@prefix LoadListingRequirement: .
@prefix NetworkAccess: .
@prefix rdf: .
@prefix CommandLineBinding: .
@prefix xsd: .
@prefix DockerRequirement: .
@prefix Workflow: .
@prefix cwl: .
@prefix sld: .
@prefix rdfs: .
@prefix CommandOutputBinding: .
@prefix ns1: .
cwl:inputBinding [ CommandLineBinding:position
2 ] ;
sld:type xsd:string .
a cwl:CommandLineTool ;
cwl:arguments ( [ CommandLineBinding:shellQuote false ;
cwl:valueFrom "date\ntar cf hello.tar Hello.java\ndate\n"
]
) ;
cwl:arguments ( [ CommandLineBinding:shellQuote false ;
cwl:valueFrom "date\ntar cf hello.tar Hello.java\ndate\n"
]
) ;
cwl:outputs ;
cwl:requirements [ a cwl:ShellCommandRequirement ] ;
cwl:requirements [ a cwl:ShellCommandRequirement ] .
cwl:out ;
cwl:requirements [ a cwl:InitialWorkDirRequirement ;
cwl:listing [ cwl:entry "public class Hello {\n public static void main(String[] argv) {\n System.out.println(\"Hello from Java\");\n }\n}\n" ;
cwl:entryname "Hello.java"
]
] ;
cwl:run .
a cwl:Workflow ;
ns1:original_cwlVersion "v1.0" ;
Workflow:steps , ;
cwl:cwlVersion ;
cwl:hints [ a ;
NetworkAccess:networkAccess true
] ;
cwl:hints [ a ;
LoadListingRequirement:loadListing
"deep_listing"
] ;
cwl:inputs , ;
cwl:outputs .
cwl:source .
cwl:inputBinding [ CommandLineBinding:position
1 ] ;
sld:type cwl:File .
a cwl:CommandLineTool ;
ns1:original_cwlVersion "v1.0" ;
cwl:baseCommand ( "tar" "xf" ) ;
cwl:cwlVersion ;
cwl:hints [ a ;
LoadListingRequirement:loadListing
"deep_listing"
] ;
cwl:hints [ a ;
NetworkAccess:networkAccess true
] ;
cwl:inputs , ;
cwl:outputs .
cwl:outputSource ;
sld:type cwl:File .
cwl:in ;
cwl:out ;
cwl:run .
sld:type xsd:string .
cwl:source .
sld:type cwl:File .
cwl:outputBinding [ CommandOutputBinding:glob
"$(inputs.extractfile)" ] ;
sld:type cwl:File .
cwl:source .
a cwl:CommandLineTool ;
rdfs:label "Example trivial wrapper for Java 9 compiler" ;
ns1:original_cwlVersion "v1.0" ;
cwl:arguments ( "-d" "$(runtime.outdir)" ) ;
cwl:baseCommand ( "javac" ) ;
cwl:cwlVersion ;
cwl:hints [ a cwl:DockerRequirement ;
DockerRequirement:dockerPull "openjdk:9.0.1-11-slim"
] ;
cwl:hints [ a ;
NetworkAccess:networkAccess true
] ;
cwl:hints [ a ;
LoadListingRequirement:loadListing
"deep_listing"
] ;
cwl:inputs ;
cwl:outputs .
cwl:in , ;
cwl:out ;
cwl:run .
cwl:outputBinding [ CommandOutputBinding:glob
"*.class" ] ;
sld:type cwl:File .
cwl:in , ;
cwl:out ;
cwl:run .
cwl:default "Hello.java" .
cwl:source .
cwl:inputBinding [ CommandLineBinding:position
1 ] ;
sld:type cwl:File .
cwl:outputSource ;
sld:type cwl:File .
cwl:outputBinding [ CommandOutputBinding:glob
"hello.tar" ] ;
cwl:outputBinding [ CommandOutputBinding:glob
"hello.tar" ] ;
sld:type cwl:File .
a cwl:Workflow ;
rdfs:label "Nested workflow example" ;
ns1:original_cwlVersion "v1.0" ;
Workflow:steps , ;
cwl:cwlVersion ;
cwl:hints [ a ;
NetworkAccess:networkAccess true
] ;
cwl:hints [ a ;
LoadListingRequirement:loadListing
"deep_listing"
] ;
cwl:outputs ;
cwl:requirements [ a cwl:SubworkflowFeatureRequirement ] .