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			label=gene_expression_file,
			pos="3780,376",
			rects="3720.5,366.5,3839.5,385.5",
			width=1.6528];
		expn_val	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 2428.5 366.5 2428.5 385.5 2489.5 385.5 2489.5 366.5 ",
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			fillcolor="#94DDF4",
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			label=expn_val,
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			rects="2428.5,366.5,2489.5,385.5",
			width=0.84722];
		tdna_vaf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16.5 366.5 16.5 385.5 75.5 385.5 75.5 366.5 ",
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			fillcolor="#94DDF4",
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			label=tdna_vaf,
			pos="46,376",
			rects="16.5,366.5,75.5,385.5",
			width=0.81944];
		transcript_expression_file	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 2880 366.5 2880 385.5 3022 385.5 3022 366.5 ",
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			fillcolor="#94DDF4",
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			label=transcript_expression_file,
			pos="2951,376",
			rects="2880,366.5,3022,385.5",
			width=1.9722];
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			fillcolor="#94DDF4",
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			label=normal_sample_name,
			pos="142,376",
			rects="79.5,366.5,204.5,385.5",
			width=1.7361];
		variants_to_table_fields	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 3940.5 366.5 3940.5 385.5 4073.5 385.5 4073.5 366.5 ",
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			fillcolor="#94DDF4",
			height=0.27778,
			label=variants_to_table_fields,
			pos="4007,376",
			rects="3940.5,366.5,4073.5,385.5",
			width=1.8472];
	}
	pvacseq	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1458 88.5 1458 107.5 1536 107.5 1536 88.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1497 95.5 0 62 11 -run pVACseq ",
		height=0.27778,
		label="run pVACseq",
		pos="1497,98",
		rects="1458,88.5,1536,107.5",
		width=1.0833];
	exclude_nas -> pvacseq	[_draw_="c 7 -#000000 B 13 372.6 366.52 396.31 356.11 432 338.08 432 324 432 324 432 324 432 142 432 108.4 469.96 122.15 503 116 596.43 98.61 \
1264.88 98.56 1449.74 98.88 ",
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		label=exclude_nas,
		lp="457.5,233",
		pos="e,1458.2,98.9 372.6,366.52 396.31,356.11 432,338.08 432,324 432,324 432,324 432,142 432,108.4 469.96,122.15 503,116 596.43,98.606 \
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	epitope_lengths -> pvacseq	[_draw_="c 7 -#000000 B 13 463.63 366.62 480.47 358.51 501 344.44 501 324 501 324 501 324 501 142 501 84.38 570.74 122.37 628 116 789.33 \
98.06 1293.28 98.27 1450.01 98.79 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 534.5 231.1 0 67 15 -epitope_lengths ",
		label=epitope_lengths,
		lp="534.5,233",
		pos="e,1458.1,98.818 463.63,366.62 480.47,358.51 501,344.44 501,324 501,324 501,324 501,142 501,84.385 570.74,122.37 628,116 789.33,98.059 \
1293.3,98.267 1450,98.79"];
	prediction_algorithms -> pvacseq	[_draw_="c 7 -#000000 B 10 562.38 366.64 570.07 357.04 581 340.5 581 324 581 324 581 324 581 142 581 98.05 1262.76 97.93 1449.95 98.72 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1449.7 101.17 1456.71 98.75 1449.72 96.27 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 625.5 231.1 0 89 21 -prediction_algorithms ",
		label=prediction_algorithms,
		lp="625.5,233",
		pos="e,1458.2,98.761 562.38,366.64 570.07,357.04 581,340.5 581,324 581,324 581,324 581,142 581,98.049 1262.8,97.928 1449.9,98.724"];
	netmhc_stab -> pvacseq	[_draw_="c 7 -#000000 B 10 1275.72 366.68 1285.46 357.36 1299 341.3 1299 324 1299 324 1299 324 1299 142 1299 111.24 1391.42 102.44 1449.97 \
99.95 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1449.94 102.4 1456.84 99.69 1449.75 97.51 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1325.5 231.1 0 53 11 -netmhc_stab ",
		label=netmhc_stab,
		lp="1325.5,233",
		pos="e,1458.4,99.627 1275.7,366.68 1285.5,357.36 1299,341.3 1299,324 1299,324 1299,324 1299,142 1299,111.24 1391.4,102.44 1450,99.951"];
	maximum_transcript_support_level -> pvacseq	[_draw_="c 7 -#000000 B 10 1579.45 366.51 1564.7 358.01 1546 343.41 1546 324 1546 324 1546 324 1546 142 1546 128.82 1535.86 118.73 1524.8 \
111.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1526.09 109.57 1518.81 108.18 1523.64 113.81 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1617 231.1 0 142 32 -maximum_transcript_support_level ",
		label=maximum_transcript_support_level,
		lp="1617,233",
		pos="e,1517.5,107.43 1579.4,366.51 1564.7,358.01 1546,343.41 1546,324 1546,324 1546,324 1546,142 1546,128.82 1535.9,118.73 1524.8,111.65"];
