digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 548 748 548 748 0 ",
		bb="0,0,748,548",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
	];
	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 485 8 540 740 540 740 485 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 528 0 84 15 -Workflow Inputs ",
			bb="8,485,740,540",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,530.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		reference	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16.5 493.5 16.5 512.5 79.5 512.5 79.5 493.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 48 500.5 0 47 9 -reference ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=reference,
			pos="48,503",
			rects="16.5,493.5,79.5,512.5",
			width=0.875];
		tumor_bam	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 249.5 493.5 249.5 512.5 322.5 512.5 322.5 493.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 286 500.5 0 57 9 -tumor_bam ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=tumor_bam,
			pos="286,503",
			rects="249.5,493.5,322.5,512.5",
			width=1.0139];
		interval_list	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 84 493.5 84 512.5 158 512.5 158 493.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 121 500.5 0 58 13 -interval_list ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=interval_list,
			pos="121,503",
			rects="84,493.5,158,512.5",
			width=1.0278];
		normal_sample_name	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 326.5 493.5 326.5 512.5 451.5 512.5 451.5 493.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 389 500.5 0 109 18 -normal_sample_name ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=normal_sample_name,
			pos="389,503",
			rects="326.5,493.5,451.5,512.5",
			width=1.7361];
		scatter_count	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 162.5 493.5 162.5 512.5 245.5 512.5 245.5 493.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 204 500.5 0 67 13 -scatter_count ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=scatter_count,
			pos="204,503",
			rects="162.5,493.5,245.5,512.5",
			width=1.1528];
		tumor_sample_name	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 456 493.5 456 512.5 576 512.5 576 493.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 516 500.5 0 104 17 -tumor_sample_name ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=tumor_sample_name,
			pos="516,503",
			rects="456,493.5,576,512.5",
			width=1.6667];
		insert_size	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 580.5 493.5 580.5 512.5 649.5 512.5 649.5 493.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 615 500.5 0 53 11 -insert_size ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=insert_size,
			pos="615,503",
			rects="580.5,493.5,649.5,512.5",
			width=0.95833];
		normal_bam	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 654 493.5 654 512.5 732 512.5 732 493.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 693 500.5 0 62 10 -normal_bam ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=normal_bam,
			pos="693,503",
			rects="654,493.5,732,512.5",
			width=1.0833];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 50 8 50 63 225 63 225 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 104 15 0 92 16 -Workflow Outputs ",
			bb="50,8,225,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="104,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		filtered_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 58.5 35.5 58.5 54.5 129.5 54.5 129.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 94 42.5 0 55 12 -filtered_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=filtered_vcf,
			pos="94,45",
			rects="58.5,35.5,129.5,54.5",
			width=0.98611];
		unfiltered_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 133.5 35.5 133.5 54.5 216.5 54.5 216.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 175 42.5 0 67 14 -unfiltered_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=unfiltered_vcf,
