.32,222.69 490.48,216.57 528,190 574.64,156.97 603.64,92.46 615.22,62.288"];
	fastqc -> extract_fastqc_data	[_draw_="c 7 -#000000 B 4 379.07 215.71 377.85 210.47 376.24 203.53 374.78 197.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 377.24 197 373.27 190.74 372.46 198.11 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 416 200.6 0 80 20 -input_qc_report_file ",
		label=input_qc_report_file,
		lp="416,202.5",
		pos="e,372.92,189.27 379.07,215.71 377.85,210.47 376.24,203.53 374.78,197.24"];
	overrepresented_sequence_extract -> output_custom_adapters	[_draw_="c 7 -#000000 B 4 458.01 125.56 461.47 111.07 468.6 81.21 473.07 62.47 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 475.43 63.13 474.67 55.76 470.66 62 ",
		pos="e,475.02,54.284 458.01,125.56 461.47,111.07 468.6,81.205 473.07,62.471"];
}