	add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2925.5 178.5 2925.5 197.5 3068.5 197.5 3068.5 178.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2997 185.5 0 127 26 -add expression info to vcf ",
		height=0.27778,
		label="add expression info to vcf",
		pos="2997,188",
		rects="2925.5,178.5,3068.5,197.5",
		width=1.9861];
	expression_tool -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 13 3072.81 366.73 3072.21 348.55 3069.77 305.89 3060 296 3045.73 281.54 3029.31 302.41 3015 288 2988.95 261.77 3008.35 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3003.31 205.05 2999.39 198.76 2998.53 206.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3047 276.1 0 64 15 -expression_tool ",
		label=expression_tool,
		lp="3047,278",
		pos="e,2999.1,197.28 3072.8,366.73 3072.2,348.55 3069.8,305.89 3060,296 3045.7,281.54 3029.3,302.41 3015,288 2988.9,261.77 3008.3,242.23 \
3001,206 3001,205.82 3000.9,205.64 3000.9,205.46"];
	add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3047.5 223.5 3047.5 242.5 3190.5 242.5 3190.5 223.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3119 230.5 0 127 26 -add expression info to vcf ",
		height=0.27778,
		label="add expression info to vcf",
		pos="3119,233",
		rects="3047.5,223.5,3190.5,242.5",
		width=1.9861];
	expression_tool -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 10 3072.99 366.73 3073.18 348.48 3074.86 303.53 3086 268 3088.56 259.84 3089.36 257.42 3095 251 3096.06 249.79 3097.22 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3099.78 249.58 3103.71 243.29 3096.71 245.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3111 298.6 0 64 15 -expression_tool ",
		label=expression_tool,
		lp="3111,300.5",
		pos="e,3104.9,242.35 3073,366.73 3073.2,348.48 3074.9,303.53 3086,268 3088.6,259.84 3089.4,257.42 3095,251 3096.1,249.79 3097.2,248.62 \
3098.4,247.5"];
	tumor_rna_bam_readcount	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 3300 313.5 3300 332.5 3440 332.5 3440 313.5 ",
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		fillcolor="#F3CEA1",
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		label="bam_readcount workflow",
		pos="3370,323",
		rects="3300,313.5,3440,332.5",
		width=1.9444];
	sample_name -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 13 2663.82 366.62 2672.26 363.27 2682.45 359.79 2692 358 2763.66 344.54 2947.18 353.55 3020 350 3123.26 344.96 3148.9 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3291.82 332.45 3298.61 329.48 3291.44 327.57 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3166.5 343.6 0 31 6 -sample ",
		label=sample,
		lp="3166.5,345.5",
		pos="e,3300.1,329.36 2663.8,366.62 2672.3,363.27 2682.4,359.79 2692,358 2763.7,344.54 2947.2,353.55 3020,350 3123.3,344.96 3148.9,340.71 \
3252,333 3264.9,332.04 3278.6,331 3291.9,329.99"];
	add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 3150 268.5 3150 287.5 3394 287.5 3394 268.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3272 275.5 0 228 46 -Add snv and indel bam-readcount files to a vcf ",
		fillcolor="#F3CEA1",
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		label="Add snv and indel bam-readcount files to a vcf",
		pos="3272,278",
		rects="3150,268.5,3394,287.5",
		width=3.3889];
	sample_name -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 16 2663.82 366.62 2672.26 363.28 2682.45 359.8 2692 358 2760.37 345.11 2937.49 366.85 3005 350 3013.68 347.83 3014.35 \
343.28 3023 341 3089.7 323.43 3111.83 352.49 3178 333 3193.25 328.51 3229.29 306.44 3252.06 291.94 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3253.37 294 3257.94 288.16 3250.73 289.88 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3245 321.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="3245,323",
		pos="e,3259.2,287.35 2663.8,366.62 2672.3,363.28 2682.4,359.8 2692,358 2760.4,345.11 2937.5,366.85 3005,350 3013.7,347.83 3014.4,343.28 \
3023,341 3089.7,323.43 3111.8,352.49 3178,333 3193.2,328.51 3229.3,306.44 3252.1,291.94"];
	sample_name -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 10 2659.13 366.53 2693.28 346.43 2783.5 295.47 2865 268 2918.69 249.91 2951.33 284.41 2990 243 2999.25 233.09 3000.34 \
217.33 2999.5 205.39 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3001.96 205.36 2998.75 198.67 2997.09 205.9 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2894 276.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="2894,278",
		pos="e,2998.6,197.16 2659.1,366.53 2693.3,346.43 2783.5,295.47 2865,268 2918.7,249.91 2951.3,284.41 2990,243 2999.3,233.09 3000.3,217.33 \
2999.5,205.39"];