			pos="175,45",
			rects="133.5,35.5,216.5,54.5",
			width=1.1528];
	}
	pindel_cat	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 295 395.5 295 414.5 395 414.5 395 395.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 345 402.5 0 84 17 -Per-region pindel ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="Per-region pindel",
		pos="345,405",
		rects="295,395.5,395,414.5",
		width=1.3889];
	reference -> pindel_cat	[_draw_="c 7 -#000000 B 10 64.68 493.52 71.29 489.38 78.4 483.8 83 477 92.48 462.98 79.42 451.32 92 440 119.84 414.94 221.2 408.15 286.87 \
406.43 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 286.64 408.89 293.58 406.27 286.52 403.99 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 112 448.1 0 40 9 -reference ",
		label=reference,
		lp="112,450",
		pos="e,295.09,406.24 64.677,493.52 71.29,489.38 78.399,483.8 83,477 92.48,462.98 79.421,451.32 92,440 119.84,414.94 221.2,408.15 286.87,\
406.43"];
	filter	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 68.5 80.5 68.5 99.5 169.5 99.5 169.5 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 119 87.5 0 85 18 -fp_filter workflow ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="fp_filter workflow",
		pos="119,90",
		rects="68.5,80.5,169.5,99.5",
		width=1.4028];
	reference -> filter	[_draw_="c 7 -#000000 B 10 50.63 493.79 53.59 483.8 58 466.34 58 451 58 451 58 451 58 134 58 119.7 69.33 109.74 82.23 103.04 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 83.24 105.27 88.56 100.09 81.18 100.82 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 78 290.6 0 40 9 -reference ",
		label=reference,
		lp="78,292.5",
		pos="e,89.929,99.454 50.627,493.79 53.59,483.8 58,466.34 58,451 58,451 58,451 58,134 58,119.7 69.333,109.74 82.229,103.04"];
	somaticfilter	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 126.5 305.5 126.5 324.5 255.5 324.5 255.5 305.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 191 312.5 0 113 24 -pindel somatic filter v1 ",
		height=0.27778,
		label="pindel somatic filter v1",
		pos="191,315",
		rects="126.5,305.5,255.5,324.5",
		width=1.7917];
	reference -> somaticfilter	[_draw_="c 7 -#000000 B 7 52.54 493.72 59.31 481.58 72.68 458.41 86 440 116.25 398.19 156.88 352.81 177.62 330.32 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 179.16 332.26 182.12 325.46 175.56 328.93 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 141 403.1 0 40 9 -reference ",
		label=reference,
		lp="141,405",
		pos="e,183.14,324.35 52.537,493.72 59.305,481.58 72.681,458.41 86,440 116.25,398.19 156.88,352.81 177.62,330.32"];
	tumor_bam -> pindel_cat	[_draw_="c 7 -#000000 B 7 288.85 493.55 293.22 481.2 302.32 457.76 314 440 318.64 432.94 324.74 425.91 330.3 420.09 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 331.77 422.08 334.96 415.39 328.29 418.64 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 337 448.1 0 46 9 -tumor_bam ",
		label=tumor_bam,
		lp="337,450",
		pos="e,336.02,414.31 288.85,493.55 293.22,481.2 302.32,457.76 314,440 318.64,432.94 324.74,425.91 330.3,420.09"];
	tumor_bam -> filter	[_draw_="c 7 -#000000 B 16 286.97 493.93 288.06 480.77 288.13 454.7 274 440 263.24 428.81 253.68 439.34 240 432 174.35 396.78 119 390.5 119 \
316 119 316 119 316 119 134 119 125.31 119 115.63 119 107.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 121.45 107.76 119 100.76 116.55 107.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 128.5 290.6 0 19 3 -bam ",
		label=bam,
		lp="128.5,292.5",
		pos="e,119,99.243 286.97,493.93 288.06,480.77 288.13,454.7 274,440 263.24,428.81 253.68,439.34 240,432 174.35,396.78 119,390.5 119,316 \
119,316 119,316 119,134 119,125.31 119,115.63 119,107.65"];
	split_interval_list_to_bed	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 134.5 440.5 134.5 459.5 273.5 459.5 273.5 440.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 204 447.5 0 123 26 -split_interval_list_to_bed ",
		height=0.27778,
		label=split_interval_list_to_bed,
		pos="204,450",
		rects="134.5,440.5,273.5,459.5",
		width=1.9306];
