anndata==0.9.2
arrow==1.3.0
asttokens==2.4.1
binaryornot==0.4.4
Bottleneck==1.3.5
Brotli==1.0.9
cached-property==1.5.2
certifi==2024.2.2
chardet==5.2.0
charset-normalizer==3.3.2
colorama==0.4.6
comm==0.2.2
contourpy==1.2.0
cookiecutter==2.6.0
cycler==0.12.1
debugpy==1.8.1
decorator==5.1.1
dunamai==1.19.0
exceptiongroup==1.2.0
executing==2.0.1
fonttools==4.25.0
get-annotations==0.1.2
get_version==3.5.4
h5py==3.9.0
idna==3.6
igraph==0.11.3
importlib-metadata==7.0.1
importlib-resources==6.1.1
ipykernel==6.29.3
ipython==8.24.0
jedi==0.19.1
joblib==1.3.2
jupyter_client==8.6.1
jupyter_core==5.7.2
kiwisolver==1.4.4
# legacy-api-wrap==0.0.0
leidenalg==0.10.2
llvmlite==0.40.1
markdown-it-py==3.0.0
matplotlib==3.8.0
matplotlib-inline==0.1.7
mdurl==0.1.2
munkres==1.1.4
natsort==8.4.0
nest_asyncio==1.6.0
networkx==3.1
numba==0.57.1
numexpr==2.8.7
numpy==1.24.3
packaging==23.2
pandas==2.1.4
parso==0.8.4
patsy==0.5.6
pexpect==4.9.0
pickleshare==0.7.5
pillow==10.2.0
pip==23.3.2
platformdirs==4.1.0
plotly==5.22.0
pooch==1.8.0
prompt-toolkit==3.0.42
psutil==5.9.8
ptyprocess==0.7.0
pure-eval==0.2.2
py-cpuinfo==9.0.0
Pygments==2.18.0
pynndescent==0.5.11
pyparsing==3.0.9
PySocks==1.7.1
python-dateutil==2.8.2
python-slugify==8.0.4
pytz==2023.3.post1
pyzmq==26.0.3
requests==2.31.0
scanpy==1.9.6
scikit-learn==1.3.0
scipy==1.11.4
seaborn==0.13.1
session-info==1.0.0
setuptools==69.0.3
sinfo==0.3.1
six==1.16.0
stack-data==0.6.2
statsmodels==0.14.0
stdlib-list==0.8.0
tables==3.8.0
tenacity==8.2.2
text-unidecode==1.3
texttable==1.7.0
threadpoolctl==3.2.0
tornado==6.4
tqdm==4.66.1
traitlets==5.14.3
types-python-dateutil==2.9.0.20240316
typing_extensions==4.9.0
tzdata==2023.4
umap-learn==0.5.3
unicodedata2==15.0.0
urllib3==2.1.0
wcwidth==0.2.13
wheel==0.42.0
zenodo_get==1.6.0
zipp==3.17.0
git+https://github.com/JCVenterInstitute/NSForest.git
git+https://github.com/BeverlyPeng/frmatch.git