	sample_name -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 19 2664.29 366.53 2672.64 363.26 2682.64 359.86 2692 358 2769.67 342.58 2792.35 365.53 2870 350 2938.66 336.27 2949.5 \
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248.92 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3137.04 247.56 3130.82 243.52 3133.16 250.56 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3047 298.6 0 58 11 -sample_name ",
		label=sample_name,
		lp="3047,300.5",
		pos="e,3129.9,242.32 2664.3,366.53 2672.6,363.26 2682.6,359.86 2692,358 2769.7,342.58 2792.3,365.53 2870,350 2938.7,336.27 2949.5,310.51 \
3018,296 3030.9,293.28 3127,297.6 3136,288 3147.2,275.99 3142.3,266.19 3136,251 3135.7,250.29 3135.4,249.6 3135,248.92"];
	sample_name -> pvacseq	[_draw_="c 7 -#000000 B 13 2625.57 366.58 2602.76 356.07 2568 337.79 2568 324 2568 324 2568 324 2568 142 2568 90.56 2389.32 119.41 2338 116 \
2181.76 105.61 1697.14 100.7 1543.93 99.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1544.14 96.93 1537.12 99.32 1544.1 101.83 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2597 231.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="2597,233",
		pos="e,1535.6,99.306 2625.6,366.58 2602.8,356.07 2568,337.79 2568,324 2568,324 2568,324 2568,142 2568,90.563 2389.3,119.41 2338,116 2181.8,\
105.61 1697.1,100.7 1543.9,99.377"];
	top_score_metric -> pvacseq	[_draw_="c 7 -#000000 B 13 292.11 366.62 312.59 359.22 335 346.09 335 324 335 324 335 324 335 142 335 95.22 390.63 122.2 437 116 537.95 102.51 \
1256.79 99.64 1449.54 99.11 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1449.55 101.56 1456.54 99.09 1449.53 96.66 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 370 231.1 0 70 16 -top_score_metric ",
		label=top_score_metric,
		lp="370,233",
		pos="e,1458.1,99.086 292.11,366.62 312.59,359.22 335,346.09 335,324 335,324 335,324 335,142 335,95.217 390.63,122.2 437,116 537.95,102.51 \
1256.8,99.64 1449.5,99.109"];
	peptide_sequence_length -> pvacseq	[_draw_="c 7 -#000000 B 10 695.92 366.66 701.25 356.81 709 339.77 709 324 709 324 709 324 709 142 709 104.69 1279.57 99.74 1449.69 99.09 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 762 231.1 0 106 23 -peptide_sequence_length ",
		label=peptide_sequence_length,
		lp="762,233",
		pos="e,1458.2,99.065 695.92,366.66 701.25,356.81 709,339.77 709,324 709,324 709,324 709,142 709,104.69 1279.6,99.742 1449.7,99.095"];
	rnaseq_bam -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 7 3659.48 366.52 3652.27 363.48 3643.86 360.25 3636 358 3574.29 340.32 3501.9 331.82 3448.23 327.74 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3609.5 343.6 0 19 3 -bam ",
		label=bam,
		lp="3609.5,345.5",
		pos="e,3439.8,327.13 3659.5,366.52 3652.3,363.48 3643.9,360.25 3636,358 3574.3,340.32 3501.9,331.82 3448.2,327.74"];
	additional_report_columns -> pvacseq	[_draw_="c 7 -#000000 B 10 848.43 366.62 857.87 357.25 871 341.14 871 324 871 324 871 324 871 142 871 112.99 1304.39 102.49 1449.96 99.78 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 925.5 231.1 0 109 25 -additional_report_columns ",
		label=additional_report_columns,
		lp="925.5,233",
		pos="e,1458.3,99.624 848.43,366.62 857.87,357.25 871,341.14 871,324 871,324 871,324 871,142 871,112.99 1304.4,102.49 1450,99.777"];
	fasta_size -> pvacseq	[_draw_="c 7 -#000000 B 10 963.93 366.61 982.56 355.62 1012 336.31 1012 324 1012 324 1012 324 1012 142 1012 98.35 1327.71 97.14 1449.69 98.31 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1033 231.1 0 42 10 -fasta_size ",
		label=fasta_size,
		lp="1033,233",
		pos="e,1458.1,98.395 963.93,366.61 982.56,355.62 1012,336.31 1012,324 1012,324 1012,324 1012,142 1012,98.351 1327.7,97.145 1449.7,98.307"];
	phased_proximal_variants_vcf -> pvacseq	[_draw_="c 7 -#000000 B 10 1070.31 366.72 1071.8 356.65 1074 339.12 1074 324 1074 324 1074 324 1074 142 1074 104.55 1339.88 99.45 1450.05 \
98.95 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1449.84 101.4 1456.83 98.92 1449.82 96.5 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1135 231.1 0 122 28 -phased_proximal_variants_vcf ",
		label=phased_proximal_variants_vcf,
		lp="1135,233",
		pos="e,1458.3,98.919 1070.3,366.72 1071.8,356.65 1074,339.12 1074,324 1074,324 1074,324 1074,142 1074,104.55 1339.9,99.452 1450.1,98.949"];
	n_threads -> pvacseq	[_draw_="c 7 -#000000 B 10 1198.72 366.68 1208.46 357.36 1222 341.3 1222 324 1222 324 1222 324 1222 142 1222 119.21 1371.3 106.66 1449.88 \
101.63 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1449.84 104.09 1456.67 101.21 1449.53 99.2 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1242.5 231.1 0 41 9 -n_threads ",
		label=n_threads,
		lp="1242.5,233",
		pos="e,1458.2,101.11 1198.7,366.68 1208.5,357.36 1222,341.3 1222,324 1222,324 1222,324 1222,142 1222,119.21 1371.3,106.66 1449.9,101.63"];