	interval_list -> split_interval_list_to_bed	[_draw_="c 7 -#000000 B 7 127.71 493.68 134.23 486.07 144.77 474.97 156 468 159.17 466.03 162.6 464.25 166.12 462.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 166.96 464.95 172.49 460 165.09 460.42 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 179.5 470.6 0 47 13 -interval_list ",
		label=interval_list,
		lp="179.5,472.5",
		pos="e,173.89,459.42 127.71,493.68 134.23,486.07 144.77,474.97 156,468 159.17,466.03 162.6,464.25 166.12,462.65"];
	normal_sample_name -> pindel_cat	[_draw_="c 7 -#000000 B 4 385.25 493.82 377.98 477.95 361.86 442.78 352.37 422.08 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 354.64 421.16 349.5 415.81 350.19 423.2 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 414 448.1 0 90 18 -normal_sample_name ",
		label=normal_sample_name,
		lp="414,450",
		pos="e,348.87,414.44 385.25,493.82 377.98,477.95 361.86,442.78 352.37,422.08"];
	scatter_count -> split_interval_list_to_bed	[_draw_="c 7 -#000000 B 4 204 493.58 204 486.52 204 476.24 204 467.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 206.45 467.78 204 460.78 201.55 467.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 232 470.6 0 56 13 -scatter_count ",
		label=scatter_count,
		lp="232,472.5",
		pos="e,204,459.26 204,493.58 204,486.52 204,476.24 204,467.55"];
	tumor_sample_name -> pindel_cat	[_draw_="c 7 -#000000 B 7 510.85 493.85 502.05 480.59 482.83 454.37 460 440 442.81 429.18 422.02 421.67 402.87 416.51 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 403.63 414.18 396.25 414.82 402.42 418.93 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 525.5 448.1 0 85 17 -tumor_sample_name ",
		label=tumor_sample_name,
		lp="525.5,450",
		pos="e,394.78,414.45 510.85,493.85 502.05,480.59 482.83,454.37 460,440 442.81,429.18 422.02,421.67 402.87,416.51"];
	insert_size -> pindel_cat	[_draw_="c 7 -#000000 B 7 611.35 493.51 604.97 479.76 590.36 452.85 569 440 541.81 423.65 459.94 414.4 403.1 409.8 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 403.59 407.38 396.42 409.27 403.2 412.27 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 612 448.1 0 44 11 -insert_size ",
		label=insert_size,
		lp="612,450",
		pos="e,394.91,409.16 611.35,493.51 604.97,479.76 590.36,452.85 569,440 541.81,423.65 459.94,414.4 403.1,409.8"];
	normal_bam -> pindel_cat	[_draw_="c 7 -#000000 B 7 687.78 493.55 678.82 479.84 659.13 453.01 635 440 596.17 419.07 476.1 410.88 403.2 407.79 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 403.59 405.35 396.5 407.51 403.39 410.25 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 685.5 448.1 0 51 10 -normal_bam ",
		label=normal_bam,
		lp="685.5,450",
		pos="e,394.99,407.45 687.78,493.55 678.82,479.84 659.13,453.01 635,440 596.17,419.07 476.1,410.88 403.2,407.79"];
	cat_all	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 194.5 350.5 194.5 369.5 243.5 369.5 243.5 350.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 219 357.5 0 33 7 -cat_all ",
		height=0.27778,
		label=cat_all,
		pos="219,360",
		rects="194.5,350.5,243.5,369.5",
		width=0.68056];
	pindel_cat -> cat_all	[_draw_="c 7 -#000000 B 4 320.11 395.5 300.39 388.78 272.7 379.33 251.29 372.02 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 252.26 369.76 244.85 369.82 250.68 374.4 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 332 380.6 0 78 18 -region_pindel_outs ",
		label=region_pindel_outs,
		lp="332,382.5",
		pos="e,243.41,369.33 320.11,395.5 300.39,388.78 272.7,379.33 251.29,372.02"];
	index	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 160 215.5 160 234.5 222 234.5 222 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 191 222.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="191,225",
		rects="160,215.5,222,234.5",
		width=0.86111];
	remove_end_tags	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 126.5 170.5 126.5 189.5 255.5 189.5 255.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 191 177.5 0 113 20 -remove END INFO tags ",
		height=0.27778,
