digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 323 790 323 790 0 ",
		bb="0,0,790,323",
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	edge [arrowsize=0.7,
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		fontcolor=black,
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			lheight=0.15,
			lp="58,305.5",
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			width=1.0278];
		target_intervals	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 591 268.5 591 287.5 685 287.5 685 268.5 ",
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			rects="591,268.5,685,287.5",
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		sample_name	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 409 268.5 409 287.5 495 287.5 495 268.5 ",
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		library_name	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16.5 268.5 16.5 287.5 97.5 287.5 97.5 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 57 275.5 0 65 12 -library_name ",
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			width=1.125];
		read2_fastq	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 102 268.5 102 287.5 176 287.5 176 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 139 275.5 0 58 11 -read2_fastq ",
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			label=read2_fastq,
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			rects="102,268.5,176,287.5",
			width=1.0278];
		platform	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 180.5 268.5 180.5 287.5 239.5 287.5 239.5 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 210 275.5 0 43 8 -platform ",
			fillcolor="#94DDF4",
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			pos="210,278",
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			width=0.81944];
		reference	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 689.5 268.5 689.5 287.5 752.5 287.5 752.5 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 721 275.5 0 47 9 -reference ",
			fillcolor="#94DDF4",
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			label=reference,
			pos="721,278",
			rects="689.5,268.5,752.5,287.5",
			width=0.875];
		platform_unit	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 243.5 268.5 243.5 287.5 326.5 287.5 326.5 268.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 285 275.5 0 67 13 -platform_unit ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=platform_unit,
			pos="285,278",
			rects="243.5,268.5,326.5,287.5",
			width=1.1528];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 438 8 438 63 770 63 770 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 492 15 0 92 16 -Workflow Outputs ",
			bb="438,8,770,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="492,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
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		duplex_seq_metrics	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 560 35.5 560 54.5 674 54.5 674 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 617 42.5 0 98 18 -duplex_seq_metrics ",
			fillcolor="#94DDF4",
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			label=duplex_seq_metrics,
			pos="617,45",
			rects="560,35.5,674,54.5",
			width=1.5833];
		aligned_cram	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 678.5 35.5 678.5 54.5 761.5 54.5 761.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 720 42.5 0 67 12 -aligned_cram ",
			fillcolor="#94DDF4",
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			label=aligned_cram,
			pos="720,45",
			rects="678.5,35.5,761.5,54.5",
			width=1.1528];
		adapter_histogram	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 446.5 35.5 446.5 54.5 555.5 54.5 555.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 501 42.5 0 93 17 -adapter_histogram ",
			fillcolor="#94DDF4",
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			label=adapter_histogram,
			pos="501,45",
			rects="446.5,35.5,555.5,54.5",
			width=1.5139];
	}
	fastq_to_bam	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 245.5 215.5 245.5 234.5 324.5 234.5 324.5 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 285 222.5 0 63 12 -fastq to bam ",
		height=0.27778,
		label="fastq to bam",
		pos="285,225",