	reference_fasta -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 7 3868.91 366.52 3860.11 363.33 3849.7 359.99 3840 358 3704.06 330.1 3541.91 324.25 3447.98 323.47 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3821.5 343.6 0 65 15 -reference_fasta ",
		label=reference_fasta,
		lp="3821.5,345.5",
		pos="e,3439.7,323.41 3868.9,366.52 3860.1,363.33 3849.7,359.99 3840,358 3704.1,330.1 3541.9,324.25 3448,323.47"];
	variants_to_table	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3819.5 88.5 3819.5 107.5 3960.5 107.5 3960.5 88.5 ",
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		height=0.27778,
		label="SelectVariants (GATK 3.6)",
		pos="3890,98",
		rects="3819.5,88.5,3960.5,107.5",
		width=1.9583];
	reference_fasta -> variants_to_table	[_draw_="c 7 -#000000 B 10 3890 366.7 3890 356.6 3890 339.05 3890 324 3890 324 3890 324 3890 142 3890 133.31 3890 123.63 3890 115.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3892.45 115.76 3890 108.76 3887.55 115.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3910 231.1 0 40 9 -reference ",
		label=reference,
		lp="3910,233",
		pos="e,3890,107.24 3890,366.7 3890,356.6 3890,339.05 3890,324 3890,324 3890,324 3890,142 3890,133.31 3890,123.63 3890,115.65"];
	normal_vaf -> pvacseq	[_draw_="c 7 -#000000 B 10 1352.53 366.5 1359.33 356.78 1369 340.12 1369 324 1369 324 1369 324 1369 142 1369 124.29 1413.58 112.51 1450.12 \
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1392 231.1 0 46 10 -normal_vaf ",
		label=normal_vaf,
		lp="1392,233",
		pos="e,1458.2,104.4 1352.5,366.5 1359.3,356.78 1369,340.12 1369,324 1369,324 1369,324 1369,142 1369,124.29 1413.6,112.51 1450.1,105.83"];
	net_chop_threshold -> pvacseq	[_draw_="c 7 -#000000 B 10 1443.31 366.72 1444.8 356.65 1447 339.12 1447 324 1447 324 1447 324 1447 142 1447 128.76 1457.21 118.7 1468.4 \
111.66 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1469.6 113.79 1474.48 108.21 1467.18 109.53 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1487.5 231.1 0 81 18 -net_chop_threshold ",
		label=net_chop_threshold,
		lp="1487.5,233",
		pos="e,1475.8,107.46 1443.3,366.72 1444.8,356.65 1447,339.12 1447,324 1447,324 1447,324 1447,142 1447,128.76 1457.2,118.7 1468.4,111.66"];
	variants_to_table_genotype_fields -> variants_to_table	[_draw_="c 7 -#000000 B 10 4129.97 366.55 4108.33 359.38 4086 346.52 4086 324 4086 324 4086 324 4086 142 4086 116.78 4023.28 106.33 3968.8 \
102.01 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3969.16 99.58 3961.99 101.51 3968.79 104.47 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 4119 231.1 0 66 15 -genotype_fields ",
		label=genotype_fields,
		lp="4119,233",
		pos="e,3960.5,101.4 4130,366.55 4108.3,359.38 4086,346.52 4086,324 4086,324 4086,324 4086,142 4086,116.78 4023.3,106.33 3968.8,102.01"];
	alleles -> pvacseq	[_draw_="c 7 -#000000 B 10 1715.53 366.73 1709.61 356.95 1701 339.98 1701 324 1701 324 1701 324 1701 142 1701 110.11 1604.35 101.75 1544.1 \
99.63 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1544.44 97.19 1537.36 99.42 1544.28 102.09 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1715 231.1 0 28 7 -alleles ",
		label=alleles,
		lp="1715,233",
		pos="e,1535.9,99.375 1715.5,366.73 1709.6,356.95 1701,339.98 1701,324 1701,324 1701,324 1701,142 1701,110.11 1604.3,101.75 1544.1,99.634"];
	readcount_minimum_base_quality -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 7 3234.69 366.57 3250.89 359.1 3275.67 348.27 3298 341 3305.26 338.64 3313.04 336.45 3320.7 334.49 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3321.25 336.88 3327.46 332.82 3320.08 332.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3333.5 343.6 0 71 16 -min_base_quality ",
		label=min_base_quality,
		lp="3333.5,345.5",
		pos="e,3328.9,332.46 3234.7,366.57 3250.9,359.1 3275.7,348.27 3298,341 3305.3,338.64 3313,336.45 3320.7,334.49"];
	detect_variants_vcf -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 4 3370 366.58 3370 359.52 3370 349.24 3370 340.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3372.45 340.78 3370 333.78 3367.55 340.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3376.5 343.6 0 13 3 -vcf ",
		label=vcf,
		lp="3376.5,345.5",
		pos="e,3370,332.26 3370,366.58 3370,359.52 3370,349.24 3370,340.55"];
	minimum_fold_change -> pvacseq	[_draw_="c 7 -#000000 B 10 1802.39 366.66 1791.22 357.56 1776 341.89 1776 324 1776 324 1776 324 1776 142 1776 118.83 1623.75 106.43 1544.19 \
101.53 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1544.44 99.09 1537.3 101.11 1544.14 103.98 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1822 231.1 0 92 19 -minimum_fold_change ",
		label=minimum_fold_change,
		lp="1822,233",
