digraph workflow {
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	edge [arrowsize=0.7,
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		fontcolor=black,
		fontname=Helvetica,
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	subgraph cluster_inputs {
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			lheight=0.15,
			lp="58,260.5",
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		downsample_strategy	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1039.5 223.5 1039.5 242.5 1164.5 242.5 1164.5 223.5 ",
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			fillcolor="#94DDF4",
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		intervals	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 798.5 223.5 798.5 242.5 857.5 242.5 857.5 223.5 ",
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			fillcolor="#94DDF4",
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			rects="798.5,223.5,857.5,242.5",
			width=0.81944];
		reference	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 861.5 223.5 861.5 242.5 924.5 242.5 924.5 223.5 ",
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			fillcolor="#94DDF4",
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			width=0.875];
		crams_to_downsample	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1321.5 223.5 1321.5 242.5 1450.5 242.5 1450.5 223.5 ",
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			fillcolor="#94DDF4",
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			pos="1386,233",
			rects="1321.5,223.5,1450.5,242.5",
			width=1.7917];
		downsample_seed	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 928.5 223.5 928.5 242.5 1035.5 242.5 1035.5 223.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 982 230.5 0 91 15 -downsample_seed ",
			fillcolor="#94DDF4",
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			rects="928.5,223.5,1035.5,242.5",
			width=1.4861];
		emit_reference_confidence	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1168.5 223.5 1168.5 242.5 1317.5 242.5 1317.5 223.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1243 230.5 0 133 25 -emit_reference_confidence ",
			fillcolor="#94DDF4",
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			pos="1243,233",
			rects="1168.5,223.5,1317.5,242.5",
			width=2.0694];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 1104 8 1104 63 1222 63 1222 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 1158 15 0 92 16 -Workflow Outputs ",
			bb="1104,8,1222,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="1158,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		result_directories	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1112.5 35.5 1112.5 54.5 1213.5 54.5 1213.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1163 42.5 0 85 18 -result_directories ",
			fillcolor="#94DDF4",
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			pos="1163,45",
			rects="1112.5,35.5,1213.5,54.5",
			width=1.4028];
	}
	downsample_and_recall	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 736.5 170.5 736.5 189.5 919.5 189.5 919.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 828 177.5 0 167 30 -Downsample and HaplotypeCaller ",
		fillcolor="#F3CEA1",
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		label="Downsample and HaplotypeCaller",
		pos="828,180",
		rects="736.5,170.5,919.5,189.5",
		width=2.5417];
	downsample_strategy -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 1084.38 223.62 1066.75 215.63 1038.62 203.95 1013 198 985.55 191.62 955.29 187.62 927.33 185.11 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 927.81 182.69 920.63 184.54 927.4 187.57 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1088.5 200.6 0 91 19 -downsample_strategy ",
		label=downsample_strategy,
		lp="1088.5,202.5",
		pos="e,919.12,184.41 1084.4,223.62 1066.7,215.63 1038.6,203.95 1013,198 985.55,191.62 955.29,187.62 927.33,185.11"];
	qc_minimum_mapping_quality -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 115.87 223.56 132.37 215.28 159.2 203.17 184 198 235.62 187.24 560.6 183.11 728.23 181.68 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 728.09 184.13 735.07 181.62 728.05 179.23 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 245.5 200.6 0 123 26 -qc_minimum_mapping_quality ",
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	variant_index_type -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 261.9 223.63 281.49 215.4 313.23 203.32 342 198 413.42 184.79 608.35 181.66 728.52 181.02 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 728.18 183.48 735.17 180.99 728.16 178.58 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 380 200.6 0 76 18 -variant_index_type ",
		label=variant_index_type,
		lp="380,202.5",
		pos="e,736.68,180.98 261.9,223.63 281.49,215.4 313.23,203.32 342,198 413.42,184.79 608.35,181.66 728.52,181.02"];
	max_alternate_alleles -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 380.79 223.5 396.92 215.3 422.93 203.35 447 198 498.52 186.54 633.65 182.76 728.26 181.54 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 728.23 183.99 735.2 181.46 728.17 179.09 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 492 200.6 0 90 21 -max_alternate_alleles ",
		label=max_alternate_alleles,
		lp="492,202.5",
		pos="e,736.72,181.44 380.79,223.5 396.92,215.3 422.93,203.35 447,198 498.52,186.54 633.65,182.76 728.26,181.54"];
	qc_minimum_base_quality -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 515.12 223.54 524.55 215.36 540.11 203.44 556 198 587.02 187.38 664.15 183.28 728.39 181.75 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 728.1 184.21 735.04 181.6 727.99 179.31 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 609.5 200.6 0 107 23 -qc_minimum_base_quality ",
		label=qc_minimum_base_quality,
		lp="609.5,202.5",
		pos="e,736.56,181.57 515.12,223.54 524.55,215.36 540.11,203.44 556,198 587.02,187.38 664.15,183.28 728.39,181.75"];