		rects="245.5,215.5,324.5,234.5",
		width=1.0972];
	read1_fastq -> fastq_to_bam	[_draw_="c 7 -#000000 B 7 363.31 268.52 358.62 260.79 350.72 249.61 341 243 338.12 241.04 335 239.3 331.77 237.76 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 332.85 235.55 325.45 235.09 330.94 240.07 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 374.5 245.6 0 49 11 -read1_fastq ",
		label=read1_fastq,
		lp="374.5,247.5",
		pos="e,324.06,234.5 363.31,268.52 358.62,260.79 350.72,249.61 341,243 338.12,241.04 335,239.3 331.77,237.76"];
	alignment_workflow	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 482.5 170.5 482.5 189.5 669.5 189.5 669.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 576 177.5 0 171 32 -umi molecular alignment workflow ",
		fillcolor="#F3CEA1",
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		label="umi molecular alignment workflow",
		pos="576,180",
		rects="482.5,170.5,669.5,189.5",
		width=2.5972];
	target_intervals -> alignment_workflow	[_draw_="c 7 -#000000 B 10 632.94 268.68 627.82 260.24 619.74 246.78 613 235 607.96 226.2 607.54 223.5 602 215 597.74 208.47 592.6 201.58 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 590.21 194.54 583.94 190.59 586.38 197.59 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 645 223.1 0 64 16 -target_intervals ",
		label=target_intervals,
		lp="645,225",
		pos="e,582.99,189.4 632.94,268.68 627.82,260.24 619.74,246.78 613,235 607.96,226.2 607.54,223.5 602,215 597.74,208.47 592.6,201.58 588.03,\
195.72"];
	sample_name -> alignment_workflow	[_draw_="c 7 -#000000 B 10 458.62 268.58 462.06 263.89 466.14 257.85 469 252 476.6 236.47 468.96 227.41 481 215 491.29 204.39 505.12 197.08 \
519.04 192.05 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 519.45 194.5 525.32 189.96 517.9 189.85 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 510 223.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="510,225",
		pos="e,526.75,189.48 458.62,268.58 462.06,263.89 466.14,257.85 469,252 476.6,236.47 468.96,227.41 481,215 491.29,204.39 505.12,197.08 \
519.04,192.05"];
	sample_name -> fastq_to_bam	[_draw_="c 7 -#000000 B 7 439.32 268.66 424.1 258.66 400.55 243.21 400 243 378.68 234.9 353.77 230.64 332.6 228.41 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 333.1 225.99 325.89 227.77 332.63 230.87 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 441 245.6 0 58 11 -sample_name ",
		label=sample_name,
		lp="441,247.5",
		pos="e,324.39,227.62 439.32,268.66 424.1,258.66 400.55,243.21 400,243 378.68,234.9 353.77,230.64 332.6,228.41"];
	read_structure -> alignment_workflow	[_draw_="c 7 -#000000 B 7 541.5 268.6 539.68 256.32 537.71 232.96 545 215 548.09 207.39 553.7 200.41 559.3 194.78 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 560.7 196.83 564.16 190.26 557.36 193.24 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 575 223.1 0 60 14 -read_structure ",
		label=read_structure,
		lp="575,225",
		pos="e,565.27,189.23 541.5,268.6 539.68,256.32 537.71,232.96 545,215 548.09,207.39 553.7,200.41 559.3,194.78"];
	library_name -> fastq_to_bam	[_draw_="c 7 -#000000 B 7 68.28 268.69 79.87 260.64 98.75 248.81 117 243 156.27 230.5 203.08 226.6 237.3 225.63 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 237.26 228.08 244.2 225.47 237.15 223.18 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 143.5 245.6 0 53 12 -library_name ",
		label=library_name,
		lp="143.5,247.5",
		pos="e,245.71,225.44 68.283,268.69 79.872,260.64 98.746,248.81 117,243 156.27,230.5 203.08,226.6 237.3,225.63"];
	read2_fastq -> fastq_to_bam	[_draw_="c 7 -#000000 B 7 148.17 268.59 157.31 260.69 172.1 249.19 187 243 202.75 236.45 220.94 232.43 237.33 229.95 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 237.63 232.38 244.23 229 236.96 227.53 ",
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		label=read2_fastq,
		lp="211.5,247.5",
		pos="e,245.72,228.79 148.17,268.59 157.31,260.69 172.1,249.19 187,243 202.75,236.45 220.94,232.43 237.33,229.95"];
	platform -> fastq_to_bam	[_draw_="c 7 -#000000 B 7 218.13 268.71 225.66 261.34 237.42 250.57 249 243 251.58 241.31 254.36 239.7 257.18 238.18 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 258.16 240.43 263.31 235.09 255.96 236.05 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 266.5 245.6 0 35 8 -platform ",