		pos="e,1535.8,101.02 1802.4,366.66 1791.2,357.56 1776,341.89 1776,324 1776,324 1776,324 1776,142 1776,118.83 1623.8,106.43 1544.2,101.53"];
	add_vep_fields_to_table	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3648.5 35.5 3648.5 54.5 3805.5 54.5 3805.5 35.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3727 42.5 0 141 28 -add VEP annotation to report ",
		height=0.27778,
		label="add VEP annotation to report",
		pos="3727,45",
		rects="3648.5,35.5,3805.5,54.5",
		width=2.1806];
	vep_to_table_fields -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 10 4283.88 366.6 4262.47 359.39 4240 346.47 4240 324 4240 324 4240 324 4240 97 4240 54.67 3959.87 47.05 3813.62 45.96 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 4261 208.6 0 42 10 -vep_fields ",
		label=vep_fields,
		lp="4261,210.5",
		pos="e,3805.5,45.903 4283.9,366.6 4262.5,359.39 4240,346.47 4240,324 4240,324 4240,324 4240,97 4240,54.672 3959.9,47.052 3813.6,45.958"];
	downstream_sequence_length -> pvacseq	[_draw_="c 7 -#000000 B 10 1943.37 366.62 1926.53 358.51 1906 344.44 1906 324 1906 324 1906 324 1906 142 1906 105.98 1651.89 100.03 1544.26 \
99.12 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1544.38 96.67 1537.36 99.07 1544.34 101.57 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1969 231.1 0 126 26 -downstream_sequence_length ",
		label=downstream_sequence_length,
		lp="1969,233",
		pos="e,1535.8,99.06 1943.4,366.62 1926.5,358.51 1906,344.44 1906,324 1906,324 1906,324 1906,142 1906,105.98 1651.9,100.03 1544.3,99.123"];
	normal_cov -> pvacseq	[_draw_="c 7 -#000000 B 10 2083.53 366.73 2077.61 356.95 2069 339.98 2069 324 2069 324 2069 324 2069 142 2069 115.75 1681.02 103.57 1544.13 \
100.09 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1544.44 97.65 1537.38 99.92 1544.32 102.55 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2092.5 231.1 0 47 10 -normal_cov ",
		label=normal_cov,
		lp="2092.5,233",
		pos="e,1535.9,99.885 2083.5,366.73 2077.6,356.95 2069,339.98 2069,324 2069,324 2069,324 2069,142 2069,115.75 1681,103.57 1544.1,100.09"];
	trna_vaf -> pvacseq	[_draw_="c 7 -#000000 B 10 2154.08 366.66 2148.75 356.81 2141 339.77 2141 324 2141 324 2141 324 2141 142 2141 112.07 1692.2 102.14 1543.92 \
99.68 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1544.39 97.24 1537.35 99.57 1544.31 102.14 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2158 231.1 0 34 8 -trna_vaf ",
		label=trna_vaf,
		lp="2158,233",
		pos="e,1535.8,99.55 2154.1,366.66 2148.8,356.81 2141,339.77 2141,324 2141,324 2141,324 2141,142 2141,112.07 1692.2,102.14 1543.9,99.682"];
	tdna_cov -> pvacseq	[_draw_="c 7 -#000000 B 10 2216.53 366.73 2210.61 356.95 2202 339.98 2202 324 2202 324 2202 324 2202 142 2202 108.95 1701.76 101.07 1544.04 \
99.4 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1544.45 96.96 1537.42 99.34 1544.4 101.86 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2220.5 231.1 0 37 8 -tdna_cov ",
		label=tdna_cov,
		lp="2220.5,233",
		pos="e,1535.9,99.321 2216.5,366.73 2210.6,356.95 2202,339.98 2202,324 2202,324 2202,324 2202,142 2202,108.95 1701.8,101.07 1544,99.405"];
	net_chop_method -> pvacseq	[_draw_="c 7 -#000000 B 10 2299.87 366.56 2290.72 357.14 2278 340.99 2278 324 2278 324 2278 324 2278 142 2278 105.06 1713.77 99.85 1544.47 \
99.12 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1544.52 96.67 1537.51 99.09 1544.5 101.57 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2314.5 231.1 0 73 15 -net_chop_method ",
		label=net_chop_method,
		lp="2314.5,233",
		pos="e,1536,99.085 2299.9,366.56 2290.7,357.14 2278,340.99 2278,324 2278,324 2278,324 2278,142 2278,105.06 1713.8,99.852 1544.5,99.119"];
	readcount_minimum_mapping_quality -> tumor_rna_bam_readcount	[_draw_="c 7 -#000000 B 4 3506.08 366.58 3478.36 357.9 3435.04 344.35 3404.75 334.87 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3405.81 332.64 3398.4 332.89 3404.35 337.31 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3494.5 343.6 0 87 19 -min_mapping_quality ",
		label=min_mapping_quality,
		lp="3494.5,345.5",
		pos="e,3397,332.43 3506.1,366.58 3478.4,357.9 3435,344.35 3404.7,334.87"];
	trna_cov -> pvacseq	[_draw_="c 7 -#000000 B 10 2384.98 366.74 2374.95 357.47 2361 341.45 2361 324 2361 324 2361 324 2361 142 2361 100.76 1724.93 98.63 1544.31 \
98.86 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1544.31 96.41 1537.32 98.87 1544.32 101.31 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2378.5 231.1 0 35 8 -trna_cov ",
		label=trna_cov,
		lp="2378.5,233",
		pos="e,1535.8,98.873 2385,366.74 2375,357.47 2361,341.45 2361,324 2361,324 2361,324 2361,142 2361,100.76 1724.9,98.634 1544.3,98.861"];