	variant_index_parameter -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 656.45 223.75 659.29 215.75 664.8 203.95 674 198 683.85 191.63 704.86 187.62 728.29 185.11 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 728.43 187.56 735.15 184.43 727.95 182.68 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 724.5 200.6 0 101 23 -variant_index_parameter ",
		label=variant_index_parameter,
		lp="724.5,202.5",
		pos="e,736.66,184.29 656.45,223.75 659.29,215.75 664.8,203.95 674,198 683.85,191.63 704.86,187.62 728.29,185.11"];
	read_filter -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 765.07 223.68 769.17 216.07 776.14 204.97 785 198 787.35 196.15 789.92 194.49 792.6 192.98 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 793.34 195.35 798.53 190.05 791.17 190.96 ",
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		lp="806,202.5",
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	intervals -> downsample_and_recall	[_draw_="c 7 -#000000 B 4 828 223.58 828 216.52 828 206.24 828 197.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 830.45 197.78 828 190.78 825.55 197.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 846 200.6 0 36 9 -intervals ",
		label=intervals,
		lp="846,202.5",
		pos="e,828,189.26 828,223.58 828,216.52 828,206.24 828,197.55"];
	reference -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 887.65 223.53 882.57 216.03 874.33 205.19 865 198 862.82 196.32 860.44 194.75 857.98 193.31 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 859.13 191.15 851.79 190.05 856.84 195.48 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 893 200.6 0 40 9 -reference ",
		label=reference,
		lp="893,202.5",
		pos="e,850.45,189.35 887.65,223.53 882.57,216.03 874.33,205.19 865,198 862.82,196.32 860.44,194.75 857.98,193.31"];
	crams_to_downsample -> downsample_and_recall	[_draw_="c 7 -#000000 B 10 1352.17 223.55 1323.17 216.3 1286.05 207.02 1286 207 1279.6 204.1 1279.67 200.22 1273 198 1241.25 187.41 1048.88 \
183.37 927.69 181.86 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 927.99 179.42 920.96 181.78 927.93 184.32 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1333 200.6 0 94 19 -crams_to_downsample ",
		label=crams_to_downsample,
		lp="1333,202.5",
		pos="e,919.45,181.76 1352.2,223.55 1323.2,216.3 1286,207.02 1286,207 1279.6,204.1 1279.7,200.22 1273,198 1241.3,187.41 1048.9,183.37 \
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	gather_results	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1120 80.5 1120 99.5 1206 99.5 1206 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1163 87.5 0 70 14 -gather_results ",
		height=0.27778,
		label=gather_results,
		pos="1163,90",
		rects="1120,80.5,1206,99.5",
		width=1.1944];
	crams_to_downsample -> gather_results	[_draw_="c 7 -#000000 B 7 1385.68 223.58 1384.99 216.12 1382.93 205.29 1377 198 1333.63 144.7 1256.95 115.6 1208.12 101.69 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1208.8 99.33 1201.4 99.83 1207.49 104.05 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1349.5 155.6 0 25 6 -outdir ",
		label=outdir,
		lp="1349.5,157.5",
		pos="e,1199.9,99.422 1385.7,223.58 1385,216.12 1382.9,205.29 1377,198 1333.6,144.7 1257,115.6 1208.1,101.69"];
	downsample_seed -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 967.9 223.54 954.47 215.83 933.48 204.66 914 198 906.52 195.44 898.53 193.22 890.55 191.31 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 891.11 188.92 883.74 189.76 890.02 193.7 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 973.5 200.6 0 77 15 -downsample_seed ",
		label=downsample_seed,
		lp="973.5,202.5",
		pos="e,882.26,189.42 967.9,223.54 954.47,215.83 933.48,204.66 914,198 906.52,195.44 898.53,193.22 890.55,191.31"];
	emit_reference_confidence -> downsample_and_recall	[_draw_="c 7 -#000000 B 7 1216.36 223.57 1184.72 213.56 1136.04 198.19 1135 198 1096.63 191.01 1002.05 186.46 927.92 183.85 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 928.04 181.4 920.96 183.6 927.87 186.29 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1217 200.6 0 112 25 -emit_reference_confidence ",
		label=emit_reference_confidence,
		lp="1217,202.5",
		pos="e,919.44,183.55 1216.4,223.57 1184.7,213.56 1136,198.19 1135,198 1096.6,191.01 1002,186.46 927.92,183.85"];
	join_results	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 851.5 125.5 851.5 144.5 924.5 144.5 924.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 888 132.5 0 57 12 -join_results ",
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		label=join_results,
		pos="888,135",
		rects="851.5,125.5,924.5,144.5",
		width=1.0139];
	join_results -> gather_results	[_draw_="c 7 -#000000 B 4 924.23 128.33 972.37 120.81 1057.67 107.47 1112.21 98.94 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1112.33 101.4 1118.86 97.9 1111.57 96.56 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1059 110.6 0 18 5 -files ",
		label=files,
		lp="1059,112.5",
		pos="e,1120.4,97.667 924.23,128.33 972.37,120.81 1057.7,107.47 1112.2,98.941"];
	downsample_and_recall -> join_results	[_draw_="c 7 -#000000 B 7 827.14 170.8 827.01 165.15 827.81 157.83 832 153 835.28 149.21 839.38 146.25 843.86 143.95 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 844.78 146.21 850.27 141.23 842.87 141.7 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 857.5 155.6 0 51 11 -wgs_metrics ",
		label=wgs_metrics,
		lp="857.5,157.5",
		pos="e,851.67,140.64 827.14,170.8 827.01,165.15 827.81,157.83 832,153 835.28,149.21 839.38,146.25 843.86,143.95"];
	downsample_and_recall -> join_results	[_draw_="c 7 -#000000 B 7 867.84 170.53 872.34 168.32 876.54 165.52 880 162 882.61 159.35 884.37 155.87 885.55 152.32 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 887.88 153.12 887.07 145.75 883.11 152.01 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 896 155.6 0 22 5 -gvcfs ",
		label=gvcfs,
		lp="896,157.5",
		pos="e,887.42,144.27 867.84,170.53 872.34,168.32 876.54,165.52 880,162 882.61,159.35 884.37,155.87 885.55,152.32"];
	gather_results -> result_directories	[_draw_="c 7 -#000000 B 4 1163 80.71 1163 75.59 1163 68.85 1163 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1165.45 62.78 1163 55.78 1160.55 62.78 ",
		pos="e,1163,54.265 1163,80.709 1163,75.593 1163,68.848 1163,62.666"];
}