		label=platform,
		lp="266.5,247.5",
		pos="e,264.67,234.41 218.13,268.71 225.66,261.34 237.42,250.57 249,243 251.58,241.31 254.36,239.7 257.18,238.18"];
	reference -> alignment_workflow	[_draw_="c 7 -#000000 B 10 713.01 268.73 705.33 260.55 693.64 247.47 685 235 679.22 226.66 681.75 221.54 674 215 661.34 204.32 645.13 196.92 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 630.35 189.51 622.93 189.82 628.92 194.2 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 705 223.1 0 40 9 -reference ",
		label=reference,
		lp="705,225",
		pos="e,621.49,189.37 713.01,268.73 705.33,260.55 693.64,247.47 685,235 679.22,226.66 681.75,221.54 674,215 661.34,204.32 645.13,196.92 \
629.55,191.83"];
	bam_to_cram	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 650 125.5 650 144.5 790 144.5 790 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 720 132.5 0 124 22 -BAM to CRAM conversion ",
		height=0.27778,
		label="BAM to CRAM conversion",
		pos="720,135",
		rects="650,125.5,790,144.5",
		width=1.9444];
	reference -> bam_to_cram	[_draw_="c 7 -#000000 B 7 721.26 268.63 721.51 260.16 721.86 246.67 722 235 722.34 206.19 721.38 172.68 720.67 152.96 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 723.12 152.89 720.41 145.99 718.23 153.07 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 741 200.6 0 40 9 -reference ",
		label=reference,
		lp="741,202.5",
		pos="e,720.35,144.47 721.26,268.63 721.51,260.16 721.86,246.67 722,235 722.34,206.19 721.38,172.68 720.67,152.96"];
	platform_unit -> fastq_to_bam	[_draw_="c 7 -#000000 B 4 285 268.58 285 261.52 285 251.24 285 242.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 287.45 242.78 285 235.78 282.55 242.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 312.5 245.6 0 55 13 -platform_unit ",
		label=platform_unit,
		lp="312.5,247.5",
		pos="e,285,234.26 285,268.58 285,261.52 285,251.24 285,242.55"];
	alignment_workflow -> duplex_seq_metrics	[_draw_="c 7 -#000000 B 4 578.56 170.68 585.24 149.03 603.23 90.67 612.02 62.14 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 614.27 63.17 613.99 55.76 609.59 61.73 ",
		pos="e,614.44,54.317 578.56,170.68 585.24,149.03 603.23,90.667 612.02,62.139"];
	alignment_workflow -> adapter_histogram	[_draw_="c 7 -#000000 B 4 571.31 170.68 559 148.85 525.62 89.66 509.69 61.41 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 512.01 60.53 506.43 55.63 507.74 62.94 ",
		pos="e,505.69,54.317 571.31,170.68 559,148.85 525.62,89.658 509.69,61.407"];
	alignment_workflow -> bam_to_cram	[_draw_="c 7 -#000000 B 4 604.45 170.5 627.13 163.73 659.05 154.2 683.59 146.87 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 684.15 149.26 690.16 144.91 682.75 144.57 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 669.5 155.6 0 19 3 -bam ",
		label=bam,
		lp="669.5,157.5",
		pos="e,691.61,144.48 604.45,170.5 627.13,163.73 659.05,154.2 683.59,146.87"];
	index_cram	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 660.5 80.5 660.5 99.5 779.5 99.5 779.5 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 720 87.5 0 103 19 -samtools index cram ",
		height=0.27778,
		label="samtools index cram",
		pos="720,90",
		rects="660.5,80.5,779.5,99.5",
		width=1.6528];
	bam_to_cram -> index_cram	[_draw_="c 7 -#000000 B 4 720 125.71 720 120.59 720 113.85 720 107.67 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 730.5 110.6 0 21 4 -cram ",
		label=cram,
		lp="730.5,112.5",
		pos="e,720,99.265 720,125.71 720,120.59 720,113.85 720,107.67"];
	index_cram -> aligned_cram	[_draw_="c 7 -#000000 B 4 720 80.71 720 75.59 720 68.85 720 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 722.45 62.78 720 55.78 717.55 62.78 ",
		pos="e,720,54.265 720,80.709 720,75.593 720,68.848 720,62.666"];
	fastq_to_bam -> alignment_workflow	[_draw_="c 7 -#000000 B 7 324.35 217.73 358.38 212.34 408.9 204.46 453 198 469.77 195.54 487.85 192.99 504.84 190.64 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 504.99 193.09 511.58 189.7 504.31 188.23 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 462.5 200.6 0 19 3 -bam ",
		label=bam,
		lp="462.5,202.5",
		pos="e,513.08,189.5 324.35,217.73 358.38,212.34 408.9,204.46 453,198 469.77,195.54 487.85,192.99 504.84,190.64"];
}