	gene_expression_file -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 7 3773.27 366.64 3766.48 358.78 3755.26 347.31 3743 341 3649.06 292.66 3344.33 256.58 3198.36 241.61 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3198.97 239.21 3191.76 240.94 3198.47 244.08 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3654.5 298.6 0 61 15 -expression_file ",
		label=expression_file,
		lp="3654.5,300.5",
		pos="e,3190.3,240.78 3773.3,366.64 3766.5,358.78 3755.3,347.31 3743,341 3649.1,292.66 3344.3,256.58 3198.4,241.61"];
	expn_val -> pvacseq	[_draw_="c 7 -#000000 B 10 2445.39 366.68 2432.8 357.82 2416 342.53 2416 324 2416 324 2416 324 2416 142 2416 97.91 1732.01 97.89 1544.2 98.72 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1544.4 96.26 1537.41 98.75 1544.43 101.16 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2434 231.1 0 36 8 -expn_val ",
		label=expn_val,
		lp="2434,233",
		pos="e,1535.9,98.754 2445.4,366.68 2432.8,357.82 2416,342.53 2416,324 2416,324 2416,324 2416,142 2416,97.905 1732,97.889 1544.2,98.716"];
	tdna_vaf -> pvacseq	[_draw_="c 7 -#000000 B 13 55.13 366.56 64.28 357.14 77 340.99 77 324 77 324 77 324 77 142 77 86.13 144.47 122.17 200 116 325.82 102.01 1231.35 \
99.48 1449.71 99.07 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1449.58 101.52 1456.58 99.06 1449.57 96.62 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 95 231.1 0 36 8 -tdna_vaf ",
		label=tdna_vaf,
		lp="95,233",
		pos="e,1458.1,99.057 55.133,366.56 64.278,357.14 77,340.99 77,324 77,324 77,324 77,142 77,86.125 144.47,122.17 200,116 325.82,102.01 \
1231.4,99.481 1449.7,99.073"];
	transcript_expression_file -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 10 2948.86 366.57 2941.61 337.96 2918.39 246.17 2918 243 2916.91 234.18 2913.52 230.68 2918 223 2923.99 212.73 2933.89 \
205.56 2944.7 200.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2945.35 202.93 2950.89 198 2943.48 198.4 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2958.5 276.1 0 61 15 -expression_file ",
		label=expression_file,
		lp="2958.5,278",
		pos="e,2952.3,197.42 2948.9,366.57 2941.6,337.96 2918.4,246.17 2918,243 2916.9,234.18 2913.5,230.68 2918,223 2924,212.73 2933.9,205.56 \
2944.7,200.55"];
	normal_sample_name -> pvacseq	[_draw_="c 7 -#000000 B 13 161.9 366.65 178 358.41 198 344.12 198 324 198 324 198 324 198 142 198 78.71 275.02 122.26 338 116 449.66 104.89 \
1246.57 100.24 1449.88 99.22 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1449.77 101.67 1456.76 99.19 1449.74 96.77 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 243 231.1 0 90 18 -normal_sample_name ",
		label=normal_sample_name,
		lp="243,233",
		pos="e,1458.3,99.179 161.9,366.65 178,358.41 198,344.12 198,324 198,324 198,324 198,142 198,78.714 275.02,122.26 338,116 449.66,104.89 \
1246.6,100.24 1449.9,99.22"];
	variants_to_table_fields -> variants_to_table	[_draw_="c 7 -#000000 B 10 3996.69 366.8 3986.36 357.59 3972 341.61 3972 324 3972 324 3972 324 3972 142 3972 126.67 3960.62 116.79 3946.34 \
110.43 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3947.47 108.25 3940.06 107.97 3945.68 112.81 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3983.5 231.1 0 23 6 -fields ",
		label=fields,
		lp="3983.5,233",
		pos="e,3938.6,107.42 3996.7,366.8 3986.4,357.59 3972,341.61 3972,324 3972,324 3972,324 3972,142 3972,126.67 3960.6,116.79 3946.3,110.43"];
	tumor_rna_bam_readcount -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 3366.01 313.7 3362.78 307.85 3357.66 300.32 3351 296 3347.87 293.97 3344.54 292.18 3341.08 290.59 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3342.15 288.38 3334.74 288.02 3340.31 292.92 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3365.5 298.6 0 13 3 -vcf ",
		label=vcf,
		lp="3365.5,300.5",
		pos="e,3333.3,287.46 3366,313.7 3362.8,307.85 3357.7,300.32 3351,296 3347.9,293.97 3344.5,292.18 3341.1,290.59"];
	tumor_rna_bam_readcount -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 3373.82 313.81 3375.83 308.18 3377.11 300.86 3373 296 3371.13 293.79 3368.11 291.87 3364.26 290.2 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3365.35 287.99 3357.93 287.96 3363.71 292.61 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3427 298.6 0 104 23 -indel_bam_readcount_tsv ",
		label=indel_bam_readcount_tsv,
		lp="3427,300.5",
		pos="e,3356.5,287.46 3373.8,313.81 3375.8,308.18 3377.1,300.86 3373,296 3371.1,293.79 3368.1,291.87 3364.3,290.2"];
	tumor_rna_bam_readcount -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 3300.14 319.54 3278.65 317.21 3258.84 312.9 3252 305 3248.77 301.27 3250.02 297.09 3253.08 293.19 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3254.63 295.1 3257.92 288.45 3251.2 291.59 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3301 298.6 0 98 21 -snv_bam_readcount_tsv ",