		label="remove END INFO tags",
		pos="191,180",
		rects="126.5,170.5,255.5,189.5",
		width=1.7917];
	index -> remove_end_tags	[_draw_="c 7 -#000000 B 4 191 215.71 191 210.59 191 203.85 191 197.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 193.45 197.78 191 190.78 188.55 197.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 197.5 200.6 0 13 3 -vcf ",
		label=vcf,
		lp="197.5,202.5",
		pos="e,191,189.27 191,215.71 191,210.59 191,203.85 191,197.67"];
	filter -> filtered_vcf	[_draw_="c 7 -#000000 B 4 114.18 80.71 111 75.24 106.73 67.9 102.94 61.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 105.2 60.39 99.57 55.57 100.97 62.86 ",
		pos="e,98.805,54.265 114.18,80.709 111,75.236 106.73,67.899 102.94,61.381"];
	filter -> unfiltered_vcf	[_draw_="c 7 -#000000 B 4 130.06 80.5 137.81 74.56 148.33 66.48 157.24 59.64 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 158.7 61.61 162.76 55.4 155.71 57.72 ",
		pos="e,163.96,54.478 130.06,80.505 137.81,74.556 148.33,66.481 157.24,59.637"];
	reindex	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 143 125.5 143 144.5 205 144.5 205 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 174 132.5 0 46 9 -vcf index ",
		height=0.27778,
		label="vcf index",
		pos="174,135",
		rects="143,125.5,205,144.5",
		width=0.86111];
	reindex -> filter	[_draw_="c 7 -#000000 B 4 163.13 125.5 155.53 119.56 145.2 111.48 136.44 104.64 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 138.06 102.79 131.04 100.41 135.04 106.65 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 157.5 110.6 0 13 3 -vcf ",
		label=vcf,
		lp="157.5,112.5",
		pos="e,129.84,99.478 163.13,125.5 155.53,119.56 145.2,111.48 136.44,104.64"];
	bgzip	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 158.5 260.5 158.5 279.5 223.5 279.5 223.5 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 191 267.5 0 49 9 -bgzip VCF ",
		height=0.27778,
		label="bgzip VCF",
		pos="191,270",
		rects="158.5,260.5,223.5,279.5",
		width=0.90278];
	somaticfilter -> bgzip	[_draw_="c 7 -#000000 B 4 191 305.71 191 300.59 191 293.85 191 287.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 193.45 287.78 191 280.78 188.55 287.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 197.5 290.6 0 13 4 -file ",
		label=file,
		lp="197.5,292.5",
		pos="e,191,279.27 191,305.71 191,300.59 191,293.85 191,287.67"];
	bgzip -> index	[_draw_="c 7 -#000000 B 4 191 260.71 191 255.59 191 248.85 191 242.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 193.45 242.78 191 235.78 188.55 242.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 197.5 245.6 0 13 3 -vcf ",
		label=vcf,
		lp="197.5,247.5",
		pos="e,191,234.27 191,260.71 191,255.59 191,248.85 191,242.67"];
	cat_all -> somaticfilter	[_draw_="c 7 -#000000 B 4 213.6 350.71 210.04 345.24 205.26 337.9 201.02 331.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 203.08 330.06 197.21 325.53 198.97 332.74 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 256 335.6 0 98 21 -pindel_output_summary ",
		label=pindel_output_summary,
		lp="256,337.5",
		pos="e,196.38,324.27 213.6,350.71 210.04,345.24 205.26,337.9 201.02,331.38"];
	split_interval_list_to_bed -> pindel_cat	[_draw_="c 7 -#000000 B 7 221.58 440.6 233.82 435.01 250.63 427.83 266 423 273.83 420.54 282.21 418.32 290.47 416.35 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 290.92 418.76 297.2 414.81 289.83 413.98 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 287.5 425.6 0 43 11 -region_file ",
		label=region_file,
		lp="287.5,427.5",
		pos="e,298.67,414.47 221.58,440.6 233.82,435.01 250.63,427.83 266,423 273.83,420.54 282.21,418.32 290.47,416.35"];
	remove_end_tags -> reindex	[_draw_="c 7 -#000000 B 4 187.72 170.71 185.61 165.36 182.78 158.22 180.25 151.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 182.68 151.28 177.82 145.67 178.12 153.08 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 190.5 155.6 0 13 3 -vcf ",
		label=vcf,
		lp="190.5,157.5",
		pos="e,177.27,144.27 187.72,170.71 185.61,165.36 182.78,158.22 180.25,151.81"];
}