		label=snv_bam_readcount_tsv,
		lp="3301,300.5",
		pos="e,3259,287.39 3300.1,319.54 3278.7,317.21 3258.8,312.9 3252,305 3248.8,301.27 3250,297.09 3253.1,293.19"];
	index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3471 133.5 3471 152.5 3533 152.5 3533 133.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3502 140.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="3502,143",
		rects="3471,133.5,3533,152.5",
		width=0.86111];
	index -> variants_to_table	[_draw_="c 7 -#000000 B 7 3532.81 139.98 3572.8 137.24 3644.72 131.88 3706 125 3746.51 120.45 3791.87 114.06 3827.41 108.75 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3782.5 118.6 0 13 3 -vcf ",
		label=vcf,
		lp="3782.5,120.5",
		pos="e,3835.8,107.5 3532.8,139.98 3572.8,137.24 3644.7,131.88 3706,125 3746.5,120.45 3791.9,114.06 3827.4,108.75"];
	index -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 4 3521.57 133.65 3561.72 116.52 3653.45 77.38 3699.53 57.72 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3700.44 60 3705.92 54.99 3698.52 55.49 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3631.5 96.1 0 13 3 -vcf ",
		label=vcf,
		lp="3631.5,98",
		pos="e,3707.3,54.4 3521.6,133.65 3561.7,116.52 3653.5,77.38 3699.5,57.722"];
	index -> pvacseq	[_draw_="c 7 -#000000 B 7 3471.1 141 3353.85 137.23 2925.24 123.73 2572 116 2174.11 107.29 1693.29 101.3 1543.69 99.54 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1544.11 97.09 1537.08 99.46 1544.05 101.99 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2947.5 118.6 0 37 9 -input_vcf ",
		label=input_vcf,
		lp="2947.5,120.5",
		pos="e,1535.6,99.441 3471.1,141 3353.8,137.23 2925.2,123.73 2572,116 2174.1,107.29 1693.3,101.3 1543.7,99.536"];
	variants_to_table -> add_vep_fields_to_table	[_draw_="c 7 -#000000 B 4 3863.08 88.58 3835.36 79.9 3792.04 66.35 3761.75 56.87 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3762.81 54.64 3755.4 54.89 3761.35 59.31 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3838.5 73.6 0 13 3 -tsv ",
		label=tsv,
		lp="3838.5,75.5",
		pos="e,3754,54.434 3863.1,88.578 3835.4,79.904 3792,66.35 3761.7,56.871"];
	add_tumor_rna_bam_readcount_to_vcf -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 4 3241.77 268.5 3217.57 261.7 3183.47 252.12 3157.34 244.78 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3158.02 242.42 3150.62 242.89 3156.7 247.14 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3215.5 253.6 0 13 3 -vcf ",
		label=vcf,
		lp="3215.5,255.5",
		pos="e,3149.2,242.48 3241.8,268.5 3217.6,261.7 3183.5,252.12 3157.3,244.78"];
	add_transcript_expression_data_to_vcf -> annotated_vcf	[_draw_="c 7 -#000000 B 10 2983.16 178.7 2956.89 163.39 2897.53 130.9 2843 116 2618.48 54.66 2548.92 114.75 2322 63 2315.58 61.53 2308.83 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2303.64 55.03 2296.22 54.91 2301.94 59.63 ",
		pos="e,2294.8,54.387 2983.2,178.7 2956.9,163.39 2897.5,130.9 2843,116 2618.5,54.662 2548.9,114.75 2322,63 2315.6,61.535 2308.8,59.443 \
2302.5,57.225"];
	add_transcript_expression_data_to_vcf -> index	[_draw_="c 7 -#000000 B 4 3068.28 180.93 3176.32 171.73 3377.89 154.57 3462.75 147.34 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3462.8 149.8 3469.56 146.76 3462.38 144.91 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3300.5 163.6 0 13 3 -vcf ",
		label=vcf,
		lp="3300.5,165.5",
		pos="e,3471.1,146.63 3068.3,180.93 3176.3,171.73 3377.9,154.57 3462.7,147.34"];
	add_vep_fields_to_table -> annotated_tsv;
	add_gene_expression_data_to_vcf -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 4 3094.9 223.5 3076.01 216.85 3049.58 207.53 3028.94 200.26 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3029.9 198 3022.48 197.98 3028.27 202.62 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3074.5 208.6 0 13 3 -vcf ",
		label=vcf,
		lp="3074.5,210.5",
		pos="e,3021.1,197.48 3094.9,223.5 3076,216.85 3049.6,207.53 3028.9,200.26"];
	pvacseq -> combined_ranked_epitopes	[_draw_="c 7 -#000000 B 4 1521.11 88.58 1545.62 80.01 1583.75 66.7 1610.83 57.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1611.63 59.55 1617.43 54.93 1610.01 54.93 ",
		pos="e,1618.9,54.434 1521.1,88.578 1545.6,80.015 1583.8,66.695 1610.8,57.236"];
	pvacseq -> mhc_ii_ranked_epitopes	[_draw_="c 7 -#000000 B 7 1535.89 92 1580.17 86.09 1654.58 75.45 1718 63 1727.81 61.07 1738.32 58.72 1748.17 56.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1748.55 58.81 1754.78 54.79 1747.4 54.05 ",
		pos="e,1756.2,54.438 1535.9,92.004 1580.2,86.087 1654.6,75.45 1718,63 1727.8,61.074 1738.3,58.72 1748.2,56.385"];
	pvacseq -> mhc_i_all_epitopes	[_draw_="c 7 -#000000 B 7 1535.85 95.69 1602.07 92.93 1740.83 84.85 1856 63 1864.4 61.41 1873.34 59.14 1881.64 56.78 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1882.22 59.17 1888.24 54.84 1880.83 54.46 ",
		pos="e,1889.7,54.413 1535.8,95.688 1602.1,92.926 1740.8,84.85 1856,63 1864.4,61.406 1873.3,59.14 1881.6,56.781"];
	pvacseq -> mhc_ii_filtered_epitopes	[_draw_="c 7 -#000000 B 7 1535.9 96.54 1617.09 95.07 1810.31 88.9 1970 63 1980.6 61.28 1991.96 58.87 2002.46 56.4 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2002.95 58.8 2009.18 54.78 2001.8 54.04 ",
		pos="e,2010.7,54.425 1535.9,96.541 1617.1,95.071 1810.3,88.9 1970,63 1980.6,61.28 1992,58.869 2002.5,56.403"];
	pvacseq -> mhc_ii_all_epitopes	[_draw_="c 7 -#000000 B 7 1535.71 96.06 1652.43 93.04 1999.68 82.6 2111 63 2119.73 61.46 2129.01 59.17 2137.59 56.76 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2138.08 59.17 2144.12 54.87 2136.71 54.47 ",
		pos="e,2145.6,54.443 1535.7,96.061 1652.4,93.039 1999.7,82.603 2111,63 2119.7,61.463 2129,59.172 2137.6,56.765"];
	pvacseq -> combined_all_epitopes	[_draw_="c 7 -#000000 B 7 1458.08 95.18 1392.07 91.67 1254.1 82.54 1139 63 1128.93 61.29 1118.15 58.91 1108.18 56.47 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1108.88 54.12 1101.5 54.79 1107.69 58.87 ",
		pos="e,1100,54.416 1458.1,95.179 1392.1,91.673 1254.1,82.536 1139,63 1128.9,61.29 1118.2,58.908 1108.2,56.467"];
	pvacseq -> mhc_i_ranked_epitopes	[_draw_="c 7 -#000000 B 7 1458.15 92.12 1413.51 86.27 1338.17 75.66 1274 63 1264.42 61.11 1254.16 58.79 1244.54 56.48 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1245.13 54.1 1237.75 54.82 1243.97 58.86 ",
		pos="e,1236.3,54.461 1458.1,92.119 1413.5,86.27 1338.2,75.658 1274,63 1264.4,61.109 1254.2,58.789 1244.5,56.478"];
	pvacseq -> combined_filtered_epitopes	[_draw_="c 7 -#000000 B 4 1472.73 88.58 1447.94 79.98 1409.32 66.58 1382.03 57.11 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1383.16 54.91 1375.74 54.93 1381.55 59.54 ",
		pos="e,1374.3,54.434 1472.7,88.578 1447.9,79.978 1409.3,66.58 1382,57.114"];
	pvacseq -> mhc_i_filtered_epitopes	[_draw_="c 7 -#000000 B 4 1497 88.58 1497 81.52 1497 71.24 1497 62.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1499.45 62.78 1497 55.78 1494.55 62.78 ",
		pos="e,1497,54.265 1497,88.578 1497,81.523 1497,71.24 1497,62.547"];
	default1	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 3128.5 313.5 3128.5 332.5 3175.5 332.5 3175.5 313.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3152 320.5 0 31 5 -\"RNA\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"RNA\"",
		pos="3152,323",
		rects="3128.5,313.5,3175.5,332.5",
		width=0.65278];
	default1 -> add_tumor_rna_bam_readcount_to_vcf	[_draw_="c 7 -#000000 B 7 3150.92 313.6 3150.69 307.86 3151.46 300.5 3156 296 3158.27 293.75 3161.72 291.79 3166.04 290.1 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3166.73 292.45 3172.62 287.95 3165.21 287.79 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3176.5 298.6 0 41 9 -data_type ",
		label=data_type,
		lp="3176.5,300.5",
		pos="e,3174.1,287.48 3150.9,313.6 3150.7,307.86 3151.5,300.5 3156,296 3158.3,293.75 3161.7,291.79 3166,290.1"];
	default2	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 2918 223.5 2918 242.5 2990 242.5 2990 223.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2954 230.5 0 56 12 -\"transcript\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"transcript\"",
		pos="2954,233",
		rects="2918,223.5,2990,242.5",
		width=1];
	default2 -> add_transcript_expression_data_to_vcf	[_draw_="c 7 -#000000 B 7 2950.79 223.56 2949.28 218.09 2948.5 211.06 2952 206 2952.85 204.77 2953.8 203.63 2954.83 202.58 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2956.3 204.53 2960.32 198.3 2953.29 200.67 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2972.5 208.6 0 41 9 -data_type ",
		label=data_type,
		lp="2972.5,210.5",
		pos="e,2961.5,197.38 2950.8,223.56 2949.3,218.09 2948.5,211.06 2952,206 2952.8,204.77 2953.8,203.63 2954.8,202.58"];
	default3	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 3086 268.5 3086 287.5 3136 287.5 3136 268.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3111 275.5 0 34 6 -\"gene\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"gene\"",
		pos="3111,278",
		rects="3086,268.5,3136,287.5",
		width=0.69444];
	default3 -> add_gene_expression_data_to_vcf	[_draw_="c 7 -#000000 B 7 3102.79 268.84 3098.68 263.74 3095.13 257.01 3098 251 3098.45 250.05 3098.99 249.13 3099.59 248.25 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3101.16 250.16 3104.13 243.36 3097.57 246.83 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3118.5 253.6 0 41 9 -data_type ",
		label=data_type,
		lp="3118.5,255.5",
		pos="e,3105.2,242.25 3102.8,268.84 3098.7,263.74 3095.1,257.01 3098,251 3098.5,250.05 3099,249.13 3099.6,248.25"];
}